mRNA_C-linearis_contig11.1214.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1214.1
Unique NamemRNA_C-linearis_contig11.1214.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A6H5KI74_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI74_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 9.460e-48
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 2 
Query:  131 MSRGGRGDSE-RGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRPDGGGGGGEG 466
            MS G  G S+ RG+GPPNIDGMVTLKVDNIA+TC+ EELR+VFE  GKLGDVYIPRDMRTG+PRGFAFVRYL++RDADDA+DRLDG R NGRELRIQYARKRRP GGG GG G
Sbjct:    1 MSYGRHGGSDQRGSGPPNIDGMVTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADDAVDRLDGTRFNGRELRIQYARKRRPGGGGSGGYG 113
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A6H5KLI3_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLI3_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.610e-38
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 2 
Query:  161 RGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRPDGGGGGGEG 466
            RGNGPPNI+GM+TLKVDN+ Y  ++++LR +FE+ G+LGDVY+PRD+RTG+PRGFAFVR+++QRDADDAIDR+DGE   GRELRIQYA+KRRP+  GG G G
Sbjct:   16 RGNGPPNIEGMITLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRMDGEFFAGRELRIQYAKKRRPEASGGYGGG 117
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: D8LGH4_ECTSI (Serine/arginine rich splicing factor, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGH4_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.580e-34
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 2 
Query:  191 MVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRP 439
            MVTLKVDNIA+TC+ EELR+VFE  GKLGDVYIPRDMRTG+PRGFAFVRYL++RDAD A+DRLDG R NGRELRIQYARKRRP
Sbjct:    1 MVTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDRLDGTRFNGRELRIQYARKRRP 83
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A835ZAC4_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC4_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.160e-30
Identity = 58/95 (61.05%), Postives = 76/95 (80.00%), Query Frame = 2 
Query:  158 ERGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRPD 442
            ER   PP+I GM+TLKVDNI +  T +E+R VF++ G++GDVYIPRD  TGDPRGFAFVRYL+  DA++A+  +DG+ L+GR LRIQ+A +RRPD
Sbjct:    3 ERTYNPPDISGMITLKVDNITFRTTADEVRRVFDKYGEVGDVYIPRDKATGDPRGFAFVRYLDNHDAEEALTAMDGKELDGRTLRIQFAMQRRPD 97
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A6S7FVA8_PARCT (Serine arginine-rich splicing factor 2 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7FVA8_PARCT)

HSP 1 Score: 121 bits (303), Expect = 9.250e-28
Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 2 
Query:  158 ERGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRP 439
            +RG GPPNI+GM +LKVDN+ Y  TV++L+ VF   G +GDVYIPRD RT   RGFAFVR+ E+RDA+DA+DR+DG  L+GRE+R+Q A+  RP
Sbjct:    4 DRGRGPPNIEGMTSLKVDNLTYRTTVDDLKKVFRAYGDVGDVYIPRDARTNQSRGFAFVRFFERRDAEDAMDRVDGSVLDGREIRVQNAKYGRP 97
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: UPI000A1D17A4 (serine/arginine-rich splicing factor 2 n=1 Tax=Drosophila serrata TaxID=7274 RepID=UPI000A1D17A4)

HSP 1 Score: 120 bits (301), Expect = 1.860e-27
Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 2 
Query:  131 MSRGGRGDSERG-NGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRP 439
            MS GG G    G   PP IDGMV+LKVDN+ Y  T E+LR VFER G++GD+YIPRD  T + RGFAFVR+ ++RDA+DA+D +DG  L+GRELR+Q AR  RP
Sbjct:    1 MSNGGSGGGLGGARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYGRP 104
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A7S3XQ99_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ99_HETAK)

HSP 1 Score: 122 bits (307), Expect = 2.510e-27
Identity = 60/111 (54.05%), Postives = 83/111 (74.77%), Query Frame = 2 
Query:  152 DSERGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRPDG--------GGGGG 460
            D   G GPP+I G+ TLKVDNI++ C +++LRD+FE+ G +GDVYIPRD RT + RGF FVR+ ++RDA+DA+D +DG+R++GRELR+ +A + RPD         GGGGG
Sbjct:   18 DYAPGQGPPDIKGLHTLKVDNISFRCQLDDLRDMFEKYGDIGDVYIPRDHRTQEGRGFGFVRFHDKRDAEDALDAMDGKRVDGRELRVAFAERDRPDNPRKYFTTRGGGGG 128
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: UPI0018CEEA47 (serine/arginine-rich splicing factor 2 n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CEEA47)

HSP 1 Score: 119 bits (299), Expect = 2.870e-27
Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 2 
Query:  131 MSRGGRGDSERGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRP 439
            MS G  G S     PP IDGMV+LKVDN+ Y  T E+LR VFER G++GD+YIPRD  T + RGFAFVRY ++RDA+DA++ +DG  L+GRELR+Q AR  RP
Sbjct:    1 MSHGNSGSSSN-RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRYYDKRDAEDALEAMDGRMLDGRELRVQMARFGRP 102
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A0L7LH48_9NEOP (SR-protein (Fragment) n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LH48_9NEOP)

HSP 1 Score: 117 bits (293), Expect = 3.650e-27
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 2 
Query:  164 GNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRP 439
            G  PP IDGMV+LKVDN+ Y  T E+LR VFER G++GD+YIPRD  T + RGFAFVR+ ++RDA++A+D LDG  L+GRELR+Q AR  RP
Sbjct:   13 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALDSLDGRMLDGRELRVQMARYGRP 104
[Close]
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Match: A0A194QB33_PAPXU (Serine/arginine-rich splicing factor 2 n=1 Tax=Papilio xuthus TaxID=66420 RepID=A0A194QB33_PAPXU)

HSP 1 Score: 119 bits (298), Expect = 4.130e-27
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 2 
Query:  164 GNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGDVYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARKRRP 439
            G  PP IDGMV+LKVDN+ Y  T E+LR VFER G +GD+YIPRD  T + RGFAFVR+ ++RDA+DA+D LDG  L+GRELR+Q AR  RP
Sbjct:    4 GRPPPRIDGMVSLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALDSLDGRMLDGRELRVQMARYGRP 95
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI74_9PHAE9.460e-4880.53RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KLI3_9PHAE1.610e-3869.61RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LGH4_ECTSI1.580e-3484.34Serine/arginine rich splicing factor, putative n=1... [more]
A0A835ZAC4_9STRA7.160e-3061.05RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6S7FVA8_PARCT9.250e-2860.64Serine arginine-rich splicing factor 2 n=2 Tax=Alc... [more]
UPI000A1D17A41.860e-2759.62serine/arginine-rich splicing factor 2 n=1 Tax=Dro... [more]
A0A7S3XQ99_HETAK2.510e-2754.05Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
UPI0018CEEA472.870e-2759.22serine/arginine-rich splicing factor 2 n=1 Tax=Tel... [more]
A0A0L7LH48_9NEOP3.650e-2761.96SR-protein (Fragment) n=1 Tax=Operophtera brumata ... [more]
A0A194QB33_PAPXU4.130e-2763.04Serine/arginine-rich splicing factor 2 n=1 Tax=Pap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1055909..1063627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score157.1
Seed ortholog evalue1.1e-35
Seed eggNOG ortholog2880.D7FM62
KEGG koko:K12891
KEGG Pathwayko03040,ko05168,map03040,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.regulation of RNA splicing
EggNOG OGsKOG4207@1,KOG4207@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-16_004040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Exons7
Model size2155
Cds size825
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927439.7259412-UTR-C-linearis_contig11:1055908..10571081622927439.7259412-UTR-C-linearis_contig11:1055908..1057108Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1055909..1057108 -
1690879701.1351552-UTR-C-linearis_contig11:1055908..10571081690879701.1351552-UTR-C-linearis_contig11:1055908..1057108Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1055909..1057108 -
1622927439.8277879-UTR-C-linearis_contig11:1061535..10615901622927439.8277879-UTR-C-linearis_contig11:1061535..1061590Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1061536..1061590 -
1690879701.2197518-UTR-C-linearis_contig11:1061535..10615901690879701.2197518-UTR-C-linearis_contig11:1061535..1061590Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1061536..1061590 -
1622927439.840937-UTR-C-linearis_contig11:1063552..10636271622927439.840937-UTR-C-linearis_contig11:1063552..1063627Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1063553..1063627 -
1690879701.2425194-UTR-C-linearis_contig11:1063552..10636271690879701.2425194-UTR-C-linearis_contig11:1063552..1063627Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 1063553..1063627 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927439.7433817-CDS-C-linearis_contig11:1057108..10572101622927439.7433817-CDS-C-linearis_contig11:1057108..1057210Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1057109..1057210 -
1690879701.155306-CDS-C-linearis_contig11:1057108..10572101690879701.155306-CDS-C-linearis_contig11:1057108..1057210Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1057109..1057210 -
1622927439.761079-CDS-C-linearis_contig11:1057508..10579431622927439.761079-CDS-C-linearis_contig11:1057508..1057943Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1057509..1057943 -
1690879701.1743412-CDS-C-linearis_contig11:1057508..10579431690879701.1743412-CDS-C-linearis_contig11:1057508..1057943Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1057509..1057943 -
1622927439.7738574-CDS-C-linearis_contig11:1058377..10585341622927439.7738574-CDS-C-linearis_contig11:1058377..1058534Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1058378..1058534 -
1690879701.1850972-CDS-C-linearis_contig11:1058377..10585341690879701.1850972-CDS-C-linearis_contig11:1058377..1058534Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1058378..1058534 -
1622927439.7868097-CDS-C-linearis_contig11:1060222..10602901622927439.7868097-CDS-C-linearis_contig11:1060222..1060290Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1060223..1060290 -
1690879701.1932929-CDS-C-linearis_contig11:1060222..10602901690879701.1932929-CDS-C-linearis_contig11:1060222..1060290Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1060223..1060290 -
1622927439.8040447-CDS-C-linearis_contig11:1060837..10608701622927439.8040447-CDS-C-linearis_contig11:1060837..1060870Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1060838..1060870 -
1690879701.2010574-CDS-C-linearis_contig11:1060837..10608701690879701.2010574-CDS-C-linearis_contig11:1060837..1060870Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1060838..1060870 -
1622927439.8178952-CDS-C-linearis_contig11:1061505..10615351622927439.8178952-CDS-C-linearis_contig11:1061505..1061535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1061506..1061535 -
1690879701.2091715-CDS-C-linearis_contig11:1061505..10615351690879701.2091715-CDS-C-linearis_contig11:1061505..1061535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1061506..1061535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1214.1prot_C-linearis_contig11.1214.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 1057109..1061535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1214.1

>prot_C-linearis_contig11.1214.1 ID=prot_C-linearis_contig11.1214.1|Name=mRNA_C-linearis_contig11.1214.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=275bp
MSRGGRGDSERGNGPPNIDGMVTLKVDNIAYTCTVEELRDVFERSGKLGD
VYIPRDMRTGDPRGFAFVRYLEQRDADDAIDRLDGERLNGRELRIQYARK
RRPDGGGGGGEGGGYGRGGGGYGGGGGGYGGGGGGGYGGGRYGGGGGRDD
RGGRSRSPRRRSKSRSPPPRRRRSRSRSRSPRSPPAADKKERRQRRSRSA
SPREAPSRERRSRSRSGGRGSGGDLKEERNGKDERNGGDRKSHRDDDAGR
GERRSGRGAPKHGEDDGSPAHADA*
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mRNA from alignment at C-linearis_contig11:1055909..1063627-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1214.1 ID=mRNA_C-linearis_contig11.1214.1|Name=mRNA_C-linearis_contig11.1214.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7719bp|location=Sequence derived from alignment at C-linearis_contig11:1055909..1063627- (Chordaria linearis ClinC8C monoicous)
CCCGCCGCCAGCGACACCGACACCGACGTATATATCTACTGTGCGTTCCC
GCCTCTCTCTATCCAGCCTTCGTAGGTGAGTGGTCCTGGGTGAAAAGAGA
GGGACAGGGGCCTGTGGATTAGCTTGTGGCGGGGGACGTGTCGTGCGGTG
GCCTACTCCTTCACAAACAATAGCAAAGCGTCTCTGTATTGCTGTTGTAA
GGGCCACCCGCTCTCGTTTTTGACGATTCTGGCTGCTTTTGGATCTAGGT
CGCCTCCTGACCCGAGCTTGGTAGGTTTAAGGCACGTACTGTATCCTAAT
CCTTCGAGATGTTTGTGCGTTGTGTCTCGGGTGTGTCCTTGGTTGGGCGA
TTGTTGGCAAAATTAAATCACACAAAAAGCCAGCACCAGCTGTTCGAGGA
CGAACACGTATTGAAACATTGAAACGGAAGGTAGGTGGGGCCGCGCGTCT
TGTTTGTTTAGGCGGCTGTTGCGTGTTCAATTGTTCAATCTTTGCGCCGT
TGGTAATTAGGTTTTCCCATCGCCATTGGTGATATTGGGCCGTGTTGCCT
CGCCTCTCGGCGCCGTTATCATGATATGTGGAAAAATTATGAGCGTACAG
CAGTATCTTTCTGCCCACGGAAAAGGCAAAAAGGTGGAAACCGAGCAGAT
GAGGAGAGGAAAGAGAGATGATGGAGAGAGAGTAAGCGATGACCCACCTA
TGGTACTGCTGCGTCCACGAGCGCATGGATCGGGGAAGGGTGTGTGTGCG
TGTGTGCGTGTGTGTGTGTTTTTTCGTCCCATTTATTTTGGCGACAGTCC
CTTTCCGATCAAGGTGAGACGTGTACTACACGTTGCCGTGGTTAGAGTAC
TACACTCGTTCAGTGTAGTTTTCTGTACAACAACTAGAACCGGGGTCGGT
CACACAACAGGAGGAGGGGGTAAACACTGGAGCCTTTTTCTTCTTTTAAT
TTTTCTGTTTGTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGACTTGGA
TTTTATCGCGAGAAGGGTGCAGCCATCCCTTTCCCTCGTCAACGTGCTAA
GTCGAAGTTTGGTACTCACGAGCTTTTTCAGCTATGCTATCGCTTTCACC
TGCAAAGTCGCAAAATAATCCCCTTTGCTTATAATTGAACTCCAGACTTT
GCTGCTAGTGGGTTCGAGGTTAAACCACTAGTCCACCGGGGCGACCGGCT
GGTGCTATTTGTTATTTGTCCGCACATTTTGTAGTTTCTCCGCCCACTAC
AAGAATACCGTCCCAGTTCTACGTTTTCGCAGTTAACTGCTGTGAAGCAG
CGAACGCATTTCGTGAAGACTGCTGTCGACGAGACAACGGCCGACCAGGT
AGATCGACCACTGCCACTCTTCACTCTCACCCTTTTGTATACATGAAAAC
GGCATCAAAGAAAGAACCTCTCTCAAAGAAACAAATCCTTAAGTGGTGGA
TAGTTCAATACAGCAGCAGTGACGTACTGGTATATGGTATTATGGGATAG
GTGGAGAACAAAAAACAGCAACCTGACGATGTCTACCCCTCGATTTGTCC
CTATTTCTGAGAAATTGTCTACCAGTATGTAATACCACAGCTTCATGACG
GGGCACCCCCCGATATATTTTGCTTTTGACCCGGCAGAGAGTTGCCGGGG
AGGTTATTGCCCACCTGTATCCCATACTATGTCACTGCTGTATTGAACTG
TTAATCCACCGCTTAGAGATTTGTCTCTTTGACGGGAGGTTCCTCGTTTG
ATGCCGTTTTGTTAAATAAAAACACACATAAAACGTAAAGCTTGGAGAAA
GTTAAAATGTCTCTCCGCCGCGGGTCAACAGGCAAATATATCGGGGAGAA
ACCCACCGTACAGCGGTTTTGGATTGTACCGAGGTATTATAAATAACTTC
TCCGAAATACGAACACCCGTTGGGAAAGACTGCTGTCGAGGAGACAACGA
CCAACCAGGTAGACCGACCGCTGCCACTCTTCCCCTTTCACCTTTTCACT
GCTGTCTGTCCACCCTTTTCCTCGTTGGCCGTTCCAGAAAAACTGCATAA
ATACTGCTCGTACCCCCAAGAGACCCGAAGACGAGACACAACATGAGCCG
CGGTGGACGTGGAGACTCGGAGGTGAAGAAGGACAATATTATGTTGGCGG
CGATCTGCGGAAATAAAGGAGCGCGCGAAGCACCCATTAGTCCACATCGG
TTTTGCCCTGTGCGCACAGCTACTTACATACTCAAGTGTAGGAGTATACC
GCTATGTAGGAGATGAAATCGGATCAGGGTTAGCTGCCGTTCGTAGGCGG
ACATAGGGGGTGAACGAAACAACAAGCCGTTCTGTGGGGAACTCGGGAAC
TCGGCGGATGGTCATGGTTGTCAGGCAGACGCAGCGGCGAGCGATAGCGA
TAGCGATCGACGCTGTCTTGTCGCGGGCTGCAAGCGAAGCTTGCTCGCGG
CCTGTGGTCTCGATTGGCCGTCGTCTGCGCGGCAGTCGATTTAGCTTGTT
GGGCGCCGCCATGTGCTTTTTTTTCGTCGGAACAGAAGTGGAGCCAACGA
TGGCTTGGTCGTGGAAAGTGGAAAATGGAAGATGGAAGATGGAAGATAAG
AACCGCAACCGTGCCCCTCGTCGTTTGGTATACTGACTCTTCTCGTGTAC
CCGTATCCCGCGCTCTTGTTCGCGGTCGACCGCCCGCCCTTTCGGCCTGG
TGGCGTGGCGCACTGCCTGCTTTTGCTGGAAACCACGTCCGTTTCGTGCT
CGAAAAGAGGGGCAACGGGCCTCCCAACATCGATGGAATGGTGAGTACAT
AAACCACGTACCCCGTTGTTTGTAGAAGCAGGCTGTTTTCTTTCTTGCGT
CGGGTCGTGTGTGGTGCACGATCTCCTCTTTGGTGCTGCATTACAAGTAG
CGGCTGTGTGGAAAGTTAAAGTTAAAGTTTCCTCGAAGCGGCGGCTGTGC
GGAAGTTGAAGTTAAAGTTTCCTCGAAGCGGCTGTGTGGAAAGTCAAAAG
TTAAAGTTTCCTCGAAAGCGCACCGGGAGAACAAACAGCCTTACAACACG
GATGCAATGCAACCAGTATTGTATGTCGCCGTACGAACGACGGCGGCACC
GTGTTGAGTCACGCCCGGCCCAACCACGAAAGGCGGAGCACCAGCGGGCG
GACGGTTCTCCTCCCCCTCCTGTCAGCCATCCCATTGATCATGCGAACGT
TTAGGCCGCCCCAACCATTTTTTTTTTGTTTTCCCCGTTTTTGTTTGTGT
TGTCCCAAAAATAAAATTTTACCGTGGCTGTGGCTGTGGCTGTGTGTGTG
TGTACGCGTGTGTTTGATGCTCTGTTTTCTGTTGTAGGTGACGCTGAAGG
TCGACAACATCGCTTACACGTGCACCGTGGAAGAGTTGCGGGATGTCTTC
GAGCGGTGAGAGAGCGAGCGCATCAGAACCATGCACGACAAAGCAACTCT
CCGCTAAAAACCTTGAAAGTTCTCGGTGTCTATGTGTGGTTAAGAAGAAA
CACGATAGAAAGTACGCCACTAACCCCAACAACTTTTGATAGTGGTTAAA
TGTTACGGGCCATTTGTGTAGTTCTCGCCGAAGAATTATGCCGCTTGTCG
TTGAGGCCGTCACTCACCTCCTTGTTTTTTTTTTGTTTGTGTGTTTTGAT
GTCGTGTGTGGTGTAACATCTGTGTTTCGTTTGTCGAACGTGAAGTGAAG
GGTAAGAGAAGAGAAGAGAAATAAGCGTTTCGGCCGCTGTCTTGAGCAGG
TTTTGTCAGTGAAGGGCGAATACGCAAGCCGAAGTGCATGCGGGAGTAAC
GCAACTGACCGTGCCGCTAATGTTACTATTTTGCGCTCGCGGTGGAGACA
GATTGCACACAACAAACACATAGAAACAGAGAGAAAGAGAGAGAAACGGA
GAAACAGAGAGGTGACATGTCACGAGTGGCAGAAAATCGAGCCGAGATCG
GAGATGATTGCGTTCCTGCCGAGGCTAGTCCGTCAAGGCGTGCAGTATGG
GGTCGTGGAGGGGCGGAGATGTGCATCACGGTACCGAGACGGGAAGGGGC
GAGGGCGCTGAACAACACTCCCACGTTCGAGTTTACCGTTGCGAGCTTTC
CGAGAAACCAGCCTACCACCCGGGACACAGGGCAAGAAGAAGTCGCGCGC
GCACAGACGGTCATTCAGAGGAGAAAGGCGTCTCGCTGTCACAGAGAGGG
AGGGAGGGAGGGAGGGAGGGGGGGGAGGAGGTCGAGAAAGTCGAGACGAG
AAGAAACTAGGGCTCATTCCCCCCGCCGTACGAGAGAGTATTCACCCCAG
TCAAAAGAGAGAGAGACGGAAGGGATGAAGAGAGCACGAGCCCTCCGCTT
TATCCAGAAAGCACCACGCGAGAGAGGGAAAAGAACGCGGCACAGCAGGG
GGTGTTCCTGTCGCGCTCGAGAGCTAGGGTTTCCTGTCAGGGGTTTCCTG
TCAGGGTACGAGGCAGAGGCTTGTCGGGGGCTCCTATAGGGGTCTTCTAC
ACCTTCCCGCTGTTTCCGAGATTCCTTCCTCCAGCGCAGCTGCCAAGCCT
TCGGTTCGCGTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTC
GTGCCCTCCTCCTGGCGTGCCTGCCCAACCCCGTTGCTGTCTACTACCCT
ACGCTTCCAACCACCGACCTGTGCTGCTGCTGTACCCGTCCCAGAACTCT
GTCGTGCCACGGTGGGTTGGGTCGGTATAGGTGGTGTTGTGGGTGAAATG
GTAATGTTCCAGGTGCGGCGAAGAAGCGGGTATTGGAGGTTTACTACGAG
GTTCGGCCAGTTCTGTTTTCTCGCGTGCGTTCCTGGTTAATGACGGGGTT
GGGGGCCGAAGCTTGTGAGGAAGCGAGGCACCACCACAGCTGGAGGAGAG
GAGAGGGCGTGCGTGTGTCTTGTTGTACAGGCACTTTATTTGATCACGGA
GTTGGCCATCCACGACCTCTTCGGTTTCGTTTTATCGTCCAAGTGTTCTC
GAGCCCCCCTCATTGACGGACCCAGTCGTGGACTGCTGCTGTTGTCTTGT
CTACGCGTGTGTGTGTTTTTCAAATTCTAAACAACAAATACAGGTCGGGA
AAGCTCGGAGATGTTTACATCCCCCGCGACATGAGGACGGGCGACCCGCG
CGGCTTCGCCTTCGTGCGGTACCTGGAGCAGCGAGATGCCGACGATGCGA
TTGACAGGCTCGACGGGGAGAGGCTGAATGGCCGCGAGCTCCGGATCCAG
GTACGTACTGCTCCAAACGTGGCGCGCCTGTTTGCCAGCTGAGAGCCGAT
CACAACAACGAGGGGCCGAGCACTTCCCTCGTGGTTGGTGCTTGCTTGGC
GATATACTTTATACGTTGGGGCATTTGGGTAGACAGGAAATGTGTATACT
CACCAGACTTCACTACGGGGCCCCTTTCGGCTGTTTTCGCGAACAACGTC
TTTTGCAGCCCCGTTCCCACGATGCTACATACCGACTCGTGGCTTGCAAA
AACAGCTCACGCGCGACTCAGCTATTTACCACACTTGCGTGTTGCCATAC
GAGCCCTCCTGATGCTGTCTGCATCCAACCCATCTCTTGCCCTTGTCTCT
TCCTCCACCTCACCGCTGCAACCATGTACTGTCTGCGTGCGTGTTGCTCT
TTCTCCTCGCTTCTGAAACGGCACCACTCTCCAGTATGCCCGCAAGCGCC
GTCCGGACGGCGGCGGCGGCGGCGGTGAAGGGGGCGGGTACGGCAGGGGC
GGAGGCGGGTACGGCGGCGGCGGTGGTGGCTACGGTGGCGGCGGCGGTGG
GGGCTACGGGGGCGGCCGTTACGGGGGCGGCGGCGGCCGCGACGACCGGG
GTGGCAGGAGCCGCTCCCCCCGCCGCAGGTCCAAGAGCCGCTCCCCCCCT
CCCCGCCGCCGCCGCAGCCGCTCCCGCTCCCGCTCGCCGCGGTCACCGCC
GGCGGCGGACAAGAAGGAACGGAGGCAGCGCCGGTCCCGCTCGGCCAGCC
CCCGGGAGGCGCCCAGCCGCGAGCGGAGGAGCAGGAGCCGCAGCGGGGGC
CGCGGCAGTGGTGGTGACCTCAAGGAGGAGAGGAACGGCAAGGACGAGAG
GAACGGCGGCGATCGCAAGGTACGGGTCCTCGTTTTTTCGCGTGTTTAGG
CTTTTTTTGGGGGGGGGAGGGCGGGCCGAGGAGTGGATCCATAAAACGGT
CTGCTTTCCCGTGGATGGTGTCACTTTTTGCGGCGCGTGCTGCCTCCTGA
GGCCCCTACGGGTGTGATACTCAACCCAAACCTTCCGTTATTTTCTTCGT
ATTTACCGCGTACGTACTTCCCCTGGTCTCTCCCACGCTGCTTGTGTTTA
TAACGCCGCCTTCCTCTCTGTTCGGCTGTCTTCTGCCGCGCAAAAAAACT
TGCGCGCGGTTGTGTAGAGCCACAGGGACGATGATGCCGGCAGGGGAGAA
AGGCGCAGTGGCCGCGGAGCCCCCAAGCACGGAGAAGATGACGGCTCGCC
GGCCCACGCTGATGCCTAGAACGAGCGCAGGCAGATATTTGTTGCGGGCA
ATGCAGAACGAGGCGCAACACCGCTGCTTGTAGTGCCTCTCAAAGGCTGG
AGCCTCGGTGGAGACTGCTGTATTAGGTTCTTCGATAGTTGATACGTAGT
ACTCTTCTACTCCCGGTCGTCGGTTGCCGTTTTCTTCAGGGGTCTGCTCT
GCGTCATGTTGCGTCGTCCCCATGGCTTCATGTTGCGTCGCCCCCATGGC
TGAACGAAAGGCACAAGGGGACGCTTTGAAACCGCCTTCCCTCTCTCTCC
CTGCACGTAGGATACCACGTGTGTAGCAGTGAAGCGTTGCCTCGAATTAT
CCACTACTGTATGTCGCCAGACTTTTTTTGTCAAAAAGCACAAGAATGGG
GGTATGAAACGCCGCGATTTTTTTGGTGAATGAGGGATGCCTCGGTCGGT
TCCAAAAACGGCGTCCACTTTGAAGGAGCGGGTTCGAAGGGAGTGAGTCG
ATTTGGACATATTCCGGGCTAGGGGGATGGTCTATCCTTCGATTGCGGAG
GCAGTAGTAGGTGGCGTCGGCTTCTTGTGCTTGCAAATGAAGTCCATCCA
CAGACACGCACAAAAGTAGCGGCGAGGCAGGGGGTGTCGTGAGGAAGAGG
CGGGGGGGGGTATGATTTTGTTTCGAGGCCGGTGTTCGGTAGATGAGAGC
TTTGTAGAGCCCCGCGACAGAAATCGAGAAACCCCGAGAAGAAAAGAGGC
CCAGGGCCTGTGGTGAAAAAACGGGGTAATTGAGGGGGCGCGGGAGGTGG
GGTGGAATGCAGCGCGAAAAGTAAGCGCCTCCATGAAATCAATAAATCAA
TGCCGACACAAAGGAGTTTTGGGATTTTTTGGCTTGAAATGAGGGAACGG
GGGAAGCGGAGTCATTTGACTCTGCTGACGGGAGACGACGCTCCCGTTAG
TTACTGCTCTTGGTGCAGCACGTTCGTTGACTTGTGACCAGGTCTAACCT
CCCCGCCAAACATCGAGGCGCGCATTACAACTACTTCTGTTGCACCGCGG
GCCGCGGGCCATCCGTATTATGTTCCCTGCGCTAGAGGTTGACTGCTGCT
GTCCTCATGAGGGGGTCGGGGTTGTTTCAAGAATCGTGGTTTGTTGCCTG
TTTGCCTGATTTGGATCTGCGAACTCAACACGCGCCGCCACATGAGATGA
GGCAGAAGTCCGTTTTCCG
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Coding sequence (CDS) from alignment at C-linearis_contig11:1055909..1063627-

>mRNA_C-linearis_contig11.1214.1 ID=mRNA_C-linearis_contig11.1214.1|Name=mRNA_C-linearis_contig11.1214.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at C-linearis_contig11:1055909..1063627- (Chordaria linearis ClinC8C monoicous)
ATGAGCCGCGGTGGACGTGGAGACTCGGAGATGAGCCGCGGTGGACGTGG
AGACTCGGAGAGGGGCAACGGGCCTCCCAACATCGATGGAATGAGGGGCA
ACGGGCCTCCCAACATCGATGGAATGGTGACGCTGAAGGTCGACAACATC
GCTTACACGTGCACCGTGGAAGAGTTGCGGGATGTCTTCGAGCGGTGACG
CTGAAGGTCGACAACATCGCTTACACGTGCACCGTGGAAGAGTTGCGGGA
TGTCTTCGAGCGGTCGGGAAAGCTCGGAGATGTTTACATCCCCCGCGACA
TGAGGACGGGCGACCCGCGCGGCTTCGCCTTCGTGCGGTACCTGGAGCAG
CGAGATGCCGACGATGCGATTGACAGGCTCGACGGGGAGAGGCTGAATGG
CCGCGAGCTCCGGATCCAGGTCGGGAAAGCTCGGAGATGTTTACATCCCC
CGCGACATGAGGACGGGCGACCCGCGCGGCTTCGCCTTCGTGCGGTACCT
GGAGCAGCGAGATGCCGACGATGCGATTGACAGGCTCGACGGGGAGAGGC
TGAATGGCCGCGAGCTCCGGATCCAGTATGCCCGCAAGCGCCGTCCGGAC
GGCGGCGGCGGCGGCGGTGAAGGGGGCGGGTACGGCAGGGGCGGAGGCGG
GTACGGCGGCGGCGGTGGTGGCTACGGTGGCGGCGGCGGTGGGGGCTACG
GGGGCGGCCGTTACGGGGGCGGCGGCGGCCGCGACGACCGGGGTGGCAGG
AGCCGCTCCCCCCGCCGCAGGTCCAAGAGCCGCTCCCCCCCTCCCCGCCG
CCGCCGCAGCCGCTCCCGCTCCCGCTCGCCGCGGTCACCGCCGGCGGCGG
ACAAGAAGGAACGGAGGCAGCGCCGGTCCCGCTCGGCCAGCCCCCGGGAG
GCGCCCAGCCGCGAGCGGAGGAGCAGGAGCCGCAGCGGGGGCCGCGGCAG
TGGTGGTGACCTCAAGGAGGAGAGGAACGGCAAGGACGAGAGGAACGGCG
GCGATCGCAAGTATGCCCGCAAGCGCCGTCCGGACGGCGGCGGCGGCGGC
GGTGAAGGGGGCGGGTACGGCAGGGGCGGAGGCGGGTACGGCGGCGGCGG
TGGTGGCTACGGTGGCGGCGGCGGTGGGGGCTACGGGGGCGGCCGTTACG
GGGGCGGCGGCGGCCGCGACGACCGGGGTGGCAGGAGCCGCTCCCCCCGC
CGCAGGTCCAAGAGCCGCTCCCCCCCTCCCCGCCGCCGCCGCAGCCGCTC
CCGCTCCCGCTCGCCGCGGTCACCGCCGGCGGCGGACAAGAAGGAACGGA
GGCAGCGCCGGTCCCGCTCGGCCAGCCCCCGGGAGGCGCCCAGCCGCGAG
CGGAGGAGCAGGAGCCGCAGCGGGGGCCGCGGCAGTGGTGGTGACCTCAA
GGAGGAGAGGAACGGCAAGGACGAGAGGAACGGCGGCGATCGCAAGAGCC
ACAGGGACGATGATGCCGGCAGGGGAGAAAGGCGCAGTGGCCGCGGAGCC
CCCAAGCACGGAGAAGATGACGGCTCGCCGGCCCACGCTGATGCCTAGAG
CCACAGGGACGATGATGCCGGCAGGGGAGAAAGGCGCAGTGGCCGCGGAG
CCCCCAAGCACGGAGAAGATGACGGCTCGCCGGCCCACGCTGATGCCTAG
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