mRNA_C-linearis_contig11.1204.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: D8LGG1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG1_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 1.200e-168 Identity = 243/360 (67.50%), Postives = 284/360 (78.89%), Query Frame = 1
Query: 19 ADVGRWRKIVELGSGRTGSVALCIEP---ESPRDEKTCGERRHGVLHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLE--TKGRES--LGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHS-----RNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRDAEEVMSHDWFEPVDWARTAKMDTDPPEFRKDLGELEYLEEGAASKG-AAVDVDPDGLFAGF 1059
AD+G WRKIVELGSGRTGSVALCIEP +P +E+ CGE +H V AVKRV RQC N GA R+VLQEKKALQ L G GIV+LR TSKDDE+LYFVLEPLLGGPLHRHIRAG GHL+VP++ FY++++TS IAHMH++GFVHRD+KASNIV ++GHVK+VDLGCSKQLE T G + +GA GG + +K++TYCGTPHSMAPEMVSREGHG A DWWALG+L+HEM+ GEPPFGY GGD+L QRI GLP S R D DEP+ LPIVR+LL ++PQQRLG RDA+EVMSH WF VDW RT K+DT+PP FRKDLGELE+L+ A G +A DVDPDGLFAGF
Sbjct: 7 ADIGSWRKIVELGSGRTGSVALCIEPILSSAPNEERRCGEHQHHVFQAVKRVRRQCVKNNGAIRQVLQEKKALQDLRGHQGIVDLRYTSKDDEHLYFVLEPLLGGPLHRHIRAGPRGHLEVPAAIFYASEITSAIAHMHSHGFVHRDLKASNIVFSASGHVKIVDLGCSKQLERQTGGCKDGDVGATGGFSFQKTYTYCGTPHSMAPEMVSREGHGMAADWWALGILVHEMVNGEPPFGY-GGDDLTQRITAGLPRDTSPESGEREDKDYRNVDEPKVLPIVRRLLDTDPQQRLGFSRDAQEVMSHAWFAGVDWERTTKLDTEPPAFRKDLGELEHLD--AEHTGISATDVDPDGLFAGF 363
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A835YNF8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF8_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.260e-77 Identity = 154/356 (43.26%), Postives = 196/356 (55.06%), Query Frame = 1
Query: 22 DVGRWRKIVELGSGRTGSVALCIEPESPRDEKTCGERRHGVLHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYE-GGDELLQRIVVGL-----PGLHSRNDGVAAGSDEPRSLPIVRQL----LCSEPQQRLGSLRDAEEVMSHDWFEPVDWARTAKMDTDPPEFRKDLGELEYLEEGAASKGAAVDVDPDGLFAGF 1059
D +++IV LG GR G+V LC + S G LHAVK V R +A A RV++EK+ L ALSG GI LR T +D L FVLEP LGGPLH+HIRA +GHL + +S FY A++ S +A +HA G VHRD+KASN+VL + GH+K+VDLGC++++ L + TYCGT H MAPEMV+R GH VDWWALG+L+ EML G+PPF Y G DE I + + +R +A+ E + P V L L EP +RLG A EV SH FE DW +PP F K LGELE G + + FAGF
Sbjct: 35 DTSTFQQIVPLGRGRHGAVYLCRDTSS------------GQLHAVKSVPRSVIRDADAAARVMREKEMLGALSGSPGIATLRGTWRDPFCLTFVLEPALGGPLHKHIRAARDGHLSLVTSLFYMAELVSAVADVHAAGVVHRDLKASNVVLDARGHIKVVDLGCARRIPCSASGDL----------ARTYCGTLHCMAPEMVARRGHSCCVDWWALGILLVEMLAGQPPFPYGIGEDEQDDAIRTSIRDATCDSVTARLSHIASACAEWPTFPAVHNLIGGLLQPEPLERLGH-GGAREVQSHACFEGWDWDAVRSHGLEPPAFCKALGELEAA--GVVAGDMDITDADQQAFAGF 365
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A6H5KAT4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.580e-53 Identity = 90/146 (61.64%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 421 MHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETK----GRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLP-----GLHSRNDGVAAGSDEPRSLPIVR 831
MH+ GFVHRD+KASNIV ++GHVK+VDLGCSKQL+ + + A GG + +K++TYCGTPHSMAPEMVSREGHG AVDWWALG+L+HEM+ GEPPFGY GGD+L +RI GLP G R D DEP+ LPIVR
Sbjct: 1 MHSQGFVHRDLKASNIVFSASGHVKIVDLGCSKQLKRQTGVCNDGDVAATGGFSFQKTYTYCGTPHSMAPEMVSREGHGMAVDWWALGILVHEMVNGEPPFGY-GGDDLTKRITAGLPREKPLGPGEREDEDNRNVDEPKVLPIVR 145
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A7S1U157_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U157_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.930e-48 Identity = 95/242 (39.26%), Postives = 131/242 (54.13%), Query Frame = 1
Query: 25 VGRWRKIVELGSGRTGSVALCIEPESPRDEKTCGERRHGVLHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRA-----------GSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGY 717
V R ++ LG GR G V LC +PE G L A K R+ + RV++E+ ++ L V L T+KDD LYF++E LGGPLHRH+RA GS + Y+A++ +G+ H H VHRD+KASN+++ + GH+KL D G ++ L+ +++ TYCGTPH+MAPEM R GHGF VDWWA GVL++E+ G PPFGY
Sbjct: 4 VRRLEDVLVLGHGRMGPVTLCRDPE-------------GGLVARKTFKRKAIMHPA---RVMRERDVMRTLGDCPYTVNLIGTAKDDGFLYFLMEACLGGPLHRHLRAEMARPRLGADPGSKAGFPWDRLRVYAAEIAAGLKHCHDAAVVHRDLKASNVLISADGHLKLADFGFARTLDPG-------------ERAETYCGTPHAMAPEMWRRSGHGFGVDWWAFGVLVYELGVGAPPFGY 216
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A109FCS3_9BASI (Camp-dependent protein kinase catalytic subunit n=1 Tax=Rhodotorula sp. JG-1b TaxID=1305733 RepID=A0A109FCS3_9BASI) HSP 1 Score: 173 bits (438), Expect = 1.040e-46 Identity = 106/331 (32.02%), Postives = 165/331 (49.85%), Query Frame = 1
Query: 10 SQPADV-----------GRWRKIVELGSGRTGSVALC---IEPESPRDEKTCGERRHGVLHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHSRNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRD-AEEVMSHDWFEPVDWARTAKMDTDPP 957
S PADV G + + LG+G G V L + P P + + A+K + + V E+ L + +V L CT +D+ NLY +LE + GG L H+R DV ++FY A + + H+H ++RD+K N+++G+ GH+K+ D G +K ++ + +FT CGTP +APE+++ GHG A DWWALGVL+ E+L G PPF + E+ ++I LH + G +P + ++R+ L ++ QRLG+LR+ A +VMSH WFE VDWA + + P
Sbjct: 59 SPPADVLRRGEDLGLSLGDFDMLDTLGTGTFGRVILVRLRVSPSRPHQTQP-------LYFALKVLEKSTVVRLRQVEHVNSERSTLTHVQ-HPFVVNLFCTFQDEANLYMLLEFVQGGELFSHLRRAGRFSADV--ARFYVANLVLVLDHLHQQDIIYRDLKPENLLIGADGHIKVTDFGFAKYVQDR---------------TFTLCGTPEYLAPEIITATGHGAAADWWALGVLLFELLAGYPPFFADNPLEIYEKI------LHGKF--AVPGHIDPVAKDLIRRFLTADLTQRLGNLRNGARDVMSHPWFEGVDWAAVERKEIQAP 356
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A4V1J5B9_9FUNG (Putative camp-dependent protein kinase catalytic subunit n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J5B9_9FUNG) HSP 1 Score: 171 bits (433), Expect = 1.350e-46 Identity = 98/308 (31.82%), Postives = 161/308 (52.27%), Query Frame = 1
Query: 43 IVELGSGRTGSVALCIEPESPRDEKTCGERRHGV--LHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHSRNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRD-AEEVMSHDWFEPVDWARTAKMDTDPP 957
++ LG+G G V LC RRHG +A+K + + + E++ L ++ IV L CT +D +LY + E ++GG L H+R DV ++FY+A++ I ++H++ F++RD+K N++L GH+K+ D G +K++E + ++T CGTP +APE++ +GHG AVDWWALG+LI+EML G PPF + + ++I+ G D P + ++RQLL ++ +RLG+L++ A ++ H WF V+W TD P
Sbjct: 50 LITLGTGTFGRVYLC--------------RRHGSNEYYAMKVLRKADVVKLKQVEHINSERQILSQVNFPF-IVNLHCTFQDQVSLYMLQEYVMGGELFTHLRKAGRFPNDV--TRFYAAEIILAIEYLHSHNFIYRDLKPENLLLDLRGHIKITDFGFAKKVEDR---------------TWTLCGTPEYLAPEIIQSKGHGKAVDWWALGILIYEMLAGYPPFFDDNPFGIYEKILAGRISFPPHFD--------PAAKDLIRQLLTADRTKRLGNLKNGALDIKQHKWFHSVNWEALMARTTDAP 317
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A158R5L2_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A158R5L2_9BILA) HSP 1 Score: 170 bits (431), Expect = 1.580e-46 Identity = 105/342 (30.70%), Postives = 175/342 (51.17%), Query Frame = 1
Query: 40 KIVELGSGRTGSVALCIEPESPRDEKTCGERRHGVLHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHSRNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRD-AEEVMSHDWFEPVDWARTAKMDTDPPEFRK-----DLGELEYLEEGAASKGAAVDVDPDGL 1047
+I +G G G V L S + A+K+++ + V EK+ L LS IV++ CT+ D +LY + E L GG L ++RA ++ S+FY+A++ S + ++H+ V+RD+K N++L GHVK+ D G +K++ +++T CGTP +APE+V+ EGH AVDWW+LG+LI+EM+ G PPF +++ ++I+ G D A +V++LL S+P +RLG+L++ A +VM+H+WF +DW A+M PP D G + +E + ++ + P+ L
Sbjct: 27 EICTIGKGSFGRVHLVRHNASEQ------------YFALKKLSISKIISTRQVEHVHSEKRILSLLS-HPFIVKMYCTASDRCSLYMLFEYLSGGELFSYLRASKTFSTNM--SRFYAAEIVSALHYLHSKNIVYRDLKLENLMLDKDGHVKITDFGFAKEV---------------VNRTWTMCGTPEYLAPEIVTHEGHDKAVDWWSLGILIYEMIVGVPPFQGRALNDVFEKILEGKLKFPRHFDCNAKD--------LVKKLLQSDPSKRLGNLKNGAVDVMNHEWFAEIDWDEVAEMKLTPPVIPTVYSSGDTGNFDSYDEESDTEVVSEPASPEQL 330
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A1Y2GUS8_9FUNG (Serine/threonine-protein kinase PRKX-like protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A1Y2GUS8_9FUNG) HSP 1 Score: 170 bits (430), Expect = 2.390e-46 Identity = 112/354 (31.64%), Postives = 175/354 (49.44%), Query Frame = 1
Query: 37 RKIVELGSGRTGSVALCIEPESPRDEKTCGE------RRHGVLHAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHSRNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRD-AEEVMSHDWFEPVDWA----RTAKMDTDPPEFRK-DLGELEYLEEGAASKGAAVDVDP-DGLFAGF 1059
R+IV L SGR+ + T G RR +A+K + + + EK+ L + IV L T +DD NLY +LE ++GG L H+R G ++FY+A++ I ++H+ ++RD+K N++L S GH+K+ D G +K++E + ++T CGTP +APE++ +GHG VDWWALG+LI EML G PPF + + ++I+ G S D P++ ++++LL ++ +RLG+L+D + ++ +H WF VDW RT K +PP D G E E + D DP LFA F
Sbjct: 16 RRIVSLFSGRSSCFLFLFSNDLGTG--TFGRVYLTKFRREPSYYAMKVLKKTEVVRLKQVEHINSEKQILSQVDFPF-IVNLFTTFQDDRNLYMLLEYVIGGELFSHLRKA--GRFTNDMTRFYAAEIVLAIEYLHSRDIIYRDLKPENLLLDSKGHIKITDFGFAKRVEDR---------------TWTLCGTPEYLAPEIIQSKGHGKPVDWWALGILIFEMLAGYPPFFDDNPFGIYEKILAGRIYFPSHID--------PQAKDLIKRLLTADRTRRLGNLKDGSNDIRNHKWFRGVDWQGLLNRTVKAPIEPPFVHPGDTGNFEKYPE--VTDEDTADGDPYRSLFANF 339
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: A0A4U0VLV0_9BASI (Uncharacterized protein n=1 Tax=Rhodotorula sp. CCFEE 5036 TaxID=1965284 RepID=A0A4U0VLV0_9BASI) HSP 1 Score: 174 bits (440), Expect = 8.290e-46 Identity = 110/331 (33.23%), Postives = 165/331 (49.85%), Query Frame = 1
Query: 10 SQPADV-----------GRWRKIVELGSGRTGSVALCIEPESPRDEKTCGERRHGVL---HAVKRVNRQCATNAGAFRRVLQEKKALQALSGQNGIVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHSRNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRD-AEEVMSHDWFEPVDWARTAKMDTDPP 957
S PADV G + + LG+G G V L SP R H L A+K + + V E+ L A +V L CT +D+ NLY +LE + GG L H+R DV ++FY A + + H+H ++RD+K N+++G+ GH+K+ D G +K ++ + +FT CGTP +APE+++ GHG A DWWALGVL+ E+L G PPF + E+ ++I+ R G +P + ++R+LL ++ QRLG+LR+ A +VMSH WFE VDWA + + P
Sbjct: 217 SPPADVLRRGEDLGLSLGDFDMLDTLGTGTFGRVILVRLRVSP-------SRPHQPLPLYFALKVLEKSTVVRLRQVEHVNSERSTL-AHVHHPFVVNLFCTFQDEANLYMLLEFVQGGELFSHLRRAGRFSADV--ARFYVANLVLVLDHLHQQDIIYRDLKPENLLIGADGHIKVTDFGFAKYVQNR---------------TFTLCGTPEYLAPEIITATGHGAAADWWALGVLLFELLAGYPPFFADNPLEIYEKIL--------RGKFAVPGHIDPVAKDLIRRLLTADLTQRLGNLRNGARDVMSHPWFEGVDWAAVERKEIRAP 514
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Match: U9TCK6_RHIID (Kinase-like domain-containing protein n=6 Tax=Glomeraceae TaxID=36751 RepID=U9TCK6_RHIID) HSP 1 Score: 168 bits (426), Expect = 4.340e-45 Identity = 86/225 (38.22%), Postives = 131/225 (58.22%), Query Frame = 1
Query: 253 IVELRCTSKDDENLYFVLEPLLGGPLHRHIRAGSNGHLDVPSSKFYSAQVTSGIAHMHANGFVHRDIKASNIVLGSTGHVKLVDLGCSKQLETKGRESLGAAGGAACKKSFTYCGTPHSMAPEMVSREGHGFAVDWWALGVLIHEMLTGEPPFGYEGGDELLQRIVVGLPGLHSRNDGVAAGSDEPRSLPIVRQLLCSEPQQRLGSLRD-AEEVMSHDWFEPVDW 924
IV L CT +DD NLY +LE ++GG L H+R G ++FY+A++ I ++H+N ++RD+K N++L S GHVK+ D G +K++E + ++T CGTP +APE++ +GHG VDWWALG+LI EML G PPF + + ++I+ G S D P + ++++LL S+ +RLG+LR +E+V H WF VDW
Sbjct: 151 IVNLFCTFQDDRNLYMLLEYVIGGELFSHLRKA--GRFTNDMTRFYAAEIVLAIEYLHSNDIIYRDLKPENLLLDSRGHVKITDFGFAKRVEDR---------------TWTLCGTPEYLAPEIIQSKGHGKPVDWWALGILIFEMLAGYPPFFDDNPFGIYEKILAGKIQFPSHFD--------PNAKDLIKRLLTSDRTKRLGNLRGGSEDVKKHKWFRGVDW 350 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1204.1 >prot_C-linearis_contig11.1204.1 ID=prot_C-linearis_contig11.1204.1|Name=mRNA_C-linearis_contig11.1204.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=354bp MEASQPADVGRWRKIVELGSGRTGSVALCIEPESPRDEKTCGERRHGVLHback to top mRNA from alignment at C-linearis_contig11:972587..975627+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1204.1 ID=mRNA_C-linearis_contig11.1204.1|Name=mRNA_C-linearis_contig11.1204.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3041bp|location=Sequence derived from alignment at C-linearis_contig11:972587..975627+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:972587..975627+ >mRNA_C-linearis_contig11.1204.1 ID=mRNA_C-linearis_contig11.1204.1|Name=mRNA_C-linearis_contig11.1204.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at C-linearis_contig11:972587..975627+ (Chordaria linearis ClinC8C monoicous)back to top |