mRNA_C-linearis_contig109.1122.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.020e-62 Identity = 279/457 (61.05%), Postives = 308/457 (67.40%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWLDRAPNDNEGR-CSPEEVERVRLLLARAPADRAWRRRCWLVMLLS--RASKARTEGRDDGGTSGNTSDINAVDARW 1527
MH++P+R LQ + +EI+KLVSYSATP+QW EWLR+PLEHA ARGNL LV++LL AGADG AGWRGCRGRTL+DAAA+GG+ VV+ LL AGA+ DVNVVS+S KRSALY AT GHE+ ARRL+ AGADV F DPV+G VLH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L +AC + GLE VDLLLRWGADETAL+ G TPA LD N+N+ CS E+ RVR+LLARAPADRAWRRRCWLVML S R +KA T+ D N +A D W
Sbjct: 1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGADVTIRDNCDHSALDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSEGGSLAPPLFSATDPRNLKAMHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSFARTAKATTDETGDAHEGSN----DAGDKEW 453
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 223 bits (568), Expect = 1.080e-61 Identity = 267/471 (56.69%), Postives = 301/471 (63.91%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWLDRAPNDNEGRCSPEEVERVRLLLARAPADRAWRRRCWLVMLLSRASKARTEGRDDGGTSGNTSDINAVDARWEPTCPSAGSRGVELDGGG 1581
MH++P+R Q +G+EI+KLVS+SATP+QW EWLRVPLEHA ARGNL LVN+LL+AGADG AGW+GCRGRTL+DAAA+GG+ VV+ALL AGA+PDVNVVS+S KRS+LY AT GH++ ARRLI AGADV F DP C G XXXXXXXXXXXXXXX R V++ + N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L AC + G+E VDLLL+WGADETA+ G TPA WL N+N CS E+ RVRLLLARAPA+RAWRRRCWLVML S A AR G ++D+ R + C A E GGG
Sbjct: 1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDPTGSIL----GCLGNGGVTPQIYACGSGXXXXXXXXXXXXXXXTI--------------RDVDRHSALDNAVCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGTTP----------------------------------------LHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARATTDKTGDADEGSNDVGD---RKDGKCKGARRENGESAGGG 410
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 199 bits (507), Expect = 3.270e-52 Identity = 151/454 (33.26%), Postives = 181/454 (39.87%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWL----------DRAPNDNEGRCS----------PEEVERVRLLLARAPADRAWRRRCWLVMLLSRASKAR 1458
MHL+P+RA L+ EIFKL+ + ATPEQWAEWLR PLEHA ARGNLGLV LL AGA+G AGWRGCRGRT+LDAAA+GGN DVV LL +G DVNVVS+S +RSAL+VA+ GHE A++LI AGADV VDP C LH A G + DA D G L + C G++ VDLLLRWGA ETA++K GLTP+ L D + + RC +E++R R+LLARAPADR WRRRCWLVML +RA + R
Sbjct: 1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGR 454
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 192 bits (489), Expect = 4.400e-52 Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYG 615
MH+FP+R L LG+E+FKLVSY A+ EQWAEWLRVPLEHA +RGN LV LLQAGAD AGWRGCRGRTLLDAAA+GGNADV++AL+ GA DVN V++S +RSAL+ AT GHE A+RL+ GADV F DPV C+VL +A G
Sbjct: 1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQG 149
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.470e-51 Identity = 189/495 (38.18%), Postives = 226/495 (45.66%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWLDRAPNDNEGRCSP------EEVERVRLLLARAPADRAWRRRCWLVMLLSRASKARTEGRDDGGTSGNTSDINAVDARWEPTCPSAGSRGV-ELDGGGQGCGISDGEAG 1614
MHL P+RA L+E EIFKL+S+ ATPE+WAEWLR P EHA ARGN+GLV LL+AGADG AGWRGCR RT+LDAAA+GGNADVVT LL + PDVNVVS+S KRSAL++A + HE AR L+ AGAD VDPV T H A G + DA D +G XXXXXXXXXXXXXXXXXXXXXXXXXXX L AC RPG++ AV LLLRW A ALD +G TP+ L+ A G + EE++R +LLARAPADR WRRRCWL ML +RA + R + T + ++ A+D + GS+ V + D GG G G DG+ G
Sbjct: 1 MHLDPKRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNGHRSTVEVLLRAGADTTRRATDSGDFSHMAALDVAAAQGHVRVVKAILGNGGDASAVDDHGCTALHYAALHKHGGEVVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAMVTLVKRGGNVNENTSNGVSVLHWACAIPRPGVDRAVGLLLRWEAFAAALDSRGETPSNHLELAAALFAGTSAAPRNSVREEIQRALVLLARAPADRTWRRRCWLAMLRARAGREREACSSNSSTGNDRTE--AIDRKLVGHDEDDGSKEVGKTDAGGSGSGPMDGKKG 493
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE) HSP 1 Score: 181 bits (459), Expect = 2.890e-49 Identity = 102/182 (56.04%), Postives = 120/182 (65.93%), Query Frame = 1
Query: 43 VGARAQEHTSVALERSP*TFSSFYAYDEKPS*RRQACTQKR---RMHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPV 579
+G R E+ A + TF F K S + CT + H++P+R L+ L EIFKLVSYSATPEQW EWL+VPLE A A GN L LL+AGA G AGWRGCR R+L+DAAAVGGN DVV+ LEAGA PDV VVS S K SAL +GHE+VARRL+ AGADV FVDP+
Sbjct: 1 MGVRGVENLPAAASHT--TFLQFPKNPAKTSLNQSRCTSDHTDTKTHIYPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNFVDPM 180
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 181 bits (458), Expect = 1.960e-46 Identity = 231/431 (53.60%), Postives = 256/431 (59.40%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWLDRAPNDNEGR-CSPEEVERVRLLLARAPADRAWRRRCWLVMLLSRASKAR 1458
M ++P+R LQ + +EI+KLVSYSATP+QW EWLRVPL+HA ARGNL LVN+LL+AGADG AGW+ GA+PDVNV+S+S KRSALY AT GHE+ ARRLI AGADV F DPV+ VL+EA G G N G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L AC + G+E VDLLLRWGADETALD TPA LD N+N+ CS E+E+VRLL+ARAPA+RAWRRRCWLVML S A AR
Sbjct: 1 MRVYPERVLLQGMESEIWKLVSYSATPQQWKEWLRVPLKHAAARGNLNLVNSLLEAGADGSAGWK--------------------------GAQPDVNVLSVSSKRSALYTATVCGHEDAARRLITAGADVNFDDPVHCSHVLYEAILGGHTQLLTLSCESGHLSVVNTLLTA----------------------GANVTIRSIGGYSALDKAVFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTP---------------------------------LHWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTAR 350
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 178 bits (451), Expect = 2.410e-45 Identity = 154/441 (34.92%), Postives = 183/441 (41.50%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIACCGKRPGL-EVAVDLLLRWGADETALDKKGLTPAVWLDRA----------PNDNEGRCSPEEVERVRLLLARAPADRAWRRRCWLVMLLSRASKAR 1458
MHL+P+RA L+ EIFKL+S+ ATPEQWA+WLR PLEHA ARGN+GLV LL+AGADGRAGWRGCRGRT+LDAA +G PDVNVVS+S KRSAL++A GHE AR L+ AGA++ VDP C H A G + +A D + XXXXXXXXXXXX L AC G G AVDLLLRWGA ETALD +G TP+ +L R P ++E E++R +LLARAPADRAWRRRCWLVML +RA + R
Sbjct: 1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNLLIGGACPNSRTRFGRTPLHVAAAVGNSRVVSTLLGDTSTSINARDND---------------------------------LHSPLMLASANGHRSTVEALLRAGADTTLRCYSGGVSDMAALEMAGGEVVDVXXXXXXXXXXXXAGGSIPLHASAVHGHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKM--QREMQRALVLLARAPADRAWRRRCWLVMLRARAGRER 406
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 179 bits (455), Expect = 2.620e-45 Identity = 176/428 (41.12%), Postives = 198/428 (46.26%), Query Frame = 1
Query: 175 LFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWLDRAPNDNEGRCSPEEVERVRLLLARAPADRAWRRRCWLVMLLSRASKAR 1458
++P+R L+ IF L+SY ATPEQW EWLR PLEHA ARG LV LL AGADG AGW GCRGRTLLDAAA+GGN DVVT LL AG PDVNVVS+S +RSAL+++ GHE AR+LI AGAD VDP XXXXXXXXXXXXXXX +KD D++G XXXXXXXXXXXXXXXXXXXXXXX L +AC PG + VDLLLRWG E LDK G TPA L A + + EVER +LLA APADRAWRRR WLVML +R + R
Sbjct: 1 MYPRRPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDKTM--LHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKA--REVERAHVLLANAPADRAWRRRSWLVMLRARTERER 424
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.510e-44 Identity = 162/430 (37.67%), Postives = 188/430 (43.72%), Query Frame = 1
Query: 169 MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVNTLLQAGADGRAGWRGCRGRTLLDAAAVGGNADVVTALLEAGARPDVNVVSMSPKRSALYVATDYGHEEVARRLIEAGADVTFVDPVYGCTVLHEACYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRR-----GVNKDAPDQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIACCGKRPGLEVAVDLLLRWGADETALDKKGLTPAVWLDRAPNDNEGRCSPEEVERVRLLLARAPADRAWRRRCWLVMLLSR 1443
MH+FP+R L LG+E+FKLVSY A+ EQWAEWLRV LEHA +RGNL LV LL+AGAD +GWRGCR RTLLDAA A DVN V++S +RSALY AT GHE A+RLI AG+DV F DPV C+VL +A G + G+ K + XXXXXXXXXXXXXXXXXXXXXXX L AC +R GL ++DLLLRWGADETA +K+G TP L DN CSP+EV+R RLLL RAP DR WRRR WLV+L SR
Sbjct: 1 MHIFPERTSLDGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTVSSRRSALYTATCCGHEAAAKRLILAGSDVNFRDPVAKCSVLSQAIQGSHTQFVDDLLIGGARPNIRDDCGMAPLQAAALFAEEGVVSALLLAKADVNVGLGKTMYETP-LMLAVRRGHLAIVETLLEAGADCSLRQLEDYSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNP-HCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSR 428 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig109.1122.1 >prot_C-linearis_contig109.1122.1 ID=prot_C-linearis_contig109.1122.1|Name=mRNA_C-linearis_contig109.1122.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=527bp MHLFPQRAPLQELGNEIFKLVSYSATPEQWAEWLRVPLEHAVARGNLGLVback to top mRNA from alignment at C-linearis_contig109:350270..352923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig109.1122.1 ID=mRNA_C-linearis_contig109.1122.1|Name=mRNA_C-linearis_contig109.1122.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2654bp|location=Sequence derived from alignment at C-linearis_contig109:350270..352923+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig109:350270..352923+ >mRNA_C-linearis_contig109.1122.1 ID=mRNA_C-linearis_contig109.1122.1|Name=mRNA_C-linearis_contig109.1122.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3162bp|location=Sequence derived from alignment at C-linearis_contig109:350270..352923+ (Chordaria linearis ClinC8C monoicous)back to top |