mRNA_C-linearis_contig109.1118.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig109.1118.1
Unique NamemRNA_C-linearis_contig109.1118.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 9.080e-116
Identity = 186/244 (76.23%), Postives = 203/244 (83.20%), Query Frame = 1 
Query:    1 QYDGEEHVTYEGDGGLEDSSYAENDGAAAGATPSKRRKKR------AYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVWKDGGADALADHMAARGDADAAAAKYEEEEAEGVDRT 714
            QY+GEEHV Y+GDGGL+   Y  +DG+                   AYKKAPDAPRRGRSAYVLFSMEARE VKN LPEGSKVTEVMKGIAA+WREL E +K EWTAKAA DKDRYEQEL++YDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMS+EEK PY+TKA+DDT+RYR+AM VWKDGGADALA HMAARG+ D A  KYEE+  +G DRT
Sbjct:    2 QYEGEEHVAYDGDGGLDQGHY--DDGSEGXXXXXXXXXXXXXXXXXAYKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGGADALASHMAARGETDGAVGKYEED-GDGGDRT 242
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BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.120e-52
Identity = 88/167 (52.69%), Postives = 123/167 (73.65%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            +++KR  KKAP AP+RG+S Y+LFSM+ RE +K+ +P  +KVT+VM+ IA  W ++ E EK  W + A +DK RYE+E+A YDGPL+VPNKRAKKDP APKRA SAFL +SQ MRP+L++  P+ KN D+SK LG+ W++ ++ +K PY  K  +D  RY++ M  W
Sbjct:   24 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190
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BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: A0A7S2UYP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYP1_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.490e-51
Identity = 87/168 (51.79%), Postives = 124/168 (73.81%), Query Frame = 1 
Query:  103 KRRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            K+++KR++KKAP AP+R RS Y+LF+ E R  VK  L E  KVT+VMK +AA WR+L E  + E+ AKA +D+ R+++E+++Y+GPLK+PN+RAKK+P APKRAMSAFLHFS   RP+L+E  P+  ++ +SK+LG  WN + +E K+PY  K+  D  RYR  +A W
Sbjct:   17 KKKRKRSHKKAPGAPKRARSPYILFASEKRAEVKARLGENCKVTDVMKAVAALWRQLDEEGRKEFVAKAEMDRARFQEEMSIYEGPLKIPNRRAKKNPNAPKRAMSAFLHFSIEYRPKLKEQNPQLTHLQISKLLGDTWNALPQETKDPYVEKSRIDNQRYRAEIATW 184
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BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: A0A835ZA26_9STRA (High mobility group box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA26_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.020e-50
Identity = 98/181 (54.14%), Postives = 125/181 (69.06%), Query Frame = 1 
Query:  109 RKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRA---------------------KKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYR 588
            ++KR +KKAP AP R RSAYVLFS+  R+ VK GLPEGSKVTE+M+ +AA WRE+ E +++EW AKAA DK RY+ EL  Y GPLK+PNKRA                     KKDP APKR MSAFL++SQ MRPRL+E YP+AK  D+SK+LG++W RM  ++K+ Y TKA  +   Y+
Sbjct:  103 KRKRLFKKAPGAPTRARSAYVLFSLSKRQEVKAGLPEGSKVTEIMRRVAALWREMTEDQRSEWHAKAAEDKQRYQDELTTYQGPLKIPNKRAHKAMFEQPQPAYEANGRAKRAKKDPRAPKRPMSAFLYYSQVMRPRLKEQYPDAKAQDVSKILGEQWARMGPDDKKVYNTKAEHEIAIYK 283
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BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE)

HSP 1 Score: 174 bits (440), Expect = 4.220e-50
Identity = 87/167 (52.10%), Postives = 119/167 (71.26%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            +++KR  KKAP AP+RG+S Y+LFSME RE +K  +PE SKVT+VM+ IA  W ++G+ +K  W   A  DK RYE+E+A YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++E+K P+  K   D  RY++ M  W
Sbjct:   53 KKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREMEEW 219
[Close]
BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC)

HSP 1 Score: 171 bits (434), Expect = 1.320e-49
Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            ++K+R  KKAP AP+RG+S Y+LFSM+ RE +K  +P  SKVT+VM+ IA  W ++ E EKA W   A  DK RYE+E+A YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++ +K P+  K  +D  RY++ M  W
Sbjct:   20 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 186
[Close]
BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD)

HSP 1 Score: 171 bits (433), Expect = 1.870e-49
Identity = 85/167 (50.90%), Postives = 120/167 (71.86%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            +++KR  KKAP AP+RG+S Y+LFSM+ RE +K  +PE +KVT+VM+ IA  W ++ + +K  W A A  DK RYE+E+A YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W++ ++E+K P+  K   D  RY++ M  W
Sbjct:   21 KKRKRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREMEEW 187
[Close]
BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.360e-49
Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            +++KR  KKAP AP+RG+S Y+LFSME RE +K  +PE SKVT+VM+ IA  W ++ + +K  W   A  DK RYE+E+A YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++E+K P+  K   D  RY++ M  W
Sbjct:   24 KKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREMEEW 190
[Close]
BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: A0A024U6C4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6C4_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.120e-48
Identity = 85/167 (50.90%), Postives = 117/167 (70.06%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            ++K+R  KKAP AP+RG+S Y+LFSM+ RE +K  +   +KVT+VM+ IA  W ++ E EKA W   A  DK RYE+E+A YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + E KN ++SK LG+ W + ++ +K P+  K  +D  RY++ M  W
Sbjct:   24 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREMEEW 190
[Close]
BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.130e-48
Identity = 85/167 (50.90%), Postives = 119/167 (71.26%), Query Frame = 1 
Query:  106 RRKKRAYKKAPDAPRRGRSAYVLFSMEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRYEQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVW 606
            +++KR  KKAP AP+RG+S Y+LFSM+ RE +K  +P+ SKVT+VM+ IA  W ++ + +K  W A A  DK RYE+E+A YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++E+K P+  K   D  RY++ M  W
Sbjct:   46 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREMEEW 212
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV0_ECTSI9.080e-11676.23High mobility group protein n=2 Tax=Ectocarpus Tax... [more]
F0W3U4_9STRA2.120e-5252.69High mobility group protein putative n=2 Tax=Albug... [more]
A0A7S2UYP1_9STRA2.490e-5151.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZA26_9STRA2.020e-5054.14High mobility group box domain-containing protein ... [more]
M4BDC0_HYAAE4.220e-5052.10Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
A0A067C9M6_SAPPC1.320e-4951.50Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
K3WVY6_GLOUD1.870e-4950.90Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7KJP5_9STRA3.360e-4951.50Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A024U6C4_9STRA1.120e-4850.90Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A5D6YAG9_9STRA1.130e-4850.90Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:323277..329071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score291.6
Seed ortholog evalue2.5e-76
Seed eggNOG ortholog2880.D8LKV0
KEGG koko:K09273
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA binding
EggNOG OGsCOG5648@1,KOG0381@2759
Ec32 ortholog descriptionHigh mobility group domain protein
Ec32 orthologEc-11_005660.1
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03021
Exons5
Model size761
Cds size537
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927419.499106-UTR-C-linearis_contig109:323276..3233201622927419.499106-UTR-C-linearis_contig109:323276..323320Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 323277..323320 -
1690879691.0303133-UTR-C-linearis_contig109:323276..3233201690879691.0303133-UTR-C-linearis_contig109:323276..323320Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 323277..323320 -
1622927419.5769322-UTR-C-linearis_contig109:328891..3290711622927419.5769322-UTR-C-linearis_contig109:328891..329071Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 328892..329071 -
1690879691.0850313-UTR-C-linearis_contig109:328891..3290711690879691.0850313-UTR-C-linearis_contig109:328891..329071Chordaria linearis ClinC8C monoicousUTRC-linearis_contig109 328892..329071 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927419.511841-CDS-C-linearis_contig109:323320..3234151622927419.511841-CDS-C-linearis_contig109:323320..323415Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 323321..323415 -
1690879691.0405536-CDS-C-linearis_contig109:323320..3234151690879691.0405536-CDS-C-linearis_contig109:323320..323415Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 323321..323415 -
1622927419.5255275-CDS-C-linearis_contig109:323986..3240951622927419.5255275-CDS-C-linearis_contig109:323986..324095Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 323987..324095 -
1690879691.0485616-CDS-C-linearis_contig109:323986..3240951690879691.0485616-CDS-C-linearis_contig109:323986..324095Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 323987..324095 -
1622927419.5409582-CDS-C-linearis_contig109:325974..3261611622927419.5409582-CDS-C-linearis_contig109:325974..326161Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 325975..326161 -
1690879691.0589015-CDS-C-linearis_contig109:325974..3261611690879691.0589015-CDS-C-linearis_contig109:325974..326161Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 325975..326161 -
1622927419.5540037-CDS-C-linearis_contig109:327522..3276211622927419.5540037-CDS-C-linearis_contig109:327522..327621Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..327621 -
1690879691.0673583-CDS-C-linearis_contig109:327522..3276211690879691.0673583-CDS-C-linearis_contig109:327522..327621Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..327621 -
1622927419.5669312-CDS-C-linearis_contig109:328844..3288911622927419.5669312-CDS-C-linearis_contig109:328844..328891Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 328845..328891 -
1690879691.0773833-CDS-C-linearis_contig109:328844..3288911690879691.0773833-CDS-C-linearis_contig109:328844..328891Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 328845..328891 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1118.1prot_C-linearis_contig109.1118.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig109 323321..328891 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig109.1118.1

>prot_C-linearis_contig109.1118.1 ID=prot_C-linearis_contig109.1118.1|Name=mRNA_C-linearis_contig109.1118.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=179bp
MEARESVKNGLPEGSKVTEVMKGIAARWRELGEAEKAEWTAKAALDKDRY
EQELAMYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEA
KNMDMSKMLGQEWNRMSEEEKEPYKTKANDDTMRYRQAMAVWKDGGADAL
ADHMAARGDADAAAAKYEEEEAEGVDRT*
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mRNA from alignment at C-linearis_contig109:323277..329071-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig109.1118.1 ID=mRNA_C-linearis_contig109.1118.1|Name=mRNA_C-linearis_contig109.1118.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5795bp|location=Sequence derived from alignment at C-linearis_contig109:323277..329071- (Chordaria linearis ClinC8C monoicous)
CAGTATGACGGAGAGGAGCACGTGACCTACGAGGGCGACGGGGGGCTCGA
GGACAGCAGCTACGCGGAGAACGATGGGGCCGCGGCGGGCGCCACCCCGA
GCAAGCGGCGCAAGAAGCGCGCCTACAAGAAGGCCCCCGACGCCCCGCGC
AGGGGCAGGAGCGCCTACGTCCTCTTCTCCATGGAGGCCAGGGAGTCGGT
CAAGAACGGCCTCCCCGAGGGCTCCAAGTGAGAGCTATGAGTAGTGTAAT
TCATAATTCATCACCATGTCTGCTGGTGGCAGAAGCAAGCAGTGTGGGTG
TCGTCGGATCTTGTCTACCTGTACCGGTCGCGAAAGGCGTGTGCCGCTGT
GGGGGCATCACCTGCTTGTCTCTCTTTGCTGCGGAGCGGCAGCAGTCAGT
GTCGGCGGCGTGTGTCCTGTCAACTCACGTGGGAAGGGCTTCTGGCCTGT
GTCGGAAGATGAAGATCTCACACCTTTTTTTTCGGTGTCGCCACCGCACC
CACTTTGTAGTACACAATACAGCATGGGGTTGTGATGGAAGTCAAAATTG
AAAATTGAAAAATCTCTAACGGCCGGTCGGCCGCCCCTCTGCTCGGTATG
CAGCCAAACTCTCTATACCACCGGCGTGCTGCGGTCTGGTACAGTGTATG
ACATGCCGCCTGAAGAAGAATAGCACAGATTGCGAATGAGTGTGCGCATT
TCGTAAACCGGCCGTTATCGTGTCTTCTTTTTTCTTTTTTCTACCCAGCA
TCATCCCAAGGATCCAAGGATGATGTAAGGTGCATGTTTCGTGTTCCCGG
CCTTGACCACATATTTCCTTCATCTCATGTAGCACCCTCAAGCAAACCTT
GGGCGCTGGTGATGGTACAACGCGGAGCGCCCGCGCTACGTATCGGCCGT
TATTGCAATCCCCGACTGTCGAGCGGCCAAAAAAGTGAACGCATCCGTCC
CACGTCGTTGCAGTTACCAACTTACCCACCGAGCACCTTTGCCTGTCTGC
TGTTGGTAGGTCTGCTGGATCGTGTATTGAGCATTGCAAAGAAACAGAAA
AGGAAGAAAAAAGCCCCAGTGCTTACCCCCTTCTGTGTGACCCCGGTTGG
TTATAATTGTACAGAAAAATACACTGAACAAGAAAGTGTAGTACTCTAAA
TGCACGGCAACGTGTAGTACACGTCTCGCCTTGATCGGAAAGGGACTACT
GTCGCCAAAATAAATGGGACGAAAACACACACACACACACACACACACAC
ACACACATCTCCTTCGCCAGCGCACATTGCATACACACACGCACAGAGGG
GTCCTGTTCGCGTCCTTTCCAGAGCGTTTATCTTTCTCAGCTAACTATGC
GTGCAGCAGCGACAACTATTATAAGCTGTCGCCTTCCGGCCTGTTTCGTG
TGGTTAAACCTGCTAACCGACCCCGCACGATCCCGCTCCTGCTCACATAG
GGTGACGGAGGTGATGAAGGGCATCGCGGCAAGGTGGAGGGAGCTGGGCG
AGGCCGAAAAGGCGGAGTGGACGGCCAAGGCCGCCTTAGACAAGGACCGG
TAAGCAGCTTTTATAGTGTATAGTCGACATCTATTCAAGGCACACAAACC
GGTCGCCCCGGTGGCCTAGTGGTTTAACCTCGAACCCACTAGCAGCAAAG
TCTGGAGTTCAATTCCAAGGAAAGGTGATTATTTTGCGACTTCGCCGGTG
AAAGCGATAACATAGCTGAAAAAGCTCGTGAGTACCAAACTTCGACTTAG
CACGTTGACGATGGAAGGGATGGCTGCACCCTTCTCGCGATAAAATCCAA
GGCAAGCACCGCAGGAGGAAGGTGGGGCAAAAAAGAAACAGAAAAAGAAG
AAAAAAGCCCCAGTGTTTACCCCCCCCTGTGTGACCCCGGTTGGTTCTAG
TTGTACAGAAAAATACACTGAACAAGTGTAGTACTCTAAATACACCGCAA
CGTGTAGTACACGTCTCGCCTTGATCGGAAAGGGACTGTCGCCAAAATAA
ATGGGACGGGACGAAAAAACACACACACACACACACACACGCACACACAA
GGTTGTTGAATGAGTGCGCCTACGTAGGGCGGTGGGGGGGGGGCACAGCA
GTGTCTCAGCTGGTTGCCTGGTGTTCTTTGGCACACCGAACACATGGTTG
ACCGTGTGTGGAGCCAGGATGTGAGCATGCCATGACGGGAGGTGGGAGAG
GGATCGGCGCGGGGGGAGGGGGGTTCGAAGGGGGTGTTTGAAGTGTAGTA
CATACTCCGTACCTGTTTTGTTTGATCTACCGTATTCATGAGACCGAAGA
TATGTTTTCCCCCATTTATTGGTCATCTTTTGCTTGATTTTTTTCGTCGG
CTTTGTTGTTTTGTCTTGTTGATTTCTGAGACAGAGGGTATGTGTTCGTC
GTTGGTTGATCATCCGCTGCCTTGTCGGCTTTATTCTGCTTCTATTCTAT
CCTATGTCGGCTTTGTGTGTTTTGTGTTTTTTCGCCGTCGGGGGTATCAG
CGTTCAGAACCAGAACCAGTAAAAGAGCACTGACAAGCCCCTTGGGCGAC
GTGTTGGTGGCCTACAAGTACAGCAGTACACGCGCTCGCTGGCGTCTGAG
GTTGTTGCTAGCTGTCTTCGCCAATAGCAAGGCCACCCGTAGCATGAAGC
GCTGGACGTTCCCCAAGAACTCGTCCATTTTTGGATTGACAAAGTCAACG
CTCGTTGGCCTCGCCGAGCACTGCGGTAGGTAACCCCCCACGGCTTACCC
CCCTCGGCCAATGCTCACGCCGTCGTTCTCGTCTCTTCCTCTCTTCCTCT
CTTCCTCTCTTCCTTGTTTTCGCTGCTGCTGTCATTGCTGCTGCTGCTGC
TGCTGCTACAATTGTTTACTGTTTGGCTTGCTGGTGACCCCGACTACCGT
ACCGCCGCAGTTACGAGCAGGAGCTGGCGATGTATGACGGCCCCCTGAAA
GTGCCCAACAAGCGGGCCAAGAAGGACCCGCTCGCCCCCAAGCGCGCCAT
GAGCGCATTCCTCCACTTCAGCCAGTCCATGCGGCCCCGGCTGCGCGAGA
CGTACCCGGAGGCGAAGAACATGGACATGTCCAAGATGTTGGGGCAGGTG
AGCAGAGCAGAGGGCAGGAGTGGATTGGATTGGAGTGGATGAGAGTTGGG
AGATTGAGATTGACATGATGCGGAGGGTTTAGTCGGAGATCGGGGAACAC
ACGGCTATATTTTTCTAGGCGCTCGCTGGTGTTGTTGGGTGAAGCAGGAT
AGATGAACTATACGGATGTTGTCGGGAAATGTCTGAATTCGGGGGGGAGA
GACAGGGCTGCTGCACCCACGAGATGATGGACGAGGGTAGGGCATATATT
TATACTTCCTCTGTGCCATAAGTCTCACAGTTATGGACGTTGAATCGTTG
GGGTACTCCCACGTTGACGTGTATCCCGTGGTTGGGTGCGTTAGATTGAC
GACACGCGTACAGAGCTAACTCTTTTTTTTTTGAAGAAAATCGAAGGTCG
TCTTGAGCACTAAAATCACGTCAAGAACATTTTCGCCTGTTTTGCCCAAT
TTTGGGACTTCTCGATCCATTTAGGGCCGTTCTTTCTTATCGAGCAAAAA
ACATTCACGGATTCGTGAAAAGGAAATCCACGGATTTGTGAAAAATTCCG
CCGCGTTCTTATCGCATATCCCCTCTGGCCCTCTGCTATTGCGACTACCC
TCTCGTCTAGCCTCACCAAAGGACTTAAGCAACAGGTTGCATGCACACTA
CTCGCCGATAGTACGATAGGCTAGCTGTTTCTGACAGAAGGTATTATCCT
CTGGCATGCCCTATGAGAGGTGATATCGTGAAGTTGATCATCGTGTTGGA
CTTTCGGTCGCTTTGGCGGGCACAGAGCAACTCATCCCACAACAACAGCA
AAACCATCGACTCGTGACATTTATTTTTGTAGGTAGCGGCCTGTGACTTG
GCCCTCTGAGGGGTTGGTACAAGTTTTGTACACTTTTGTGTGTAAGAGCA
GCCCTCCTACCGCGTCTGCCCGATCCCTCCTCTGTTTCCTCGGATTCGTG
AATCGAACAACCGCGTTTTTTTCGCCGCCCTTGTTTTCCTCGGATTCGAG
GAAAATTGTTTCACGCATTCACGAATCCGTGAAAAAACTTGCTCGGTAAG
AAAGGCCCTCAGACCCAATATTGGCCAAATTTGAATATTGGACGTTTTCA
CGCCAATCATTAGCGATTACATTTACAGCAAGTTACAGCCGGTGCAAGGC
AACGTTGCGGAGATATCCAAAATCAATGTTTGTTTTGCGATTTTGGCCTT
TGTTCACCATTTTTCGCGATTTTTCTTGTCCCCCGGTCTCCCACATGTTT
TGCCGGGATATCGCGGGAAAATCAACCATTTCTGGCCCGACCAAAAAAAA
ATTGGCCGTGCGGTTGCATGGGACAGGAACTCCTTGCGTTTCGAAAGCAA
TGTGTTTAAGCTAAAAAAACGCAGGAGAATGCGGAAAAAAAAAATCAAAT
CGGACACCGTTTAGGGGTCGTACAAACGTGTAACTGCACAGACTTATGGC
ATAGAGGAAGTATGGCTGCAAGAGGAGAAGTCTCGGCTCTGGATGGTGTG
TGATTCATTCATCAGAGGATCAACATCTATCAAAACTCTGGCTTTACTCG
TAGGGCTCGGAGTAGGCACCTACCTGCCCCTCTTGCCCGCGTGCTGTTCG
TGCTATTCGTCAACAATGGGCGTGTTTCACGTGTTCCACGCCCACGCCAA
GACGCCACGGTGTGCGTTTTAAGATAAAGCAAACGAGCTGCCAGACGTTG
CGCACGCGCAGTTGAGAGCTCTCCCGCTGAGAAGCAAGCGGCTCCGTTGA
GTCGTGATTTTTTCGGCATGACCGCTGACCTTTCATTTTTTGCCTATTGT
TTCCCTTGCTCTCTCTCTCTCTTCTCTCTTCCCTTGGGCGGGGTGTTGTG
CTTGCTTGATGTGTGGTGGACGGCAGGAGTGGAACCGCATGTCGGAGGAG
GAGAAGGAGCCATATAAGACCAAGGCCAACGACGACACCATGCGGTACCG
TCAGGCCATGGCGGTGTGGAAGGACGGGGGGGCAGGTGTGTGTGTGGGTG
GGTGGGTGTGTGTTTCGTTATATTTCTGATTTAAGTGAGCATCGACGGCG
CTAACCGATCGACCAATGAACAGACGTCAGCCTTTGAAGCGGGTGAAAAG
CGCAAGTTACCCCCCTTTCCTACGTGTTTTGTGTGTGTCGAAAGTTTTTA
CCGTTGCCAGACCGTAAGTCTAAGGGCGACAAGTTTACTTGCGACCGCTC
GAAAGTCGAAACGAGGGAGCGCTACATTGTTTTGCCCGGCAGTGGATGCA
CTTTCCTACCTTTCGTCCTCTCTCCCTCTCTTCCGTCAGAGGGAGAACGA
AAAGAATGGACCAAGTCATTCAACGTCTGTTAGAAGTGAGAGCCTTTTCT
ACGCCCTCTACAATATATACCTATCTCCACCTCCTCCTTCCGCCGTTCCA
TGGTGCATATGTACAACCCCCCGCCTCTCCGGTTTTGCACGAAAACTGGT
CTTGTCGGAGCAACTCAACCCAAGCCTCATTTGTGATGTATTGCTTATAC
GCCCTTGCCTATCCTGCCCTGCCCTGCCACTGCGCGTCGCGTGTGCTTTG
CTCCAGACGCGCTGGCGGATCACATGGCGGCACGTGGGGACGCAGACGCG
GCGGCGGCCAAGTACGAGGAGGAAGAGGCGGAGGGGGTCGACAGAACATA
AAATGCGGCGGACGGACGGACGGACGGACGGAAAATTACTTAATA
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Coding sequence (CDS) from alignment at C-linearis_contig109:323277..329071-

>mRNA_C-linearis_contig109.1118.1 ID=mRNA_C-linearis_contig109.1118.1|Name=mRNA_C-linearis_contig109.1118.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at C-linearis_contig109:323277..329071- (Chordaria linearis ClinC8C monoicous)
ATGGAGGCCAGGGAGTCGGTCAAGAACGGCCTCCCCGAGGGCTCCAAATG
GAGGCCAGGGAGTCGGTCAAGAACGGCCTCCCCGAGGGCTCCAAGGTGAC
GGAGGTGATGAAGGGCATCGCGGCAAGGTGGAGGGAGCTGGGCGAGGCCG
AAAAGGCGGAGTGGACGGCCAAGGCCGCCTTAGACAAGGACCGGGTGACG
GAGGTGATGAAGGGCATCGCGGCAAGGTGGAGGGAGCTGGGCGAGGCCGA
AAAGGCGGAGTGGACGGCCAAGGCCGCCTTAGACAAGGACCGTTACGAGC
AGGAGCTGGCGATGTATGACGGCCCCCTGAAAGTGCCCAACAAGCGGGCC
AAGAAGGACCCGCTCGCCCCCAAGCGCGCCATGAGCGCATTCCTCCACTT
CAGCCAGTCCATGCGGCCCCGGCTGCGCGAGACGTACCCGGAGGCGAAGA
ACATGGACATGTCCAAGATGTTGGGGCAGTTACGAGCAGGAGCTGGCGAT
GTATGACGGCCCCCTGAAAGTGCCCAACAAGCGGGCCAAGAAGGACCCGC
TCGCCCCCAAGCGCGCCATGAGCGCATTCCTCCACTTCAGCCAGTCCATG
CGGCCCCGGCTGCGCGAGACGTACCCGGAGGCGAAGAACATGGACATGTC
CAAGATGTTGGGGCAGGAGTGGAACCGCATGTCGGAGGAGGAGAAGGAGC
CATATAAGACCAAGGCCAACGACGACACCATGCGGTACCGTCAGGCCATG
GCGGTGTGGAAGGACGGGGGGGCAGGAGTGGAACCGCATGTCGGAGGAGG
AGAAGGAGCCATATAAGACCAAGGCCAACGACGACACCATGCGGTACCGT
CAGGCCATGGCGGTGTGGAAGGACGGGGGGGCAGACGCGCTGGCGGATCA
CATGGCGGCACGTGGGGACGCAGACGCGGCGGCGGCCAAGTACGAGGAGG
AAGAGGCGGAGGGGGTCGACAGAACATAAACGCGCTGGCGGATCACATGG
CGGCACGTGGGGACGCAGACGCGGCGGCGGCCAAGTACGAGGAGGAAGAG
GCGGAGGGGGTCGACAGAACATAA
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