mRNA_C-linearis_contig11.1196.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1196.1
Unique NamemRNA_C-linearis_contig11.1196.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: A0A6H5JXZ4_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ4_9PHAE)

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 497/718 (69.22%), Postives = 567/718 (78.97%), Query Frame = 1 
Query:  301 MGTTVKLGVLGTLALAT-SAFAGCPYLSGQKDQQSLDNNIGGERLLRAAGNKFGEMSEEMPEGSSYGEPDFSRETYDAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDP--DVPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYT-EDNGVVSNLYYNLLLTETWEEVPGSNGEEYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVLMNADRFDGPTGNVC 2442
            M  T KLGVL  LALAT  A A CP+L GQK  Q  D  +G +R L       G   +    GS     DFSRETY+A++ADI A  TDSQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  WADNTNLDKAL +L PIKLKYGDA+SW DLITLTG+ +I SMGGP +GFCAGR DD SGFDSLELGP+PEQ EA APCA NGTCE PLG STVGLIYVNPEGP GVPDP  SA +IR+VF RMGMND+ETVALIGGGHAFGK HGAC TGPG DP DAPEAPWPGTCGDPDSPTFGRAENTFTSGFEG WTVEP VWDN+YF+DLLEYDW+  ESP   +QW PV K+GAT+   ++PDIIMLT+D+ALL+D+ YL +VE FA+D   LD AFAAAWYKL +RDMG + RC GTDV PPQDFQLPLP+AP DLP  +  KS I  +L +D SYP+LF TLA++CA+T+RSTD +GGCNGARIRF P+ +W  N  LDQV+ LL  V+D++P++SYADLIVLAGN+AL     L  L +C GRVDA E D    L+SILEP REY+ VI+GVRDRMKI GL+V QMVALAGRPRS ++M  LGFSGSYT E+N  +SN +Y  LLTETWEEVPGSNG+E+Q+V   G+YVLATDLALVWDPEFKAQ V YA+DN+ FL +F  AWT +MNADRFDGPTGNVC
Sbjct:    1 MSRTCKLGVLAALALATVPASASCPFLGGQKGSQP-DLGVGVDRAL-------GSYDDSYYSGSG---ADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQ-EAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFRRMGMNDSETVALIGGGHAFGKFHGACATGPGADPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETKDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPTDLPDTEGAKSAIMSILSSDPSYPALFVTLAWQCASTYRSTDYLGGCNGARIRFSPERDWAGNQSLDQVLSLLSLVQDEYPDVSYADLIVLAGNLALD----LDDLPFCAGRVDAAEGDE---LISILEP-REYDDVIVGVRDRMKIRGLSVAQMVALAGRPRSASHMVALGFSGSYTDEENPALSNAFYVTLLTETWEEVPGSNGQEFQAVGRSGIYVLATDLALVWDPEFKAQTVMYAEDNEQFLKDFASAWTAVMNADRFDGPTGNVC 698
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: D8LN39_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN39_ECTSI)

HSP 1 Score: 792 bits (2045), Expect = 5.220e-273
Identity = 413/628 (65.76%), Postives = 454/628 (72.29%), Query Frame = 1 
Query:  295 TKMGTTVKLGVLGTLAL-ATSAFAGCPYLSGQKDQQSLDNNIGGERLLRAAGNKFGEMSEEMPEGSSYGEPDFSRETYDAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPDVPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYTEDN 2175
            T MG T  L  L   AL A +A  GCP+LSGQKD   L + IGGERLL          S +  +G   G  D+SRETY+AI+ADI +   DS+DFWPADFGNYGPL IRLAWHCAGSYR+SDGRGGCDGGRIRFFPEHGWADNTNLDKAL +L PIKLKYGDAISWADLITLTGD++I SMGGP +GFCAGRQDD+SG+DSLELGPTPEQ EATAPCA NGTCE+PLG STVGLIYVNP GP GVPDP  SAP+IREVF RMGMNDTETVALIGGGHAFGKVHGACP+GPGPDPFDAPEAPWPGTCGDPDS TFGRAENTFTSGFEGAWT EPTVWDNSYF DLLEYDWIQ ESP G IQWIPV K+ AT+ DVPDIIMLT+DVALL D  YL IVE FAADQ ALD+AF+ AWYKLVTRDMGP+ RC GTDVPPPQ+FQLPL D P+DLPS+   K  I  +L  +++Y  LF TLAY+CA+TFRSTD +GGCNGARIRFPPQSEW  N GL                                                                                    TV QMVALAGRPRS+++MTGLG+SGSYTED+
Sbjct:   61 TNMGRTCNLVWLAGFALVARTASGGCPFLSGQKD---LGSRIGGERLL----------SGDHDDGHEGG-ADYSRETYEAIQADIVSMFVDSKDFWPADFGNYGPLFIRLAWHCAGSYRASDGRGGCDGGRIRFFPEHGWADNTNLDKALTLLQPIKLKYGDAISWADLITLTGDMAISSMGGPILGFCAGRQDDDSGYDSLELGPTPEQ-EATAPCAVNGTCELPLGTSTVGLIYVNPGGPMGVPDPEASAPQIREVFSRMGMNDTETVALIGGGHAFGKVHGACPSGPGPDPFDAPEAPWPGTCGDPDSATFGRAENTFTSGFEGAWTEEPTVWDNSYFVDLLEYDWIQAESPAGNIQWIPVLKEDATETDVPDIIMLTSDVALLMDPEYLAIVEEFAADQYALDIAFSNAWYKLVTRDMGPHSRCVGTDVPPPQEFQLPLADTPKDLPSYSGAKEAIGRILSEESTYAPLFVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGLS-----------------------------------------------------------------------------------TVAQMVALAGRPRSSSFMTGLGYSGSYTEDD 590
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: D7G7J0_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J0_ECTSI)

HSP 1 Score: 779 bits (2012), Expect = 6.990e-270
Identity = 386/512 (75.39%), Postives = 421/512 (82.23%), Query Frame = 1 
Query:  301 MGTTVKLGVLGTLALATS-AFAGCPYLSGQKDQQSLDNNIGGERLLRAAGNKFGEMSEEMPEGSSYGE-PDFSRETYDAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPDVPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGL 1830
            MG T  L  L   AL T  A  GCP+LSGQ+DQQ L N+IGGERLL                 S Y E  D+SRETY+AI+ADI A   DS+DFWPADFGNY PLMIRLAWHCAGSYR+SDGRGGCDGGRIRFFPEHGWADNTNLDKAL +LTPIKLK+GDAISW DLITLTGD++I SMGGP +GFCAGRQDD SG+DSLELGPT E+QEATAPCA NGTCEVPLG STVGLIYVNP GP GVP+PT SAP+IREVF RMGMNDTETVALIGGGHAFGKVHGACPTGPG DP DAPE PWPGTCGDPDS TFG+ +NTFTSGFEGAWT EPTVWDN YF DLLEYDWIQ+ESP G IQWIPV K+ AT+ DVPDIIMLT+DVALL D  YL IVE FA++Q+ALDVAF+ AWYKLVTRDMGPY RC GTDVPPPQDFQLPLPD P DLPS  + K  I  +L+ D++Y SL  TLAY+CA+TFRSTD +GGCNGARIRFPPQSEW  N GL
Sbjct:    1 MGRTCNLVRLAGFALVTGIASGGCPFLSGQEDQQQLGNHIGGERLLST--------------DSGYEEGADYSRETYEAIKADILAVFVDSKDFWPADFGNYAPLMIRLAWHCAGSYRNSDGRGGCDGGRIRFFPEHGWADNTNLDKALTLLTPIKLKHGDAISWGDLITLTGDMAISSMGGPILGFCAGRQDDSSGYDSLELGPT-EEQEATAPCAVNGTCEVPLGTSTVGLIYVNPGGPMGVPEPTESAPQIREVFARMGMNDTETVALIGGGHAFGKVHGACPTGPGADPIDAPEDPWPGTCGDPDSDTFGKGDNTFTSGFEGAWTEEPTVWDNHYFIDLLEYDWIQDESPAGNIQWIPVLKEDATETDVPDIIMLTSDVALLMDTEYLAIVEEFASNQEALDVAFSNAWYKLVTRDMGPYTRCVGTDVPPPQDFQLPLPDKPTDLPSSTEAKRAIGRILEADSTYASLLVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGL 497
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: D7G6M6_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M6_ECTSI)

HSP 1 Score: 724 bits (1869), Expect = 1.630e-248
Identity = 360/516 (69.77%), Postives = 406/516 (78.68%), Query Frame = 1 
Query:  301 MGTTVKLGVLGTLALAT-SAFAGCPYLSGQKDQQSLDNNIGGERLLRAAGNKFGEMSEEMPEGSSYGEPDFSRETYDAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPD--VPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQV 1839
            M  T KLGVL  LALA   A A CP+L GQK  Q  D   G +R LR+  + +           S    DFSRETY+A++ADI A  TDSQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  WADNTNLDKAL +L PIKLKYGDA+SW DLITLTG+ +I SMGGP +GFCAGR DD SGFDSLELGP+PEQ EA APCA NGTCE PLG STVGLIYVNPEGP GVPDP  SA +IR+VF RMGMND+ETVALIGGGHAFGK HGAC TGPGPDP DAPEAPWPGTCGDPDSPTFGRAENTFTSGFEG WTVEP VWDN+YF+DLLEYDW+  ESP   +QW PV K+GAT+ +  +PDIIMLT+D+ALL+D+ YL +VE FA+D   LD AFAAAWYKL +RDMG + RC GTDV PPQDFQLPLP+AP DLP     KS I  +L +D SYP+LF TLA++CA+T+RSTD +GGCNGARIRF P+ +W  N GLDQ+
Sbjct:    1 MSRTCKLGVLAALALAAVPASASCPFLGGQKGSQP-DLGTGVDRALRSYDDSY----------YSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQ-EAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFGRMGMNDSETVALIGGGHAFGKFHGACATGPGPDPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPADLPDTDGAKSAIMSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPERDWAGNQGLDQL 504
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: A0A8J4F3U4_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F3U4_9CHLO)

HSP 1 Score: 731 bits (1888), Expect = 3.380e-248
Identity = 372/653 (56.97%), Postives = 447/653 (68.45%), Query Frame = 1 
Query:  526 DAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPD-VPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTS------------YPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYTEDNGVVSNLYYNLLLTETWEEVPGSNGE-EYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVLMNADRFDGPTGNVC 2442
            DA++AD++A   DS+D WPADFGNYGPLMIR+AWHCAG+YR SDGRGGCDGGR RF PE  WADN NLDKA  +L PIK KYG+A++W DLI L GD +I SMGGP +GFCAGR DD  G  SL LGP+ +Q E  APC+ NG CE PLGAST+ LIYVNPEGP  VPDP LSAP+IREVF RM MND+ETVALIGGGHAFGKVHGACPTGPGP P   P  PWPGTCG+   P  G+  NTFTSGFEG WT  P  WDN YFQ+LL+YDW     PGG  QW PV  K A+DPD V +I+MLT DVALL D IYL +V+ FAA+Q ALD+AF+ AWYKLVTRDMGPY RC G  VPPPQ FQ PLP  P   P FK V+  I   L   +S            Y +LF TLA++CA+ FR TD  GGCNGARIRF PQ +W  N  +D V+ +LEP+K  FP ++YADLIV AG+ AL   A    L +C GR DA  D+         +P R +   ++ ++D  ++ GLT R+MVAL  R RS +    LG+SGS+T++  +++N Y+ +LL   W  V  + G+ E ++V T GVY++ TDLA+ WDP F     E+A D + FL  F   W  LM ADRF GPTGN C
Sbjct:   64 DAVKADLKALFLDSKDSWPADFGNYGPLMIRMAWHCAGTYRQSDGRGGCDGGRQRFDPERSWADNVNLDKARGLLWPIKQKYGNALTWGDLIILAGDAAIESMGGPILGFCAGRVDDADGTASLPLGPSLDQ-EMVAPCSVNGECEAPLGASTMSLIYVNPEGPMAVPDPELSAPQIREVFGRMSMNDSETVALIGGGHAFGKVHGACPTGPGPSPAQQPWNPWPGTCGE--GPMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVHVGPGGHHQWRPV-NKDASDPDPVANIMMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGDQVPPPQPFQAPLPPPPATKPDFKAVEKAITKALRTASSALPADMVGGKPYYGALFATLAWQCASNFRQTDYTGGCNGARIRFSPQKDWPQNVAMDSVLAVLEPIKASFPGLTYADLIVQAGSTALT-NAKARKLKFCSGRSDASPDETPFPF----QPPRVFSNKLVQLKDNAQVMGLTSREMVALQARLRSPSQQRRLGYSGSWTDNPSLLTNEYFKVLLNNDWVNVTSAAGQLEMKAVGTEGVYMMPTDLAVKWDPVFATIAQEFATDANAFLEAFAAGWNKLMIADRFKGPTGNEC 707
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: A0A8J4G544_9CHLO (PEROXIDASE_4 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G544_9CHLO)

HSP 1 Score: 719 bits (1856), Expect = 2.140e-243
Identity = 364/652 (55.83%), Postives = 443/652 (67.94%), Query Frame = 1 
Query:  529 AIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPD-VPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVL------------DNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYTEDNGVVSNLYYNLLLTETWEEVPGSNGE-EYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVLMNADRFDGPTGNVC 2442
            A++AD++A   DSQ+ WPADFG+YGPLMIR+AWHCAGSYR SDGRGGCDG R RF PE  WADNTNLDKA  +L PIK KYG+A+SW DL+ L GD +I SMGGP +GFCAGR DD  G  SL LGP+ +Q E  APC+ NG CE PLGAST+ LIYVNPEGP  VPDP LSAP+IREVF RM MND+ETVALIGGGHAFGK HGACPTGPGP P + P  PWPGTCG+      G+  NTFTSGFEG WT  P  WDN YFQ+LL+YDW     PGG  QW PV K GA   D +PDIIMLT DVALL D IYL +V+ FAA+Q ALD+AF+ AWYKLVTRDMGPY RC G  VPPPQ FQ PLP  P     +K +   I   L            +    Y +LF TLA++CA++FR TD  GGCNGARIRF PQ +W  N  +D+V+ +L+P+KD FP ++YADLIVLAGN AL   A    + +C GR DA   DP+   +++  P R +   ++ V+D  ++ GLT R+ VAL    RS +    LG+SGS+T D   +SN ++ +LL+  W     + G+ E ++V   G+Y++  DLA+ WDP F A   EYA D+  F   F   W  +MNADRF GP GN+C
Sbjct:   64 AVKADLKALFVDSQESWPADFGHYGPLMIRMAWHCAGSYRLSDGRGGCDGARQRFDPERSWADNTNLDKARGLLWPIKEKYGEALSWGDLMILAGDTAIESMGGPILGFCAGRIDDTDGTASLPLGPSLDQ-EMVAPCSVNGECEAPLGASTMSLIYVNPEGPLAVPDPELSAPQIREVFARMAMNDSETVALIGGGHAFGKTHGACPTGPGPSPAEQPWNPWPGTCGN--GTMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLKYDWEVYIGPGGHHQWEPVRKPGADPEDELPDIIMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGNQVPPPQPFQSPLPPPPSVTLDYKAITKAITKALRTVSPAIVGDQVNGKPYYGALFATLAWQCASSFRQTDYTGGCNGARIRFAPQKDWPQNVAMDKVLEVLQPIKDSFPGLTYADLIVLAGNTALT-DAKAKRMKFCSGRSDA---DPSEPPVTVYPP-RVFNNKLVQVKDNAQVMGLTPREAVALKALIRSPSQQQRLGYSGSWTNDPSRLSNEFFKVLLSNDWVNTTSAAGQLEMKAVGKEGIYMMPCDLAIKWDPVFAAIAQEYASDSYAFYLAFASGWNKMMNADRFKGPAGNMC 707
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: A0A8J4B542_9CHLO (PEROXIDASE_4 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B542_9CHLO)

HSP 1 Score: 717 bits (1850), Expect = 1.890e-242
Identity = 366/653 (56.05%), Postives = 441/653 (67.53%), Query Frame = 1 
Query:  529 AIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDP--DVPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVL------------DNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYTEDNGVVSNLYYNLLLTETWEEVPGSNGE-EYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVLMNADRFDGPTGNVC 2442
            A++AD++A   DSQ+ WPADFG+YGPLMIR+AWHCAGSYR SDGRGGCDG R RF PE  WADN NLDKA  +L PIK KYGDA+SW DLI L GD +I SMGGP +GFCAGR DD  G  SL LGP+ +Q E  APC+ NG CE PLGAST+ LIYVNPEGP  VPDP LSAP+IREVF RM MND+ETVALIGGGHAFGK HGACPTGPGP+P   P  PWPGTCG+   P  G+  NTFTSGFEG WT  P  WDN YF +LL+YDW     PGG  QW PV K+ A DP  D+PDIIMLT DVALL D IYL +V+ FAA+Q ALD+AF+ AWYKLVTRDMGPY RC G  VPPPQ FQ PLP  P  +P +K V   I   L            +    Y +LF TLA++CA++FR TD  GGCNGARIR  PQ +W  N  +D+V+ +LEP+KD FP ++YADLIVLAGN AL   A    + +C GR DA  D+P   +     P R +   ++ ++D   + GLT R+ VAL    RS +    LG+SGS+T++   +SN ++ +LL   W  V  + G+ E ++V   GVY++  DLA+ WDP F A   E+  D+  F   F   W  +MNADRF GP GN C
Sbjct:   66 AVKADLKALFVDSQESWPADFGHYGPLMIRMAWHCAGSYRLSDGRGGCDGARQRFDPERSWADNVNLDKARGLLWPIKQKYGDALSWGDLIILAGDTAIESMGGPILGFCAGRIDDADGAASLPLGPSLDQ-EMVAPCSVNGECEAPLGASTMSLIYVNPEGPLAVPDPELSAPQIREVFSRMAMNDSETVALIGGGHAFGKTHGACPTGPGPNPMQQPWNPWPGTCGE--GPMKGKGNNTFTSGFEGPWTTNPIRWDNEYFVNLLKYDWKVYVGPGGHHQWEPVLKEDA-DPEDDLPDIIMLTTDVALLKDPIYLELVKLFAANQTALDIAFSHAWYKLVTRDMGPYSRCLGDQVPPPQPFQAPLPPPPAKIPDYKAVTKAITKALRVISPALPYDPVNGKPYYGALFATLAWQCASSFRQTDYTGGCNGARIRLAPQKDWPQNVAMDKVLKVLEPIKDSFPGLTYADLIVLAGNTALT-DAKAKGMRFCGGRSDADSDEPPVTVT----PQRVFNDKLVQLKDNAIVMGLTFREAVALKAMIRSPSQQQRLGYSGSWTDNPTRLSNEFFKVLLDNDWVNVTSAAGQLEMKAVGKEGVYMMPCDLAIKWDPVFAAIAQEFVTDSTAFYTAFASGWNKMMNADRFKGPAGNEC 709
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: D7G523_ECTSI (PEROXIDASE_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G523_ECTSI)

HSP 1 Score: 727 bits (1876), Expect = 1.120e-240
Identity = 362/525 (68.95%), Postives = 410/525 (78.10%), Query Frame = 1 
Query:  301 MGTTVKLGVLGTLALAT-SAFAGCPYLSGQKDQQSLDNNIGGERLLRAAGNKFGEMSEEMPEGSSYGEPDFSRETYDAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPD--VPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKD 1866
            M  T KLGVL  LALA   A A CP+L GQK  Q  D   G +R LR+  + +           S    DFSRETY+A++ADI A  TDSQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  WADNTNLDKAL +L PIKLKYGDA+SW DLITLTG+ +I SMGGP +GFCAGR DD SGFDSLELGP+PEQ EA APCA NGTCE PLG STVGLIYVNPEGP GVPDP  SA +IR+VF RMGMND+ETVALIGGGHAFGK HGAC TGPGPDP DAPEAPWPGTCGDPDSPTFGRAENTFTSGFEG WTVEP VWDN+YF+DLLEYDW+  ESP   +QW PV K+GAT+ +  +PDIIMLT+D+ALL+D+ YL +VE FA+D   LD AFAAAWYKL +RDMG + RC GTDV PPQDFQLPLP+AP DLP     KS I  +L +D SYP+LF TLA++CA+T+RSTD +GGCNGARIRF P+ +W  N GLDQ+   LE + +
Sbjct:    1 MSRTCKLGVLAALALAAVPASASCPFLGGQKGSQP-DLGTGVDRALRSYDDSY----------YSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKALTLLQPIKLKYGDAVSWGDLITLTGNEAIRSMGGPVLGFCAGRLDDASGFDSLELGPSPEQ-EAVAPCAVNGTCEFPLGTSTVGLIYVNPEGPLGVPDPAGSAADIRDVFGRMGMNDSETVALIGGGHAFGKFHGACATGPGPDPTDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGQWTVEPLVWDNAYFKDLLEYDWVMTESPADQVQWFPVLKEGATETEDEIPDIIMLTSDIALLYDEEYLALVELFASDLSYLDTAFAAAWYKLTSRDMGQFQRCVGTDVAPPQDFQLPLPEAPADLPDTDGAKSAIMSILSSDPSYPALFVTLAWQCASTYRSTDFLGGCNGARIRFSPERDWASNQGLDQLQARLEDLAE 513
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: A0A8J4GQV7_9CHLO (PEROXIDASE_4 domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GQV7_9CHLO)

HSP 1 Score: 706 bits (1823), Expect = 7.000e-238
Identity = 362/654 (55.35%), Postives = 442/654 (67.58%), Query Frame = 1 
Query:  526 DAIRADIQAALTDSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAILTPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLELGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAPEIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPDVP--DIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKS-------TIAHVLDNDTS-----YPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYTEDNGVVSNLYYNLLLTETWEEVPGSNGE-EYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVLMNADRFDGPTGNVC 2442
            DA++AD++A   DS+D WPADFG+YGPLMIR+AWHCAG+YR SDGRGGCDGGR RF PE  WADN NLDKA  +L PIK KYG+A++W DLI L GD +I SMGGP +GFCAGR DD  G  SL LGP+ +Q E  APC+ NG CE PLGAST+ LIYVNPEGP  VPDP  SAP+IREVF RM MND+ETVALIGGGHAFGKVHGACPTGPGP P + P  PWPGTCG+      G+  NTFTSGFEG WT  P  WDN YFQ+LLEYDW     PGG  QW PV KK ++DP  P  +I+MLT DVALL D  YL +V+ FA +Q ALD+AF+ AWYKLVTRDMGP+ RC G  VPPPQ FQ PLP  P   P +K V         T +  L  DT      Y +LF TLA++CA+ FR TD  GGCNGARIRF PQ +W  N  +D+V+ +L P+K  FP ++YADLIVLAG+ AL   A    + +C GR DA   +PN       +P R +   ++ ++D   + GLT+R+MVA   R RS +    LG+SGS+TE+  +++N Y+ +LL   W     + G+ E ++V   G+Y++ TDLA+ WDP   A   E+A D+  FL  F   W  LM ADRF GP GN C
Sbjct:  101 DAVKADLKALFVDSKDSWPADFGHYGPLMIRMAWHCAGTYRQSDGRGGCDGGRQRFDPERSWADNVNLDKARGLLWPIKQKYGNALTWGDLIILAGDAAIESMGGPILGFCAGRIDDADGTASLPLGPSLDQ-EMVAPCSVNGDCEAPLGASTMSLIYVNPEGPMAVPDPEKSAPQIREVFARMSMNDSETVALIGGGHAFGKVHGACPTGPGPSPAEQPWNPWPGTCGN--GTMKGKGNNTFTSGFEGPWTTNPIRWDNEYFQNLLEYDWEVHIGPGGHHQWRPV-KKNSSDPSEPVANIMMLTTDVALLKDPSYLELVKLFATNQTALDIAFSHAWYKLVTRDMGPHSRCLGDHVPPPQPFQAPLPPPPAKKPDYKAVXXXXXXXLRTASSALPGDTVGGKPYYGALFATLAWQCASNFRQTDYTGGCNGARIRFAPQKDWPQNVAMDRVLAVLAPIKASFPSLTYADLIVLAGSTALT-DAKAHKIKFCGGRSDA---NPNETPFPF-QPPRVFGNKLVQLKDNALVMGLTLREMVAQQARLRSPSQQRRLGYSGSWTENPSLLTNDYFKVLLNNDWVNTTSAAGQLEMKAVGKEGIYMMPTDLAVKWDPASAAIAQEFATDSTAFLAAFASGWNKLMVADRFKGPAGNEC 745
[Close]
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Match: A0A6H5JP97_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP97_9PHAE)

HSP 1 Score: 688 bits (1776), Expect = 1.370e-235
Identity = 328/436 (75.23%), Postives = 370/436 (84.86%), Query Frame = 1 
Query: 1135 VHGACPTGPGPDPFDAPEAPWPGTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEESPGGPIQWIPVPKKGATDPDVPDIIMLTADVALLFDDIYLPIVEYFAADQDALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSFKQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPPQSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTLSYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMVALAGRPRSTTYMTGLGFSGSYTEDNGVVSNLYYNLLLTETWEEVPGSNGEEYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVLMNADRFDGPTGNVC 2442
            +HGACPTGPGPDPFDAPEAPWPGTCGDPDS TFGRAENTFTSGFEGAWT  PTVWDNSYF DLLEYDWIQ ESP G IQWIPV K+GAT+ DVPDIIMLT+DVALL D  YL IVE FAADQ ALDVAF+ AWYKLVTRDMGP+ RC GTDVPPPQDFQLPL D P DLPS+   K  I H+L  +++Y   F TLAY+CA+TFRSTD +GGCNGARIRFPPQSEW  N GL  V+ LL+PVKD++P+ISYADLIVLAG+V+LK G ++P LSYC+GRVDA  DDPN++LLS+LEP REY+ VI+GVRDRMKIAGL+V QMVALAGRPRS++ MT LG+SGSYTED+ V+SN  Y LLLTE WEEVPG +G+EYQ+V   GVYVL TDLALVWDPEFKAQ + YAQDND F +EFG AWT LMNADRFDGPTG++C
Sbjct:    1 MHGACPTGPGPDPFDAPEAPWPGTCGDPDSATFGRAENTFTSGFEGAWTEAPTVWDNSYFVDLLEYDWIQAESPAGNIQWIPVLKEGATETDVPDIIMLTSDVALLMDPEYLAIVEEFAADQYALDVAFSNAWYKLVTRDMGPHSRCVGTDVPPPQDFQLPLADTPRDLPSYSGAKKAIGHILSEESTYAPRFVTLAYQCASTFRSTDYMGGCNGARIRFPPQSEWASNAGLSTVLDLLQPVKDEYPDISYADLIVLAGHVSLKQGGSVPNLSYCKGRVDAERDDPNNSLLSVLEPTREYDGVIVGVRDRMKIAGLSVAQMVALAGRPRSSSLMTDLGYSGSYTEDDAVLSNTLYTLLLTEDWEEVPGMDGKEYQAVGKSGVYVLDTDLALVWDPEFKAQSILYAQDNDYFRHEFGSAWTALMNADRFDGPTGSMC 436
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXZ4_9PHAE0.000e+069.22KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LN39_ECTSI5.220e-27365.76Catalase is an enzyme, present in all aerobic cell... [more]
D7G7J0_ECTSI6.990e-27075.39Catalase is an enzyme, present in all aerobic cell... [more]
D7G6M6_ECTSI1.630e-24869.77Catalase decomposes hydrogen peroxide to molecular... [more]
A0A8J4F3U4_9CHLO3.380e-24856.97PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]
A0A8J4G544_9CHLO2.140e-24355.83PEROXIDASE_4 domain-containing protein n=1 Tax=Vol... [more]
A0A8J4B542_9CHLO1.890e-24256.05PEROXIDASE_4 domain-containing protein n=2 Tax=Vol... [more]
D7G523_ECTSI1.120e-24068.95PEROXIDASE_4 domain-containing protein n=1 Tax=Ect... [more]
A0A8J4GQV7_9CHLO7.000e-23855.35PEROXIDASE_4 domain-containing protein n=2 Tax=Vol... [more]
A0A6H5JP97_9PHAE1.370e-23575.23KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:853850..861949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score733.0
Seed ortholog evalue1.3e-208
Seed eggNOG ortholog2880.D7G523
Preferred namekatG
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
EggNOG free text desc.catalase activity
EggNOG OGs2QTDY@2759,COG0685@1
Ec32 ortholog descriptionCatalase
Ec32 orthologEc-02_000470.1
EC1.11.1.21
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons14
Model size3654
Cds size2148
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1196.1prot_C-linearis_contig11.1196.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 855056..861253 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927436.996439-UTR-C-linearis_contig11:853849..8550551622927436.996439-UTR-C-linearis_contig11:853849..855055Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 853850..855055 -
1690879699.2852204-UTR-C-linearis_contig11:853849..8550551690879699.2852204-UTR-C-linearis_contig11:853849..855055Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 853850..855055 -
1622927437.1748788-UTR-C-linearis_contig11:861253..8612811622927437.1748788-UTR-C-linearis_contig11:861253..861281Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 861254..861281 -
1690879699.4265935-UTR-C-linearis_contig11:861253..8612811690879699.4265935-UTR-C-linearis_contig11:861253..861281Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 861254..861281 -
1622927437.188365-UTR-C-linearis_contig11:861677..8619491622927437.188365-UTR-C-linearis_contig11:861677..861949Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 861678..861949 -
1690879699.4349072-UTR-C-linearis_contig11:861677..8619491690879699.4349072-UTR-C-linearis_contig11:861677..861949Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 861678..861949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927437.008602-CDS-C-linearis_contig11:855055..8553241622927437.008602-CDS-C-linearis_contig11:855055..855324Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 855056..855324 -
1690879699.2962468-CDS-C-linearis_contig11:855055..8553241690879699.2962468-CDS-C-linearis_contig11:855055..855324Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 855056..855324 -
1622927437.0187535-CDS-C-linearis_contig11:855673..8560161622927437.0187535-CDS-C-linearis_contig11:855673..856016Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 855674..856016 -
1690879699.3051345-CDS-C-linearis_contig11:855673..8560161690879699.3051345-CDS-C-linearis_contig11:855673..856016Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 855674..856016 -
1622927437.03783-CDS-C-linearis_contig11:856307..8566111622927437.03783-CDS-C-linearis_contig11:856307..856611Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 856308..856611 -
1690879699.314348-CDS-C-linearis_contig11:856307..8566111690879699.314348-CDS-C-linearis_contig11:856307..856611Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 856308..856611 -
1622927437.0498877-CDS-C-linearis_contig11:856900..8569771622927437.0498877-CDS-C-linearis_contig11:856900..856977Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 856901..856977 -
1690879699.3235884-CDS-C-linearis_contig11:856900..8569771690879699.3235884-CDS-C-linearis_contig11:856900..856977Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 856901..856977 -
1622927437.0636177-CDS-C-linearis_contig11:857258..8574201622927437.0636177-CDS-C-linearis_contig11:857258..857420Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 857259..857420 -
1690879699.3328927-CDS-C-linearis_contig11:857258..8574201690879699.3328927-CDS-C-linearis_contig11:857258..857420Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 857259..857420 -
1622927437.0760472-CDS-C-linearis_contig11:857668..8578321622927437.0760472-CDS-C-linearis_contig11:857668..857832Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 857669..857832 -
1690879699.3426807-CDS-C-linearis_contig11:857668..8578321690879699.3426807-CDS-C-linearis_contig11:857668..857832Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 857669..857832 -
1622927437.0924337-CDS-C-linearis_contig11:858154..8582831622927437.0924337-CDS-C-linearis_contig11:858154..858283Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 858155..858283 -
1690879699.3525913-CDS-C-linearis_contig11:858154..8582831690879699.3525913-CDS-C-linearis_contig11:858154..858283Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 858155..858283 -
1622927437.1029587-CDS-C-linearis_contig11:858479..8585581622927437.1029587-CDS-C-linearis_contig11:858479..858558Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 858480..858558 -
1690879699.3607721-CDS-C-linearis_contig11:858479..8585581690879699.3607721-CDS-C-linearis_contig11:858479..858558Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 858480..858558 -
1622927437.1144235-CDS-C-linearis_contig11:858896..8590821622927437.1144235-CDS-C-linearis_contig11:858896..859082Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 858897..859082 -
1690879699.3712404-CDS-C-linearis_contig11:858896..8590821690879699.3712404-CDS-C-linearis_contig11:858896..859082Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 858897..859082 -
1622927437.1250148-CDS-C-linearis_contig11:859323..8593751622927437.1250148-CDS-C-linearis_contig11:859323..859375Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 859324..859375 -
1690879699.383424-CDS-C-linearis_contig11:859323..8593751690879699.383424-CDS-C-linearis_contig11:859323..859375Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 859324..859375 -
1622927437.138898-CDS-C-linearis_contig11:859637..8596831622927437.138898-CDS-C-linearis_contig11:859637..859683Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 859638..859683 -
1690879699.3952882-CDS-C-linearis_contig11:859637..8596831690879699.3952882-CDS-C-linearis_contig11:859637..859683Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 859638..859683 -
1622927437.151535-CDS-C-linearis_contig11:859953..8602001622927437.151535-CDS-C-linearis_contig11:859953..860200Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 859954..860200 -
1690879699.40708-CDS-C-linearis_contig11:859953..8602001690879699.40708-CDS-C-linearis_contig11:859953..860200Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 859954..860200 -
1622927437.1632726-CDS-C-linearis_contig11:861163..8612531622927437.1632726-CDS-C-linearis_contig11:861163..861253Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 861164..861253 -
1690879699.4166532-CDS-C-linearis_contig11:861163..8612531690879699.4166532-CDS-C-linearis_contig11:861163..861253Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 861164..861253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1196.1

>prot_C-linearis_contig11.1196.1 ID=prot_C-linearis_contig11.1196.1|Name=mRNA_C-linearis_contig11.1196.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=716bp
MGTTVKLGVLGTLALATSAFAGCPYLSGQKDQQSLDNNIGGERLLRAAGN
KFGEMSEEMPEGSSYGEPDFSRETYDAIRADIQAALTDSQDFWPADFGNY
GPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWADNTNLDKALAIL
TPIKLKYGDAISWADLITLTGDVSIVSMGGPSIGFCAGRQDDESGFDSLE
LGPTPEQQEATAPCANNGTCEVPLGASTVGLIYVNPEGPEGVPDPTLSAP
EIREVFVRMGMNDTETVALIGGGHAFGKVHGACPTGPGPDPFDAPEAPWP
GTCGDPDSPTFGRAENTFTSGFEGAWTVEPTVWDNSYFQDLLEYDWIQEE
SPGGPIQWIPVPKKGATDPDVPDIIMLTADVALLFDDIYLPIVEYFAADQ
DALDVAFAAAWYKLVTRDMGPYVRCAGTDVPPPQDFQLPLPDAPEDLPSF
KQVKSTIAHVLDNDTSYPSLFTTLAYRCAATFRSTDLIGGCNGARIRFPP
QSEWEVNTGLDQVIGLLEPVKDKFPEISYADLIVLAGNVALKMGAALPTL
SYCRGRVDALEDDPNHALLSILEPLREYETVIIGVRDRMKIAGLTVRQMV
ALAGRPRSTTYMTGLGFSGSYTEDNGVVSNLYYNLLLTETWEEVPGSNGE
EYQSVDTPGVYVLATDLALVWDPEFKAQVVEYAQDNDLFLYEFGMAWTVL
MNADRFDGPTGNVCY*
back to top

mRNA from alignment at C-linearis_contig11:853850..861949-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1196.1 ID=mRNA_C-linearis_contig11.1196.1|Name=mRNA_C-linearis_contig11.1196.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8100bp|location=Sequence derived from alignment at C-linearis_contig11:853850..861949- (Chordaria linearis ClinC8C monoicous)
ATTAATTGCCGACCGGCGGAAAAAACACAGCAACGCGCCGACATGCCGAA
GGTTCAGCTTGCGACCTTGGGCCTCTCTGCACGGTCGCAACTACCCACAG
CAAACAATTGAGAGCGCAGCTATACTTTCCGCATCTTCTCGGCGAGATAC
GGACACGGTGACGAGCCGATACTCCGGAAACTGGGCAACAAGGCGATTGC
TGTCAGACCTCCAACTGGATCCGCGCCCCACATATTCACTCACACAAGAC
GTACCCTGACAAAGCTGTCCAGGTGAGACGCGTGCGAGGTCGAAATACTG
ATCTAAGTCGAGAGGCTGGTGGAGAGGGGGACAAAGAGAGTCCCAACCCT
GAGTTAGGCAACCACTGCTGTTGTGTATAGTGTTACTTGCTGCGCACAGG
CGCCACGCCTGCATCAGTTTAGACGGAAAGGGAGTCAGTTGCCTCTTTTC
CTTGCGCTTGCCAAACGTTCCCCAGGAAGCGGCGCGCGTCCTCTTACAGC
AGAAGTTCACCTCTCGGCCTCCCACACCCAACCCTGTCCCGTTTATTCCG
CCTTGTAGCGCATTGTCGTGAACGCCAATGTGTTTCGGATTGCCTTCTAA
TCTAAGCCGAATCCTACTCCTGCTGCTGTACCCACTCATCTCGGCTCTCT
ACGCTTAACTGCAAAAAGACAAACCGCTCCTCGAGATCGCACCAAGATGG
GGACCACCGTGAAGCTCGGAGTGCTCGGCACTCTCGCTTTGGCTACGTCG
GCCTTCGCCGGCTGCCCGTACCTCTCCGGACAAAAGGTAAGTCATGGTGG
CAGGGCCTAGATGCACGTCGGAGAAGGCTGGAGGAGGACGCATAGTCTAG
ACTATGTGCATCTACGTTCAATTTTAGCAAAAACTTCATCCGCAATTCGA
CTTCAAACCACGGACAAGCCAACCCGTTTGTTTTCCCTTCTCCCTCCCAG
AATGTATCCCGACGCTGAAGGCACTCTTGACGGAGCTACAACGGTTGTGT
AGCGCACGATTCGTTGGCGGGTGCATCTCCACCCACATCCACATGTGACA
GACAAAAAATGCACAGCGTAGCCAGCCAGCCGCGACAAAATTTCCCTCAA
CATCCCGCAGTTAGTTACCCAGACACACCGAAACTCGAAGATACGACTTA
TCGACTTATCCCATACAGCACAGACGAAGAGCGCGGGTCGAGCACTGCTC
AGCATTTCTAGCTCCCCCCAGGGATGAAAGTATTGTTGTCCAGTTGATAT
ATATAATCTATGTATCTTACTCAACGGGGAGGCTGTGTGGTGTACCGCTG
CTGCTACTGCAGACCATGCCGTACACTATTTTTTGGTCGCGACCGTTCTC
GAATGCACTTCGTTGATTGAAACCTACGCGTCGTGCAGCATACATGAGGT
GCGTTGGCCCCGTGCGTGCCCTGTTTAGATGCGATTACTAACACCAGCGC
AAATTGAATGAATCACGATCCAAGGGGTGCTTCAAGTCCAAACCTACATC
ATGAGCGAATCGTTGGAACCCATCCAATACGTACAAAAACAGGAACGCAT
ACTCCGTAGCCTACGGTTGACAACGCCGCAGTACTTACGGACGCTTAACT
TTTAAATTGTCTAGAAAGGGCTGCAACAAAAAACTATGCATGTCTCTGAG
GATCCGATGCACCCGCCTCCTCCTCCGCCTGCTCGTCCTCCTCGTCCTCC
TAAATACGTTTCGAACGTCGACACCCGTGGCCGCTAAAAATGATTACAGG
ACCAGCAATCCCTGGACAACAACATCGGAGGAGAGCGCCTGCTTCGGGCC
GCGGGGAACAAGTTCGGAGAAATGTCGGAAGAAATGCCGGAAGGCAGCAG
CTACGGAGAGCCTGACTTCTCGCGCGAGACATACGACGCCATCCGGGCCG
ACATCCAGGCAGCGCTCACCGACTCCCAAGACTTCTGGCCCGCGGATTTC
GGGAACTACGGGCCCCTGATGATCCGGCTCGCATGGCACTGTGCCGGTGA
GATAAAAACAAACGAGAAGGCATTCTGCCGGGCACGTCAACACACCAATA
TAGCACTTCTTTCAAAAGAGTTTAGATGTCCGAGGTGCCCTCTATGTTGG
GATCTACCCTCGTCTGGTGGCCTTGGCACAGAATGAATGCGTAACGCTTT
GCCTCTCCGTCTCGGGTGAGATGTTTGCACCATTTCTTCAGCTCGTTTCA
GACGCCCACCTTTCTGTCGCCAATAACGCATTTGCATATGATGATTTCTT
TTTCTGGTGATAACAGGAAGCTACCGTTCGTCGGACGGGCGTGGAGGCTG
CGACGGCGGCAGGTAGGCCGTCTTCCCACAAGTAACTCAATATGCTGTCG
CATGGTGTGTACATACTTCGAAGTACATGCTTTGTGTGATCTGATCGGTC
GCGAGACGGTCAAGAAAAAGGAAGATTGCTCCCCGAGAGCGCTTCTTGTT
GTTCATGTAGCAGCGTAAATGTCGTTACGATAACCCTCCTTTGTTGCAGC
TTTGGCGGCCGGAATCCGTTTCCGATCGTGTTTTCTCCCCGTTCATCTAC
TCCACTCCCTCTCCGAATACCTAGGATTCGCTTCTTCCCTGAGCACGGCT
GGGCCGACAACACCAACCTTGACAAGGTGGGTGAATGGGTGGACGTGGCT
CACTTTGAAACCACGAAAAGGATGGTATGCACCATGCACGGTACAGGGGA
AGATATGTGCGACCTCCATCTCGACGCGGACTAGACCCAGGATCGCATGA
CGTCTTCGAAAACGTGTTTGACCTTTCCCCGGAGTTTTAATGGCTCGTTA
ATCTTTCCACCTGTTCTATGCCTCTAATGCTCATTTTACCCTTGTTGCTC
GCTTGTGTACTCGGCAGGCGCTGGCCATTCTGACGCCGATCAAGCTCAAG
TACGGCGACGCCATCTCCTGGGCAGACCTCATCACCCTCACGGGAGACGT
TTCCATCGTCTCCATGGGCGGCCCCAGCATCGGCTTCTGCGCCGGACGCC
AGGACGACGAGTCCGGCTTCGACAGCCTCGAGCTCGGCCCGACCCCAGAA
CAGGTGTGTAGGTTTGCCGCATGGTGTCTGCCTACGTTTTGTTTGTAATT
CCCGGTGTGAAGAATGTCTTCCGCGTGATTAGTTCCTGATCTTGGTGGTT
GGCTGCCTTTCAAAGATTGCATGTTGAAGAATCGAGGATACCGCCCTTGA
CACGGTCATGCTAGCATGCACTGTTTAATCCTTGTACTGAATTGCCAACT
TGTGCTTCAAAGACGTTGATGGCTCTACATCTCGATCTGGACAAGGGTTG
CTTGCAGTATTTTGAAGTTGACGACGGTTCGGGTGTTATCGTTGTTTTTT
GGTGTCCTCAACAATGCCACCTTGAACGCTTACAACTTGAGCAGGAGGCG
ACTGCTCCCTGCGCCAACAACGGCACCTGCGAGGTTCCTCTCGGCGCCAG
CACGGTTGGGCTCATCTACGGTGAGTCTTTGAGCACCCACGTTTGTTTGT
GGAGGTGGCTGAAAGTACTGCTTTGCGAGCTTGGTCCAAACATGTTTCAA
GCCTGACACAGCGGGATAAGCAGACAAGCATGTGAAACCCGTATCCCCTT
GGTCACCCTCGACACGCTGCTATTGCCGTGCCTCCTTCCCCAATGGTGTC
GATTTGCGTCGTGCAGTTAACCCCGAAGGACCGGAGGGTGTCCCTGACCC
TACCCTCAGCGCCCCCGAGATCCGCGAAGTGTTCGTGCGGATGGGAATGA
ACGACACCGAGACCGTGGCGCTCATCGGCGGTGGCCACGCGTTTGGTGCG
TTCCTTTGACAACAACAAAGAGTTGCAAACCGTTACCGTTGGTATTGCCG
TCCCGACACCTTATCAAGGTCGATATCGGACTTTTGTCGGGTTGTCGACT
CGCTCTCTCATCTCCTATCCTCTCTCCCTTCTCTTCGCACCAAGCAATGC
GCGTGCCGCATTCCGGCGGTCGTACATCACTCGACTTCACCCCCCGTCTT
GCTCGCACCCTTCCCCACTCGCCCCGACTTTGCGCTCGACTAATCGCACT
TTCCAAACTCTTGCACGTTCTGTCGATGTGCCGTACTCGTTGATCTGTGC
TCTTCCGTTGTCTGTAGGTAAGGTCCACGGGGCATGCCCGACAGGCCCGG
GCCCCGACCCGTTTGACGCCCCCGAGGCCCCCTGGCCGGGAACGTGCGGT
GACCCCGACTCCCCGACGTTCGGCCGCGCCGAGAACACTTTCACCTCCGG
CTTCGAGGGAGCTTGGACGGTGGAGCCCACGGTGCGTTGATCGCTGCGTG
TGCGTGGTGTTGTGCGATCGTTTCGCACCCGTGCGGCTTGGTGTTTCAAT
TGGTTGGGACATTTGGGCCGTTAAATGCACCCCGTCTTGGTTGCCTCTAC
TTAGCGTCGTAGCCATGCGGCATGGCTTCATGCAACAAAGAAGCGGCGCC
GAAATTGTTCGTTTGTGAACAAGGGTGGATGGATGCTCACATCATGTTTT
GTGCGTTGGTTTCGATCTCGATTTTGAAGGTGTGGGATAACTCCTACTTC
CAAGACCTCCTGGAGTACGACTGGATCCAGGAGGAAAGCCCCGGTGGACC
CATCCAGTGGATCCCCGTCCCTAAGAAAGGCGCCACCGACCCGGACGTTC
CCGACATCATCATGCTCACCGCCGACGTCGCGCTGCTATTTGTGAGGACT
TTTGTCCAGCCTTTTTAGGTTGACTATTTGTTGACGTTATGTAAGGGACA
GAGAAAGCTCCAACACAACCCGCCACGTACGGCACGCGTATCGTAGGATT
CATCCGCCCTTGCTCAGAACACCTTGTGACCACGTCTCATCCACCATCGT
GGTGTAGCGAACACCGTAGGCCCTGTCGCACACCTCCTAACCTTCTTGCA
CTAAAACTCGACATCGGCACCCGCCCGACTCGTTGTATGATTGTCCCGCC
CGCGGCCTATTGAAACAATCAGGACGACATTTACCTACCCATCGTGGAAT
ACTTCGCCGCCGACCAAGACGCGTTGGACGTTGCCTTCGCCGCCGCTTGG
TGAGTTTGATGCCTGCACACCGCCGTGCCTGGTGCGTGAGTACTCCTGAG
GAAAGGAACTTAATTGTTTTTGGGGCCATCAAGTTGTCTGGCTTGTGTTT
GCGACTTGGAAGCATCGCGAGTGCCAATGCTGGCCTTGGACGGCCGCCCT
AGCGCCTCCATCCATTCCCAACTGCCAGTTTGCGTCGGCGAAGGCAGGCA
GAGCCTTTCATTCATGTTCGCATCTTACATGTGGTATTGGAAAATTAAAA
ATGAACGTGCCGATGAACGTATCCTTCTCCTCGAGCAGGTACAAGCTCGT
GACCCGCGACATGGGCCCCTACGTTCGCTGCGCCGGCACCGACGTACCCC
CCCCGCAAGACTTCCAGCTCCCGCTCCCAGACGCGCCGGAGGACCTCCCA
AGCTTCAAGCAAGTGAAGTCGACCATCGCCCATGTCCTGGACAACGACAC
GTCGTACCCCTCTCTCTTCACCACCCTGGCCTACCGGTGCGCCGCAACAT
TCCGCTCTACGGACTTGATCGGTGGCTGCAACGGAGCTAGGATCCGATTC
CCCCCTCAGAGCGAGTGGGAGGTCAACACCGGCCTGGACCAGGTAAGACC
TCTGAGTTCGCGGCTATGTGCAAGTACACCTTGCACGGTAGGCTGTGCGT
CTCATGCCCACGATGTCTGAGGGTTTTGGCTGTTGCACCGCTCAGTGCGC
TCCAATAATCTTCGCAAAGGCTTGGCGTGTGTGAGTGTGATTCCTCCCGT
TCCTGGTTCCGGACATCTGTGTGAGTGGGTCATCTACGTTCCTCTCGGAG
ACACGAATCCCTCATTTCGTGTATCTTACCTCAACTTTTTCCCGTTGGTG
CTTCTCCTGACGTAACGTTCGCTACACCACAAGGTGATTGGCCTGCTCGA
GCCCGTGAAGGACAAGTTCCCGGAAATATCCTACGCCGACCTAATCGTGC
TCGCGGGCAACGTGGCCCTCAAGATGGGCGCCGCTCTCCCCACCCTGTCG
TACTGCAGGGGCCGCGTTGATGCCCTGGAGGACGACCCCAACCACGCCCT
CCTCTCCATCCTCGAGCCTCTCCGGGAGTACGAGACCGTCATCATCGGCG
TTCGCGACCGCATGAAGATCGCCGGTCTTACTGTTAGGCAGATGGTGGCG
CTCGCGGGCCGCCCCCGCAGCACCACGTACATGACCGGCCTCGGGTTCAG
CGGCTCCTACACCGAAGACAACGGTGGTAAGTGAAAGGGGGTGATTTCGC
GAGCCTATGGTACCTGGTGTACCTATGAGGTCTCGTAGAGGTAAGGGTTC
AATACGCTCGTTCCCGGCCTTAATTCTGAGGTGAAGGACAGATTAATGAC
CTATAGGGCGTTCTGTGACGTGGTTAAGCCGCGCGGGGCGTTGTGAGCTT
GACCACTTCAAGGACACGGCAAAACCTATTTAATGTTGGCAGCTCAATGA
CACACGATGCTGCCATTGCTTGGTCTAGCTTCGATCGCTAATGATCAGTA
AATACGTAAATACCCTCTCTAACCTGAAGTGTGGTTACTACCCGCTGCCG
GTGCTCGCGTGCTCGTTCCAAGCAGTGGTGTCCAACCTCTACTACAACCT
CCTCCTCACCGAGACCTGGGAGGAAGTGCCCGGCTCCAACGGAGAGGAGT
ACCAGTCCGTCGACACCCCGGGCGTGTACGTCCTCGCTACGGACCTCGCC
CTGGTCTGGGACCCCGAGTTCAAGGCGCAGGTGGTCGAGTACGCCCAGGA
CAACGACCTGTTCCTGTACGAGTTCGGCATGGCGTGGACGGTTCTCATGA
ACGCCGACCGCTTCGACGGCCCCACGGGCAACGTGTGCTACTAGAATAAG
TCGATGTGATGCAACTTTAGCGTCGACGACACCGATGCAACTGCAGGGTC
GACAACACTGATCGGGCTGACTGGCATGCGTTGCGTTGTTGTATGTAGGC
TGATGAAATCTGAAGTTTTTTTCCGTTCTTCGCGGTTCTCTCGAGGGTTT
GGCTTGGGTTTCTTCAGCACGAGTGCGTGTATTTTATGTGGTACATCATG
TATATGTAATTCGTATATGGTTATGAGCCTCGAATTTGTTGGGTTGAGAC
ATCATAGATGTCACGATGGGGGCTTCCGCCCGAGAGCATCTGGTCAAATC
CTTCCTTGGAAGTTTGTAGCACGTGCATTCTTTGTTGAGGGATGATGTGC
TCGATATATGGGCCATATTTCTTGTCTGTCCGGGGCCGACGTGCTATCGT
CGAGTTTTGCCTAGTTTGTGGACTTTTCACCGAAGTATTATGTGGGAGTA
CGTAGACTAGCATTTTCTGAGTAGCGTTGAGCGTTCCAGGCACACGTTGA
TCGTGAAACGTATTCATTAATGGGAGGTTTTTGAGCTGGTGCAAATCGCG
TTTTGCGTGTGCCGGCTGATTAGTATTTTCGTTGTGTCACCGAGCGGGGG
GGCGATAGGCTAGCATCGAAAGCTGCGTGGTGCACCGTTGGCGCACAACG
TATTTTGTTGGAGTATTTTAGTATTGATGTTCTGCCCCACCTGGCTTAAA
GCGGATGCGTCAGTCGTCTTTGGGGGGATCCGGGGCCTGGGGAGCATTTG
GTTGGTGTCTATCGGCGCTTGACAAGAAGACTAAGATTTCGTTCCTTACT
TGCAAGTTGCTTTCGATTCTATCCACTTTTCTTCCCGTACCTTGGTTCAC
CGCTCATGATGCATGTATGTGGCGTGATACCAGATTCCACATATTATATT
ATTCTTGGGATACCAACTGCTGTCGTCCTGGATTCCTAGTCATGTACCAT
ATCGTCGGTGGTTGCCCTTGATGATCATGGCAAGAACTAACTGGTCGTTG
GGCTATTATTCACTCCTCCTTACTTAGGAGCTCTGTGAGGATGCAATACG
CTGTGGCTGAAAGCGAGTTCGAAAGCATGCCACGTGTGTTTCGCTTGATG
ATACAGAAGTGAGCAGAATGGAAACGAGGAGTAGAGATGATTAAATCTTG
ATACCAACCATATGGCAATACTTCGAAGTATGACTCTAAATGAAATCCAG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig11:853850..861949-

>mRNA_C-linearis_contig11.1196.1 ID=mRNA_C-linearis_contig11.1196.1|Name=mRNA_C-linearis_contig11.1196.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4296bp|location=Sequence derived from alignment at C-linearis_contig11:853850..861949- (Chordaria linearis ClinC8C monoicous)
ATGGGGACCACCGTGAAGCTCGGAGTGCTCGGCACTCTCGCTTTGGCTAC
GTCGGCCTTCGCCGGCTGCCCGTACCTCTCCGGACAAAAGATGGGGACCA
CCGTGAAGCTCGGAGTGCTCGGCACTCTCGCTTTGGCTACGTCGGCCTTC
GCCGGCTGCCCGTACCTCTCCGGACAAAAGGACCAGCAATCCCTGGACAA
CAACATCGGAGGAGAGCGCCTGCTTCGGGCCGCGGGGAACAAGTTCGGAG
AAATGTCGGAAGAAATGCCGGAAGGCAGCAGCTACGGAGAGCCTGACTTC
TCGCGCGAGACATACGACGCCATCCGGGCCGACATCCAGGCAGCGCTCAC
CGACTCCCAAGACTTCTGGCCCGCGGATTTCGGGAACTACGGGCCCCTGA
TGATCCGGCTCGCATGGCACTGTGCCGGACCAGCAATCCCTGGACAACAA
CATCGGAGGAGAGCGCCTGCTTCGGGCCGCGGGGAACAAGTTCGGAGAAA
TGTCGGAAGAAATGCCGGAAGGCAGCAGCTACGGAGAGCCTGACTTCTCG
CGCGAGACATACGACGCCATCCGGGCCGACATCCAGGCAGCGCTCACCGA
CTCCCAAGACTTCTGGCCCGCGGATTTCGGGAACTACGGGCCCCTGATGA
TCCGGCTCGCATGGCACTGTGCCGGAAGCTACCGTTCGTCGGACGGGCGT
GGAGGCTGCGACGGCGGCAGGAAGCTACCGTTCGTCGGACGGGCGTGGAG
GCTGCGACGGCGGCAGGATTCGCTTCTTCCCTGAGCACGGCTGGGCCGAC
AACACCAACCTTGACAAGGATTCGCTTCTTCCCTGAGCACGGCTGGGCCG
ACAACACCAACCTTGACAAGGCGCTGGCCATTCTGACGCCGATCAAGCTC
AAGTACGGCGACGCCATCTCCTGGGCAGACCTCATCACCCTCACGGGAGA
CGTTTCCATCGTCTCCATGGGCGGCCCCAGCATCGGCTTCTGCGCCGGAC
GCCAGGACGACGAGTCCGGCTTCGACAGCCTCGAGCTCGGCCCGACCCCA
GAACAGGCGCTGGCCATTCTGACGCCGATCAAGCTCAAGTACGGCGACGC
CATCTCCTGGGCAGACCTCATCACCCTCACGGGAGACGTTTCCATCGTCT
CCATGGGCGGCCCCAGCATCGGCTTCTGCGCCGGACGCCAGGACGACGAG
TCCGGCTTCGACAGCCTCGAGCTCGGCCCGACCCCAGAACAGCAGGAGGC
GACTGCTCCCTGCGCCAACAACGGCACCTGCGAGGTTCCTCTCGGCGCCA
GCACGGTTGGGCTCATCTACGCAGGAGGCGACTGCTCCCTGCGCCAACAA
CGGCACCTGCGAGGTTCCTCTCGGCGCCAGCACGGTTGGGCTCATCTACG
TTAACCCCGAAGGACCGGAGGGTGTCCCTGACCCTACCCTCAGCGCCCCC
GAGATCCGCGAAGTGTTCGTGCGGATGGGAATGAACGACACCGAGACCGT
GGCGCTCATCGGCGGTGGCCACGCGTTTGTTAACCCCGAAGGACCGGAGG
GTGTCCCTGACCCTACCCTCAGCGCCCCCGAGATCCGCGAAGTGTTCGTG
CGGATGGGAATGAACGACACCGAGACCGTGGCGCTCATCGGCGGTGGCCA
CGCGTTTGGTAAGGTCCACGGGGCATGCCCGACAGGCCCGGGCCCCGACC
CGTTTGACGCCCCCGAGGCCCCCTGGCCGGGAACGTGCGGTGACCCCGAC
TCCCCGACGTTCGGCCGCGCCGAGAACACTTTCACCTCCGGCTTCGAGGG
AGCTTGGACGGTGGAGCCCACGGTAAGGTCCACGGGGCATGCCCGACAGG
CCCGGGCCCCGACCCGTTTGACGCCCCCGAGGCCCCCTGGCCGGGAACGT
GCGGTGACCCCGACTCCCCGACGTTCGGCCGCGCCGAGAACACTTTCACC
TCCGGCTTCGAGGGAGCTTGGACGGTGGAGCCCACGGTGTGGGATAACTC
CTACTTCCAAGACCTCCTGGAGTACGACTGGATCCAGGAGGAAAGCCCCG
GTGGACCCATCCAGTGGATCCCCGTCCCTAAGAAAGGCGCCACCGACCCG
GACGTTCCCGACATCATCATGCTCACCGCCGACGTCGCGCTGCTATTTGT
GTGGGATAACTCCTACTTCCAAGACCTCCTGGAGTACGACTGGATCCAGG
AGGAAAGCCCCGGTGGACCCATCCAGTGGATCCCCGTCCCTAAGAAAGGC
GCCACCGACCCGGACGTTCCCGACATCATCATGCTCACCGCCGACGTCGC
GCTGCTATTTGACGACATTTACCTACCCATCGTGGAATACTTCGCCGCCG
ACCAAGACGCGTTGGACGTTGCCTTCGCCGCCGCTTGGACGACATTTACC
TACCCATCGTGGAATACTTCGCCGCCGACCAAGACGCGTTGGACGTTGCC
TTCGCCGCCGCTTGGTACAAGCTCGTGACCCGCGACATGGGCCCCTACGT
TCGCTGCGCCGGCACCGACGTACCCCCCCCGCAAGACTTCCAGCTCCCGC
TCCCAGACGCGCCGGAGGACCTCCCAAGCTTCAAGCAAGTGAAGTCGACC
ATCGCCCATGTCCTGGACAACGACACGTCGTACCCCTCTCTCTTCACCAC
CCTGGCCTACCGGTGCGCCGCAACATTCCGCTCTACGGACTTGATCGGTG
GCTGCAACGGAGCTAGGATCCGATTCCCCCCTCAGAGCGAGTGGGAGGTC
AACACCGGCCTGGACCAGGTACAAGCTCGTGACCCGCGACATGGGCCCCT
ACGTTCGCTGCGCCGGCACCGACGTACCCCCCCCGCAAGACTTCCAGCTC
CCGCTCCCAGACGCGCCGGAGGACCTCCCAAGCTTCAAGCAAGTGAAGTC
GACCATCGCCCATGTCCTGGACAACGACACGTCGTACCCCTCTCTCTTCA
CCACCCTGGCCTACCGGTGCGCCGCAACATTCCGCTCTACGGACTTGATC
GGTGGCTGCAACGGAGCTAGGATCCGATTCCCCCCTCAGAGCGAGTGGGA
GGTCAACACCGGCCTGGACCAGGTGATTGGCCTGCTCGAGCCCGTGAAGG
ACAAGTTCCCGGAAATATCCTACGCCGACCTAATCGTGCTCGCGGGCAAC
GTGGCCCTCAAGATGGGCGCCGCTCTCCCCACCCTGTCGTACTGCAGGGG
CCGCGTTGATGCCCTGGAGGACGACCCCAACCACGCCCTCCTCTCCATCC
TCGAGCCTCTCCGGGAGTACGAGACCGTCATCATCGGCGTTCGCGACCGC
ATGAAGATCGCCGGTCTTACTGTTAGGCAGATGGTGGCGCTCGCGGGCCG
CCCCCGCAGCACCACGTACATGACCGGCCTCGGGTTCAGCGGCTCCTACA
CCGAAGACAACGGTGGTGATTGGCCTGCTCGAGCCCGTGAAGGACAAGTT
CCCGGAAATATCCTACGCCGACCTAATCGTGCTCGCGGGCAACGTGGCCC
TCAAGATGGGCGCCGCTCTCCCCACCCTGTCGTACTGCAGGGGCCGCGTT
GATGCCCTGGAGGACGACCCCAACCACGCCCTCCTCTCCATCCTCGAGCC
TCTCCGGGAGTACGAGACCGTCATCATCGGCGTTCGCGACCGCATGAAGA
TCGCCGGTCTTACTGTTAGGCAGATGGTGGCGCTCGCGGGCCGCCCCCGC
AGCACCACGTACATGACCGGCCTCGGGTTCAGCGGCTCCTACACCGAAGA
CAACGGTGTGGTGTCCAACCTCTACTACAACCTCCTCCTCACCGAGACCT
GGGAGGAAGTGCCCGGCTCCAACGGAGAGGAGTACCAGTCCGTCGACACC
CCGGGCGTGTACGTCCTCGCTACGGACCTCGCCCTGGTCTGGGACCCCGA
GTTCAAGGCGCAGGTGGTCGAGTACGCCCAGGACAACGACCTGTTCCTGT
ACGAGTTCGGCATGGCGTGGACGGTTCTCATGAACGCCGACCGCTTCGAC
GGCCCCACGGGCAACGTGTGCTACTAGTGGTGTCCAACCTCTACTACAAC
CTCCTCCTCACCGAGACCTGGGAGGAAGTGCCCGGCTCCAACGGAGAGGA
GTACCAGTCCGTCGACACCCCGGGCGTGTACGTCCTCGCTACGGACCTCG
CCCTGGTCTGGGACCCCGAGTTCAAGGCGCAGGTGGTCGAGTACGCCCAG
GACAACGACCTGTTCCTGTACGAGTTCGGCATGGCGTGGACGGTTCTCAT
GAACGCCGACCGCTTCGACGGCCCCACGGGCAACGTGTGCTACTAG
back to top