mRNA_C-linearis_contig109.1136.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig109.1136.1
Unique NamemRNA_C-linearis_contig109.1136.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: A0A6H5JFU8_9PHAE (Molybdopterin synthase catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU8_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 4.410e-82
Identity = 137/158 (86.71%), Postives = 146/158 (92.41%), Query Frame = 3 
Query:  168 APRKEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARWNVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGGCCRKMVPIE 641
            A R+ED+VSV+ + L+  EI   VADPRAGAISTFSGTTRDNH+GKKVVRLEYEGYVPMAELELKKIC QVR RWNV++IAL HRLGVT VGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGGCCRKMVP+E
Sbjct:    8 AGRQEDHVSVTHSCLQLGEIVEAVADPRAGAISTFSGTTRDNHYGKKVVRLEYEGYVPMAELELKKICAQVRDRWNVLKIALVHRLGVTEVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGGCCRKMVPVE 165
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BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: A0A836CN85_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN85_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.960e-60
Identity = 118/181 (65.19%), Postives = 137/181 (75.69%), Query Frame = 3 
Query:  150 ASSMTVAPRKEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARWNVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGGCCRKMVP----IEAVNVQA-AEGHAQ 677
            +SS   A    D V V+   LE S + A VA P+ GAISTF G TRD H GK VVRLEYEGY PMAE EL+KIC Q R +W++ +IA+AHRLGVTAV EASVIIAVSSVHR++SLEAV++ I+TLKATVPIW LEVYEGDSRVWKENAEW  GGGCCR+MVP    ++  +V A A G AQ
Sbjct:   13 SSSSATATSPHDLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWS-GGGCCRQMVPTNTTVDGTSVAASAAGGAQ 192
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BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: D8LKV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV7_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 4.480e-53
Identity = 94/102 (92.16%), Postives = 98/102 (96.08%), Query Frame = 3 
Query:  300 GKKVVRLEYEGYVPMAELELKKICTQVRARWNVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGP 605
            GKKVVRLEYEGYVPMAELELKKIC QVR RW++++IAL HRLGVT VGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGP
Sbjct:    7 GKKVVRLEYEGYVPMAELELKKICAQVRDRWDILKIALVHRLGVTEVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGP 108
[Close]
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: V9FG54_PHYPR (Molybdopterin synthase catalytic subunit n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FG54_PHYPR)

HSP 1 Score: 184 bits (466), Expect = 6.840e-50
Identity = 102/172 (59.30%), Postives = 119/172 (69.19%), Query Frame = 3 
Query:  150 ASSMTVAPRKEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGG----CC---RKMVPIE 641
            AS  +  P + D+V V   SL+     A+V  P AG ISTF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  VR +W +VV +AL HRLGV  V EASV++AVSS HR+++LEA  FAI+TLKATVPIWK E YEGD+R WKEN EW  G      CC   R MVP+E
Sbjct:    8 ASHFSTEPGRGDFVEVGYESLDNQRAVALVTHPSAGTISTFVGTTRDNFRGKKVVRLEYEGYTPMAVSELRKICVIVREKWPDVVGVALFHRLGVVEVAEASVVVAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDTRTWKENVEWKNGAAARSSCCGSKRVMVPVE 179
[Close]
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: A0A8K1CIT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIT3_PYTOL)

HSP 1 Score: 183 bits (465), Expect = 1.210e-49
Identity = 100/161 (62.11%), Postives = 119/161 (73.91%), Query Frame = 3 
Query:  183 DYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGG----CC---RKMVPIE 641
            DYV ++  +L+       V    AGA+STF GTTRDN  GKKVVRLEYEGY+PMAE EL+KICTQ+R +W +VV IAL HRLGV  V +ASVIIAVSS HR++++EA E+AI+TLKATVPIWK E YEGD+R+WKENAEW  G      CC   R MVP E
Sbjct:   28 DYVEITHDTLDHQCAVERVTHASAGAVSTFIGTTRDNFNGKKVVRLEYEGYIPMAEAELRKICTQIREKWPSVVGIALFHRLGVVEVKQASVIIAVSSPHRREAIEACEYAIDTLKATVPIWKSEQYEGDARMWKENAEWQSGAAARTSCCAPKRVMVPAE 188
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BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: G4YUD6_PHYSP (Molybdopterin synthase catalytic subunit n=3 Tax=Phytophthora TaxID=4783 RepID=G4YUD6_PHYSP)

HSP 1 Score: 182 bits (463), Expect = 1.770e-49
Identity = 100/165 (60.61%), Postives = 116/165 (70.30%), Query Frame = 3 
Query:  171 PRKEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGG----CC---RKMVPIE 641
            P + D+V V  A L+      +V  P AGAISTF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  +R +W  VV +AL HRLGV  V EASVI+AVSS HR+++LEA  FAI+TLKATVPIWK E YEGD+RVWKEN EW  G      CC   R MVP++
Sbjct:   15 PGRGDFVEVGYAPLDNQRAVELVMHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICVTIREKWPEVVGVALFHRLGVVEVAEASVIVAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDTRVWKENVEWKDGAAARSSCCGSKRVMVPVD 179
[Close]
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: A0A3F2RWH3_9STRA (Molybdopterin synthase catalytic subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWH3_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.320e-49
Identity = 99/161 (61.49%), Postives = 113/161 (70.19%), Query Frame = 3 
Query:  183 DYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGG----CC---RKMVPIE 641
            D+V V   SL       +V  P AGAISTF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  +RA+W  VV +AL HRLGV  V EASV++AVSS HR+++LEA  FAI+TLKATVPIWK E YEGD R+WKEN EW  G      CC   R MVP+E
Sbjct:   19 DFVEVGYESLNNQRAVELVTHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICVTIRAKWPEVVGVALFHRLGVVEVAEASVVVAVSSPHRREALEACAFAIDTLKATVPIWKNEQYEGDERMWKENVEWKDGAAARSSCCGSKRAMVPVE 179
[Close]
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: A0A5D6XY12_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY12_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.890e-49
Identity = 101/175 (57.71%), Postives = 117/175 (66.86%), Query Frame = 3 
Query:  183 DYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWG-----------------PGGGCC---RKMVPIEA 644
            D+V ++   L+    AA+V    AGAI+TF GTTRDN  GK+V+RLEYEGY PMA  EL+KIC QVRARW  VV +AL HRLGV  V +ASV++AVSS HR D+L A  FAI+TLKATVPIWK E YEGD+RVWKEN EW                  PGGGCC   R MVP  A
Sbjct:   19 DFVEITREPLDAQRAAALVTHASAGAIATFVGTTRDNFDGKRVLRLEYEGYEPMARAELRKICAQVRARWPGVVGVALFHRLGVVEVAQASVVVAVSSPHRADALHACAFAIDTLKATVPIWKSEQYEGDARVWKENVEWSSGAAARLTGDSAGAAEHPGGGCCAPKRVMVPSSA 193
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BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: A0A662XPF0_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPF0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.550e-49
Identity = 102/163 (62.58%), Postives = 114/163 (69.94%), Query Frame = 3 
Query:  171 PRKEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGG----CC---RKMVP 635
            P + D+V V    L+     A+V  P AGAISTF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  VR +W  VV +AL HRLGV  V EASVIIAVSS HR+++LEA  FAI+TLKATVPIWK E YEGDSR+WKEN EW  G      CC   R MVP
Sbjct:   15 PGRGDFVEVGYEPLDNQRAVALVTHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICATVREKWPGVVGVALFHRLGVVEVAEASVIIAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDSRMWKENVEWEAGAAVRSSCCGNKRVMVP 177
[Close]
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Match: M4BDH5_HYAAE (Molybdopterin synthase catalytic subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDH5_HYAAE)

HSP 1 Score: 180 bits (456), Expect = 1.370e-48
Identity = 99/163 (60.74%), Postives = 116/163 (71.17%), Query Frame = 3 
Query:  177 KEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKKVVRLEYEGYVPMAELELKKICTQVRARW-NVVRIALAHRLGVTAVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGG----CCRK---MVPIE 641
            ++D V V    L+   I  +V D RAGAISTF GTTRDN  GKKVVRL+YEGY PMA  EL+KIC+ +R +W +VVR+AL HRLGV  V EASVI+AVSS HR+++LEA  FAI+ LKATVPIWK E YEGD R+WKEN EW  G      CC K   MVP E
Sbjct:   12 RDDVVEVGYEPLDSQRIVDLVTDARAGAISTFVGTTRDNFQGKKVVRLKYEGYAPMAVSELRKICSAIRDKWPDVVRVALCHRLGVVNVTEASVIVAVSSPHRREALEACAFAIDRLKATVPIWKCEHYEGDERMWKENLEWKGGAAVRASCCSKKRAMVPAE 174
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFU8_9PHAE4.410e-8286.71Molybdopterin synthase catalytic subunit n=1 Tax=E... [more]
A0A836CN85_9STRA1.960e-6065.19Molybdopterin synthase catalytic subunit n=1 Tax=T... [more]
D8LKV7_ECTSI4.480e-5392.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
V9FG54_PHYPR6.840e-5059.30Molybdopterin synthase catalytic subunit n=6 Tax=P... [more]
A0A8K1CIT3_PYTOL1.210e-4962.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4YUD6_PHYSP1.770e-4960.61Molybdopterin synthase catalytic subunit n=3 Tax=P... [more]
A0A3F2RWH3_9STRA3.320e-4961.49Molybdopterin synthase catalytic subunit n=3 Tax=P... [more]
A0A5D6XY12_9STRA3.890e-4957.71Molybdopterin synthase catalytic subunit n=1 Tax=P... [more]
A0A662XPF0_9STRA4.550e-4962.58Molybdopterin synthase catalytic subunit n=1 Tax=N... [more]
M4BDH5_HYAAE1.370e-4860.74Molybdopterin synthase catalytic subunit n=1 Tax=H... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:475664..480753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score189.1
Seed ortholog evalue2.2e-45
Seed eggNOG ortholog2880.D8LKV7
Preferred nameMOCS2
KEGG rclassRC02507
KEGG koko:K03635,ko:K21232
KEGG ReactionR09395
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005671,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006325,GO:0006338,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016573,GO:0016604,GO:0016607,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019008,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0031248,GO:0031974,GO:0031981,GO:0032324,GO:0032991,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051276,GO:0055086,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1902493,GO:1902494,GO:1902562,GO:1990234
EggNOG free text desc.molybdopterin synthase activity
EggNOG OGsCOG0314@1,KOG3307@2759
Ec32 ortholog descriptionmolybdopterin synthase
Ec32 orthologEc-11_005720.1
EC2.8.1.12
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size2748
Cds size663
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927423.0783703-UTR-C-linearis_contig109:475663..4769111622927423.0783703-UTR-C-linearis_contig109:475663..476911Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 475664..476911 -
1690879692.3601098-UTR-C-linearis_contig109:475663..4769111690879692.3601098-UTR-C-linearis_contig109:475663..476911Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 475664..476911 -
1622927423.092758-UTR-C-linearis_contig109:476931..4776101622927423.092758-UTR-C-linearis_contig109:476931..477610Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 476932..477610 -
1690879692.3731449-UTR-C-linearis_contig109:476931..4776101690879692.3731449-UTR-C-linearis_contig109:476931..477610Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 476932..477610 -
1622927423.1596198-UTR-C-linearis_contig109:480595..4807531622927423.1596198-UTR-C-linearis_contig109:480595..480753Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 480596..480753 -
1690879692.4187-UTR-C-linearis_contig109:480595..4807531690879692.4187-UTR-C-linearis_contig109:480595..480753Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 480596..480753 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927423.1039152-CDS-C-linearis_contig109:477610..4778801622927423.1039152-CDS-C-linearis_contig109:477610..477880Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 477611..477880 -
1690879692.3809903-CDS-C-linearis_contig109:477610..4778801690879692.3809903-CDS-C-linearis_contig109:477610..477880Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 477611..477880 -
1622927423.1171572-CDS-C-linearis_contig109:478485..4786591622927423.1171572-CDS-C-linearis_contig109:478485..478659Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 478486..478659 -
1690879692.3889298-CDS-C-linearis_contig109:478485..4786591690879692.3889298-CDS-C-linearis_contig109:478485..478659Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 478486..478659 -
1622927423.1330214-CDS-C-linearis_contig109:479081..4791581622927423.1330214-CDS-C-linearis_contig109:479081..479158Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 479082..479158 -
1690879692.3985462-CDS-C-linearis_contig109:479081..4791581690879692.3985462-CDS-C-linearis_contig109:479081..479158Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 479082..479158 -
1622927423.1480966-CDS-C-linearis_contig109:480453..4805951622927423.1480966-CDS-C-linearis_contig109:480453..480595Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 480454..480595 -
1690879692.4096704-CDS-C-linearis_contig109:480453..4805951690879692.4096704-CDS-C-linearis_contig109:480453..480595Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 480454..480595 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1136.1prot_C-linearis_contig109.1136.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig109 477611..480595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig109.1136.1

>prot_C-linearis_contig109.1136.1 ID=prot_C-linearis_contig109.1136.1|Name=mRNA_C-linearis_contig109.1136.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=221bp
MTVAPRKEDYVSVSTASLEPSEIAAMVADPRAGAISTFSGTTRDNHFGKK
VVRLEYEGYVPMAELELKKICTQVRARWNVVRIALAHRLGVTAVGEASVI
IAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPG
GGCCRKMVPIEAVNVQAAEGHAQVGTSRTSSASSASSASSSATASSANHS
ANHSGGGGGDSGSGCCDSHA*
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mRNA from alignment at C-linearis_contig109:475664..480753-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig109.1136.1 ID=mRNA_C-linearis_contig109.1136.1|Name=mRNA_C-linearis_contig109.1136.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5090bp|location=Sequence derived from alignment at C-linearis_contig109:475664..480753- (Chordaria linearis ClinC8C monoicous)
CCCACCTCGCCTTTTGCTCCGCCTTTCCTCTCCCTCCCAAAACCTGGTGC
CCCAAACCTCTCCTGACACCCACACACACAACCCAATCTAGATACCCGCG
GACTTCTGGTGTGGTCTTGAGAACCAAGCCTAGGAGCCACCACAGAGCAG
CAAGCAGCATGACTGTCGCACCGAGGAAGGAGGACTATGTCTCCGTATCA
ACGGCCTCCCTCGAGCCTAGCGAGATAGCCGCCATGGTGGCCGACCCTCG
CGCGGGAGCCATCTCCACCTTCTCAGGAACTACCAGGGACAACCACTTCG
GTGAGAGCCCACACAGGGCAGAGGGGGCGGCGATAGAAAGAGGGCCACGC
TTGCGGTTCTTGGCGTGGAGCGTGGAGTTGGCTGGGCAGGTCTCGAACCT
GTTCCACGCTGACCGCAGGCGTAGTCTAAGCAGTCGGAATGGAGGTGTTT
GTCGTGCTCTTTTCTCCCCGCTCCGACACATTCAACCAAGCTCATGTTGG
CAGACAAAGAGAGCTCGGCAGCAGCTCTTCTCGCGTGTCGATCGGGGCTT
ACCGTGTCGTTCCGGGTGTGTTCCTAATTCATGTGTTAATGCGTCTGCGT
CTCTGAGAGTCTGTTTTTCTCAAAATTTTGAAAGGGGCAGATGAGGGGTA
TGGATATTCTGCGGGTATTCTAAAAAAATAACAGCTTGTAGATATCATCG
CAAGAGGCATGACGATGTCGCCGTGATCACGCGCCGCGCGGGCCTTGACC
CCCCATCACTATAATTCATCGACTATCGGGTAGATAGACCTGCATGGCAG
AAGCCGTAAGTTGCAGCGCGTGTTTAGACACAATGGTCGGAGAATTATGA
CATGCGTGGGCCTTTTTTTTTTTTTTTTAAATCTGTTCTCTACTGCTGCG
TACAGAATTCCATCCCTTTATTACATGATTGTTTGTTTGTGTTGTTCGTT
CAACAATTGGAGCTTCAAACTTCACGAAATTGCAAAAATACGTCTTCTGG
GGTCTGCGTGGTACATTCGATAGACAGCACAACGAACATGTTTGTTACAT
CTGTCTCGTTGAAATAATGCGGTTCAATCAGCAGCTCTCGCGCTCCTACA
CTTTCTGGTTGGCCACGGGGGCCTCCATGTCATTTTGTGAGAGTTGAGCA
AGGGGGAGCAGCGGCAGGAAAGCTCTCGTCTTTGTTTGTCTGTACTATGT
ATGTATATTTTTCGCTTTCGGGCAACAGGTGTCATCGACAGCTGACGCGA
TCCTATATACAGCACCAACAATATCGAACAAATTACAAGAATGCTCTTCG
ACTGCTGTGTTGTACATGCCATACCCCGGCCCCGTTTTATCCTAGAACAA
CCTAAACAAGGGCATCAGCAGAAGCAAGGCCCTAGTGTCTCCAGGCACGG
TCAAGGAAAGAGCCTCTCGGCGTCATCTGAGCTGAGCCCGGCCGGTGGTC
TGCTAGGTTGATTAACTCAGAAGACAAAAGACAGAAGACAGAGGCAGGGA
AAACCGTTCGTTAACCGCCCCCCCCCTTCTTCTTTTTTCCGTGCAAAAAC
ACGCTTCGCGCGACTCTGATACAAATTCTGACAATGCGTTTCCAGGGAAG
AAGGTCGTGCGGCTGGAATACGAGGGCTATGTGCCGATGGCGGAGCTAGA
GCTCAAGAAAATATGCACCCAGGTTTGTGTTTTTTGTTTTCGATCATATG
ATACCGCTCTCTTGCTGCTTCGTGTCCCTTGCCTGTCCCTTGCCTGTTGC
CGGTGAAATATTTTTGTTGTTGTAGAATAAGGAACATTAACATTTTCGCA
TGAGGAAACGCACCAAAGGGTCGTGACGGCTGAATGGCAAGCAGCAAGAC
CAGCAGGTTTCTTCCCTCCTCGCCTTTTTTTCCGTCCTTGTCTCTCTCTC
TCTCGCTTTCAAAACTACGCCCCCCCCCGCGGAGGACGGGGAAGCGCATG
TTGTACTGTCACGCCCTCCCACCCACCCGATTTCCCTACCGTTTCCCCCT
GCCCACTTGTCCTTCCCGCATGCTGGGCCGTCTCCCTCCCCATTATTCCT
TTCCGCTCACGCACGCACATGCTCTCTTGGACGCGCTCGAGCAGGTTCGG
GCTAGGTGGAACGTTGTACGCATCGCCCTGGCGCACCGGCTCGGGGTGAC
GGCGGTCGGGGAGGCGAGCGTGATCATCGCGGTGTCGTCGGTGCACCGAA
AGGATTCGCTCGAGGCGGTCGAGTTCGCGATCAACACCCTTAAGGCCACT
GTGCCCATCTGGAAGCTTGTGAGTGATTTTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCAGCTGCTGTGTTTTG
TTTTGAAGACCCACGCAAGGCGCACGAGGTTTGTTCTTTTTTCTTGATGT
TTTTTTAGTTGAACTGTTGGACTTCCATTTATTTCGTGCCCGATCGTAAA
CAGCAGCCAGCACCGTGGTCCCACACGGCCCCGAAAACCGAAAACCCTCA
GGGAGCCATAGCCCTGTTTTTTTTTTTTTTTTGCTCGGCGCCGACAGCAG
TGAGGAAGGGTTGGAGTAGACGTCAACGATGGAGGAGGCTGACGGAAGAA
AATGCCCCTGTAATTGCTTCCGGAGAGTACCGATGGGGGGCGGCACTGCT
GTAGGAGCGGTGCAGTCCAGGCCTGCGTCCAAAACGTATGTATGTACCGC
GGGCCGCGCTACCTTCTGTATGTTTCGCTTTCCGTGGGGTATATACTAAA
GCTCTCTCGTGTTTCGATACCTCCCCGTCGATTCGCGTCGTCTTTGCTAT
TCTGGCTGACCCCCCTTTTCCCGATCGATAACCTGCACTCGGTGGACATG
GTTGAACGCCTGATGCGTAACAGGAGGTGTACGAGGGGGACAGCCGAGTG
TGGAAGGAGAACGCGGAGTGGGGGCCCGGGGGCGGATGCTGCCGGAAGAT
GGTCCCGATAGAGGCGGTCAACGTGCAGGCGGCGGAAGGGCATGCTCAAG
TCGGCACCAGCAGGACCAGCAGCGCCAGCAGCGCCAGCAGCGCCAGCAGC
AGCGCCACGGCAAGCAGCGCCAACCACAGCGCCAACCACAGCGGCGGTGG
CGGCGGCGACAGCGGAAGCGGGTGCTGCGACTCCCACGCTTGAAAACATT
TTCCCGGCGCGAGTCCTTTTCTCTGTTGGCTCCATTTCTCGTGTTGTATC
AATACATTCCACACTCTATGACGATATGCACACAGTCTGCACTGTACTTC
GTGGTGTGCAGATGGATGCTTGTTCTTTTCTTCGTGTTCTGTTTTTTTTC
ATGTGAAGTAAGTTGATCTCTCATGTTTTGCTTTTAGGATTTCGTGTTGG
TGGTGTTACACTTTTTTTCCCGTTTTTTTTCGTTAGTTCGCCTTTTTTTA
TGTTTTATTTTTTTTATTGTCTTGCTGCCTCGTCAGTCTCAGCTTGCTGG
TTCCTTCTTTCAGTGTGTGTGAGCGCGCTCCATCCCTGTGCCTGTCGAAA
ATGATGCAGATAGACCGAAAGATGGACCGTTTGCCTCGGTTCAAGGCTCT
AGTGTAGCTCGGGTCGCGACGACGATCGCGTCGGTTCGCGAGGGTGGGCT
GGTCTATGGCGTCCTTCTCAGGCTTTCCCCCTACCCCAGTCTCCCGAGAG
GAATGCCAGACGAGGAATCGATTTCAGTAGATTGCTCTTGGTCACAAGAA
TACCCCCTACTCATGCTCCATCCAACTCTCCGACCAGACGGCTATTTTGG
CCGGTGTATGTTGCAACGGAGAGGGAGAGGCACCGGGGCCCCGGCGTCTG
GGAGGCTGAGGGGGGGGGGGGAGCGAGCAGAAACAGCGTTAGCAGCTTTA
GTTCGACCCCGGCAAGCTGTCCTAGTCCTTGATGAATATTCTGTTCTTGG
GTTCGACGTTTCGTTTTAGGTGTGTATGTAAGGGTGCTGTGTGTCTAGTT
TTTTACTTGGATGGTGCGTTCTCGGTTCGAATTCGAACATTTTGCGTGGT
TTCCCGGCAAGGAGCGGGAGGTGGTCGGGCCTATCGGGCATATCGACGGT
ATCTGCGTAGCGTAGAAGAGAGCGACGCGGGGGAGCGGGGGCGCAGCCAG
CCTATTTTGTGTGGTGTACGTGGCGAGCGGTGTCGGGTTCGGGGGTTTGG
TGGGTTCAAGACAGACACACAGGAATCGGACGGTTGTCAGATCCGACGGA
TAGATTGACCCATGATCGGGTTGTTGTTGTTGTTGTTTTTGTTGTTGAGT
TTTTTCTTTCTTTTGGTCTCCCTATGCTTTCGTTCGATCTCGGATGCTGG
CACGATTGCTTCTGTAGATCGGACAAGCGACGTTGGTCCCCCCCCCCTTC
CCATCGCTCGCGTGCACGCTCCATCTTTTTTGGTATGCGAAGCCCATGTC
CCAAAGGCTGAAACGCTAGCATAGTGAGTGACCCCCCCCTTCTCCAAAGG
CCCCATGTTTTATTAAGGTTTTGAATGTTGGGTGTTCCGAGAATTTTTAA
AAATCAGAATCAAATTAGCTTACGCGTGTGGTGGGCAAGAGATGTGTGCG
GGGAAACAGTTGGCCAGGAATTGGGCGAGAAAAAAGTGTAGCGCGTGTGT
TGTCGGGCTTTTTATTCGCGGAAGCAGCCGGTCTTGAAGTTCGATCGATT
TTCGCGAGCGACCTTGTTGCCTCTGGATGTGTCGCTTGTGCGGCAACTAC
CTGTGCGCTGGGCGCGGGATCGTAGAAGGAACTGCACGTCTGTGCTGCAA
AGTTGCGCTGTAGCGCGGGGTACATTCGTGGACCACGTTCAAGAAACGAC
TGATGGGTGTGCGGTCGCCGTAGGGAGGGCGTGCACCTTGTCATGCCGAG
CTCCGACGGTAGATGTTGAAAGCCTTTTATGAACACGTCAATGTTGCGCT
ATTTATAGTGGTGAAAGTGCTGGCATGGTAGAAGTGTTGGCATTGGTTGT
GTAGAAAGATGGGTATTAAGCAGCAGTAGCAGTAGCAGCGGCAAAAGAGC
TGCGCAGCAAGTACCTGGCAAGGCCTCTCTGGCTGGAAGATGAAACAAAA
TAGCAGGTTATGACAAGTGTGGGCAGGAACGAGGGCAACA
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Coding sequence (CDS) from alignment at C-linearis_contig109:475664..480753-

>mRNA_C-linearis_contig109.1136.1 ID=mRNA_C-linearis_contig109.1136.1|Name=mRNA_C-linearis_contig109.1136.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1326bp|location=Sequence derived from alignment at C-linearis_contig109:475664..480753- (Chordaria linearis ClinC8C monoicous)
ATGACTGTCGCACCGAGGAAGGAGGACTATGTCTCCGTATCAACGGCCTC
CCTCGAGCCTAGCGAGATAGCCGCCATGGTGGCCGACCCTCGCGCGGGAG
CCATCTCCACCTTCTCAGGAACTACCAGGGACAACCACTTCGATGACTGT
CGCACCGAGGAAGGAGGACTATGTCTCCGTATCAACGGCCTCCCTCGAGC
CTAGCGAGATAGCCGCCATGGTGGCCGACCCTCGCGCGGGAGCCATCTCC
ACCTTCTCAGGAACTACCAGGGACAACCACTTCGGGAAGAAGGTCGTGCG
GCTGGAATACGAGGGCTATGTGCCGATGGCGGAGCTAGAGCTCAAGAAAA
TATGCACCCAGGGAAGAAGGTCGTGCGGCTGGAATACGAGGGCTATGTGC
CGATGGCGGAGCTAGAGCTCAAGAAAATATGCACCCAGGTTCGGGCTAGG
TGGAACGTTGTACGCATCGCCCTGGCGCACCGGCTCGGGGTGACGGCGGT
CGGGGAGGCGAGCGTGATCATCGCGGTGTCGTCGGTGCACCGAAAGGATT
CGCTCGAGGCGGTCGAGTTCGCGATCAACACCCTTAAGGCCACTGTGCCC
ATCTGGAAGCTTGTTCGGGCTAGGTGGAACGTTGTACGCATCGCCCTGGC
GCACCGGCTCGGGGTGACGGCGGTCGGGGAGGCGAGCGTGATCATCGCGG
TGTCGTCGGTGCACCGAAAGGATTCGCTCGAGGCGGTCGAGTTCGCGATC
AACACCCTTAAGGCCACTGTGCCCATCTGGAAGCTTGAGGTGTACGAGGG
GGACAGCCGAGTGTGGAAGGAGAACGCGGAGTGGGGGCCCGGGGGCGGAT
GCTGCCGGAAGATGGTCCCGATAGAGGCGGTCAACGTGCAGGCGGCGGAA
GGGCATGCTCAAGTCGGCACCAGCAGGACCAGCAGCGCCAGCAGCGCCAG
CAGCGCCAGCAGCAGCGCCACGGCAAGCAGCGCCAACCACAGCGCCAACC
ACAGCGGCGGTGGCGGCGGCGACAGCGGAAGCGGGTGCTGCGACTCCCAC
GCTTGAGAGGTGTACGAGGGGGACAGCCGAGTGTGGAAGGAGAACGCGGA
GTGGGGGCCCGGGGGCGGATGCTGCCGGAAGATGGTCCCGATAGAGGCGG
TCAACGTGCAGGCGGCGGAAGGGCATGCTCAAGTCGGCACCAGCAGGACC
AGCAGCGCCAGCAGCGCCAGCAGCGCCAGCAGCAGCGCCACGGCAAGCAG
CGCCAACCACAGCGCCAACCACAGCGGCGGTGGCGGCGGCGACAGCGGAA
GCGGGTGCTGCGACTCCCACGCTTGA
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