mRNA_C-linearis_contig11.1154.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1154.1
Unique NamemRNA_C-linearis_contig11.1154.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: D8LKK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK4_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 7.320e-102
Identity = 176/203 (86.70%), Postives = 185/203 (91.13%), Query Frame = 3 
Query:   81 MSRRRVVLKQQKPQGGGMQAAMKEMANLEEGMPAPYIPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKDKXXXXXXXXXXXXXXXXXXXXXNVKKKGKKKGKR 689
            MSRRRVV+KQQKPQGGGMQAAMKEMAN E+GMP PYIPP+KN+LYV+P EALR MDVSKLIVIWPNNVDSTRTIK+GRRIPKASGCPSPTVEDMS VLEFLQLWHAVEPYKAYPREPWVLGRVRVRL DEDGVPWNPEVPDRPSLMKKMGELMPNLKSR DR++K +KD     XXXXXXXXXXXXXXXXX     GKKKGKR
Sbjct:    1 MSRRRVVVKQQKPQGGGMQAAMKEMANFEDGMPTPYIPPDKNSLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 203
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A836CKP4_9STRA (Signal recognition particle, SRP19 subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP4_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.340e-35
Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 3 
Query:  132 MQAAMKEMANLEEGMPAPYIPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKDK 590
            M A MK M + ++ +P P   P+K   Y+ P + +  +D SK IV+WPN +D  +TI +GRR+ K   C  P V ++  + +   LW+A+EP+K YPREP+VLGRVRVR+   DG P +P++PD+ +L+KKMG L+PNL  R+DRL +  K+K
Sbjct:    1 MAALMKSMEDEQQELPPP---PDKTLSYLWPDD-MGEVDASKWIVVWPNYIDKAKTIAQGRRVAKEFACDIPIVIELGAICQAFNLWYALEPFKGYPREPYVLGRVRVRVTMPDGTPAHPDIPDKVALLKKMGTLIPNLHIRKDRLLQMSKEK 149
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A7S2B120_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B120_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.380e-29
Identity = 62/125 (49.60%), Postives = 81/125 (64.80%), Query Frame = 3 
Query:  195 PNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRL 569
            PN NT    PP     +D +K I +WP+N++S RT+ KGRR+P +  C  P V +MS VL+F +L H +EPYK YPR+    GRV+V+L DED  P + EVP R  LM KMGEL+P LK R  R+
Sbjct:   37 PNPNTKISWPPSMAGKLDDAKFICVWPSNINSKRTLAKGRRVPISHSCEDPIVAEMSEVLQFYKLNHVIEPYKCYPRDWTYPGRVKVKLFDEDDQPCSEEVPSRRVLMMKMGELIPKLKIRNKRM 161
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A6V2W292_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2W292_HETAK)

HSP 1 Score: 118 bits (296), Expect = 6.240e-27
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 3 
Query:  246 DVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRL 569
            D S+ I +WPNN++S +T+K+GRRI K   C  P VEDMS V ++LQL H  +PYK YPR+    GR+ VRL  EDG P+NP+VP R +L+ +MG L+P L +R+ RL
Sbjct:  107 DYSRFITLWPNNLNSKKTVKQGRRIGKEQACEDPIVEDMSEVCQYLQLHHVKQPYKGYPRDWLCQGRLLVRLTREDGTPYNPKVPTRRALLVEMGRLIPKLSNRQRRL 214
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A7S2SLH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.580e-26
Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 3 
Query:  189 IPPNKNTLYVKPPEALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQ 581
            + P+ NT    P      +D S+ +VIW  N++ +  + +GRRIP AS C  P V +MS VL+  +L H +EP+K YPR   V GRVRV+L+D++  P NPEVP R  LM +MGEL+P LK R  R+A +Q
Sbjct:   36 VAPDPNTKITWPQSLAGKIDDSRFLVIWTININRSFKLSEGRRIPIASACEDPIVAEMSEVLQHFKLTHVIEPFKVYPRV-MVPGRVRVKLIDDEDQPCNPEVPTRRVLMMRMGELIPKLKIRSQRIAMQQ 165
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A8J5IME7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IME7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.330e-25
Identity = 53/112 (47.32%), Postives = 80/112 (71.43%), Query Frame = 3 
Query:  252 SKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKD 587
            S  +  +PN +D+ +T+++GRRIPK + C +P  ++MS V  + +L H +EP K YPR+  V GR+RVRLV +DG P NP++P+R +LM KM EL+P L+SR+ RL KE ++
Sbjct:   54 SSFMTFYPNYIDNKKTVQQGRRIPKQNACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLVRDDGSPENPDIPNRKTLMIKMAELIPKLQSRKVRLEKEAEE 165
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: M4BW27_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW27_HYAAE)

HSP 1 Score: 110 bits (276), Expect = 8.140e-25
Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 3 
Query:  252 SKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKD 587
            S     +PN +DS RT+++GRRIPK+  C +P  ++MS V  FL+L H +EP K YPR+  V GR+RVRLV EDG   NPE+P+R +L+ KM +L+P L+SR+ RL KE ++
Sbjct:   52 SMFYTFYPNYLDSKRTVQQGRRIPKSMACEAPIADEMSEVCTFLKLPHVLEPTKKYPRDWLVAGRIRVRLVREDGSLENPELPNRKALILKMADLIPKLQSRKVRLEKEAEE 163
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A067CX32_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CX32_SAPPC)

HSP 1 Score: 111 bits (277), Expect = 6.260e-24
Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 3 
Query:  246 DVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKDKXXXXXXXXXXXXXXXXXXXXXNVKKKGKKKGKR 689
            D S+    +PN +DS +T   GRRIPKA  C  P VE+M+ V  + +L H  EPYKAY R+  V GRVRV+LVD +G P + E+  R  LM KMGEL+P L+ R+DRLA+E +                       + KKKGKKKG+R
Sbjct:  155 DFSRWATFYPNYIDSGKTNADGRRIPKAMACDRPIVEEMAEVCRYFKLDHVTEPYKAYSRDFLVPGRVRVKLVDANGSPVHAEIRTRKDLMLKMGELIPKLQLRKDRLARELE-------AAKAATTGAPATGAAASSKKKGKKKGRR 295
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: A0A6A3TTV6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TTV6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 8.620e-24
Identity = 57/112 (50.89%), Postives = 80/112 (71.43%), Query Frame = 3 
Query:  258 LIVIWPNNVDSTRTIKKGRRIPKASG--CPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKD 587
            L+  +PN +DS +T+++GRRIP+A    C +P  ++MS V  +L+L H +EP K YPR+  V GRVRVRLV +DG P NPEVP R +LM KM EL+P L+SR+ RL +E ++
Sbjct:  124 LMTFYPNYIDSKKTVQQGRRIPQAQAQACETPLADEMSEVCTYLKLPHVLEPAKKYPRDWLVSGRVRVRLVRDDGSPENPEVPTRKALMVKMAELIPKLQSRKLRLEREAEE 235
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BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Match: D0MUF1_PHYIT (Transmembrane protein, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MUF1_PHYIT)

HSP 1 Score: 108 bits (271), Expect = 2.440e-23
Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 3 
Query:  252 SKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRRDRLAKEQKD 587
            S  +  +PN +D  +T+++GRRIPK S C +P  ++MS V  + +L H +EP K YPR+  V GR+RVRL+ +DG P N ++P+R +LM KM EL+P L+SR+ RL KE ++
Sbjct:  129 STFMTFYPNYIDDKKTVQQGRRIPKLSACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLLRDDGTPENADIPNRKTLMIKMAELIPKLQSRKVRLEKEAEE 240
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKK4_ECTSI7.320e-10286.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKP4_9STRA7.340e-3545.10Signal recognition particle, SRP19 subunit n=1 Tax... [more]
A0A7S2B120_9STRA1.380e-2949.60Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2W292_HETAK6.240e-2751.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SLH7_9STRA6.580e-2645.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J5IME7_9STRA3.330e-2547.32Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
M4BW27_HYAAE8.140e-2550.00Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A067CX32_SAPPC6.260e-2444.59Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6A3TTV6_9STRA8.620e-2450.89Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D0MUF1_PHYIT2.440e-2346.43Transmembrane protein, putative n=13 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:125666..129861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.8
Seed ortholog evalue1.2e-82
Seed eggNOG ortholog2880.D8LKK4
Preferred nameSRP19
KEGG koko:K03105
KEGG TC3.A.5.7,3.A.5.9
KEGG Pathwayko03060,map03060
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005786,GO:0005829,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006617,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008312,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0022607,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0042221,GO:0042493,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0048500,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0065003,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:1901363,GO:1990904
EggNOG free text desc.Signal recognition particle
EggNOG OGsCOG1400@1,KOG3198@2759
Ec32 ortholog descriptionSignal recognition particle, SRP19 subunit
Ec32 orthologEc-16_003290.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02044
Exons5
Model size1369
Cds size612
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927431.2904212-UTR-C-linearis_contig11:125665..1257451622927431.2904212-UTR-C-linearis_contig11:125665..125745Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 125666..125745 +
1690879695.7560034-UTR-C-linearis_contig11:125665..1257451690879695.7560034-UTR-C-linearis_contig11:125665..125745Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 125666..125745 +
1622927431.369821-UTR-C-linearis_contig11:129184..1298611622927431.369821-UTR-C-linearis_contig11:129184..129861Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 129185..129861 +
1690879695.818284-UTR-C-linearis_contig11:129184..1298611690879695.818284-UTR-C-linearis_contig11:129184..129861Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 129185..129861 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927431.3050265-CDS-C-linearis_contig11:125745..1258171622927431.3050265-CDS-C-linearis_contig11:125745..125817Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 125746..125817 +
1690879695.7695546-CDS-C-linearis_contig11:125745..1258171690879695.7695546-CDS-C-linearis_contig11:125745..125817Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 125746..125817 +
1622927431.3187118-CDS-C-linearis_contig11:126940..1270161622927431.3187118-CDS-C-linearis_contig11:126940..127016Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 126941..127016 +
1690879695.7792943-CDS-C-linearis_contig11:126940..1270161690879695.7792943-CDS-C-linearis_contig11:126940..127016Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 126941..127016 +
1622927431.3301508-CDS-C-linearis_contig11:127413..1275211622927431.3301508-CDS-C-linearis_contig11:127413..127521Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 127414..127521 +
1690879695.7912073-CDS-C-linearis_contig11:127413..1275211690879695.7912073-CDS-C-linearis_contig11:127413..127521Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 127414..127521 +
1622927431.3421261-CDS-C-linearis_contig11:128114..1282821622927431.3421261-CDS-C-linearis_contig11:128114..128282Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 128115..128282 +
1690879695.8014345-CDS-C-linearis_contig11:128114..1282821690879695.8014345-CDS-C-linearis_contig11:128114..128282Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 128115..128282 +
1622927431.3559465-CDS-C-linearis_contig11:128996..1291841622927431.3559465-CDS-C-linearis_contig11:128996..129184Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 128997..129184 +
1690879695.8095505-CDS-C-linearis_contig11:128996..1291841690879695.8095505-CDS-C-linearis_contig11:128996..129184Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 128997..129184 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1154.1prot_C-linearis_contig11.1154.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 125746..129184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1154.1

>prot_C-linearis_contig11.1154.1 ID=prot_C-linearis_contig11.1154.1|Name=mRNA_C-linearis_contig11.1154.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=204bp
MSRRRVVLKQQKPQGGGMQAAMKEMANLEEGMPAPYIPPNKNTLYVKPPE
ALRSMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSHVLEF
LQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMG
ELMPNLKSRRDRLAKEQKDKEASARAEKEKAAAAIAAASQSNVKKKGKKK
GKR*
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mRNA from alignment at C-linearis_contig11:125666..129861+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1154.1 ID=mRNA_C-linearis_contig11.1154.1|Name=mRNA_C-linearis_contig11.1154.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4196bp|location=Sequence derived from alignment at C-linearis_contig11:125666..129861+ (Chordaria linearis ClinC8C monoicous)
GTCTTGTTGTGCCTGCTGTGTCTTGCGCAACAGTAGCCAGTAGCAGAGAC
TGGCTGCTGTGTGCAGAACCGTCAGCAACCATGTCTCGACGCCGGGTAGT
CTTGAAGCAGCAGAAGCCTCAGGGAGGCGGGATGCAGGCGGCTATGAAAG
AGGTGGGTGGGCCATGGAAGACGGTCGCGTAGGAGAGAAGAGACCGCACG
GAATGACGAGAAGCACGAGCCGCAGCACACAGCACCCAGCACGCGTGCGT
TGGCCTGCAGAAGATGCCCGTCGTGTAGAGCAGGATGACTTCTGCCACGT
TGTTCGGGTATGGGGGTACTGTAAGCTATCGAAAGGTGTGGTTGGACGCA
AATCCAGTGTGTCGGTGACAACGCTACCTCCAGCTTCTGGTTTTTCGTCG
GAGATTGACTTCCGATGTTCGTCAAACCCCCTTCGGCCCACAAGGCATAG
GCCTGACTGAGAGAGACTATTGCAGCAGGGTCGCTGGGAGCTCTACACTG
TAGACTGTTCGTAGCTTCAATTTTTCCATCCCACGGAGAAGTTGCCCTGA
GGACCAGAGTGCAGTGTGCATGCGGCATTGCGGCTGTGGTACTCATCTGT
GTGTTGTGTGTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGTCCCTCC
GATCAAGGCGAGACGTGTACCAGTACTACACGTTGCGGTGTATTTAGAGT
ACAGCTACTACATTTGTTCAGCGTATTTTTCTGTACAACTAGAACCAACC
GGGTTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCTTTTTCTG
TTTTGCGGCGCAGCTATTGGGGAGAGCGCTCCACATTTGATTATGCAGTG
TTTATGCGGTGCACACCAGTCCGACGATGCGTTGAATATATTCGAGCCGC
TTTGCGTTCCTTTGCACACACGAGGTTTCCTCAGTCAGAACGACGAGAGC
CTCAACTCGAGTTGTGTGAGGTTACAGCAGTTGTGCGTGCCTTGACTGAT
ACAATAGGCTCCCAGCCACTGCTCGCGATGCTATTTGATCCCTATGCTGG
GGTGTAGGTGACGATACGAGCCTGCAGCAATGAGCGTTACAGCTCTGAGA
GCTCAACGGTCTGTCCGCCACTAAATGTACTGTTGCTGCTAGAGAATCAA
GACGAGGTTTCGCGTTTTCGCTGACTTTCCTTGAGATCCAGTATCGTTTC
TTCACCACCTCCTGGCCCTCACGATACACGTCCTTGACAGCGCCACAACA
ACCCCTCTATCTCATCTCCCTGCAGATGGCTAATTTGGAGGAAGGTATGC
CCGCCCCGTACATCCCTCCGAACAAGAACACCCTCTACGTTAAGCCCCCA
GGTAGTATGTATAACTCTTTTGCTGGGTAGGTTGTTTGGCGGACGTATGT
AGTACCAGGTAGGCTACCAAATGCTGCTACGAGTACTCAAGAGGGCTTTG
GGCGGGTGGACATACATACGTGCGCCTCGTTTGTTTGTTGCTTATGAACG
TACGGACTTTCGCCATTCACGCTTCTGCGGCACGCGGTTTACGACATGGA
GTCGCTTGTGAGGGCATCCGCCGATCGATCGCTACACGAGGGCAGTAGGA
CTCCAGCTACACCCCAGCCTTCCCAGCCTCGTCGTGGTCGTTTCGACACC
GTGGTTTCAACTTGCAACTTGTGTTTCTGTTTTTTGCCGGCCAAACCAAC
GTCGTATATTCTTGCCGACGCCAACCCAAAACGCTCAATCAATCGCAGAG
GCGCTGCGGAGCATGGACGTGTCGAAGCTGATAGTAATCTGGCCCAACAA
TGTCGACTCTACGCGGACCATCAAGAAGGGCAGAAGAATACCCAAGGCTA
GCGGATGTGAGCACGTCCACGGAAGCAGGACTGTGGGAGGCGGGGGGGGA
GGGGCGTACTCGTGTGGTGTGGAATTTGGCTTGTGTTGTGAGACAGCACT
CGACTAATAACAATATTTCGTCCGAATGTTTCGGTCAAAGAAGGTAGCGT
TGAGTTGCGCCGCCCTTGGGGTATAGCCGACAAGATGGACGCTTGACGAA
TATGCTGTTTTTTGTTCGCTCACCCCTCAATTGATTTTTTTTTAGTGCAT
GTAGCACACGACCCAAGGCGCGGGTCATGTGATACCCCAACACCGACGTT
CTCGATGTAGCAGGACACTCACACGCATCACCCCCCATTCCTTGCAGCGC
ACCGACAAGCGGAAGAGTCGAAAGCGACAGGCGCGGTAGGTAGGCTGCTC
TGCTCATACGCGACTGTGCCCCCCTATCCCCTAGTCCTGTTCTTTGGGTG
CTTCTTGGCGTGGCCGTGCGCGTTCGTCGAAAAAACGACGATAAAAGGCA
TGACCCCCTGGACTCGAGAGATTTTACCGCTTTTGGAAATGGCATACTTC
GAAGTATGCCCACGCAAAGCGCTCCACCTCCGTGTAATGTGCTGATCAGG
TCCATCGCCGACGGTGGAGGACATGTCCCATGTCTTGGAGTTCTTGCAGC
TGTGGCACGCCGTGGAGCCGTACAAGGCCTACCCCCGGGAGCCGTGGGTG
TTGGGACGCGTGAGGGTCAGGCTTGTGGATGAGGATGGCGTGCCCTGGAA
TCCGGAAGTTCCCGATCGTGAGTGTTTGATGGTGTTGTTTGCTTTCCGCT
CGTGTCATGCCATGCCATGCCATGCCATGCCATGCAATGTGTTCTCTTGG
CGGCTCTTCTGTTCCTCTCTCGCGATCTCTTCAGCCTCCTTGGTAAGTGC
CTGGGTATTGACACACACAGGCTTGCTCTGCTTGATAGTCCTTCGGTCGT
CTGGTCTGGCTTGGCCAAAAGGGTGGTGATGCTGTCCCCAATCTCCCTCG
AAACCATATTATAGTCATGCTCGTGAAGCATGCGATTTCTTGGTTTTGTG
TTCGTATGGCGGCGTAGTTGTGTTTGGTGGCGTTGTGTACTGGCAGGACA
GACGACGGTGTTATCGGCTGGCTGATGCGTTGACTCTGTTCTGTTTTTGT
GTGGTTCTGCCGTATGAGTCATGCCATGGGGGTAGACAAGCTTTAACCAA
CGGAGGAGGAAAGAAGACGGCCTGGCACCCTGTAAGCACCCCTTTCCTTT
GACGCAGTTGCTTTGCTGGCACAAGCTGTGTCTTGTTGTGTTCCGAGTCA
CTTTGGTGGGAATACCCATATTTTGGTGGGAATTAGGATATTTTTCCTGC
CATTTGAGGTGTGTGTTCGAGCACGCGAAAGCGTATGTGTGCTCGGAATT
TACCCTCTCCTGGCTTCCAATATGTCGCTACTTGTCGACTAACGAACGAA
CACGCCCCCTCCCCTGAATCGCACAAATCAGGGCCGTCGTTGATGAAGAA
GATGGGGGAGCTGATGCCAAATCTCAAGAGCCGTCGCGACCGGCTCGCGA
AGGAGCAGAAGGACAAAGAGGCGTCCGCAAGGGCGGAAAAGGAAAAAGCC
GCGGCTGCCATCGCGGCCGCCTCCCAGTCGAACGTGAAAAAGAAGGGCAA
GAAGAAGGGGAAGCGATAGGATAGAAATTGCTCCTCTTTACTGTTTTTTT
TAGAGCTGTTCCATCGTGTCCCGGATTCGTGAGACCGCCAAATAATCAGT
GCATAAACGGCGCAAAAGGTTGTATTATTTTTTTTGGCTGTTGAAGCGCC
GTGAAGTGTCGTTGCCCACCTTTTCCTCTTCGAGAGCGGCGGTTGGAATT
CTCGCACCGAGTTTGTAATGGTACAGCATGCAGAAGCGCGACGGGTGTAA
GCATTAGCGGATGAGGCGGGCGTGTCGTCCGTCTGTCGCCGAGCGGGACC
GTGACTGGTGAACAAGACGGCAGCCTCTCTGTATTCAGTAGATTCTGTTG
CACCAGCTGCTGCTGGTGGCTTATTTTCGCAAGGTGTACTTTTTTTTTGT
CTCCGTGGGTAGGAGTTACACATGGCTTGCGGGCGAGATCGCTCCTTTCT
GTTTGGAGACATTTTCTTCTTGGAAAATTTCGGTTTGGTGGTGGATGGTG
GGGGAATGCTTGCCACTATCCTTTGCCCGGCACACTAGACTGCAAAAAAT
TTCGTCTTGGTAACCCTTGCCTTGTGTGCGCCTCAGAGACCAACGAGTTT
AACAACCGCTTGTAATTGGTCGTAGAGAGGGAGACATGAGGAGAGGGAAG
AGGAAGAAGACAAGAAGAGTGCCAAAACCAGTCGAGAAGGGGGCCC
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Coding sequence (CDS) from alignment at C-linearis_contig11:125666..129861+

>mRNA_C-linearis_contig11.1154.1 ID=mRNA_C-linearis_contig11.1154.1|Name=mRNA_C-linearis_contig11.1154.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at C-linearis_contig11:125666..129861+ (Chordaria linearis ClinC8C monoicous)
ATGTCTCGACGCCGGGTAGTCTTGAAGCAGCAGAAGCCTCAGGGAGGCGG
GATGCAGGCGGCTATGAAAGAGATGTCTCGACGCCGGGTAGTCTTGAAGC
AGCAGAAGCCTCAGGGAGGCGGGATGCAGGCGGCTATGAAAGAGATGGCT
AATTTGGAGGAAGGTATGCCCGCCCCGTACATCCCTCCGAACAAGAACAC
CCTCTACGTTAAGCCCCCAGATGGCTAATTTGGAGGAAGGTATGCCCGCC
CCGTACATCCCTCCGAACAAGAACACCCTCTACGTTAAGCCCCCAGAGGC
GCTGCGGAGCATGGACGTGTCGAAGCTGATAGTAATCTGGCCCAACAATG
TCGACTCTACGCGGACCATCAAGAAGGGCAGAAGAATACCCAAGGCTAGC
GGATAGGCGCTGCGGAGCATGGACGTGTCGAAGCTGATAGTAATCTGGCC
CAACAATGTCGACTCTACGCGGACCATCAAGAAGGGCAGAAGAATACCCA
AGGCTAGCGGATGTCCATCGCCGACGGTGGAGGACATGTCCCATGTCTTG
GAGTTCTTGCAGCTGTGGCACGCCGTGGAGCCGTACAAGGCCTACCCCCG
GGAGCCGTGGGTGTTGGGACGCGTGAGGGTCAGGCTTGTGGATGAGGATG
GCGTGCCCTGGAATCCGGAAGTTCCCGATCGTCCATCGCCGACGGTGGAG
GACATGTCCCATGTCTTGGAGTTCTTGCAGCTGTGGCACGCCGTGGAGCC
GTACAAGGCCTACCCCCGGGAGCCGTGGGTGTTGGGACGCGTGAGGGTCA
GGCTTGTGGATGAGGATGGCGTGCCCTGGAATCCGGAAGTTCCCGATCGG
CCGTCGTTGATGAAGAAGATGGGGGAGCTGATGCCAAATCTCAAGAGCCG
TCGCGACCGGCTCGCGAAGGAGCAGAAGGACAAAGAGGCGTCCGCAAGGG
CGGAAAAGGAAAAAGCCGCGGCTGCCATCGCGGCCGCCTCCCAGTCGAAC
GTGAAAAAGAAGGGCAAGAAGAAGGGGAAGCGATAGGGCCGTCGTTGATG
AAGAAGATGGGGGAGCTGATGCCAAATCTCAAGAGCCGTCGCGACCGGCT
CGCGAAGGAGCAGAAGGACAAAGAGGCGTCCGCAAGGGCGGAAAAGGAAA
AAGCCGCGGCTGCCATCGCGGCCGCCTCCCAGTCGAACGTGAAAAAGAAG
GGCAAGAAGAAGGGGAAGCGATAG
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