mRNA_C-linearis_contig11.1194.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1194.1
Unique NamemRNA_C-linearis_contig11.1194.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A6H5KYY5_9PHAE (FGE-sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY5_9PHAE)

HSP 1 Score: 574 bits (1480), Expect = 1.060e-199
Identity = 288/360 (80.00%), Postives = 299/360 (83.06%), Query Frame = 2
Query:  152 SAGLSRDL---SGTSGGTSSSAVDGTTTA--------------EPAATA-AARDETAGGDMVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAA-------LEDGR-VPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            SAGLSRD       S G+SSSA D  T A              +P   A AA ++ A G MV V+ G FRFGTD PFI PDGEGPGR+T LP +YIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLS RQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVF DGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQG     VEAA        E GR VPRYPWGDDLTP GQHRAN+WQGTFPTLNLAEDGF YTSPVDAFP QNSLGLRDAVGNAWEWVEDWWTPDRSKYK++NPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSD+DSGTSNQGFRCAAD
Sbjct:   43 SAGLSRDSPRGGEVSSGSSSSARDAATAAPTAEEEEAPDGEACDPETEADAAGEDAAAGIMVLVEEGDFRFGTDRPFIIPDGEGPGRLTSLPSFYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSMRQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFRDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGD---PVEAAGEGXXXXXERGRAVPRYPWGDDLTPEGQHRANIWQGTFPTLNLAEDGFPYTSPVDAFPPQNSLGLRDAVGNAWEWVEDWWTPDRSKYKQNNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDVDSGTSNQGFRCAAD 399          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A7S4DBW2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBW2_HETAK)

HSP 1 Score: 349 bits (896), Expect = 2.490e-112
Identity = 179/349 (51.29%), Postives = 218/349 (62.46%), Query Frame = 2
Query:  119 EDEAAGAGCGCSAG-LSRDLSGTSGGTSSSAVDGTTTAEPAATAAARDETAGGDMVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGD--GRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPD-RSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            E+  A   CGC    LSRD   ++G       +    A   + A   ++++G +MVF+  G F  GTDNP I  D EGP R   L  Y++D++ V+N+++  FV  T Y TDSEK+GWSFVF  +L++ QQ  I QAVAG EWWLPVEG+ WR P GP  DV     G GNHP   VSW D+ A+CRWRGGRLP+EAEWE AA+GG + D EA         YPWG +L P G+HR N+WQG FP  N A+DG  + SPVDA   QN+ GL + VGNAWEWV DWW         + NP GPK G EK KKGGSFLCH +YC+RYR AART S  DS T N GFRC  D
Sbjct:   35 EETVASEDCGCGGSKLSRDAVWSNGKAQEEGKERINVATENSKARRLEDSSGAEMVFIPGGEFMMGTDNPVIVTDLEGPSRPVRLSSYWMDKYEVSNDQYAVFVDETGYLTDSEKFGWSFVFDKLLTQEQQDAIPQAVAGAEWWLPVEGSDWRHPAGPWEDVRDPAAGLGNHPVVQVSWTDSDAFCRWRGGRLPTEAEWEYAARGG-SQDWEAM--------YPWGRELMPDGRHRTNIWQGKFPHENTADDGHRFLSPVDALGEQNAYGLYNMVGNAWEWVSDWWAHQLHPTTLQINPTGPKHGLEKLKKGGSFLCHESYCFRYRIAARTPSTPDSATYNNGFRCVRD 374          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: D8LGF4_ECTSI (Zgc:136465 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF4_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 3.540e-109
Identity = 158/178 (88.76%), Postives = 162/178 (91.01%), Query Frame = 2
Query:  638 VSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALED-----GR-VPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            VSWNDAKAYCRWRGGRLPSEAEWERAAQG     VEAA E      GR +PRYPWGDDLTP GQHRAN+WQGTFPTLNLAEDGF YTSPVDAFP QNSLGLRDAVGNAWEWVEDWWTPDRSKYK++NPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD
Sbjct:   22 VSWNDAKAYCRWRGGRLPSEAEWERAAQGD---PVEAAGEGEGEERGRAMPRYPWGDDLTPEGQHRANIWQGTFPTLNLAEDGFPYTSPVDAFPPQNSLGLRDAVGNAWEWVEDWWTPDRSKYKQNNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 196          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A8D0GA61_SPHPU (Sulfatase modifying factor 1 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GA61_SPHPU)

HSP 1 Score: 337 bits (865), Expect = 4.890e-108
Identity = 166/301 (55.15%), Postives = 196/301 (65.12%), Query Frame = 2
Query:  251 ARDETAGGDMVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            AR    GG MV + AG F  GTD P I  DGEGP R   L  +Y+DR+ V+N  F +FV  T Y T++EKYG SFVF  MLSER + EI QAVA   WWLPV+GA WR PEGP +D+    R  HP  HVSWNDA AYC W G RLP+EAEWE + +GG    +E  L       +PWG+ L P  QH AN+WQG FPT N  EDGF  T+PV AFP  N  GL + VGNAWEW  DWW    S  +  NP+GP  GT+K KKGGS++CH +YCYRYR AAR+++  DS  SN GFRCAAD
Sbjct:   69 ARGTLVGGQMVSIPAGVFTMGTDEPAIQQDGEGPARRVRLSRFYMDRYEVSNAEFEKFVDATGYLTEAEKYGDSFVFEGMLSERVKTEIHQAVAAAPWWLPVKGANWRHPEGPDSDI--SNRMEHPVLHVSWNDAVAYCVWAGKRLPTEAEWEYSCRGG----LENRL-------FPWGNKLCPKRQHYANIWQGDFPTNNTGEDGFKGTAPVSAFPP-NGYGLYNVVGNAWEWTADWWAVHHSAEEMHNPKGPLSGTDKVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAAD 355          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A7K7VWV8_9AVES (SUMF1 enzyme (Fragment) n=4 Tax=Palaeognathae TaxID=8783 RepID=A0A7K7VWV8_9AVES)

HSP 1 Score: 334 bits (856), Expect = 6.940e-108
Identity = 161/292 (55.14%), Postives = 196/292 (67.12%), Query Frame = 2
Query:  278 MVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            MV V  G F  GTD P IP DGEGP R  H+  +Y+D++ V+NE F  FV +T Y T++EK+G SFVF  MLSE  + EIQQAVA   WWLPV+GA WR PEGP +++    R +HP  HVSWNDA A+C W G RLP+EAEWE + +GG    +E  L       +PWG+ L P GQH  N+WQG FPT N AEDG+  T+PV AFP  N  GL + VGNAWEW  DWW    S  +  NPRGP  GT+K KKGGS++CH +YCYRYR AAR+++  DS  SN GFRCAAD
Sbjct:    1 MVTVPEGVFTMGTDEPEIPQDGEGPARRVHVNTFYMDQYEVSNEDFEIFVNSTGYVTEAEKFGDSFVFEGMLSEEVKAEIQQAVAAAPWWLPVKGANWRHPEGPDSNILK--RMDHPVLHVSWNDALAFCTWAGKRLPTEAEWEYSCRGG----LENRL-------FPWGNKLQPKGQHYVNIWQGVFPTNNTAEDGYKGTAPVTAFPP-NGYGLYNIVGNAWEWTSDWWVVRHSADETRNPRGPSSGTDKVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAAD 278          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A7K4LTG9_9AVES (SUMF1 enzyme (Fragment) n=3 Tax=Tinamidae TaxID=8803 RepID=A0A7K4LTG9_9AVES)

HSP 1 Score: 333 bits (853), Expect = 1.960e-107
Identity = 160/292 (54.79%), Postives = 194/292 (66.44%), Query Frame = 2
Query:  278 MVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            MV V  G F  GTD P IP DGEGP R  H+  +Y+D++ V+NE F  FV +T Y T++EK+G SFVF  MLSE  + EI QAVA   WWLPV+GA WR PEGP +++    R NHP  HVSWNDA A+C W G RLP+EAEWE + +GG    +E  L       +PWG+ L P GQH  N+WQG FPT N AEDG+  T+PV AFP  N  GL + VGNAWEW  DWW    S  +  NP GP  GT+K KKGGS++CH +YCYRYR AAR+++  DS  SN GFRCAAD
Sbjct:    1 MVAVPGGVFMMGTDEPAIPQDGEGPARRVHVNTFYMDQYEVSNEDFEIFVNSTGYVTEAEKFGDSFVFEGMLSEEVKAEIHQAVAAAPWWLPVKGANWRHPEGPDSNILK--RMNHPVLHVSWNDAVAFCTWAGKRLPTEAEWEYSCRGG----LENRL-------FPWGNKLQPKGQHYVNIWQGVFPTNNTAEDGYKGTAPVTAFPP-NGYGLYNIVGNAWEWTSDWWVVHHSADETRNPGGPSSGTDKVKKGGSYMCHESYCYRYRCAARSQNTPDSSASNLGFRCAAD 278          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: UPI001AAD498D (formylglycine-generating enzyme n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD498D)

HSP 1 Score: 334 bits (857), Expect = 3.990e-107
Identity = 158/295 (53.56%), Postives = 198/295 (67.12%), Query Frame = 2
Query:  272 GDMVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAADA 1156
            G MV + +G+F  GTD+P IPPDGEGP R  H+  +Y+D + V+N  F  FV ++ + T++E +G SFVF  +LSE+ +  I QAVA   WWLPV+GA WR PEGP +D+    R +HP  HVSWNDA A+C W G RLPSEAEWE A +GG    +E  L       +PWG+ L P GQH AN+WQG FPT N  EDG+  TSPV AFP  N  GL + VGNAWEW  DWWT   S  +  NP+GP  G ++ KKGGS++CH +YCYRYR AAR+++  DS  SN GFRCAADA
Sbjct:   59 GGMVLLPSGAFSMGTDDPGIPPDGEGPARRVHIDSFYMDMYEVSNAEFSRFVEDSGHVTEAETFGDSFVFEGLLSEKVKSGIDQAVAAAPWWLPVKGADWRHPEGPDSDI-APHRLDHPVLHVSWNDAVAFCSWAGKRLPSEAEWEYACRGG----LENRL-------FPWGNKLEPKGQHHANLWQGDFPTTNTGEDGYVKTSPVTAFPP-NGFGLYNMVGNAWEWTADWWTTQHSADEARNPKGPISGKDRVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAADA 340          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A7K7L4R3_9AVES (SUMF1 enzyme (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K7L4R3_9AVES)

HSP 1 Score: 332 bits (850), Expect = 6.790e-107
Identity = 159/293 (54.27%), Postives = 195/293 (66.55%), Query Frame = 2
Query:  278 MVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAADA 1156
            MV +  G F  GTD P I  DGEGP R   L G+Y+D+  V+NE F  FV  T Y T++EK+G SFVF  MLSE  + EI QAVA   WWLPV+GA W+ PEGP +++F   R +HP  HVSWNDA A+C W G RLP+EAEWE + +GG    +E  L       +PWG+ L P GQH AN+WQG FP+ N AEDG+  T+PV AFP  N  GL + VGNAWEW  DWW    S  +  NP+GP  GT+K KKGGS++CH +YCYRYR AAR+++  DS  SN GFRCAADA
Sbjct:    2 MVAIPGGVFTMGTDEPEIRQDGEGPARRVRLNGFYMDQHEVSNEDFERFVNATGYLTEAEKFGDSFVFEGMLSEEVKSEIHQAVAAAPWWLPVKGASWKHPEGPDSNIFN--RMDHPVLHVSWNDAVAFCTWAGKRLPTEAEWEYSCRGG----LENRL-------FPWGNKLQPKGQHYANIWQGVFPSNNTAEDGYKGTAPVTAFPP-NGYGLYNIVGNAWEWTSDWWAVQHSAEEAHNPKGPSSGTDKVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAADA 280          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A7K7UZ37_EUDEL (SUMF1 enzyme (Fragment) n=4 Tax=Aves TaxID=8782 RepID=A0A7K7UZ37_EUDEL)

HSP 1 Score: 331 bits (849), Expect = 7.810e-107
Identity = 160/292 (54.79%), Postives = 195/292 (66.78%), Query Frame = 2
Query:  278 MVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            MV V  G F  GTD P IP DGEGP R  +L  +Y+D++ V+NE F  FV +T Y T++EK+G SFVF  MLSE  + EI QAVA   WWLPV+GA WR PEGP +++    R +HP  HVSWNDA A+C W G RLP+EAEWE + +GG    +E  L       +PWG+ L P GQH  N+WQG FPT N AEDG+  T+PV AFP  N  GL + VGNAWEW  DWW    S  +  NPRGP  GT+K KKGGS++CH +YCYRYR AAR+++  DS  SN GFRCAAD
Sbjct:    1 MVAVPGGVFTMGTDEPEIPQDGEGPARRVYLNTFYMDQYEVSNEDFEIFVNSTGYVTEAEKFGDSFVFEGMLSEEVKAEIHQAVAAAPWWLPVKGANWRHPEGPDSNILK--RMDHPVLHVSWNDAVAFCTWAGKRLPTEAEWEYSCRGG----LENRL-------FPWGNKLQPKGQHYINIWQGVFPTNNTAEDGYKGTAPVTAFPP-NGYGLYNIVGNAWEWTSDWWVVHHSADETRNPRGPSSGTDKVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAAD 278          
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Match: A0A7K4IYP0_GEOCA (SUMF1 enzyme (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K4IYP0_GEOCA)

HSP 1 Score: 331 bits (848), Expect = 1.450e-106
Identity = 156/292 (53.42%), Postives = 196/292 (67.12%), Query Frame = 2
Query:  278 MVFVDAGSFRFGTDNPFIPPDGEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPMLSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHVSWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGDDLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGNAWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPAARTKSDIDSGTSNQGFRCAAD 1153
            MV +  G+F  GTD P I  DGE P R  H+  +Y+D++ V+NE F  FV +T Y T++EK+G SFVF  MLSE  + +I QAVA   WWLPV+GA W+ PEGP +++    R +HP  HVSWNDA A+C W G RLP+EAEWE + +GG        LE+ R   +PWG+ L P GQH AN+WQG FPT N AEDG+  T+PV AFP  N  GL + VGNAWEW  DWW    S  +  NP+GP  GT++ KKGGS++CH TYCYRYR AAR+++  DS  SN GFRCAAD
Sbjct:    2 MVAIPGGAFTMGTDEPEIQQDGEWPARKVHINSFYMDQYEVSNEEFERFVNSTGYVTEAEKFGDSFVFEGMLSEEVKADIHQAVAAAPWWLPVKGANWKHPEGPDSNI--SNRMDHPVLHVSWNDAVAFCMWAGKRLPTEAEWEYSCRGG--------LEN-RYLLFPWGNKLQPKGQHYANIWQGVFPTNNTAEDGYKGTAPVSAFPP-NGYGLYNIVGNAWEWTSDWWAVHHSTEEVHNPKGPSSGTDRVKKGGSYMCHKTYCYRYRCAARSQNTPDSSASNLGFRCAAD 281          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYY5_9PHAE1.060e-19980.00FGE-sulfatase domain-containing protein n=1 Tax=Ec... [more]
A0A7S4DBW2_HETAK2.490e-11251.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LGF4_ECTSI3.540e-10988.76Zgc:136465 protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A8D0GA61_SPHPU4.890e-10855.15Sulfatase modifying factor 1 n=1 Tax=Sphenodon pun... [more]
A0A7K7VWV8_9AVES6.940e-10855.14SUMF1 enzyme (Fragment) n=4 Tax=Palaeognathae TaxI... [more]
A0A7K4LTG9_9AVES1.960e-10754.79SUMF1 enzyme (Fragment) n=3 Tax=Tinamidae TaxID=88... [more]
UPI001AAD498D3.990e-10753.56formylglycine-generating enzyme n=1 Tax=Rana tempo... [more]
A0A7K7L4R3_9AVES6.790e-10754.27SUMF1 enzyme (Fragment) n=3 Tax=Neognathae TaxID=8... [more]
A0A7K7UZ37_EUDEL7.810e-10754.79SUMF1 enzyme (Fragment) n=4 Tax=Aves TaxID=8782 Re... [more]
A0A7K4IYP0_GEOCA1.450e-10653.42SUMF1 enzyme (Fragment) n=3 Tax=Neognathae TaxID=8... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:807291..813687 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score326.6
Seed ortholog evalue1.7e-86
Seed eggNOG ortholog9707.XP_004399492.1
Preferred nameSUMF1
KEGG koko:K13444
KEGG Pathwayko04142,map04142
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006464,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006687,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0031974,GO:0036211,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114,GO:0070013,GO:0071704,GO:0120147,GO:1901135,GO:1901564,GO:1903135,GO:1903509
EggNOG free text desc.factor 1
EggNOG OGs2QVDG@2759,38C17@33154,3B9T4@33208,3CX3Y@33213,3ESW1@33554,3JC51@40674,4819N@7711,48WT5@7742,COG1262@1
Ec32 ortholog descriptionC-type lectin fold
Ec32 orthologEc-16_003850.1
EC1.8.3.7
COG Functional cat.S
Best tax levelCarnivora
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons9
Model size1755
Cds size1257
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927436.5714645-UTR-C-linearis_contig11:807290..8073301622927436.5714645-UTR-C-linearis_contig11:807290..807330Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 807291..807330 +
1690879699.0265193-UTR-C-linearis_contig11:807290..8073301690879699.0265193-UTR-C-linearis_contig11:807290..807330Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 807291..807330 +
1622927436.7197342-UTR-C-linearis_contig11:813229..8136871622927436.7197342-UTR-C-linearis_contig11:813229..813687Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 813230..813687 +
1690879699.1302307-UTR-C-linearis_contig11:813229..8136871690879699.1302307-UTR-C-linearis_contig11:813229..813687Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 813230..813687 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927436.5851643-CDS-C-linearis_contig11:807330..8073941622927436.5851643-CDS-C-linearis_contig11:807330..807394Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 807331..807394 +
1690879699.040595-CDS-C-linearis_contig11:807330..8073941690879699.040595-CDS-C-linearis_contig11:807330..807394Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 807331..807394 +
1622927436.5988193-CDS-C-linearis_contig11:807892..8081251622927436.5988193-CDS-C-linearis_contig11:807892..808125Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 807893..808125 +
1690879699.050485-CDS-C-linearis_contig11:807892..8081251690879699.050485-CDS-C-linearis_contig11:807892..808125Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 807893..808125 +
1622927436.6147542-CDS-C-linearis_contig11:808600..8086531622927436.6147542-CDS-C-linearis_contig11:808600..808653Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 808601..808653 +
1690879699.0606256-CDS-C-linearis_contig11:808600..8086531690879699.0606256-CDS-C-linearis_contig11:808600..808653Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 808601..808653 +
1622927436.627814-CDS-C-linearis_contig11:809295..8094281622927436.627814-CDS-C-linearis_contig11:809295..809428Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 809296..809428 +
1690879699.068486-CDS-C-linearis_contig11:809295..8094281690879699.068486-CDS-C-linearis_contig11:809295..809428Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 809296..809428 +
1622927436.6398408-CDS-C-linearis_contig11:810062..8101761622927436.6398408-CDS-C-linearis_contig11:810062..810176Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 810063..810176 +
1690879699.0785306-CDS-C-linearis_contig11:810062..8101761690879699.0785306-CDS-C-linearis_contig11:810062..810176Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 810063..810176 +
1622927436.6495924-CDS-C-linearis_contig11:810785..8109801622927436.6495924-CDS-C-linearis_contig11:810785..810980Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 810786..810980 +
1690879699.0868316-CDS-C-linearis_contig11:810785..8109801690879699.0868316-CDS-C-linearis_contig11:810785..810980Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 810786..810980 +
1622927436.6619906-CDS-C-linearis_contig11:811811..8119731622927436.6619906-CDS-C-linearis_contig11:811811..811973Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 811812..811973 +
1690879699.0958722-CDS-C-linearis_contig11:811811..8119731690879699.0958722-CDS-C-linearis_contig11:811811..811973Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 811812..811973 +
1622927436.6802342-CDS-C-linearis_contig11:812444..8125271622927436.6802342-CDS-C-linearis_contig11:812444..812527Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 812445..812527 +
1690879699.105645-CDS-C-linearis_contig11:812444..8125271690879699.105645-CDS-C-linearis_contig11:812444..812527Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 812445..812527 +
1622927436.7068632-CDS-C-linearis_contig11:813009..8132291622927436.7068632-CDS-C-linearis_contig11:813009..813229Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 813010..813229 +
1690879699.1157594-CDS-C-linearis_contig11:813009..8132291690879699.1157594-CDS-C-linearis_contig11:813009..813229Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 813010..813229 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1194.1prot_C-linearis_contig11.1194.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 807331..813229 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1194.1

>prot_C-linearis_contig11.1194.1 ID=prot_C-linearis_contig11.1194.1|Name=mRNA_C-linearis_contig11.1194.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=419bp
MWRSRALLWFLLALDVSAATQGDKNAEDEAAGAGCGCSAGLSRDLSGTSG
GTSSSAVDGTTTAEPAATAAARDETAGGDMVFVDAGSFRFGTDNPFIPPD
GEGPGRITHLPGYYIDRFMVTNERFGEFVGNTSYKTDSEKYGWSFVFLPM
LSERQQREIQQAVAGMEWWLPVEGAYWRRPEGPTTDVFGDGRGNHPATHV
SWNDAKAYCRWRGGRLPSEAEWERAAQGGGTVDVEAALEDGRVPRYPWGD
DLTPGGQHRANVWQGTFPTLNLAEDGFAYTSPVDAFPAQNSLGLRDAVGN
AWEWVEDWWTPDRSKYKRSNPRGPKRGTEKTKKGGSFLCHHTYCYRYRPA
ARTKSDIDSGTSNQGFRCAADADNSVGDGREPKVKRPNRGGQEKNGDADA
SAAFDGAAGAADVEIEEL*
back to top

mRNA from alignment at C-linearis_contig11:807291..813687+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1194.1 ID=mRNA_C-linearis_contig11.1194.1|Name=mRNA_C-linearis_contig11.1194.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6397bp|location=Sequence derived from alignment at C-linearis_contig11:807291..813687+ (Chordaria linearis ClinC8C monoicous)
CGGCGGTGGGTGCTCTGTGTTTGTGAAGGAGAGCTGCACCATGTGGCGAT CCCGGGCATTGCTATGGTTTCTGCTAGCGCTCGACGTTTCTGCCGCTACC CAAGGTAAACACTGTCTAGATTAGACGCATGATTTTCAGGTTTGCTTCAC CGAGACGGTTTTTGACCCATGGCCTGTCATCCTGCCCCCTGGGCACACAT TCCCCCCGGTGCTTGCTCGTATCTTGTTGCATGGTCCTTCAGATTCCGCG ATATTACATGCCCTTCAATAACACATAGCTCATGTATCTCAATGGTGAGG AGAGACACCCTTCCGACGGTTCTGCTGTTTGGTCAACAATAAAGCGTGCA AAGGGCCACCTCTGACCTTCTGGTCACGCACCAGACGGAACTGCCCAACT GCTGTTTAGCTTGCTGCTTCAAGCTTGAAGGTGTCTGCTTGAAGGTAATC ATCTAGGTTCACTCACTTGGAGGAGGTTTGGGCCCGATCTGCTGTCGCAC ACGACGGCGGAAGTAGTACATGCGCTGCTGCGCCGCACGACCACAGCAGT AGATCCTGCTGGTGGTTCTCTCAATAGCCCTTGCTCGTGTCTCTCCCACA AGGCGACAAAAATGCTGAAGACGAAGCAGCGGGCGCAGGCTGCGGTTGTT CTGCGGGACTCAGCAGGGACTTGTCGGGAACTAGCGGTGGCACTAGTTCC TCCGCAGTTGACGGCACAACCACCGCAGAGCCAGCGGCAACAGCAGCAGC GAGAGACGAAACGGCAGGAGGAGACATGGTCTTCGTGGATGCGGGGTCAT TTCGATTCGGGACAGACAACCCCTTCATTCCTCCGGTGTGTGTACACGCA CGGGGGTCATGGCTGCAGTGCGCTCGTTCAGGAGTGGTCCACAACACAAG AGCAGTCATGACTAGAGTGATGTCCTTCACGGGTCGTACTTGTAGATGTT TTCAGTCTACAGAACCAAGACGTGCATGAGTAAGCGTCCACCGCAAATTC CCTCAGTTCGTGCACCCTCGTCGTTGCCTCGTTCCGTGCATCTTTGGGAG TGCACTTTAAACTGTGTGTTTCCGATGGATGTCTAGTCTTAGTTGTATTT GTCGGTTTCAATGTTTGCACCAGTCCCTGTCGGCAGCGCATGCACGATGC GATCGGTATGCGTTTTACCCGTCTCGCGCGCTCCCGCGTGATTTTGTGTT CCCAATAGATGCACATGACCAACCTCTATGCCTGATGACGAAGCTGCTGA TGATGCGGATGGACACCCTGCGGAAACCTTCTTTTTTTTTTTGGGTGGTT TTTCGTGCAGGACGGGGAAGGCCCTGGGCGCATCACCCACCTCCCCGGCT ACTACATCGATAGGTGCGACGCTCTTGGTTTATTTTAGGCTGGGTTCCCC GTGTTGGGACGAAAATCATACCGATTCGTTTTTGGTTTGTTTTGTCAAGT GGCTTTTTTGTTAAATGTGTGTGCGTCTTGGCGCGTTAGGCTAACGTAGT GGAGAAGTACGCCGCAGACGGCATTGGATCTATTCCTTTTTTTTCTTTGA CGTTCGACCCCAGCTCCGAATCATGGCTCAGCGCCATGCACGATACAAAG GGTGCATTCCACTGGGACATGAGACCAGACAGCTTGATCGCAGAATTGAA CACCCGGGGTTAGAAGCAGGGTCTACACCTTGCTATTGCACAACGACGGT GCAGGCCGAGGTGTTCCTTTCTACGCTTTTCTCTCTAGCTTGCCGGGTCC GGGAGAAGGCGTGCGTTCCGCATAACTTGAGGACAGCTGTACGTTGACAC GCAGGTATAAACTAACTTTCCTATGTATGAGACCAATGGTGTATTCCACT GGGGAAAAAAATTGGTTGTAGGTTGGCCGTAGTCTCCTGACGTTCAGTTG AACAAAAATATGTCGAACTGGCAAGCTCCCAGGCGCCGCTTAGCTCTGCA TGCAAGTGCCCACTCGTAGCCGTATTCTTGTGACTTTCACTTGACGCCTG CTCAGGTTCATGGTGACGAACGAGAGATTCGGTGAGTTTGTGGGCAACAC CTCCTACAAGACGGACAGCGAGAAGTACGGGTGGTCCTTCGTCTTCCTCC CGATGCTGTCCGAGCGACAGCAGCGCGAGATACAGCAGGTATGCGCCGCG TTTTGTTTAGTCCAGGTGAAGAGCAGGGAGGAAAATTACAGTCGCCACTA GAAATGGACTGTTAGATATGGTAAAACACGGGTGCACAACTGGTGGAAGA TGGAGTGGTATCAGTGGACAGGGACAGGGAACGGAAAGGCTGGAGGGGGA AGCCCCGATGAGACGGAGTGCCTGAGTTGGCGAGATTTTGTGGGGTGATT TCATGGCGGTGGGCAAAGAGCACGCCCGTGATGGGCGCGTGTTGGTTAGC TGGCTTGCACATCAAAGTATGTGCGTAGATGTAGTCGTCGCTGGTGATTT CGGAGTGGCAGGTACGGTGAGCGTTGCTGCTGCGATGTGTCCGACCACCG CATTGCTAGGATGGGATGCCGTTGTTGTGCACCATTATCCCCTACGGTGC GACATGCTTAGCGTTGGTGTCGCGGGAAGCAGCTCGGGGGACCCACTGTG TACCACGCTTCTGCGTTGAGCTTTCGAGCGAATTCGCCAGTCTACATCGT CTCCTCCTCCAAGAAGCCATCGAGAAGCGTACGCCGATATCCCAGGATCG CCAACCTTCGCACATGAATGATGACGTGTTTTTTTGCATAACCCATTGGG GTTGACTCGCTCGTCGACGCAGGCCGTAGCGGGCATGGAGTGGTGGCTGC CCGTGGAGGGGGCGTACTGGCGGCGACCGGAGGGTCCTACGACCGACGTG TTTGGAGACGGCAGGGGAAATCATCCAGCAACTCACGTGAGCGCCAGGAA GAGCGCATAGTTGTAGACTACCCGAGAGGGACGATTGGAGAATAGATCGA ACCGAACACGACGGGGGTATCGAAAAGCCTCCTGGTAGTTCTGAAAGAAT TGCCGAGAGGAGGCGAGTCGAGTGGGGGAGCTACATGTTGTTTACACAAC TTTCGATTCTTGACTCCCTTGAATGTGTTTTTTGTCGTGGTTTTGGTCTC CACCCGTCTCTCGTCTCCACCACGCCCGCGAGCGAGCCATGACATCGCAA GCAGCAGGAGGTGTTTCCCGCAACCAAAATAAAAACGGAAAAAACATTTG AAGCGAAAGACCGCGCACCCAAGAACCGAAACACGAGACAAAAGACCCCC AGCCTAGCGTGTTACCGCGTACCCCCCTCCACGACCTTCGGCAAGCTACT CCACTCCTTTCAGGGATGGAGTCTTGGTGGACAGGGCCAATCATTGTACC CGTAGGGCTTTTGGATGGGTTCAGTTGGTAGGTTCGTTTCCAGAAGGCGA ACAACAACCTGTGTTGGTCGTCTGTAGGCAAAACGAGAGAGGAAATCGCC TCTCCCTTCACAAAACACGACCGATTGCTCACCTTACCCGAACAGGTATC GTGGAACGACGCCAAAGCGTACTGCCGATGGAGGGGCGGGCGGCTGCCCA GCGAGGCCGAGTGGGAGCGTGCGGCCCAGGGAGGGGGCACCGTGGATGTT GAAGCAGCACTAGAGGATGGGAGAGTGCCGCGATACCCGTGGGGGGACGA TCTCACCCCGGGGGGGCAACACCGGGCGAACGTGTGGCAGGTGCGGGCAG TTGATGTTGTTGGTGCTGCTAGTGTCGTTGCTGTCATAGTTGGAGGGCGA GTTTCGAGGGGTAGAGCACCACCTGGGGACAGTCGCGGCAGTGCGCTGGC GCTGGTGGGTGTACTCGACGGCGAGGAGCTTTTCGAAGCATGCGGTGGCC CTACTGAAATCGGTGTTGGGCTTTGAGGGACGCCTTCATGTTCTGGCTAG CGCCGCGTGTGGCACCGGGGCGTCCGGAATTCCGACGTCAGCCGGCTCGT TGAGATTTCTTCTCCGTTTTTGTCGCTTTCTTAACCCACGCTACCGGCGC CCTCCACTGCTGTGGCGCCGCCCGGTTTTCTTTTTCCCTCGAGCGCGCGG CTCTGACCGAATCGGGTAGCTCGCACCACCCAACGAGCAGCTTGGGTTTG TGCTGCTGCTATTGAAACGAGCAAGGAAAGAAGTACGTATCTGGCGTGAG TCTCGCTGAAGGATCGTCTAGCGGTACGACCTGTGACTCGGGACCCAGTC AGTCCCCGCGCATGTTCCGCACCCTAGATGCAGCCGAGGTTGCTCTTGTG CCCCATACCACATCGCACGAAGCGGCACTCACTTTTTGGTGTAGTGGTTC TGAAAGAACCAACGGGTTCCCGTGGCAGGGTTGGTGTCTGATTTCCGGAA CAGGAAACGCTGAGGCCTGTCAAAAGTTCTAGCTTGCCCTACATAGCCCA ACGAGGAGATACTTTCTAGTGCAAAAGCAGGTAAGAGAGTGTAGCCTTCC CTACCCCGCGCCGCCGCCGCCACTGCCACCCCCGCCTCCACCTTGCTGCG CCCCCTCTTCTTTTCTCGTAGGGCACGTTCCCGACTCTAAACTTGGCGGA GGATGGTTTCGCGTACACGTCGCCGGTGGACGCTTTTCCCGCCCAGAACT CCCTAGGGCTGAGGGATGCGGTGGGCAACGCTTGGGAGTGGGTCGAGGAC TGGTGGACCCCAGATCGCTCAAAGTACAAGCGGGTACGTAACCTTTTCGT TCCTTTTGTCTTTTGTCGCCTTAGTTTTCCTGAGCTGTCTACCCGCTAGC CCTCGCTTGCCGCCCCCGGCTACAACGGTCCAAGACCAGCCTTCCGTGAA GTGTCTGGCTTTCTTTCGTTTCTCGTTGCGTGTTTTTGTTTGTTTGTTTG CTTGCTTGTTTGCTTGTTCATCACCTTGTGTTTCTTGTCCGAAGTTGTGC CGTGACCACCACCCTCTTCTTGCGTGCCCGGATGCGGTACTGCAGGGTGC TTGAGGTTATGTGTGCGACTACTCTGTTGCAGGACTTGTTTATGCTGCCG CAAGTTTGTCGCGTCGGGTACATACATAACAAGCAGGCCTGCAGACGGGA CTTGAAGGAGGTTTTGCTCCCTGCACAGAGTGCCGAGACTTCGCCCTTCA CTCCTTTACCCACCGACCGCCCTTTTATGTCTTGGTTGTTTGTTGTGCGG GCAGAGCAATCCGCGAGGGCCGAAACGGGGCACGGAGAAGACAAAAAAGG GGGGGTCTTTCCTTTGCCACCACACCTACTGCTACCGGTGCGAAAAGGGT GTCCTTTTGGGCTCGTTTTTGTCAGATGAAAGGCTCCTTCAGGGAAGACC TGTAGCCCACACGTACATACCTTTCCGTGACACGCGTCAACCCTCGAAGC ATTCACGCAACCCCCGAGGGTCCCGCCGATGGTACCCCTGGCTGTGTGCC ACCTGACTTGCGGTGTTGCACAGAACGCTTAATTTGTAACGGCGGCAGAG CGATGACTCGAGCCTGTCGCCTCTTCTTGATTCTACAAGAAGCTGCGGCG TGTGCTGCTCCTTCTCAGTTAGCCTTCCGGTTTCCTAATGCTTGCGCTAC AGCAGCACACCTTGGTTTCGTTTTTTCTGTCGCACGCTGATTCTACACGC ACGCCTCGTCCCCTCCCCCGGGAACTACTGTCTGTTTCTGCAGAAAGACC CCCTGGATGTTGTGCTGTTCGCTCAAGGCATGTCTTGCCCCCCCCCCCCA CCTTCCTGTCAATGTGCAGGTATCGGCCGGCCGCGCGCACGAAGTCGGAC ATCGACAGCGGCACCTCCAACCAGGGGTTTCGGTGCGCCGCCGACGCCGA TAACAGCGTCGGGGACGGCAGGGAGCCTAAGGTCAAAAGGCCAAATCGCG GGGGGCAAGAAAAAAACGGCGACGCGGATGCTAGCGCTGCTTTTGATGGG GCCGCTGGCGCTGCTGATGTCGAGATCGAGGAGCTGTGATTGTTAGCCCT CCTGTATTCTGTATCTGTCCGTTTTTTTTGTGTGGAGCCTCTTTGTCGGG GGTTCTTGGTGGCCGTTGTTTCGATCGCGGTGATCGTCGTGCTGGCTGGC GTCGCAGCACCAGCGGATGAGGATTGTCGGGTTAGCAACACGCCTGTAGG CTGCGATTGTTTCGTGGTTCTACAAGCTGTGGATGTTGTGACATGCGGCT GAGGCTTTGTTTACACGATATTTCAACCGATTTAGATACAGGCATACATT CTGAGGAACAAGTTGTCGTACTCCTTGTATTGGGAGCCTATTTTCGGTGG ATGCCGTGCCCCCTCCTCTTTTCAGCAGAGCCCCCCCCCCAATCTGCCCC AAGATGGCCAGTTTTTAAGAGAGCCAGTTTTCTTCTATCGAAGGTACCGG CATCCCAAGTCGCAATCTCGATACGGCGCAACGCTAATAAAACCGGC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig11:807291..813687+

>mRNA_C-linearis_contig11.1194.1 ID=mRNA_C-linearis_contig11.1194.1|Name=mRNA_C-linearis_contig11.1194.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2514bp|location=Sequence derived from alignment at C-linearis_contig11:807291..813687+ (Chordaria linearis ClinC8C monoicous)
ATGTGGCGATCCCGGGCATTGCTATGGTTTCTGCTAGCGCTCGACGTTTC
TGCCGCTACCCAAGATGTGGCGATCCCGGGCATTGCTATGGTTTCTGCTA
GCGCTCGACGTTTCTGCCGCTACCCAAGGCGACAAAAATGCTGAAGACGA
AGCAGCGGGCGCAGGCTGCGGTTGTTCTGCGGGACTCAGCAGGGACTTGT
CGGGAACTAGCGGTGGCACTAGTTCCTCCGCAGTTGACGGCACAACCACC
GCAGAGCCAGCGGCAACAGCAGCAGCGAGAGACGAAACGGCAGGAGGAGA
CATGGTCTTCGTGGATGCGGGGTCATTTCGATTCGGGACAGACAACCCCT
TCATTCCTCCGGCGACAAAAATGCTGAAGACGAAGCAGCGGGCGCAGGCT
GCGGTTGTTCTGCGGGACTCAGCAGGGACTTGTCGGGAACTAGCGGTGGC
ACTAGTTCCTCCGCAGTTGACGGCACAACCACCGCAGAGCCAGCGGCAAC
AGCAGCAGCGAGAGACGAAACGGCAGGAGGAGACATGGTCTTCGTGGATG
CGGGGTCATTTCGATTCGGGACAGACAACCCCTTCATTCCTCCGGACGGG
GAAGGCCCTGGGCGCATCACCCACCTCCCCGGCTACTACATCGATAGGAC
GGGGAAGGCCCTGGGCGCATCACCCACCTCCCCGGCTACTACATCGATAG
GTTCATGGTGACGAACGAGAGATTCGGTGAGTTTGTGGGCAACACCTCCT
ACAAGACGGACAGCGAGAAGTACGGGTGGTCCTTCGTCTTCCTCCCGATG
CTGTCCGAGCGACAGCAGCGCGAGATACAGCAGGTTCATGGTGACGAACG
AGAGATTCGGTGAGTTTGTGGGCAACACCTCCTACAAGACGGACAGCGAG
AAGTACGGGTGGTCCTTCGTCTTCCTCCCGATGCTGTCCGAGCGACAGCA
GCGCGAGATACAGCAGGCCGTAGCGGGCATGGAGTGGTGGCTGCCCGTGG
AGGGGGCGTACTGGCGGCGACCGGAGGGTCCTACGACCGACGTGTTTGGA
GACGGCAGGGGAAATCATCCAGCAACTCACGCCGTAGCGGGCATGGAGTG
GTGGCTGCCCGTGGAGGGGGCGTACTGGCGGCGACCGGAGGGTCCTACGA
CCGACGTGTTTGGAGACGGCAGGGGAAATCATCCAGCAACTCACGTATCG
TGGAACGACGCCAAAGCGTACTGCCGATGGAGGGGCGGGCGGCTGCCCAG
CGAGGCCGAGTGGGAGCGTGCGGCCCAGGGAGGGGGCACCGTGGATGTTG
AAGCAGCACTAGAGGATGGGAGAGTGCCGCGATACCCGTGGGGGGACGAT
CTCACCCCGGGGGGGCAACACCGGGCGAACGTGTGGCAGGTATCGTGGAA
CGACGCCAAAGCGTACTGCCGATGGAGGGGCGGGCGGCTGCCCAGCGAGG
CCGAGTGGGAGCGTGCGGCCCAGGGAGGGGGCACCGTGGATGTTGAAGCA
GCACTAGAGGATGGGAGAGTGCCGCGATACCCGTGGGGGGACGATCTCAC
CCCGGGGGGGCAACACCGGGCGAACGTGTGGCAGGGCACGTTCCCGACTC
TAAACTTGGCGGAGGATGGTTTCGCGTACACGTCGCCGGTGGACGCTTTT
CCCGCCCAGAACTCCCTAGGGCTGAGGGATGCGGTGGGCAACGCTTGGGA
GTGGGTCGAGGACTGGTGGACCCCAGATCGCTCAAAGTACAAGCGGGGCA
CGTTCCCGACTCTAAACTTGGCGGAGGATGGTTTCGCGTACACGTCGCCG
GTGGACGCTTTTCCCGCCCAGAACTCCCTAGGGCTGAGGGATGCGGTGGG
CAACGCTTGGGAGTGGGTCGAGGACTGGTGGACCCCAGATCGCTCAAAGT
ACAAGCGGAGCAATCCGCGAGGGCCGAAACGGGGCACGGAGAAGACAAAA
AAGGGGGGGTCTTTCCTTTGCCACCACACCTACTGCTACCGAGCAATCCG
CGAGGGCCGAAACGGGGCACGGAGAAGACAAAAAAGGGGGGGTCTTTCCT
TTGCCACCACACCTACTGCTACCGGTATCGGCCGGCCGCGCGCACGAAGT
CGGACATCGACAGCGGCACCTCCAACCAGGGGTTTCGGTGCGCCGCCGAC
GCCGATAACAGCGTCGGGGACGGCAGGGAGCCTAAGGTCAAAAGGCCAAA
TCGCGGGGGGCAAGAAAAAAACGGCGACGCGGATGCTAGCGCTGCTTTTG
ATGGGGCCGCTGGCGCTGCTGATGTCGAGATCGAGGAGCTGTGAGTATCG
GCCGGCCGCGCGCACGAAGTCGGACATCGACAGCGGCACCTCCAACCAGG
GGTTTCGGTGCGCCGCCGACGCCGATAACAGCGTCGGGGACGGCAGGGAG
CCTAAGGTCAAAAGGCCAAATCGCGGGGGGCAAGAAAAAAACGGCGACGC
GGATGCTAGCGCTGCTTTTGATGGGGCCGCTGGCGCTGCTGATGTCGAGA
TCGAGGAGCTGTGA
back to top