mRNA_C-linearis_contig11.1206.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A6H5K9H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9H3_9PHAE) HSP 1 Score: 371 bits (952), Expect = 5.170e-127 Identity = 202/273 (73.99%), Postives = 226/273 (82.78%), Query Frame = 3
Query: 45 MTDALPEPAQEGTEDDLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGGG--------------RSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGGMFKGGGGSTPVPGKRQLEEAAARARGEGLVDPGRGGGDDDKL-KGGDWWLYVSIAVGVGAFAVAGFAAAKF 818
M DA+ + + TEDDLLTKEKSYLFEER+ETA RLRQLGNERFKRG ME AAEAYERAL+HVDFDELQINFDF+D+HRE+LT AKLPVLLNLCQCLAK GG RS+NAGRAAE+AGQAIELD+TCAKA+FWRGKA+MDAGDL+GS+TDL+EAAKLAP D KP+R ALKSLRIKQKE +AARR LWGG+FKGG TP PG+RQ+EEAAARARGEGL DPGRGGG D + GGD LY SIAVG+ AFAVAGF AAK+
Sbjct: 1 MADAVSQVVEGETEDDLLTKEKSYLFEERLETAGRLRQLGNERFKRGRMEGAAEAYERALHHVDFDELQINFDFSDKHRESLTTAKLPVLLNLCQCLAKLGGSARGGXXXXXXXXXXRSDNAGRAAEFAGQAIELDATCAKAWFWRGKAKMDAGDLEGSSTDLKEAAKLAPGD--KPVRLALKSLRIKQKEVEAARRSLWGGVFKGGAAKTPAPGQRQVEEAAARARGEGLQDPGRGGGGDRRGGTGGDRLLYASIAVGLVAFAVAGFTAAKY 271
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: D8LGG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG3_ECTSI) HSP 1 Score: 167 bits (422), Expect = 9.940e-49 Identity = 85/102 (83.33%), Postives = 93/102 (91.18%), Query Frame = 3
Query: 45 MTDALPEPAQEGTEDDLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGG 350
M DA+ + + TEDDLLTKEKSYLFEER+ETA RLRQLGNERFKRG MEDAAEAYERAL+HVDFDELQINFDF+D+HRE+LTAAKLPVLLNLCQCLAK GG
Sbjct: 1 MADAVSQVVEGETEDDLLTKEKSYLFEERLETAGRLRQLGNERFKRGCMEDAAEAYERALHHVDFDELQINFDFSDKHRESLTAAKLPVLLNLCQCLAKLGG 102
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: D8LGG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG2_ECTSI) HSP 1 Score: 159 bits (401), Expect = 1.200e-45 Identity = 90/123 (73.17%), Postives = 100/123 (81.30%), Query Frame = 3
Query: 453 MDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGGMFKGGGGSTPVPGKRQLEEAAARARGEGLVDPGRGGGDDDKLK-GGDWWLYVSIAVGVGAFAVAGFAAAKF 818
MDAGDL+GS+TDLQEAAKLAP D KP+R ALKSLRIKQKE +AARR LWGG+FK G T PG+RQ+EEAAARARGE L DPGRGGG D + GGD LY SIAVG+ AFAVAGFAAAK+
Sbjct: 1 MDAGDLEGSSTDLQEAAKLAPGD--KPVRLALKSLRIKQKEVEAARRSLWGGVFKRGAAKTTAPGRRQVEEAAARARGERLQDPGRGGGGDRRGGVGGDRLLYASIAVGLVAFAVAGFAAAKY 121
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A8K1C237_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C237_PYTOL) HSP 1 Score: 117 bits (294), Expect = 6.250e-28 Identity = 75/172 (43.60%), Postives = 102/172 (59.30%), Query Frame = 3
Query: 93 LLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGG 608
LL E+S +FE R+E A R G+ +FK ++E A E YERALYHVDFDE +F+F D+HR + +LPV LNL C G +N + E+A +A+ +D AKA + GKA + GDLDG+ T L++AA+ P D K IR AL L K E +A ++ WGG
Sbjct: 45 LLRDERSCIFETRVERAALCRDRGSAQFKLKNVEKAVEWYERALYHVDFDEGTWHFEFMDQHRAAVNEVRLPVHLNLAMCYL---GDAHQNLEKVIEHANEALVIDPENAKALYRGGKAHLLTGDLDGARTKLKKAAQKQPND--KNIREALHLLAEKTAEHRAKEKQTWGG 211
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A024U9S3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9S3_9STRA) HSP 1 Score: 114 bits (284), Expect = 8.910e-27 Identity = 71/177 (40.11%), Postives = 105/177 (59.32%), Query Frame = 3
Query: 81 TEDDLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQC-LAKSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGG 608
T+++L+TKE+S++FE R+E A + ++LG E K A + YERALYHVDFDE F+ D HR+ + +LPV LNL C LA G + EY A+++D KA + +G+A ++ DLD +A L++AA L P D+A IR A + + + + AKA R+ WGG
Sbjct: 7 TQEELMTKERSFIFETRVEDAKQCKELGAEAHKANERNRAIQFYERALYHVDFDEATWAFELLDNHRDVVNDVRLPVYLNLAACHLALDNGDMK----KVLEYCELALQIDKDNVKALYRKGQAYLNTNDLDAAAVVLKKAASLNPTDKA--IRQAWTTCKERLEVAKAEDRKRWGG 177
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A329T1Z3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1Z3_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.010e-25 Identity = 77/195 (39.49%), Postives = 105/195 (53.85%), Query Frame = 3
Query: 51 DALPEPAQEGTEDD----LLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLA-----KSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGG 608
DA P PA + D L+ E+S +FE RIE AD RQ G+ +FK G +++A Y+RALYHVDFDE +F+F ++R + +LPV LNL C K G E + E A A+ +D KA + G+A + GDLDG+ L +AAK P D+ IR AL +L+ K E K + WGG
Sbjct: 16 DATPAPATDVDMDKETKMLMHDERSCIFETRIERADLCRQRGSAQFKTGDIDEAVTWYQRALYHVDFDEGTWHFEFTPKNRSDVNVVRLPVYLNLAACYLVQGAPKDGENDEELLTKVIENANLALAIDPENDKALYRAGRALLLTGDLDGAKEKLTKAAKYHPSDR--NIRDALSTLKEKLNEHKKVEKERWGG 208
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: K3WBH9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBH9_GLOUD) HSP 1 Score: 108 bits (271), Expect = 1.100e-24 Identity = 71/175 (40.57%), Postives = 98/175 (56.00%), Query Frame = 3
Query: 93 LLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGGMFK 617
LL +E+S++FE R+E A R G+ FK+ ++ A E YERALYHVDFDE +F+F D+HR + +LPV LNL C + + + E A A+E+D KA + GKA + DLD + L AAK P D K IR AL L++K E K ++ WGG+ K
Sbjct: 33 LLHEERSFIFETRVENAASCRDRGSAEFKQKNIAKAVEWYERALYHVDFDEGTWHFEFLDKHRNAVNEVRLPVYLNLAACYLNK---HNVDFAKVIENADLALEIDPQNTKALYRGGKAHLLLDDLDKAKKKLTLAAKNQPSD--KNIREALTLLKVKIAEQKQKEKQTWGGLLK 202
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A485LNU0_9STRA (Aste57867_23136 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNU0_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.210e-24 Identity = 66/174 (37.93%), Postives = 102/174 (58.62%), Query Frame = 3
Query: 87 DDLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGG 608
++L+TKE+S +FE R+E A + ++LG + K A + YERALYHVDFDE F+F D+HR+ + +LPV LNL C G + + EY A+ +D KA + +G+A +++ + D +AT L++AA L+P D+A IR A + + K AK ++ WGG
Sbjct: 8 EELMTKERSCIFETRVEDAKQCKELGADAHKASERNRALQFYERALYHVDFDEGTWAFEFLDQHRDAVNQVRLPVYLNLAACHLALEDGEMQ---KVHEYCDLALAIDKDNVKALYRKGQAYLNSNNPDAAATVLKKAAALSPNDKA--IRQAWATCKEKLAVAKVEEKKRWGG 176
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A1V9Z0S9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z0S9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.650e-23 Identity = 70/173 (40.46%), Postives = 101/173 (58.38%), Query Frame = 3
Query: 90 DLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGG 608
D+LTKE+S +FE R+E A + ++LG E K A E Y+RALYHV+FDE +F+ D+HR+ + A +LPV LNL C +NA + EY A++LD+ KA + +G A + DLD ++ L+EA +L P D+A IR A+ L+ K AK + WGG
Sbjct: 7 DVLTKERSCVFEGRVEDALQCKKLGAEAQKSREFVKAVEYYDRALYHVEFDEGTWSFELMDKHRDAVNAVRLPVYLNLAACYLDES--LMDNA-KVHEYCELALDLDTENVKALYRKGIAYLRQNDLDSASFVLREAVQLQPHDKA--IRVAIAELKQKLSVAKKVDKEKWGG 174
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Match: A0A6G0X1Z2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1Z2_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.980e-23 Identity = 65/177 (36.72%), Postives = 98/177 (55.37%), Query Frame = 3
Query: 78 GTEDDLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEDAAEAYERALYHVDFDELQINFDFNDEHRETLTAAKLPVLLNLCQCLAKSGGGRSENAGRAAEYAGQAIELDSTCAKAYFWRGKARMDAGDLDGSATDLQEAAKLAPEDQAKPIRFALKSLRIKQKEAKAARRRLWGG 608
E+++LTKE+SY+FE R+E A R ++LG K A + YERALYHVDFDE F+ D+HR+ + +LPV LNL G + + E A+++D KA + +G+A +++ D DG++ L+ AA L P D+A IR A + + AK ++ WGG
Sbjct: 6 NVEEEVLTKERSYVFETRVEDAQRCKELGAAAHKANERNGAVQCYERALYHVDFDEGTWAFELLDQHRDAVNEVRLPVYLNLAAIYLADDNGDMQ---KVHENCDLALKIDKDNVKALYRKGQAYLNSNDPDGASIVLKNAAALNPNDKA--IRQAWAKCKELLQVAKELEKKRWGG 177 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1206.1 >prot_C-linearis_contig11.1206.1 ID=prot_C-linearis_contig11.1206.1|Name=mRNA_C-linearis_contig11.1206.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=267bp MTDALPEPAQEGTEDDLLTKEKSYLFEERIETADRLRQLGNERFKRGHMEback to top mRNA from alignment at C-linearis_contig11:983873..986709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1206.1 ID=mRNA_C-linearis_contig11.1206.1|Name=mRNA_C-linearis_contig11.1206.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2837bp|location=Sequence derived from alignment at C-linearis_contig11:983873..986709- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:983873..986709- >mRNA_C-linearis_contig11.1206.1 ID=mRNA_C-linearis_contig11.1206.1|Name=mRNA_C-linearis_contig11.1206.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at C-linearis_contig11:983873..986709- (Chordaria linearis ClinC8C monoicous)back to top |