mRNA_C-linearis_contig109.1113.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: D8LKU4_ECTSI (Formin-like 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU4_ECTSI) HSP 1 Score: 1008 bits (2607), Expect = 0.000e+0 Identity = 878/1663 (52.80%), Postives = 970/1663 (58.33%), Query Frame = 1
Query: 10 ACSRRGRKADAHRRWESVSSTIDIPCGVFLDVPAEREALFHDNNNENHDSHAAAAAGPPKSHQRDCGDRRGSGADVSDAACGLQGGAVPPNSQADHHAGTRQSGESTAADGGDDDHEGY--PDNIEDFMATLLDGMRSDSVQLATSARNVVANTYQVVVRPWEAVTRMAAPFLSPNPHHIEPSRENTRRGHELLDNALSFRMPGAF-AGRPRQGSNETTAQKGEAGGRGGGEGALQAIDGNSPPRSTPASPPRGR---------------GRTAAGAKRGRRAQRGRLGAVKLEVTPPKSRGDCEGGGGGDRG---LPLPGGRGRSQTPSPQGGKAGCDDDGCXXXXXXXXXXXNFLRRMSSSMSPPRRGLAGAFARVLPFGAGGK------EYGASP--CRAVANQNPASEVATSAGTSAAAPATGAVGTAPRRRGGV-TEGSRIDLRGLDRAKGGNQPRAYHCKDRSVVVLGRERMLSVLPDDSESGGVGDGG-------------SGVVTWVLRYTELESCCINVSAGKESECSVGDVIVEVTTRPSRKKS---TAXXXXXNTPGRRSFCLTNPSECLELLQSIQLRWQPSSSTPXXXXXXXXXXXTHPPPSSPLAATPPLRGAGAGNENXXXXXXXXXXXATPPKTGDPGG----------GDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGK----------------------ATSPFSEVKRGVIILESPAKMLRDQLKERHEQHERGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LRVPASMLPPAIGAAEAAESAG---PDLAKYRNMKTAGVPEAAIRHKMTLDQVDMSHAERVFSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH---------------------LPGMCKLPPXXXXXXXPLRM-------LNRGVSDKSLTITAGLRRPPPLPPGSPFDPTSSCRSEGGGFFGGRGAAFAGAAARPETPRRTSKPLLNLHWDVLPPAKIERTVWAKRR----------GAGAXXXXXXXXXKTVDDAEVLELEKLFFKXXXXXXXXXAGR-EFGRRSTLEPGTGXXXXXXXXXXXXXXXKARRHGGAGAA--------GGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAKXXXXXXXXXXXXXXXXXXXXPRKKPRSRSPAGKK---AWPGGAPPGCRGRG---------------SGTGSGGTRPSLSGGRRGVPSVGRAGTGA-------LRGGXXXXXGAAAA--LVRVEGLDLQDELEHVREAAKTPVGEVLMDLRQARKGLRQVKGELQRVLDDEAKKRENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKYSETAQEEDSSAAPPGVRKLSAFVDKAEIRLSAIERSANSCVGLCKDLGEYFGEGADEAQSHHIFGTLVQFLDLLQEAKKVEGLC 4527
AC+RRGRKA+AHRRWESVSSTIDIPCGV L+ + +N S + G V A H E Y +++ FMATL+DGMRSD VQLA SA++VVANTYQVVVRPWEAVTRMAAPFL NP HI+PSRENTRRGHELLDNAL+FRMPGAF + RPRQ A G GGG GAL+ IDGNSPP R A KRGR AQRGRLGAVKL+ TPPK +GG GG R LP + T +P C LRR+S S SPPRRGL+ F VLPFG E G+S CRAVA A +AG TGA APRR V TEGSRIDLRGLDRAKGGN PRAY CKD S+VVLGRERMLSVLPD S SG G SG+VTWVLRYTELESC INVSAGKESE +VGDV+VEVTTRP + S + N PGRRSFCLTNPS+CLELL+SIQLRWQPSSS P AG E +TP + GD GG G+G XXXXXXXXXXXXX XXXXXXXXXXXXXXXX A+SPFS VKRGVIILESPAK+LRDQLKERHEQHERGLK XXXXXXXXXXXXXXXXX L++P S LP A E E+AG P L+KY+NMK AG+P+ AIR KMT+D + S+ V P+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LP K+P XXXX XX L RG SDKSL + GLR P PP SP D SSCRSEGGGFFGGR A T RRTSKPLLN HWDVLPPAKIERTVWAKRR G +VDDAEV ELEKLF K XXXXX + GRR TL GTG XXXXXX GGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLV GLDP+ EVLT EDLQRLE CLPTA+EL TV+A++GPAAALG AETFFRAL+DTPR KV+A+LFSRQFLGSVAGDAE+RVETL +ACEEAM S+RLA VLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHY+VRT AAK XXXXXXXX + K RS A K+ AWPGGAPPGCRG G SGT SG P +RG + R G+ LR G AAA L RVE LDL+ EL+HVR+A+KTPVGE+++D+RQARKGLRQ K EL R L +E XXXXXXXXXXXXXXXXXX + S + + E + GVRKL+AFV++AE RLS+IE+ A +C+GLCK LGE+FGEG DEAQS HI TLV F+DLL+EAKKVEGLC
Sbjct: 3 ACNRRGRKAEAHRRWESVSSTIDIPCGVVLNDLPHAAVKSVAPSFQNKPSSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGVAGPA--HEXXXXXXXXXXXXXXXXXKEVYIPTEDLGVFMATLMDGMRSDGVQLAQSAKSVVANTYQVVVRPWEAVTRMAAPFLPTNPPHIQPSRENTRRGHELLDNALAFRMPGAFGSARPRQ---PGVADDRVGAGNGGG-GALRTIDGNSPPXXXXXXXXXXXXXXXXXXXXXXXXXDARAAGVRKRGRGAQRGRLGAVKLDATPPK-----DGGSGGSRSGCELPSAAVEPAAATTAPL---RSCSPSASPLQECGMGG--GLLRRLSLSKSPPRRGLS--FKNVLPFGGXXXXXXXXXETGSSTHRCRAVAKP------AAAAGVGGERAGTGA---APRRPAAVVTEGSRIDLRGLDRAKGGNNPRAYRCKDGSIVVLGRERMLSVLPDGSSSGAESGSGIDGXXXXXXXXXSSGLVTWVLRYTELESCSINVSAGKESEHAVGDVVVEVTTRPKTEASGTGSKAASTTNKPGRRSFCLTNPSDCLELLRSIQLRWQPSSS----------------PXXXXXXXXXXXXXGAAGKEKPLAMDSAVLGDSTPSRVGDSGGTGDACWGKAGGEGXXXXXXXXXXXXXXSSLGAVTPLRELREGFAAXXXXXXXXXXXXXXXXXXXXXXEASVVLSPXGSKSEAGSVASSPFSGVKRGVIILESPAKVLRDQLKERHEQHERGLKEDXXXXXXXXXXXXXXXXXLRRRSVSQSPCRSGCGGLNTRGFDPSPLQMPPSKLPDGAAAPEV-ETAGSKQPSLSKYKNMKKAGLPDGAIRQKMTMDDM-ASYVGLVLDPASSSAIPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLSSKIPXXXXXMXXXXXXXXXLPVALGRGCSDKSL-LGPGLR-PRSGPPCSPLDSISSCRSEGGGFFGGRAGGSVPPPAPTPTLRRTSKPLLNFHWDVLPPAKIERTVWAKRRTXXXXXXXXXXXGREACGSPRTTLSVDDAEVEELEKLFSKKTAKXXXXXXXXGQGGRRVTLGAGTGGPGLGGAAVXXXXXXXXXXXXXXXXXXXXXXXXXGGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVSGLDPK-EVLTTEDLQRLEGCLPTAQELRTVMAFSGPAAALGSAETFFRALRDTPRPASKVSAVLFSRQFLGSVAGDAESRVETLRMACEEAMESDRLAAVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYMVRTFAAKERAXXXXXXXXASGKTL----KSKTPPRSSAEKQRSAAWPGGAPPGCRGSGMSGGGTRASGVRREVSGTSSGAASPGAGASQRGAVTPARGGSAVRANSGYLLRAGGKRRGSPAAAVQLTRVEALDLESELKHVRQASKTPVGEIMIDVRQARKGLRQAKEELDRTLVEEXXXXXXXXXXXXXXXXXXXXXXXXSRPSDVSERSCSSSLSPAARGSSSSSLSREGEIEGGSSAGVRKLAAFVEEAEARLSSIEQRARACIGLCKGLGEFFGEGDDEAQSAHILRTLVDFMDLLEEAKKVEGLC 1613
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: A0A7S1GAF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAF2_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.280e-32 Identity = 114/312 (36.54%), Postives = 154/312 (49.36%), Query Frame = 1
Query: 2785 PRRTSKPLLNLHWDVLPPAKIERTVWAKRRGAGAXXXXXXXXXKTVDDAEVLELEKLFFKXXXXXXXXXAGREFGRRSTLEPGTGXXXXXXXXXXXXXXXKARRHGGAGAAGGRVKKV-------SLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
PRRTS L LHW+ LP K++R+VWA R A ++DA++ LE +F RS A + GGA AA R K SLLD R NNV+IGL FRR + + + LD EA L + L+++ +PT+ E+ V AY G A LGPAE +F + R KV A L+ +F + VE L ACE+ M SERLA+VL +L IGN++N GT QG A GFR+ SL KL+ TK+ D+KTT++ Y+V T+ +K
Sbjct: 592 PRRTSVQTLKLHWNTLPQEKLQRSVWATPRSNQAITD--------MNDADIKNLEAMF------------------RSA---------------------PAAKPGGAAAAQARAAKKAATPKVESLLDFKRANNVSIGLAQFRRFPSHTAVFSAIYRLDGEA--LPPDKLEQMLELMPTSAEVRLVQAYKGDVARLGPAERWFHSAGAIQRLKAKVEAALYRARFA-EIDELVSGHVELLSSACEQVMKSERLASVLMSILAIGNIMNSGTDQGEAQGFRLDSLPKLTATKA-VDRKTTLIDYLVTTLESK 852
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: A0A6U5HT13_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HT13_9STRA) HSP 1 Score: 128 bits (321), Expect = 9.170e-27 Identity = 98/294 (33.33%), Postives = 141/294 (47.96%), Query Frame = 1
Query: 2806 LLNLHWDVLPPAKIERTVWAK---RRGAGAXXXXXXXXXKTVDDAEVLELEKLFFKXXXXXXXXXAGREFGRRSTLEPGTGXXXXXXXXXXXXXXXKARRHGGAGAAGGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYI 3678
L+NLHW L ++E ++W + ++ G+ TV+ A++ LE+LF K +R G G+AG + L++ NR NNVAI LKAF+ + L + LDP+ +++ + +Q L LPTA+EL V Y G + L PAE FFR + R KV AM + L + + L ++AM S+RL +LE VL IGN++NEGT +G A GF++ SLLKL+ TKS D K TVL YI
Sbjct: 72 LVNLHWTKLDSERLENSIWGQVGAKKKHGSESSGDEGSVTTVE-ADISTLEQLFRKKNAA-------------------------------------TKRGQGKGSAGAKKGSAKLVEANRANNVAISLKAFKDFEQPAGLVSAIADLDPDRKIV-GDRIQFLRNMLPTAQELRDVAKYQGDGSDLLPAELFFREMLKVKRIELKVQAM-HTMDILPPQTEELRQKFRILANISQQAMESDRLKQLLETVLSIGNIMNEGTMKGGASGFKMDSLLKLTQTKS-VDGKMTVLDYI 324
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: B8C8N4_THAPS (FH2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8N4_THAPS) HSP 1 Score: 113 bits (283), Expect = 6.190e-25 Identity = 80/182 (43.96%), Postives = 99/182 (54.40%), Query Frame = 1
Query: 3142 LLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRT 3687
LLD+ R NN+AI LKAF LA + LDPE +++ E +Q + LPT +E+ + Y G L AE FFR + R KV M R V +A A TL C + +NSE+L VLE VL+IGNL+NEGT G F+ SL KLS TKS D KTTVL YIV T
Sbjct: 1 LLDLTRANNIAISLKAFNDF-TFRSLAETINDLDPECKIV-GERVQFIPNLLPTPKEILAIKKYNGDDDKLITAELFFRQIVSIKRIEDKVKVMKTMRTLEEHVE-EARAGFNTLQEVCGQVLNSEKLIQVLEMVLNIGNLMNEGTLNGGVEAFKFESLPKLSQTKSF-DGKTTVLDYIVET 178
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: A0A7S2PGP2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PGP2_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.070e-24 Identity = 96/316 (30.38%), Postives = 144/316 (45.57%), Query Frame = 1
Query: 2761 GAAARPETPRRTSKP--LLNLHWDVLPPAKIERTVWAKRRGAGAXXXXXXXXXKTVDDAEVLELEKLFFKXXXXXXXXXAGREFGRRSTLEPGTGXXXXXXXXXXXXXXXKARRHGGAGAAGGRVKKVSLLDVNRGNNVAIGLKAFRRVGDV-SELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
GA RP ++ S+ LLNLHW L P E++ W K K V+D++V +LE+LF R+ +P K A + + K +LD NR N+ I L +F +V + +L + LDP + +++Q +++ LP E + + ++ G L P+E F L R K+ + F + A E L C++ M+SE+L VL+ VL IGN++NEGT G A GF++ SL+KL+ TKS +D K TVL YIV T AK
Sbjct: 88 GAPGRPSLTKKPSRSRGLLNLHWTPLSPTSAEQSFWGKTPAK----------KKAVEDSDVAKLEQLF----------------SRKKNEKP------------------KGANTSKALVSSKKTKTAQILDSNRAQNITITLTSFNKVFESHDDLINTLADLDPNKRIC-GDNIQFMKSLLPKPEEKKALQSFRGNRDHLLPSEQFLLRLVGVTRIDAKIGIIETMGNFA-EITSRLSANYELLARVCKQIMSSEKLHAVLDTVLTIGNIMNEGTRAGGASGFKLESLMKLTETKS-TDGKMTVLDYIVMTFVAK 356
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: A0A1Z5JCL0_FISSO (FH2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCL0_FISSO) HSP 1 Score: 119 bits (298), Expect = 4.300e-23 Identity = 102/308 (33.12%), Postives = 140/308 (45.45%), Query Frame = 1
Query: 2794 TSKPLLNLHWDVLPPAKIERTVWA---KRRGAGAXXXXXXXXXKTVDDAEVLELEKLFFKXXXXXXXXXAGREFGRRSTLEPGTGXXXXXXXXXXXXXXXKARRHGGAGAAGGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVET---LGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
TS L++LHW L ++ ++W+ K+RG + E EL +LF K RST + TG +K LLD+ R NNVAI LKAF+ ELA ++ LDP ++ E Q + LPT+ E+ + Y G L PAE +FR L + PR K + F DA +E+ L C + M SE+L +LE VL+IGN++NEGT G A GF+ SLLKL+ TKS SD KTTVL ++V +K
Sbjct: 1265 TSSNLVSLHWTPLSGKDLDDSIWSRTSKKRGVSTKVIGP-------EKTEFNELMELFQKKANTGKI---------RSTKKTDTGTGS---------------------------EKAKLLDITRSNNVAISLKAFKAF-PFEELAEIISFLDPLRKI-RGEKCQFIRDILPTSSEIRVIKEYDGSDDRLEPAELWFRHLVNIPRLEVKAHILRTMEMFNA----DATLLMESFVILDEVCHQVMKSEKLQELLEMVLNIGNIMNEGTRTGGASGFKFDSLLKLTQTKS-SDGKTTVLDFLVNVFVSK 1522
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: A0A7S2LD87_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LD87_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.160e-22 Identity = 83/202 (41.09%), Postives = 111/202 (54.95%), Query Frame = 1
Query: 3094 RHGGAGAAGGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
+ G A A G K LLD+ R NN+AI LKAF + LA + LDP+++++ E +Q + LPT +EL+ + Y G + L AE FF+ L R KVA + F A +A A +TL C + MNS +L +L VL+IGNL+NEG+ G F+ SL KLS TKS +D KTTVL YIV T K
Sbjct: 863 KSGEANAGSGMAK---LLDITRANNIAIQLKAFNDF-TLRALAETINDLDPDSKIV-GERVQFIPQLLPTPKELQAIKKYKGESDRLNTAELFFQQLLPVKRVEDKVAVVKAMCTF-NEHAEEARAAFKTLEEVCGQVMNSAKLEQILLMVLNIGNLMNEGSLDGGVEAFKFESLPKLSQTKS-ADGKTTVLDYIVETFIEK 1057
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: A0A1Z5K408_FISSO (FH2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K408_FISSO) HSP 1 Score: 115 bits (289), Expect = 4.880e-22 Identity = 80/195 (41.03%), Postives = 106/195 (54.36%), Query Frame = 1
Query: 3115 AGGRVKKVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
AG K LLD+ R NNVAI LKAF+ ELA ++ LDP ++ E Q + LPT+ E+ + Y G L PAE +FR L + PR K + F E+ V L C + M SE+L +LE VL+IGN++N+GT G A GF+ SLLKL+ TKS SD KTTVL ++V +K
Sbjct: 1328 AGSGSDKAKLLDITRSNNVAISLKAFKAF-PFEELAEIISFLDPLRKI-RGEKCQFIRDILPTSTEIRVIKDYDGCDDRLEPAELWFRHLVNIPRLEVKAQILRTMEMFNAEATLLMESFV-ILDEVCHQVMKSEKLQELLEMVLNIGNIMNQGTRTGGASGFKFDSLLKLTQTKS-SDGKTTVLDFLVNVFVSK 1518
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: B7FTV5_PHATC (Formin homology 2 containing protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTV5_PHATC) HSP 1 Score: 115 bits (288), Expect = 6.380e-22 Identity = 78/189 (41.27%), Postives = 104/189 (55.03%), Query Frame = 1
Query: 3133 KVSLLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
K LL+V R NNVAI LKAF+ + ELA + LDP ++ + + L LPT E++T+LAY G L PAE +FRA R KV + + E L AC + M SE+L +LE VL +GN++NEGT G A GF+ SLL+L+ TKS SD +TTVL ++V AK
Sbjct: 1208 KAMLLEVTRSNNVAISLKAFKDFSFL-ELAETIALLDPLRKI-RGDRILFLRDLLPTISEVQTILAYKGTDDRLVPAERWFRATAQIRRIETKVQVLQSMETLRSEILALCE-NFRLLARACRQVMESEKLEALLEMVLRVGNIMNEGTRTGGAAGFKFDSLLRLTQTKS-SDGRTTVLDFLVTVFVAK 1392
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Match: K0RD64_THAOC (FH2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RD64_THAOC) HSP 1 Score: 112 bits (280), Expect = 5.410e-21 Identity = 76/186 (40.86%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 3142 LLDVNRGNNVAIGLKAFRRVGDVSELARLVGGLDPEAEVLTNEDLQRLEACLPTARELETVLAYTGPAAALGPAETFFRALQDTPRGGGKVAAMLFSRQFLGSVAGDAEARVETLGLACEEAMNSERLATVLEKVLDIGNLLNEGTYQGNACGFRISSLLKLSHTKSHSDKKTTVLHYIVRTIAAK 3699
LLD+ R NN+AI LKAF LA + LDP+ +++ E + + LPT +E+ V Y G L AE FFR L R KV M F A + A +T+ C + MNSE+L +LE +L++GNL+NEGT G FR SL KLS TKS +D KTTVL YI++ + K
Sbjct: 1356 LLDLTRANNIAISLKAFNDF-TFRSLAETINDLDPDTKIV-GERVHFIPNLLPTPKEIAAVKKYKGDDDKLITAELFFRQLISIKRIEDKVQVMRTMSTFE-EQAEEVRAGFKTMQQVCAQVMNSEKLIQILELILNVGNLMNEGTLDGGVEAFRFDSLPKLSQTKS-ADGKTTVLDYIIKMVIEK 1537 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig109.1113.1 >prot_C-linearis_contig109.1113.1 ID=prot_C-linearis_contig109.1113.1|Name=mRNA_C-linearis_contig109.1113.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1510bp MATACSRRGRKADAHRRWESVSSTIDIPCGVFLDVPAEREALFHDNNNENback to top mRNA from alignment at C-linearis_contig109:259177..267398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig109.1113.1 ID=mRNA_C-linearis_contig109.1113.1|Name=mRNA_C-linearis_contig109.1113.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8222bp|location=Sequence derived from alignment at C-linearis_contig109:259177..267398- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig109:259177..267398- >mRNA_C-linearis_contig109.1113.1 ID=mRNA_C-linearis_contig109.1113.1|Name=mRNA_C-linearis_contig109.1113.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9060bp|location=Sequence derived from alignment at C-linearis_contig109:259177..267398- (Chordaria linearis ClinC8C monoicous)back to top |