mRNA_C-linearis_contig11.1164.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1164.1
Unique NamemRNA_C-linearis_contig11.1164.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: D8LKM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM1_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.580e-39
Identity = 113/155 (72.90%), Postives = 122/155 (78.71%), Query Frame = 1 
Query:   97 MSEDAAERRKRLKALKDKATNKSIKFRNYRPQDAAIKQQALDSK-------GKGGGEASSGATASSVNARKVD----EEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTE 528
            MSE  AERR RLKALK+KA NKSIKFRNYRPQDAAI+QQALDS        G G G A+ G  A+S + + +       XXXXXXXXXXXXXA   SLIQQELK+QKETQDE ELNIAPKKANWDLKRDVEKKLEKL+RRTQRAIVEIIRERM E
Sbjct:    1 MSESGAERRSRLKALKEKA-NKSIKFRNYRPQDAAIRQQALDSSKAGEPTSGSGSGGANKGEGAASPSGKSMGGXXXXXXXXXXXXXXXXXXAPESSLIQQELKKQKETQDEGELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAE 154
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A7S2W1E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1E1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.280e-14
Identity = 64/147 (43.54%), Postives = 85/147 (57.82%), Query Frame = 1 
Query:  103 EDAAERRKRLKALKDKATNKSIKFRNYRPQDAAIKQQALDSK------GKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEE-LNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERM 522
            E A  RRKRL+ +     +K +KFRNYRPQD  +K +A+ +        +   + +    ASSV +RK                   A ++IQQELK     Q  EE LNIAP+K NWDLKRDV KK+EKLN+RTQ AIV++I+ER+
Sbjct:    8 ESAEARRKRLRTMAAGGASK-LKFRNYRPQDTDLKTKAVAAALPKPILDEVQAQPAPDKDASSVQSRK-------------------ATAVIQQELKEHVAEQGGEEVLNIAPRKPNWDLKRDVAKKMEKLNKRTQLAIVDLIKERI 134
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A8H7VG57_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VG57_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 3.710e-12
Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 1 
Query:   97 MSEDAAERRKRLKALKDKATNK---SIKFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMT 525
            M ++A  R++RL AL+ + T     S+KFR+Y P D  +KQQ                    V    + E              A A          ++E ++ + +N+ PKK NWDLKRDVEKKLEKL+RRTQRAI+EIIR+R++
Sbjct:    1 MEKEAQNRKERLAALRKRKTESGSDSLKFRSYTPTDENLKQQTQI-----------------VTPDDIGETVESQTKDFTKEALAAAA---------EQEKEEVDLINLQPKKPNWDLKRDVEKKLEKLDRRTQRAILEIIRQRLS 120
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A835ZFC6_9STRA (Cwf18 pre-mRNA splicing factor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.390e-12
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 1 
Query:  352 SLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTE 528
            S+I+QEL++ K+ QDE  LNIAP+K +WDLKRD   KLEKLNRRTQRAIV+I+RE+M E
Sbjct:   86 SIIKQELRKVKDGQDEGTLNIAPRKPDWDLKRDAAPKLEKLNRRTQRAIVQILREKMAE 144
[Close]
BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A1X2IBU1_9FUNG (mRNA splicing factor n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBU1_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 6.490e-12
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 1 
Query:   97 MSEDAAERRKRLKALK-------------DKATNKSIKFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMT 525
            M E+A  R+ RL+A++             D  + K +KFR+Y P D  +KQ                 + ++ N  K+  E             A            +KE +D +  N+APKKANWDL+RDVEKKLEKL+RRTQ+AI+E IR+R+T
Sbjct:    1 MEEEARRRKDRLEAIRKRKQASAPSNTRVDDESIKDLKFRSYTPTDENLKQHV---------------SIATPNHIKITAETETKEIPTQTLAEAA-----------EKEKEDVDLFNLAPKKANWDLRRDVEKKLEKLDRRTQKAILETIRQRLT 130
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: UPI0014430E02 (coiled-coil domain-containing protein 12 n=2 Tax=Halictidae TaxID=77572 RepID=UPI0014430E02)

HSP 1 Score: 73.9 bits (180), Expect = 1.090e-11
Identity = 56/160 (35.00%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:   94 TMSEDAAERRKRLKALK----DKATNKSI--------KFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTEVCH 537
            T+ E+A +R++RL+ALK    D   NK+         KFR+Y+PQD ++K++ L+    G  E       S+ N + V EE                                    N+AP+K +WDLKRDV KKLEKL RRTQ+AI E+IR+R+ +  H
Sbjct:    8 TLEEEALKRKERLQALKRKTEDSKENKNDVASKLPKPKFRSYKPQDDSLKEKVLEDAKPGNVEVEVQDQLSAANTKVVIEELDIS--------------------------------NLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRDRLKQGQH 135
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A7M7R953_APIME (coiled-coil domain-containing protein 12 n=14 Tax=Apoidea TaxID=34735 RepID=A0A7M7R953_APIME)

HSP 1 Score: 73.6 bits (179), Expect = 1.490e-11
Identity = 57/160 (35.62%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:   94 TMSEDAAERRKRLKALKDKAT----NKSI--------KFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTEVCH 537
            ++ E+A +R++RL+ALK K      NKS         KFR+Y+PQD ++K + L+    G  E       S+ N + V EE                                    N+AP+K +WDLKRDV KKLEKL RRTQ+AI E+IRER+ +  H
Sbjct:    8 SLEEEALKRKERLQALKKKTEENKENKSESASKLPKPKFRSYKPQDESLKDKVLEDAKPGNVEEEVKDQLSAANTKVVIEELDIS--------------------------------NLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRERLKQGQH 135
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A6J0BK06_NEOLC (coiled-coil domain-containing protein 12 n=3 Tax=Diprioninae TaxID=410274 RepID=A0A6J0BK06_NEOLC)

HSP 1 Score: 73.6 bits (179), Expect = 1.850e-11
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 1 
Query:   94 TMSEDAAERRKRLKALKDKATNKSI-------------KFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTE 528
            ++ ++A +R++RL+ALK K T+++              KFR+Y+PQD ++++Q LD    G  E+      S+ N++ V EE                                    ++AP+K +WDLKRDV KKLEKL RRTQ+AI E+IRER+ +
Sbjct:    8 SLEDEALKRKERLQALKRKITDENKEQGKSEGSTLPKPKFRSYKPQDDSLREQVLDEAKPGDVESEVKDQLSAANSKVVIEELDIS--------------------------------SLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRERLKQ 133
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: A0A0K8TK94_TABBR (Putative cwf18 pre-mrna splicing factor (Fragment) n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TK94_TABBR)

HSP 1 Score: 72.0 bits (175), Expect = 1.860e-11
Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 1 
Query:   97 MSEDAAERRKRLKALKDKATNKSIKFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERM 522
            + E++ +R++RLK L+ KA N  I FR+Y+PQD  I +Q L++K                  R  DE                 P +I+          D +  N+AP+K +WDLKRDV KKLEKL RRTQ+ I E+IRER+
Sbjct:    3 LEEESLKRKERLKNLRKKAENTPI-FRSYKPQDKTINEQILENK---------------TVVRLEDE-------VKDQLEILKTPIVIE----------DIDIANLAPRKPDWDLKRDVAKKLEKLERRTQKTIAELIRERL 111
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BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Match: UPI001C9A69AC (coiled-coil domain-containing protein 12 n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A69AC)

HSP 1 Score: 73.2 bits (178), Expect = 2.020e-11
Identity = 57/160 (35.62%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:   94 TMSEDAAERRKRLKALK----DKATNKSI--------KFRNYRPQDAAIKQQALDSKGKGGGEASSGATASSVNARKVDEEXXXXXXXXXXXXXATAPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTEVCH 537
            ++ E+A +R++RL+ALK    D   NK+         KFR+Y+PQD ++K + LD    G  EA      S+   + V EE                                    N+AP+K +WDLKRDV KKLEKL RRTQ+AI E+IRER+ +  H
Sbjct:    8 SLEEEALKRKERLQALKRKTEDNKENKAEGGIKLPKPKFRSYKPQDESLKGKVLDDAKPGNVEAEVHDQLSAATTKVVIEELDIS--------------------------------NLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRERLKQGQH 135
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM1_ECTSI1.580e-3972.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W1E1_9STRA1.280e-1443.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8H7VG57_9FUNG3.710e-1236.99Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A835ZFC6_9STRA5.390e-1267.80Cwf18 pre-mRNA splicing factor-domain-containing p... [more]
A0A1X2IBU1_9FUNG6.490e-1235.26mRNA splicing factor n=1 Tax=Absidia repens TaxID=... [more]
UPI0014430E021.090e-1135.00coiled-coil domain-containing protein 12 n=2 Tax=H... [more]
A0A7M7R953_APIME1.490e-1135.63coiled-coil domain-containing protein 12 n=14 Tax=... [more]
A0A6J0BK06_NEOLC1.850e-1133.54coiled-coil domain-containing protein 12 n=3 Tax=D... [more]
A0A0K8TK94_TABBR1.860e-1137.32Putative cwf18 pre-mrna splicing factor (Fragment)... [more]
UPI001C9A69AC2.020e-1135.63coiled-coil domain-containing protein 12 n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:399160..403167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.8
Seed ortholog evalue1.4e-35
Seed eggNOG ortholog2880.D8LKM1
Preferred nameCCDC12
KEGG koko:K12871
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0070035,GO:0071014,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.RNA splicing
EggNOG OGsKOG3407@1,KOG3407@2759
Ec32 ortholog descriptionmRNA splicing factor, Cwf18
Ec32 orthologEc-16_003480.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons3
Model size2647
Cds size771
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1164.1prot_C-linearis_contig11.1164.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 399256..401387 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927431.628053-UTR-C-linearis_contig11:399159..3992551622927431.628053-UTR-C-linearis_contig11:399159..399255Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 399160..399255 +
1690879695.9819257-UTR-C-linearis_contig11:399159..3992551690879695.9819257-UTR-C-linearis_contig11:399159..399255Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 399160..399255 +
1622927431.7207785-UTR-C-linearis_contig11:401387..4031671622927431.7207785-UTR-C-linearis_contig11:401387..403167Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 401388..403167 +
1690879696.0291562-UTR-C-linearis_contig11:401387..4031671690879696.0291562-UTR-C-linearis_contig11:401387..403167Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 401388..403167 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927431.6370883-CDS-C-linearis_contig11:399255..3994481622927431.6370883-CDS-C-linearis_contig11:399255..399448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 399256..399448 +
1690879695.9941185-CDS-C-linearis_contig11:399255..3994481690879695.9941185-CDS-C-linearis_contig11:399255..399448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 399256..399448 +
1622927431.6458826-CDS-C-linearis_contig11:400290..4003851622927431.6458826-CDS-C-linearis_contig11:400290..400385Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 400291..400385 +
1690879696.0039136-CDS-C-linearis_contig11:400290..4003851690879696.0039136-CDS-C-linearis_contig11:400290..400385Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 400291..400385 +
1622927431.6556017-CDS-C-linearis_contig11:400904..4013871622927431.6556017-CDS-C-linearis_contig11:400904..401387Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 400905..401387 +
1690879696.0149372-CDS-C-linearis_contig11:400904..4013871690879696.0149372-CDS-C-linearis_contig11:400904..401387Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 400905..401387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1164.1

>prot_C-linearis_contig11.1164.1 ID=prot_C-linearis_contig11.1164.1|Name=mRNA_C-linearis_contig11.1164.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=257bp
MSEDAAERRKRLKALKDKATNKSIKFRNYRPQDAAIKQQALDSKGKGGGE
ASSGATASSVNARKVDEEEEEGEGGGEGKRKATAPSLIQQELKRQKETQD
EEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMTEVCHAPP
LLFSRACFFLSRRFASAEIFLAHHLQAWSCLVFLSTVQAFFVQCFVWRAF
VYAQIPRVLGGCIASLCLCLVSLPLSPSLSSRRPCVRDEWLKHIYSGTAC
YWYAAC*
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mRNA from alignment at C-linearis_contig11:399160..403167+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1164.1 ID=mRNA_C-linearis_contig11.1164.1|Name=mRNA_C-linearis_contig11.1164.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4008bp|location=Sequence derived from alignment at C-linearis_contig11:399160..403167+ (Chordaria linearis ClinC8C monoicous)
TTGCATTCTGGGTGCCCCCGACACCTTGCTGTTCGAGGAGGCAATTGCCA
CCCCCAGAGCTGAAGGTGCGATTCGTACCCAAGATCATAACACACCATGA
GCGAGGATGCAGCTGAGAGGAGGAAGCGGTTAAAAGCTCTCAAAGACAAG
GCGACCAACAAGAGCATAAAGTTCAGGAACTACCGCCCACAAGACGCGGC
GATCAAGCAGCAGGCTCTCGACAGCAAGGGGAAGGGGGGCGGGGAAGCAA
GTAGTGGCGCCACTGCGTCATCGGTCAACGCAAGAAAAGGTTCGTGCTGG
CTTTTCGATGTGGGTACGTGGTCAGCGCTTCACGTGGGTTGACTGATTTG
ATGTTGGTGTATGTTTTGCCAGCTGAGATTCCTCGCCGCACGCGAGTACC
TCTGCGGTAGGCCTCGTGTGGGCACAACAAGGCAGCAGTGATGTGATGTA
GCTGATCGTAGAGGAAACCGCAACAAAGCTGCGTGTCCATGCTTCTGTAC
GGCTTCGCTTTCCTCGTAAACGACAAGAAAGCAGTCAGATGTCAAGCACT
GCTGCGTTTGCCCGTTGTGGTGGTGAATATCACCCCCCCTTCAACTTTTA
ACTACCGTCCGCACCACCCGACAGTTGTAGTTGCTCCCTGCTCCGTGTCT
TGCTCTAGGATGTGTGACAATCACGGCTGCTAGTCGCAGTCACAGAGAGG
AGGGGATGCTAGCACCTGTCGAGCTTTAAAAAAACGTCATTGGCAAGGCG
TTCCTCACTTTCGACATCTTGCGAACACTGAGGATCGCTGGACTAAACAA
ACGCAGTGGTAGACATTGCGTATCTCAGTCTCTAACACCACTCCGAAGCC
TATAATAGCACAAGCTCTACAAATCAAGCACCAGGTCAAGAACCCGCTCT
TGCGCTTTTTTTTTCGTGTGCTTGGTCCGCCTTTCTGGCGCAAGTGCGCA
TCTCTTTGAGTTTGCTCCAGCCTCTTCCTGCGGTGCTTTCCGTATCTTAT
ATCTGTATCTTACAACGCGAGAAGGGCTAGCATCAGTACACCCCCTCTTT
CATGATCCAGTGGTGCAATCAAAACCGCCATCTGTTCGTTCGAACGTTAC
ATACAACCGGCACCCGCCGCAGGCCGAACAGTCGATGAAGAGGAGGAGGA
GGGGGAGGGGGGCGGGGAGGGGAAGAGAAAGGCAACGGCGCCAAGCTTGA
TCCAGCAAGAGCTCAAGCGGCAAAAGGTGCGGTGCTGGTTACGTTTGTAG
CATAAACGGTACGTAAAACACCACCCCGGAACGTGGGACTGCGGAATGTC
CAGATGCTTAGTGTGCTCTGGTATGTTGCACTTCTGTAGGCTTGGACGCT
TGATGTAGATGTTCGACGAGGCCATCAGGAATACCCGATGGCGGAAGCTT
TGAGTTTTGGTTGCGACGCCCCCCTCGAGGATACTCCCGGGGTGCCCCAA
CGATATCTGTATTTGTATGTCCATGCCGTTCAAGGAGTGAGAGTATTTTT
GTGCTCTATAATAAAGCAAGAGGCAAGGCACGTGCCCAAGTGTGTGTCAT
GGGCGAAGGGTAATCTCCGTCAGTCAAGTCCATCCGAAGGCACGAAAACA
ACCAGACCGACAACAAGAAACAAGAAAAAAACCACGCTGTCCGTAGCTAG
AAAATAGAGAGCCGCGGTTTCTCTCTTGGTCGTTTTGTTTTGCGTGCATG
TGGACGGTGCGGTTGACCTGTTCCTTCCCGTTTGCGGCTCGACAGGAAAC
ACAAGACGAGGAGGAGCTAAACATCGCCCCCAAGAAGGCCAACTGGGACC
TCAAGAGAGACGTGGAGAAGAAGCTGGAGAAGCTAAACCGGAGGACACAG
CGCGCGATCGTGGAGATCATCCGCGAACGCATGACCGAGGTATGCCATGC
CCCCCCGCTGCTCTTCTCGCGTGCATGCTTTTTTTTGTCGCGGCGCTTTG
CTTCGGCAGAGATCTTTCTTGCGCACCATCTCCAAGCATGGTCTTGTCTT
GTTTTTCTATCTACCGTTCAGGCTTTCTTTGTGCAGTGTTTTGTTTGGCG
TGCGTTTGTTTATGCACAAATACCGCGTGTGCTGGGTGGCTGCATAGCAT
CCCTCTGTCTCTGTCTTGTCTCTCTCCCTCTCTCTCCCTCGCTTTCGTCT
CGTCGACCATGCGTGAGGGACGAATGGCTCAAGCACATTTATTCGGGGAC
GGCCTGCTATTGGTATGCAGCGTGCTGAAGTTTTCACGAAGTTTTGTCTC
CGGAAAAGCAAAACCGGTGGTGGGACATCTCGCCTGCGAGACATTCTTTG
GGTTGTCCATTTTTTATGATGGCGGGTTTGCAGCTTCGTACGAATCCGGT
GCAGTAGCACTGCGGATGTACGATGGCACCGCGGTCTGTGCGCGGATTGT
TGTGAGTTTTCTTGCCACCTTGCGTCTTTGTTTGCCAAACAGGAGGACCG
CCTTCGCTACTGTAGCGAGCACCTACAAAGGTGCTTGCTGCTGTGTTACT
TCGATCTACGCGGCCGACCGGCCCGTACTCTCTGCTCCGCGGCCATCCCA
GACATTCTCTTCGTCCACGAAGATACTACAGTAGATGTTTTGTTTTCAGC
GGCGTCGTTTTCGCATCCTCCCAATCAACATCCTTGTCCTATCGAAGCCC
TGTCTATTCGTGACGCACGGCACCCTAAACATCCATGCCACTCGCTGTGT
TTTTTTGTCCGACAGGAGGCTGCCAACGCTAGCAGTAGCGAGGAGGAGGG
CAGCGGGAGCAGCAGCAGTGGGGAGGAAGGGAGAGGTAGCGGTAGCAGTT
CTGAAGATGAGGAGTAGAGTGGGTTTCCGTGACAGCAGTGGAGTGGAATG
TGTTTTCCAGCACGACCACCACCACCACCACCACCACCACCACTACCACT
ACCACTACCAATGGGGAGAAGGAAGTAGAGGGGCAGTTCCATGACGGCGA
GTAGAGGTTGCTTTATCGCTTGCGTTTTTTTTTTACGGGGCGATGGGGCC
CGTAGAAGTATCACGGCTATGCTTCGTGATGCTTTCTGGTCTCGCTTATG
AGTAGCGTAGTTGTGTTTGCTCTTATTAAGTTAGCAGCGTGCTTCTACTA
TTGCGCCCGTTGGTGCCGGCGGGGTGCGGGAGATCGTACATCTTACCTGT
TTTTTTACAGGCGAAGAAACACTTACCTTTTGGACAGAGAGTGTTACGGG
CTACTGCTGCTCTAATTCAGTAGCCGTTGCATCGGCGTTGTAGTCGAGCT
TGCGATCAGTCGTTTTCATGTTTCCAGCTTTGCAGCGACTGAGGTTTTCT
AGGCAGCGACGGTGCATATTGACGGAAAAATCTCGGCCCAGCTTTTGGCG
CAAGGCTCGTGGCTCCGCTTGCCCGATCCTGTGCCTGGAGAGTGGTAAAT
ATTAGTCCCTACTTTGGTAGGTGGTAACTTGCATCGGGTGAAACTACCTG
AACGCTTTATTGAGATTGCGGGCTTTGATGGCGTATTGCTGCCGTATCCA
GGATGGCTATGATGGGTGTACCTCTCTGGCAACGCTATGCTCTCGGTGCT
GCTTTTTGTTCGTCTTGTATGCAGTCAGAACGATGATTTTGGTCCGCTGA
TTTGAAACCGATTGAATTCACGACTGTTACACCGAACCTGATTTGAGGAG
GGCTGTGATGGGCAGACTTCACTAGACCAAGGCCGATCCAACACTATCAC
CGCGATAGCTCGTACGTACGGAGGCTACGTCTGCAGCGAGGAAGATTATA
TCGAATCCCTTCAAGGAATTGTTTGAGGGCCTCTGGGTGACAGGACTCTG
ATGCTTGCCTGCTATATATATGTGTGCAATTAAACGCGCCTTATCCAGTT
TTCAGGTATTCACGCCTATGATACGTTCGTGTACCGTGGATCGGAGAGAT
ATAGCAGGGCCTCGGGCGGGTTCCGCGGTAAAGCTGAATATTTTATACGG
TGTTTTTAGAACGCGGCGAGGAAAGGGTTTCAGACTCTGAAATTTGGCAT
ACGCATCC
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Coding sequence (CDS) from alignment at C-linearis_contig11:399160..403167+

>mRNA_C-linearis_contig11.1164.1 ID=mRNA_C-linearis_contig11.1164.1|Name=mRNA_C-linearis_contig11.1164.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at C-linearis_contig11:399160..403167+ (Chordaria linearis ClinC8C monoicous)
ATGAGCGAGGATGCAGCTGAGAGGAGGAAGCGGTTAAAAGCTCTCAAAGA
CAAGGCGACCAACAAGAGCATAAAGTTCAGGAACTACCGCCCACAAGACG
CGGCGATCAAGCAGCAGGCTCTCGACAGCAAGGGGAAGGGGGGCGGGGAA
GCAAGTAGTGGCGCCACTGCGTCATCGGTCAACGCAAGAAAAGATGAGCG
AGGATGCAGCTGAGAGGAGGAAGCGGTTAAAAGCTCTCAAAGACAAGGCG
ACCAACAAGAGCATAAAGTTCAGGAACTACCGCCCACAAGACGCGGCGAT
CAAGCAGCAGGCTCTCGACAGCAAGGGGAAGGGGGGCGGGGAAGCAAGTA
GTGGCGCCACTGCGTCATCGGTCAACGCAAGAAAAGTCGATGAAGAGGAG
GAGGAGGGGGAGGGGGGCGGGGAGGGGAAGAGAAAGGCAACGGCGCCAAG
CTTGATCCAGCAAGAGCTCAAGCGGCAAAAGTCGATGAAGAGGAGGAGGA
GGGGGAGGGGGGCGGGGAGGGGAAGAGAAAGGCAACGGCGCCAAGCTTGA
TCCAGCAAGAGCTCAAGCGGCAAAAGGAAACACAAGACGAGGAGGAGCTA
AACATCGCCCCCAAGAAGGCCAACTGGGACCTCAAGAGAGACGTGGAGAA
GAAGCTGGAGAAGCTAAACCGGAGGACACAGCGCGCGATCGTGGAGATCA
TCCGCGAACGCATGACCGAGGTATGCCATGCCCCCCCGCTGCTCTTCTCG
CGTGCATGCTTTTTTTTGTCGCGGCGCTTTGCTTCGGCAGAGATCTTTCT
TGCGCACCATCTCCAAGCATGGTCTTGTCTTGTTTTTCTATCTACCGTTC
AGGCTTTCTTTGTGCAGTGTTTTGTTTGGCGTGCGTTTGTTTATGCACAA
ATACCGCGTGTGCTGGGTGGCTGCATAGCATCCCTCTGTCTCTGTCTTGT
CTCTCTCCCTCTCTCTCCCTCGCTTTCGTCTCGTCGACCATGCGTGAGGG
ACGAATGGCTCAAGCACATTTATTCGGGGACGGCCTGCTATTGGTATGCA
GCGTGCTGAGAAACACAAGACGAGGAGGAGCTAAACATCGCCCCCAAGAA
GGCCAACTGGGACCTCAAGAGAGACGTGGAGAAGAAGCTGGAGAAGCTAA
ACCGGAGGACACAGCGCGCGATCGTGGAGATCATCCGCGAACGCATGACC
GAGGTATGCCATGCCCCCCCGCTGCTCTTCTCGCGTGCATGCTTTTTTTT
GTCGCGGCGCTTTGCTTCGGCAGAGATCTTTCTTGCGCACCATCTCCAAG
CATGGTCTTGTCTTGTTTTTCTATCTACCGTTCAGGCTTTCTTTGTGCAG
TGTTTTGTTTGGCGTGCGTTTGTTTATGCACAAATACCGCGTGTGCTGGG
TGGCTGCATAGCATCCCTCTGTCTCTGTCTTGTCTCTCTCCCTCTCTCTC
CCTCGCTTTCGTCTCGTCGACCATGCGTGAGGGACGAATGGCTCAAGCAC
ATTTATTCGGGGACGGCCTGCTATTGGTATGCAGCGTGCTGA
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