mRNA_C-linearis_contig11.1152.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A6H5K4C1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4C1_9PHAE) HSP 1 Score: 528 bits (1361), Expect = 1.010e-180 Identity = 285/438 (65.07%), Postives = 320/438 (73.06%), Query Frame = 1
Query: 19 WLVAVATTSCGRRRASDAVSLKAFVYTGSSXXXXXXXXXXXXXXAPYRVRPLFDARRRCSSTSRVFSGRSRSTAMSSVSMGGGDENGESWCGHELLNTVTTDWV----------ALVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQAS------AVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVER 1284
WL+ TTS GRRR S +AFV P RV+P R CSST+ S R TA+ + + G ESWCGHELLNTVTT WV ALVDIRGQV+KHR+EGSDFFST Y+G+ A+YLDAHIPGAVFVDWT+DIA TDE+GVPAQL DRE+FV M+ERGV KRVVVYDNGDMLFATRFWWAMRRFGHDRV+VMDGGWAKWQAE RDITPDCPCPLKVYT+WGIPPERERPGL+ AD+RAA+ + +EKAG S AVQLLDARAAAQ+TGEVRRA GG IPGAVNTPYR+FLAE PDG +FRVFKDL+ I EVF++AAVDTSPSAAP++AYCNGGVASTVVLFLLF LR + G + +GS G G G W+NYDGSWNEWGNDE APVER
Sbjct: 6 WLLVAVTTSAGRRRVSAGPPAEAFV------------NHRLLSSTPLRVKPRLGCRLLCSSTTPAASIRRSLTAVMATAGAG-----ESWCGHELLNTVTTAWVEDHLGDPEPVALVDIRGQVVKHRDEGSDFFSTRYEGMEADYLDAHIPGAVFVDWTKDIAHTDENGVPAQLTDRESFVIAMQERGVGADKRVVVYDNGDMLFATRFWWAMRRFGHDRVAVMDGGWAKWQAEERDITPDCPCPLKVYTEWGIPPERERPGLITTSADIRAALAR-REKAGGGSDHQADAAVQLLDARAAAQYTGEVRRARLGGHIPGAVNTPYRSFLAEGTGPDG-SFRVFKDLEGITEVFESAAVDTSPSAAPIIAYCNGGVASTVVLFLLFQLRELRGDGAATASSGSDSDGFGRG------WWSNYDGSWNEWGNDELAPVER 418
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A835Z9V6_9STRA (Sulfurtransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V6_9STRA) HSP 1 Score: 320 bits (820), Expect = 3.280e-100 Identity = 173/345 (50.14%), Postives = 214/345 (62.03%), Query Frame = 1
Query: 280 ESWCGHELLNTVTTDWV---------ALVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDR--VSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVE 1281
+ WC HEL N VTT+W+ A+VDIRG V K +E GSDF ST Y+GL +YL+ HIP AVF DWT+DIA D +GVPAQL+DRE F ME RG+ G+RVV YDNG+MLFATR WWA+RR+G +SV+DGGWAKW AE R +T + CPLK+ +WGI PE E+P L R E+ + + + + L+DARAA Q+TGEVRRA RGG IPGA+NTPY+AFL P ++ K L + EV ++A VDTS P AYCNGGVASTV +F L+ L G+A+ NYDGSWNEWGN E P E
Sbjct: 47 DRWCNHELRNVVTTEWLQEHMFDAELAIVDIRGAVKKGQEPGSDFVSTVYEGLHEDYLELHIPNAVFADWTKDIAGRDANGVPAQLSDREAFAEAMEARGIGRGRRVVAYDNGNMLFATRLWWALRRYGFPEADISVLDGGWAKWVAEDRPVTDEVACPLKLLGEWGIEPEAEQPWL-------RLTAEQLQARLLERPQLHLIDARAAEQYTGEVRRAQRGGHIPGALNTPYKAFLQGGQGP----YKTLKPLAGLREVLQSAGVDTSQ---PAAAYCNGGVASTVAMFALYQL-------------GNARV-------------TNYDGSWNEWGNREDLPAE 351
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A7S2XZ51_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ51_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.400e-77 Identity = 149/333 (44.74%), Postives = 197/333 (59.16%), Query Frame = 1
Query: 313 VTTDW-------VALVDIRGQVIK-HREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPD-CPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQ-ASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVE 1281
VTT+W V +VDIRG+V K + S Y+ L +Y ++HIPGAVFVDWT+DIA + GV AQL R+ F+ MEERG+ G VVVYD+G MLFATRFWWAM+ +GH V+V+DGGWAKWQAE R+ + + PCPLK + DW IP E +CM ++ + E +K + +S QL+DAR A QF GE RRA+R GRIPG+++ PY++ L +R E + V K +A+ + A VD + +AYCNGGVASTVVL L L + W+NYDGSWNEWGN++ P+E
Sbjct: 68 VTTEWLEDHIDDVKVVDIRGKVRKLGGTDESGLLLHQYEALDKDYWESHIPGAVFVDWTKDIA-KEVGGVKAQLKPRDEFITAMEERGIGGDTSVVVYDSGSMLFATRFWWAMKVYGHQNVAVLDGGWAKWQAEERETSNEGMPCPLKAHQDWNIPEE-------SCMPEILSTAEDVLQKCVENSSGPQLVDARGAVQFRGEERRANRAGRIPGSISLPYKSLLEKR-----EGYTVLKSKEALQSTLEQAGVDIGKT---TIAYCNGGVASTVVLLALHLLGND--------------------------FWSNYDGSWNEWGNEDELPIE 358
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A6V1S6S1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S6S1_HETAK) HSP 1 Score: 239 bits (610), Expect = 9.110e-69 Identity = 155/346 (44.80%), Postives = 195/346 (56.36%), Query Frame = 1
Query: 313 VTTDWV---------ALVDIRGQVIKHREEGSDFFSTA---YKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDIT--PDCPCPLKVYTDW--GIPPERERPGLVACMADV--RAAVEKQKEKAGQ--ASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESA---PVE 1281
V+T+W+ ++D+RG+V K G D + Y+GL +YL++HIPGA++VDWT+DIA D GVPAQL E FV MEERGV GKRV VYD G +++ATR WWA+R +G D V V+DGGWAKW AE R + PCP K + W G P RP L A DV R + GQ S QL+DAR A Q++G RRA RGGR+PGA++ PYRA LA+R +G+ + K L+ + + VD A P + YCNGGVAST+VLF L L G EG W+NYDGSWNEWGN E A PVE
Sbjct: 74 VSTEWLEDHLGDEDLVIIDVRGEVAK--TGGFDEYGAINHEYRGLYNDYLESHIPGAIYVDWTKDIAGPDAAGVPAQLLPFEQFVTAMEERGVGEGKRVAVYDGGRLIWATRLWWALRTYGFDAVGVLDGGWAKWAAEGRPTAGGAEAPCPPKAHARWPAGAAP---RPALYAAAEDVVSRRLAPARFAPGGQDDPSLPQLVDARDARQWSGRERRARRGGRVPGALSLPYRALLAQRG--EGDVLVMQKPLE-LRSTLEYLGVDP---ARPGIVYCNGGVASTLVLFALHLL-----------------------GQDEG--WSNYDGSWNEWGNLEDAAKFPVE 383
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: W7TKF1_9STRA (Rhodanese domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF1_9STRA) HSP 1 Score: 216 bits (551), Expect = 5.030e-60 Identity = 133/349 (38.11%), Postives = 182/349 (52.15%), Query Frame = 1
Query: 298 ELLNTVTTDWVA---------LVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERER----------PGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAER-ASP-DGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMA-YCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPV 1278
+L VTT+W+A ++D+RG+V K S Y L+ +Y+DAHIP A FVDW +DIA+TD+ GVP Q+ + F ME RGV KRVV+YDNG+ LFATR WWA+R GH V+++DGGW KW AE +T D PCPLK+ W E E P ++ + ++ +E +G + VQ++DAR+ Q+ G + R+SR G IP A + PY+ L P +R+ K DA+ + A V A P+ YCNGGVASTVV+F+L L + +N+DGSWNEWG E PV
Sbjct: 97 DLPGLVTTEWLADHVDDEDLAILDVRGEVAKAPVTNGTQESE-YIALKGDYVDAHIPNAAFVDWIDDIAYTDDAGVPVQILPLDDFRVCMESRGVGLRKRVVIYDNGNFLFATRLWWALRIAGHQAVAILDGGWNKWLAEDWPVTADAPCPLKINEAW----ESEFIATSVDGAMIPSFLSSRVNASQVLQFCQEDSGSEN-VQIIDARSREQYMGRISRSSRAGHIPRARSLPYKDLLTPPIVHPLSRHPYRLIKSKDALELTLREAGVSIDGQATPLTCVYCNGGVASTVVIFVLNQLYGM--------------------------RTSNFDGSWNEWGKREDFPV 413
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: L1IK63_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IK63_GUITC) HSP 1 Score: 206 bits (525), Expect = 7.510e-58 Identity = 132/334 (39.52%), Postives = 172/334 (51.50%), Query Frame = 1
Query: 313 VTTDW-------VALVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGN---DESAPVER 1284
V+TDW V ++DIRG+V K E +DF T Y+ + ++L+ HIPGA FVDWT DI + VP QL+ ++ F A MEERGV VVVYDNG+MLFATR WWA+ +GH V +++GGW +W AE RDI+ D CPLK Y ++ E P L +D+R ++K + ++DAR AAQFT + RRA R G IPGA N PY+ + K++ + YCNGGVAST VLF L+ L G+ +NYDGSW EWGN DE PV R
Sbjct: 21 VSTDWLQEHLEEVTILDIRGEVEKLPAE-ADFVQTVYRPCKEDFLNGHIPGAEFVDWTADIV-DPQSLVPVQLSPKDLFEAAMEERGVCNDNTVVVYDNGNMLFATRLWWALTYYGHKDVRILNGGWKRWCAEERDISVDTECPLKKYAEFNA--RVELPSLRCVASDMREVIKKTSDAC-------IVDARNAAQFTSKERRAKRSGCIPGATNIPYKRLIN-------------KEMGGY------------------LRYCNGGVASTAVLFALWKL-------GIPLCN-----------------LSNYDGSWGEWGNQEDDELYPVAR 288
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: UPI00064C0A84 (sulfurtransferase n=1 Tax=Rubrobacter aplysinae TaxID=909625 RepID=UPI00064C0A84) HSP 1 Score: 204 bits (518), Expect = 1.000e-56 Identity = 141/333 (42.34%), Postives = 171/333 (51.35%), Query Frame = 1
Query: 313 VTTDWVA---------LVDIRGQVIKH-REEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVE 1281
V+T W+A +VDIRG V KH RE+GS Y+G EY +AH+PGAVFVDWT DI D D VP QLA E F A M+ RG+ RVV+YD+ FATR WWA+ +GHD V+DGGW KW AE R +T + P V ++ + P RPGL + A+ A E LLDAR QFTGEVRR RGG IPGA + L A D ET F I ++ + A V A PV+AYCNGGVA+TV LF L+ L + +NYDGSWNEWG PVE
Sbjct: 11 VSTSWLAEHLDDPDLRVVDIRGYVDKHTREDGSQ--EAIYRGAPEEYAEAHVPGAVFVDWTTDITDPD-DPVPTQLAPPERFAAAMQSRGIGDSTRVVIYDHTGGQFATRLWWALLYYGHDETYVLDGGWRKWTAEARPVTDEISRP--VPANFTLEP---RPGLRSGAAEALVASEDGNTL--------LLDARDRGQFTGEVRRGPRGGHIPGARH------LHADALKDPET-GTFLARAEIEQLAREAGVPEDRDA-PVVAYCNGGVAATVALFNLYRLGYTN--------------------------LSNYDGSWNEWGGRGDLPVE 293
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A6G8PT74_9ACTN (Thiosulfate sulfurtransferase n=1 Tax=Rubrobacter marinus TaxID=2653852 RepID=A0A6G8PT74_9ACTN) HSP 1 Score: 202 bits (514), Expect = 2.980e-56 Identity = 141/333 (42.34%), Postives = 170/333 (51.05%), Query Frame = 1
Query: 316 TTDWVA---------LVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRR-ASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVER 1284
TT W+A +VDIRG V K R+ G Y G R EY +AHIPGAV+VDWT DI D D VPAQLA E F A+M G+ G VVVYD+ FATR WWA+ +GHDRVSV+DGGW KW AE R TP+ P P T G P R RP A +V AG+ +LDAR Q+TG + R A R G +PGA + A+ +G TFR +DL+ + + V PV+AYCNGGVA+TV LF + L G K + ANYDGSWNEWG E P ER
Sbjct: 8 TTTWLAEHLDDGALRVVDIRGYV-KKRDLGEGRQEAEYSGAREEYEEAHIPGAVYVDWTSDITDPD-DPVPAQLAPPERFAALMGSLGIGDGAHVVVYDHAGGQFATRLWWALTFYGHDRVSVLDGGWRKWTAEGRPTTPEIPAP----TPAGFTP-RPRPEWRASAEEVL--------DAGRTGDALILDARDRGQYTGSITRGAGRPGHVPGAAH-----LHADSLFEEGGTFRSREDLE---QKLREGGVPEDRET-PVVAYCNGGVAATVPLFAMHRL----GYKNL----------------------ANYDGSWNEWGVREDLPAER 290
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A2N5KFF0_9ACTN (Thiosulfate sulfurtransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5KFF0_9ACTN) HSP 1 Score: 200 bits (509), Expect = 1.610e-55 Identity = 141/334 (42.22%), Postives = 173/334 (51.80%), Query Frame = 1
Query: 316 TTDWVA---------LVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLADRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKV-YTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRR-ASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEVFKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVER 1284
TT W+A +VDIRG V K ++ G Y G R EY D+HIPGAV+VDWT DI D D VPAQLA E F A+M GV G RVVVYD+ FATR WWA+ +GHDRVSV+DGGW KW AE R T + P P +T R R A +V AA G+ A +LDAR A Q+TG + R A R GR+PGA + A+ +G TFR ++L+ + + A V PV+AYCNGGVA+TV LF + L G K + ANYDGSWNEWG E P E+
Sbjct: 9 TTTWLAEHLQDPDLRIVDIRGYV-KKKDLGDGRQEAEYTGARDEYEDSHIPGAVYVDWTSDITDPD-DPVPAQLAPPERFAALMGALGVGDGTRVVVYDHAGTQFATRLWWALTFYGHDRVSVLDGGWKKWTAEGRPTTSEVPAPEPATFTP------RPRSEWRATAEEVLAA--------GENGAAFVLDARDAGQYTGAITRGAGRPGRVPGAAH-----LHADTLFEEGGTFRSKEELE---QKLREAGVPEDRDE-PVVAYCNGGVAATVPLFAMHRL----GYKNL----------------------ANYDGSWNEWGTREDLPAEK 291
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Match: A0A061S136_9CHLO (Thiosulfate/3-mercaptopyruvate sulfurtransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S136_9CHLO) HSP 1 Score: 199 bits (506), Expect = 4.820e-54 Identity = 132/334 (39.52%), Postives = 174/334 (52.10%), Query Frame = 1
Query: 307 NTVTTDW-------VALVDIRGQVIKHREEGSDFFSTAYKGLRAEYLDAHIPGAVFVDWTEDIAFTDEDGVPAQLA-DRETFVAVMEERGVAGGKRVVVYDNGDMLFATRFWWAMRRFGHDRVSVMDGGWAKWQAERRDITPDCPCPLKVYTDWGIPPERERPGLVACMADVRAAVEKQKEKAGQASAVQLLDARAAAQFTGEVRRASRGGRIPGAVNTPYRAFLAERASPDGETFRVFKDLDAINEV-FKAAAVDTSPSAAPVMAYCNGGVASTVVLFLLFHLRHVGGRKGVSREAGSAKKGDGGGGVSEGGAWANYDGSWNEWGNDESAPVE 1281
+ V+T W V+L+D+RG+V K + G + Y L EYL+ HIPGA FV W D GVP QL D F A MEE+GV+ + VVVYD GD L A R WWA+ GH V V+DGGWAKW++E R T + PCPLKVY+++ + GL ++ +E+ K +G+ V L+DAR QF G +RRA+RGGRI GAV+ P R L G + + + E K A +P +AYCNGGVA+T VL L L G+ + +ANYDGSWNEWGN + P+E
Sbjct: 84 SVVSTSWLEENLEDVSLLDVRGKVEK-KMTGKGTEESTYLDLHDEYLEGHIPGACFVSWLRD-GIDSASGVPVQLTTDGAQFCACMEEKGVSSDRPVVVYDLGDNLLAPRLWWALTYHGHPEVYVLDGGWAKWESEGRPTTTEEPCPLKVYSEFS---GQRLDGLRTTREEILDWIEEGKVASGE---VVLIDARDEDQFHGRLRRAARGGRIAGAVSLPRRRLLHPET---GAILPAEQQREILEEAGVKIADGGNTPK---YVAYCNGGVAATTVLLALHRL-----------------------GIRD---YANYDGSWNEWGNCDDVPIE 377 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1152.1 >prot_C-linearis_contig11.1152.1 ID=prot_C-linearis_contig11.1152.1|Name=mRNA_C-linearis_contig11.1152.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=428bp MRAGGWLVAVATTSCGRRRASDAVSLKAFVYTGSSSSSSSSSSSSSSSSAback to top mRNA from alignment at C-linearis_contig11:105899..113075- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1152.1 ID=mRNA_C-linearis_contig11.1152.1|Name=mRNA_C-linearis_contig11.1152.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7177bp|location=Sequence derived from alignment at C-linearis_contig11:105899..113075- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:105899..113075- >mRNA_C-linearis_contig11.1152.1 ID=mRNA_C-linearis_contig11.1152.1|Name=mRNA_C-linearis_contig11.1152.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at C-linearis_contig11:105899..113075- (Chordaria linearis ClinC8C monoicous)back to top |