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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 653 |
| Cds size | 651 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927425.5088172-CDS-C-linearis_contig11:1045390..1045753 | 1622927425.5088172-CDS-C-linearis_contig11:1045390..1045753 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 1045391..1045753 + |
| 1690879693.247958-CDS-C-linearis_contig11:1045390..1045753 | 1690879693.247958-CDS-C-linearis_contig11:1045390..1045753 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 1045391..1045753 + |
| 1622927425.517641-CDS-C-linearis_contig11:1046986..1047274 | 1622927425.517641-CDS-C-linearis_contig11:1046986..1047274 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 1046987..1047274 + |
| 1690879693.2678938-CDS-C-linearis_contig11:1046986..1047274 | 1690879693.2678938-CDS-C-linearis_contig11:1046986..1047274 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 1046987..1047274 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1212.1 >prot_C-linearis_contig11.1212.1 ID=prot_C-linearis_contig11.1212.1|Name=mRNA_C-linearis_contig11.1212.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=217bp
AAARQTERQGAIATTVCVHTHKKTNNRLRKTKLNQLTRQAVLACRPFSKG
QEVCVSGAKREKERHRSIQIMRCSRRRRGSSTTVAAAVVLAACLGRGTGS
SPGYPGEVGGGAALPHRPGQPPSGGFSQQQYQQQQQQQQQQYRPGAGAGT
GQGRTPPSAGSTGPPGGVGGAGAPGGGPPSQQAMYRRGGPVGQQQGGPPP
GYRGSPPTQYGGGGGGG back to topmRNA from alignment at C-linearis_contig11:1045391..1047274+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig11.1212.1 ID=mRNA_C-linearis_contig11.1212.1|Name=mRNA_C-linearis_contig11.1212.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1884bp|location=Sequence derived from alignment at C-linearis_contig11:1045391..1047274+ (Chordaria linearis ClinC8C monoicous)
GCGGCAGCGCGGCAGACAGAGAGACAAGGGGCAATAGCGACTACTGTGTG
CGTGCACACCCACAAGAAAACCAACAACAGGTTACGGAAAACCAAGCTGA
ACCAGTTGACTCGCCAAGCTGTTCTAGCGTGCCGGCCTTTCTCGAAAGGC
CAAGAGGTGTGTGTGTCCGGAGCAAAGCGAGAGAAAGAGAGACATAGATC
AATCCAAATCATGAGGTGCTCGAGAAGGCGCAGAGGGTCCTCTACGACCG
TCGCCGCGGCTGTCGTGCTGGCCGCATGCCTGGGACGGGGAACCGGTTCG
TCGCCGGGATACCCAGGAGAAGTTGGTGGCGGGGCCGCGCTGCCTCACCG
GCCAGGACAGCCGGTGAGAGAGAGAGAGTGTTGGTGTTTAGAGCCCGGTT
TAGGGACAGATGTACATGTGCGCATTTCACTTGTGTTGTGTGCAGATGCC
CCCCCGGCCAAAGCGGTTGCTGTTGCTCTGGAGCTTTGTTGGATCAGCCG
CACCGCATCGCAGAAGCTTGTGTTGCGGCTTGGCTAGTCTTAGGATGCTC
CCCTGTGTAAAGCTGGGCGGATGTCCATTTTCTACCGGGTGTGCGGGTTC
TCTTCTGCGTCCCCATAGTTGGGAAGGGTTGCGCGTTCGTATGATATCAT
ACCTGCGGCCGCGGGATCTTGCCTTGTTCGAGCTTCGTCTCTCTCCCTCT
TGTAGTAGAAGCAAAGCACAACTAAGTGCAATTTTTCTCATGGTGTGCAG
CATTCAAGCGATTGGCAGCTCACCGTAGCCAGATGAGATAAATGCAGCCA
ATAGGCCTCACGCTGCTGGATATCGTTTCTGTCATGGATCACACATGTAT
CCCAACACGACCTCAGCCTCGTCGATCAACGGCCATTCTGAGCCGGCACG
TGGCGGCACTCTGCTGCAGCACCACAAACATACTGCTGTAGCAACTTGCA
CAGATCGTTCTTGTGCATTTTCCGTGATACCAAGGAATCATCCTTGGTGT
TGTCTCGCGGAGTGTATGTATGCAGCATGCATTTAGGCTAAGACCCGGCC
ACTGGGCTGGACACACAAGAGCATGCTGCACGCCCGTCGCTTGGAGAAGG
ACGGCATACAATCAAGGAATGTGTAGACAAGGGCTCATTATCTGTGTACA
TCCTGTCCTGTTTCTCTTACTCACTCTAGCTGCAAGCTTCGTGTTTCGTC
GACACTCTCTAGATAGATTTATTCCCCTCCAACTGCTCTGTCCAGGGCAC
ATCAACATCCCCACAAGAATCGGTATCAGAACCTACACGTGTACATGCAT
GAGAGACTGCTCCGGACTCTCGTCAACACGTCAAGCAAGACACACGCATG
TCCGCGGCACGTTCCCTCTCATCACAACGCAGCACAACATCAGGACGCCT
CCTCGCTGCCTCCGTGACAAACAATCGAAGCCTGAAACCGTAGCTGTCAA
GGTGGTATGTCAAGGTGGTATGTACACAGCAGCAGTCTCGTCGCCCACTT
CTCCCAGAAACCCGATTCACCCCCCGCCCCGCACGGCGAAAACCATTGGT
CCCTGGACCCATCCCCTCTCGTTTGTGCGGCCCCATTCACCTACAGCCTA
GCGGAGGTTTTTCCCAGCAGCAGTACCAACAGCAGCAGCAGCAGCAACAA
CAGCAGTACCGACCAGGAGCCGGAGCCGGAACGGGGCAAGGCCGGACACC
CCCCTCTGCAGGATCCACGGGGCCTCCGGGCGGGGTAGGAGGAGCGGGGG
CGCCCGGCGGCGGGCCGCCTTCCCAGCAAGCGATGTACCGGCGAGGGGGG
CCCGTGGGTCAGCAGCAGGGGGGCCCGCCGCCGGGGTACCGGGGGAGTCC
TCCCACGCAGTACGGCGGCGGCGGCGGAGGGGGG back to topCoding sequence (CDS) from alignment at C-linearis_contig11:1045391..1047274+ >mRNA_C-linearis_contig11.1212.1 ID=mRNA_C-linearis_contig11.1212.1|Name=mRNA_C-linearis_contig11.1212.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at C-linearis_contig11:1045391..1047274+ (Chordaria linearis ClinC8C monoicous)
GCGGCAGCGCGGCAGACAGAGAGACAAGGGGCAATAGCGACTACTGTGTG
CGTGCACACCCACAAGAAAACCAACAACAGGTTACGGAAAACCAAGCTGA
ACCAGTTGACTCGCCAAGCTGTTCTAGCGTGCCGGCCTTTCTCGAAAGGC
CAAGAGGTGTGTGTGTCCGGAGCAAAGCGAGAGAAAGAGAGACATAGATC
AATCCAAATCATGAGGTGCTCGAGAAGGCGCAGAGGGTCCTCTACGACCG
TCGCCGCGGCTGTCGTGCTGGCCGCATGCCTGGGACGGGGAACCGGTTCG
TCGCCGGGATACCCAGGAGAAGTTGGTGGCGGGGCCGCGCTGCCTCACCG
GCCAGGACAGCCGGCGGCAGCGCGGCAGACAGAGAGACAAGGGGCAATAG
CGACTACTGTGTGCGTGCACACCCACAAGAAAACCAACAACAGGTTACGG
AAAACCAAGCTGAACCAGTTGACTCGCCAAGCTGTTCTAGCGTGCCGGCC
TTTCTCGAAAGGCCAAGAGGTGTGTGTGTCCGGAGCAAAGCGAGAGAAAG
AGAGACATAGATCAATCCAAATCATGAGGTGCTCGAGAAGGCGCAGAGGG
TCCTCTACGACCGTCGCCGCGGCTGTCGTGCTGGCCGCATGCCTGGGACG
GGGAACCGGTTCGTCGCCGGGATACCCAGGAGAAGTTGGTGGCGGGGCCG
CGCTGCCTCACCGGCCAGGACAGCCGCCTAGCGGAGGTTTTTCCCAGCAG
CAGTACCAACAGCAGCAGCAGCAGCAACAACAGCAGTACCGACCAGGAGC
CGGAGCCGGAACGGGGCAAGGCCGGACACCCCCCTCTGCAGGATCCACGG
GGCCTCCGGGCGGGGTAGGAGGAGCGGGGGCGCCCGGCGGCGGGCCGCCT
TCCCAGCAAGCGATGTACCGGCGAGGGGGGCCCGTGGGTCAGCAGCAGGG
GGGCCCGCCGCCGGGGTACCGGGGGAGTCCTCCCACGCAGTACGGCGGCG
GCGGCGGAGGGGGGCCTAGCGGAGGTTTTTCCCAGCAGCAGTACCAACAG
CAGCAGCAGCAGCAACAACAGCAGTACCGACCAGGAGCCGGAGCCGGAAC
GGGGCAAGGCCGGACACCCCCCTCTGCAGGATCCACGGGGCCTCCGGGCG
GGGTAGGAGGAGCGGGGGCGCCCGGCGGCGGGCCGCCTTCCCAGCAAGCG
ATGTACCGGCGAGGGGGGCCCGTGGGTCAGCAGCAGGGGGGCCCGCCGCC
GGGGTACCGGGGGAGTCCTCCCACGCAGTACGGCGGCGGCGGCGGAGGGG
GG back to top
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