mRNA_C-linearis_contig109.1116.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: D8LKU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU2_ECTSI) HSP 1 Score: 706 bits (1821), Expect = 3.700e-239 Identity = 437/796 (54.90%), Postives = 495/796 (62.19%), Query Frame = 3
Query: 471 LLESNYRVELEATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXG-ANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESGAAMKHLWSPGEGVFLPRYTSTTTNTSFFARPSTSAAFSALLSPGLDRFKEDSVVDTLFSSGEVSFRCGDHPVVDLECGYGGNGSSRS----GAVDLGXXXXXXXXXRDGSVPVYGEAXXXXXXXXXAAALFNPLAEIWAREATEEAAREAGAPVGGRILEAPAGMGGGDVGTXXXXXXXXXXXXXXXXXAAAGAR----------RVWVLHNFLAVRGFHRHQLDGIAAWLANSTLSLLSPDPAPADSY-YYDGLRGGTGCGNGSIVDVFRFHRAFDGDSGLPLPGPEGNSSSVAASVWVLLLLGDEPDGGNDFPPITHATLFVLVAVELAFSFAMGASCLVFSVNLVRKLREEDQPPYRN------GVGGSEYT-------------GASVGLVGTNKEEYSRLTENGDGEGEAGEEXXXXXXXRSRPGPAGQAPTTAAAEFARSRGIGSLLSRSAGSRLDRY-DDDSDDEYWESSTAVAM----TASNGRRPRGDAGV 2738
LL NYR ELEATIPSPL+D HQESTTSVMVAEAWAHVDQ RARAE+LSIFRGQW NGLVPTVRYAPGYE DFLGGS LPGPGGW G ANTS+LAA+PLHAEAALRIFDLSPRDAEARLWLQ LFP LFRYHDYLHGSR DP+TGLVY+ HPWE EVS DSALWP LL + R +A ESW+PPPIP SVSSV GFPG +AF+AA+FLS+CSAR G VD+DV RECPF+LQDVQFNAAL+RSDKALLELAGILEATRSGWQ+K F ARP+TS+ FSALLSPGL FK ++ ++ L S G+VSFRCGD PV+DLECGYG N S G V+ XXXXXXXXX AA LF+P A A EE E A G++ A T A AR RVWVLHNFLAVRG R L+G++ WLANST SLL P Y YY G R +FRFHRAFDG SGLPLPGPEGNSSS+AA+ +LLLLGD PDGGNDFPPITHATLF+LVAVELAFSFAMG SCL+F+V+L+RKL +EDQP + + G GGS +VG+ T E+ R G+ G AG+ R R + + TA AEF + RGIGSLLSR AGSR+D Y DDDS ++Y E+ VAM TA+ GR G + V
Sbjct: 65 LLLENYRDELEATIPSPLIDAHQESTTSVMVAEAWAHVDQQRARAELLSIFRGQWENGLVPTVRYAPGYEADFLGGSFLPGPGGWGGRSSDKNASSAQSAGGANTSSLAAIPLHAEAALRIFDLSPRDAEARLWLQDLFPALFRYHDYLHGSRNDPETGLVYVHHPWETEVSADSALWPSLLADARAQATKESWVPPPIPSSVSSVAGFPGKKAFQAAIFLSDCSARHGRVDEDVQRECPFLLQDVQFNAALMRSDKALLELAGILEATRSGWQTKT---------------------------------------------FLARPATSSGFSALLSPGLAPFKANAAIEALLSPGDVSFRCGDFPVMDLECGYGENASGGGWGGLGVVEGXXXXXXXXXXXXXXXXAGDRGIVTGSGDGGAAVLFSPAA---AGPGLEELGVEGDA---GQLESRVANTRR----TAAEVPAVPPPATDFSAEATTAARFDAEDGGSSSRVWVLHNFLAVRGLRRLSLNGLSVWLANSTSSLLGNPPEGEYEYRYYYGARADXXXXXXXXXLLFRFHRAFDGFSGLPLPGPEGNSSSLAAAASILLLLGDAPDGGNDFPPITHATLFMLVAVELAFSFAMGVSCLLFNVSLLRKLAKEDQPTHHSQGRHSIGDGGSXXXXXXXXXXINGNIGNTAVGVARTKAEDGDRNEAQGERVGGAGDSWRR----RGRGSSSAASAVTAGAEFGQGRGIGSLLSRRAGSRVDLYYDDDSGEDYLET---VAMSTRDTAAGGRADAGRSSV 798
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: A0A835Z1J8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J8_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.910e-59 Identity = 221/706 (31.30%), Postives = 294/706 (41.64%), Query Frame = 3
Query: 564 AEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRY-------APGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHG---------SRGDPDTGL----------------------------------------------------VYIQHPWEAEVSPDSALWP-PLLRETRERAANESWLPPPIPPSVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECP-------------FMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESGAAMKHLWSPGEGVFLPRYTSTTTNTSFFARPSTSAAFSALLSPGLDRFKEDSVVDTLFSSGEVSFRCGDHPVVDLECGYGGNGSSRSGAVDLGXXXXXXXXXRDGSVPVYGEAXXXXXXXXXAAALFNPLAEIWAREATEEAAREAGAPVGGRILEAPAGMGGGDVGTXXXXXXXXXXXXXXXXX-----AAAGAR------RVWVLHNFLAVRGFHRHQLDGIAAWLANSTLSLLSPDPAPADSYYYDGLRGGTGCGNGSIVDVFRFHRAFDGDSGLPLPGPEGNSSSVAASVWVLLLLGDEPDGGNDFPPITHATLFVLVAVELAFSFAMGASCLVFSVNLVRKLREED-----QPPY 2387
A A AH DQ RA+AE++++ QW +G +P+ R+ + D++ G+ LPGP W G NT+ALAALPLHA AL+++ LS R A+ARLWLQ +FP L+R+H +LH SRG G V + HPWE + D+ W L + AAN S+ PPPIP SV + +PG + + +FL+ GF+ W E P F + DVQFNA L+ SD+ALL LA IL+ATR WQ++V+T + + +Q WAA + AA+ LWS G G T S L P VD + G H L G G S+ G V D + P XXXXXXXXX A AAR A R+L +GGG G AAA A RV +L LA RG G++ WL N+T L P G G G G + F RA+ D+G P G G SSS+AA+ ++L+ D G +++PPI+HA +F L+ EL F+FA+G SCLV S+ LVRKL E + Q PY
Sbjct: 7 ARALAHSDQARAQAEVVAVLNSQWDSGFIPSARFPAESANSSGSGNNDWVEGTALPGPRFWRGCVGRN--------GDNTTALAALPLHAHVALQVYALSDRGADARLWLQQIFPALYRWHAHLHAVRAARSVIASRGATSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGSAVVVLHPWETALPLDAEAWRGAALNGAIDAAANASYTPPPIPASVLGLAEYPGDQVYSTELFLA------GFLG--AWGELPGPXXXXXXXXXXXFGVVDVQFNAVLMLSDRALLALAEILDATRRSWQTRVFTADDLQHMQRWAAPGAASAALDALWSNGTGAVAD----------------TGGLLSRYLPP--QGPLPAGGVDFNLNLGGPRAGASAHAQPQL----GTRGGSQ-GDVQTEPSLERVQGQHDPTSPNPSXXXXXXXXXXXXXXXXXXXXFAALXXADLPAARAAALA---RLL-----LGGGAAGVAGRAFRCGGGLQYPLPQEACTPAAAAAALGSSSLRVALLDAVLAQRGAAARGYPGVSGWLVNATTELFCPRAG-----------GQEGQGGG-----YAFARAYRVDTGAPADGEYGVSSSLAAAAAIVLMREDGAQGPSEYPPISHAVMFGLMVSELVFAFAVGVSCLVLSLQLVRKLHEGEATALQQRPY 649
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: A0A4D9DAW9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAW9_9STRA) HSP 1 Score: 183 bits (465), Expect = 3.120e-44 Identity = 187/689 (27.14%), Postives = 282/689 (40.93%), Query Frame = 3
Query: 471 LLESNYRVELEATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWA-NGLVPTVRYAPGYEGD-FLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESGAAMKHLWSPGEGVFLPRYTSTTTNTSFFARPSTSAAFSALLSPGLDRFKED---SVVDTLFSSGEVSFRCGDHPVVDLECGYGGNGSSRSGAVD-------------LGXXXXXXXXXRDGSVPV-YGEAXXXXXXXXXAAALFNPLAEIWAREATEEAAREAGAPVGGRILEA------PAGMGGG-----------DVGTXXXXXXXXXXXXXXXXXAAAGA-----RRVWVLHNFLAVRGFHRHQLDGIAAWLANSTLSLL---------SPDPAPADSYYYDGLRGGTGCGNGSIVDVFRFHRAFDGDSGLPLPGPE---GNSSSVAASVWVLLLLGDEPDGGNDFPPITHATLFVLVAVELAFSFAMGASCLVFSVNLVRKLREEDQ 2378
LL +N+ E T+PS P+ +ST+S+ A A+A D E+++ GQW GLVP +R+ P EG +L G+ PGP W +T+ LAALP HA A+++F++ RD +L +FPP+F+YH YLH SR D LV+ HPWE+E+ DS +W L T+ER A E+W P ++ G+PG + F ++L E AR + D + + PF+ DV+FNA L +D AL ++A +L+ S T + R A + +++LW+ GE RY S + P LD E +V L + + D +V G GG SRS + R+ SVP + + P + + ++ + P G + + P + GG ++ T + A RV +LHN + RG + G WL N+T++L+ P P P +RF R FD SG + G S++AA++ +LL D P+ PPI+H F LV VEL +FA G C VFS++L R+L D+
Sbjct: 40 LLLTNFDAEQGWTVPSKATAPYLDSTSSLFTAYAYAKFDPDAGMKELIACLSGQWPFTGLVPRIRFPPSSEGSAWLEGTYYPGPAQWQTPRDGSAAAL------STAGLAALPWHAIVAMQLFNVR-RDDAGLSFLAQVFPPIFKYHQYLHTSR-DAKNHLVFSYHPWESELPGDSPVWSAALAATKERVAAEAWSPRVPLDEPAAAPGYPGDDVFGPELYLVELMARLEYEDARIQQSTPFLALDVEFNAVLAAADVALADMAKVLQLHSSS------TVDDAMRSAATGWADSATTRLEYLWT-GE-----RYAS--------------YLLATRAQPTLDEASEGESMAVRADLLEGDGLKIQRADVKLV----GGGGGKRSRSWGFEGRASRLYPPSFPSTAADPQRAPGSRNHSVPSPWRPPTRQRQLRHHGHSGSKPKLVLPSTVSSPPSPPPVPLPPGAFLPLSVVSSFWPLYVEGGTPRSRLDDLLVEIITPGLDASFDCQGDVFRLPVSGCAVPDPLPRVSLLHNLVVQRGLAVNGDVGFNRWLLNNTVALVCAASMDPFAQPPPKPP---------------------AYRFSRYFDPVSGTAFGEKQDMFGKESTLAAALVWILLHTDAPNRAET-PPISHDVTFALVVVELIIAFATGVGCFVFSLSLFRELSRADK 668
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: K8YV71_NANGC (Glycoside hydrolase family 37 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV71_NANGC) HSP 1 Score: 157 bits (396), Expect = 3.710e-39 Identity = 93/264 (35.23%), Postives = 138/264 (52.27%), Query Frame = 3
Query: 471 LLESNYRVELEATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQW-ANGLVPTVRYAPGYEGD-FLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELA 1256
LL +N+ E T+PS P+ +ST+S+ A A+A D E+++ GQW + GLVP +R+ P EG +L G+ PGP W +T+ LAA P HA A+++F++ FPP+F+YH YLH SR D LV+ HPWE+E+ DS +W L T+ER E+W P ++V G+PG + F ++L E AR + D + + PF+ DV+FNA L +D AL ++A
Sbjct: 29 LLLTNFDAEQGWTVPSKATAPYLDSTSSLFTAYAYAKFDPDAGMKELIACLSGQWPSTGLVPRIRFPPSSEGSAWLEGTYYPGPAQWQTPRDGSAAAL------STAGLAAPPWHAIVAMQLFNV--------------FPPIFKYHQYLHTSR-DAKNHLVFSHHPWESELPGDSPVWSAALAATKERVEAEAWSPRVPLDEPAAVPGYPGDDVFGPELYLVELMARLEYEDARIQQSTPFLALDVEFNAVLAAADVALADMA 271
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: A0A848ZKB1_9DELT (Glycoside hydrolase (Fragment) n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZKB1_9DELT) HSP 1 Score: 129 bits (324), Expect = 1.810e-29 Identity = 85/267 (31.84%), Postives = 141/267 (52.81%), Query Frame = 3
Query: 471 LLESNYRVELEATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDT-GLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILE 1268
+L+SN+ T PSP + PHQ + S +A +AH DQ RA+ E+LS+F+ QW+NG+VP + + P G + P P W G +S + PL A A I++ + A+A+ +L +FP L H Y + +R DPD GLVYI+HPWE+ + A PL ++ S+ + + + P E ++ ++L + R + ++D+++ECPF++QDV FN+ L R+++ LLE+ +L+
Sbjct: 20 ILDSNWTGSY--TKPSPSLYPHQWNWDSGFIAMGYAHYDQKRAQQEILSLFQSQWSNGMVPQIVFNPQALGHYF-----PEPDFWQVPD-----------GRFSSGITMPPLQAIACWHIYEEARDKADAQDFLGIMFPKLMASHRYFYQTR-DPDRKGLVYIRHPWESGLDNSPAWDRPLRNIQIDKTILPSYERKDLKHGIPAEQR-PSDEDYDRYVYLVDLFRRLNYREEDIYKECPFLVQDVLFNSILCRANRDLLEIGRVLK 266
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: UPI0019152E37 (hypothetical protein n=1 Tax=Ktedonobacter sp. SOSP1-52 TaxID=2778366 RepID=UPI0019152E37) HSP 1 Score: 128 bits (321), Expect = 8.120e-28 Identity = 97/312 (31.09%), Postives = 143/312 (45.83%), Query Frame = 3
Query: 507 TIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVP--------TVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPP------SVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESGAAMKHLWSPGEGVFL 1400
T P L+ HQ S S VA H DQ RA E+ S+F+GQWANGL+P T++Y P +E + GS L P TS + P+HA A L I+ + + A +L+ +F L +H YLH R GLVYI+HPWE+ +S +W +LR R R P IP + P E ++ +L + G+ + ++ +CPF++QDV FNA L ++D+ L E+A I+ P +FE+ WA + S A LW G+++
Sbjct: 25 TKPGALLYHHQWSWDSAFVAIGTVHYDQARAEQELRSLFQGQWANGLLPHIIFDPDATIKYFPSFE-FWETGSSLQAP-----------------RDQQTSGIVQPPVHATAILHIYRHAQDTSRALAFLKDMFAKLQAWHAYLHRERDPQGEGLVYIRHPWES--LDNSPIWDTILRRMRLR-------PEDIPAYTRVDTQTVNAADRPSDEDYDRYAYLVRFFSSRGYDEAEIRLDCPFLVQDVLFNALLCQADRDLAEIARIVGED----------PTRFEK---WAQQT-SQAVNSKLWDEEHGIYV 295
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: A0A7C1MQS5_9DELT (DUF547 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1MQS5_9DELT) HSP 1 Score: 129 bits (325), Expect = 3.400e-27 Identity = 87/302 (28.81%), Postives = 149/302 (49.34%), Query Frame = 3
Query: 507 TIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSVIGF---PGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESGAAMKHLWSPGEGVFLP 1403
T PSP + PHQ + + +A +AH ++ RA E+ S+FR QW NG+VP + + P G++ P P W G TS + PLHA A L I+ + A +L+ ++P L H YL+ R TGLVYI+HPWE+ + +S W L+ +++ LPP ++ + P + ++ ++L + + + +++++ +CPF++QDV FN+ L R+++ L+E+ I+ + ++ W ARA S + + +WSP G F P
Sbjct: 30 TRPSPGLYPHQWNWDAGFIAIGYAHYNEDRAMGEIASLFRHQWENGMVPQIVFNPKALGNYF-----PEPDFWQVPG-----------GRLTSGITMPPLHATACLHIYQHAKNRRRAHDFLKDMYPKLMASHRYLYLHRDPEGTGLVYIRHPWESGLD-NSPNWDRPLKNIH---VDKTKLPPYERKDLAHGVPAEQRPTDQDYDRYVYLVDLFRKNQYHEEEIYHQCPFLVQDVLFNSILCRANRDLVEMGKIVH-------------QDVGEVEEWLARA-SRSIRERMWSPERGQFDP 297
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: X0SXI5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0SXI5_9ZZZZ) HSP 1 Score: 120 bits (301), Expect = 1.100e-26 Identity = 82/266 (30.83%), Postives = 137/266 (51.50%), Query Frame = 3
Query: 468 ALLESNYRVELEATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWP-PLLRETRERAANESWLPPPIPPSVSSVIGFPGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGI 1262
++LE N+R E TIPSP + PHQ S S ++ ++H DQ RA+ EMLS+F GQWANG++P + + G +G F P W TS + P+HA AAL +++ S + EA +L+ +FP + +H YL R ++G+ I HPWE+ + +S W PL R E + S P E ++ ++L E + + ++ +++ PF ++D+ FN+ L +++A++++AGI
Sbjct: 14 SILEKNWREEY--TIPSPKLYPHQWSWDSGFISIGYSHYDQDRAQKEMLSMFEGQWANGMLPHIIFRGG-KGYF------PSAEYWQTELSEHSPEI------KTSGITQPPVHALAALHVYENSSDNEEAISFLKKIFPKILLFHRYLLTKRDPENSGIATIFHPWESGLD-NSLRWDEPLARIKVEDLPQYKR----VDTEKVSSDQRPTDEDYDRYLYLIEVMKKNNYDEEKIYKVIPFKIKDITFNSILYAANQAMIKIAGI 259
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: A0A2V3J6P6_9FLOR (Alpha,alpha-trehalase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6P6_9FLOR) HSP 1 Score: 125 bits (313), Expect = 4.480e-26 Identity = 87/307 (28.34%), Postives = 150/307 (48.86%), Query Frame = 3
Query: 468 ALLESNYRVELEATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARL---WLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSV----IGF----PGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESG 1355
A+L+ N+ + +T+PSP + PHQ S S +A ++H D ++A AE ++FR QW NGL+P + + P + S PGP W + TS + P+HA A+L I++ + + +L LQS++P L +H+YL+ R LVYI+H WE+ + +S W + A N L P P + V +G P ++ A++L + + +Q +++ PF++QDV FN+ L R+ +AL ++A IL ++ + + + + + AE G
Sbjct: 42 AVLDGNWVTSMNSTLPSPNLYPHQWSWDSAFIALGYSHYDTHKAIAETDALFRAQWRNGLLPHIVFNPNADE-----SYFPGPAFWKIHTSPAHPLN-----SQTSGIVQPPVHAIASLAIYNNAKSAQQKKLAMHHLQSVYPKLVNWHNYLYNERDPLKENLVYIRHMWESGMD-NSPAW--------DDALNAIQLTPDQIPQYTRVDKGKVGSHHERPNSHFYDRAVYLIKVFYDNSYDEQAIFKSSPFLIQDVLFNSILARAGEALADIAHILGKKQAAVHHREQSAKTAAAISSKLYHAEDG 329
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Match: A0A846A149_9CYAN (Glycoside hydrolase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A149_9CYAN) HSP 1 Score: 123 bits (308), Expect = 4.490e-26 Identity = 84/300 (28.00%), Postives = 143/300 (47.67%), Query Frame = 3
Query: 504 ATIPSPLVDPHQESTTSVMVAEAWAHVDQYRARAEMLSIFRGQWANGLVPTVRYAPGYEGDFLGGSILPGPGGWXXXXXXXXXXXXXXXGANTSALAALPLHAEAALRIFDLSPRDAEARLWLQSLFPPLFRYHDYLHGSRGDPDTGLVYIQHPWEAEVSPDSALWPPLLRETRERAANESWLPPPIPPSVSSVIGF--PGHEAFEAAMFLSECSARFGFVDQDVWRECPFMLQDVQFNAALVRSDKALLELAGILEATRSGWQSKVYTPEQFERLQAWAARAESGAAMKHLWSPGEGVF 1397
AT P+P + PHQ S S +A +AH DQ +A E+ S+FRGQW+NG +P + + D+ PGP W A TS + P+HA AA I+ + A+ +L LFP L +H YL+ R + GL+YI+HPWE+ +S +W +L+ + N LPP ++ + P ++ ++L + + + + + PF++QDV FNA LV++++ L +A +++ + + AWA + G + LW+ + ++
Sbjct: 24 ATKPAPRLYPHQWSWDSAFIAMGYAHYDQAKAMQELRSLFRGQWSNGFLPHIVFRQREVKDYF-----PGPDYWQTERSPEGPKPHQ---AATSGIIQPPVHATAARHIYRHASDKKAAKHFLAELFPRLKAWHWYLYRDRDIDNNGLIYIRHPWESGQD-NSPMWDAVLQRIK---VNRETLPPYRRVDLNEIDSSHRPSDRDYDRYVYLMVQARENQYAETHIQKNFPFLIQDVLFNALLVKANRDLAAIAELID-------------QDAQPFHAWADKTARGMNSR-LWNGKKCIY 297 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig109.1116.1 >prot_C-linearis_contig109.1116.1 ID=prot_C-linearis_contig109.1116.1|Name=mRNA_C-linearis_contig109.1116.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=805bp MRLVQRQSYVFFVLAHILRTCAAVERADADATSTSRCSTGGGAAAAATALback to top mRNA from alignment at C-linearis_contig109:284116..290158+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig109.1116.1 ID=mRNA_C-linearis_contig109.1116.1|Name=mRNA_C-linearis_contig109.1116.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6043bp|location=Sequence derived from alignment at C-linearis_contig109:284116..290158+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig109:284116..290158+ >mRNA_C-linearis_contig109.1116.1 ID=mRNA_C-linearis_contig109.1116.1|Name=mRNA_C-linearis_contig109.1116.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4830bp|location=Sequence derived from alignment at C-linearis_contig109:284116..290158+ (Chordaria linearis ClinC8C monoicous)back to top |