mRNA_C-linearis_contig109.1094.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: D7G2N6_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N6_ECTSI) HSP 1 Score: 514 bits (1324), Expect = 5.380e-164 Identity = 275/361 (76.18%), Postives = 294/361 (81.44%), Query Frame = 2
Query: 410 LISAVREVSLARRDLGWGVGAVAMRLTMLGILRHGRRNKPGVGQIPQEATEISGGREWLDSRVAEWERFLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMR-----QKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWR---GLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRRAVDRLTNLNTILSPSTKAAAAV---IKNALSGLG 1459
LISA REVSLARRDLGWGV A+AMRLTMLG LRHGR+N IPQEAT I + WLD R +EW+RFLRWAHASYGWTEEV+V+RAGFAPGELEVVAL+ GKSR+RPMAPTYVLAVDHGRREI+LSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEP+LTSL ERLP+YRVCFTGHSMGGGIAAM SMLIRD AT R +Q Q P TA SS L G G AGG + G G+G GP VYSFATP CVSLELARGCEGWVDS+VHGDDAIPRLSTVSLELLKEDMTAAEWRRAVDRLT+LNT+LSPSTKAAAA IKNAL+GLG
Sbjct: 2 LISAFREVSLARRDLGWGVDALAMRLTMLGFLRHGRKNNASDSGIPQEATLIDRNQGWLDGRASEWQRFLRWAHASYGWTEEVIVKRAGFAPGELEVVALSSGKSRNRPMAPTYVLAVDHGRREIVLSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPELTSLAERLPDYRVCFTGHSMGGGIAAMASMLIRDSATRRLQQXXXXXXXXXQGEEPPSTARKRASSSTNLDHRGSRKRRGTAAGGGKISAGAGLGGSGGPEVYSFATPSCVSLELARGCEGWVDSVVHGDDAIPRLSTVSLELLKEDMTAAEWRRAVDRLTDLNTVLSPSTKAAAAAATAIKNALTGLG 362
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A6H5KTE0_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE0_9PHAE) HSP 1 Score: 495 bits (1275), Expect = 1.190e-155 Identity = 269/376 (71.54%), Postives = 289/376 (76.86%), Query Frame = 2
Query: 386 SNRHGLPTLISAVREVSLARRDLGWGVGAVAMRLTMLGILRHGRRNKPGVGQIPQEATEISGGREWLDSRVAEWERFLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKH------------RPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLG---VGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRRAVDRLTNLNTILSPSTKAAAAV---IKNALSGLG 1459
S+RHGL LISA REVSLARRDLGWGV A+AMRLTMLG LRHGR+N G IPQEAT + + WLD R +EW+RFLRWAHASYGWTEEV+V+RAGFAPGELEVVAL+ GKSR+RPMAPTYVLAVDHGRREI+LSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSA ELVKQVEP+LTSL ERLP YRVCFTGHSMGGGIAAM SMLIRD A+ R +Q P TA S L G +G GP VYSFATP CVSLELARGCEGWVDS+VHGDDAIPRLSTVSLELLKEDMTA EWRRAVDRLT+LNT+LSPSTKAAAA IKNAL+GLG
Sbjct: 10 SSRHGLAMLISAFREVSLARRDLGWGVDALAMRLTMLGFLRHGRKNNAGDSDIPQEATLVDRDQGWLDGRASEWQRFLRWAHASYGWTEEVIVKRAGFAPGELEVVALSSGKSRNRPMAPTYVLAVDHGRREIVLSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSARELVKQVEPELTSLAERLPNYRVCFTGHSMGGGIAAMASMLIRDSASRRLQQXXXXXXXXXXXXXXXXXGGEPPSTARKRASSXTNLDHRGSRXXXXXXXXXXXXXXXXXLGGSGGPEVYSFATPSCVSLELARGCEGWVDSVVHGDDAIPRLSTVSLELLKEDMTATEWRRAVDRLTDLNTVLSPSTKAAAAAATAIKNALTGLG 385
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A835Z4C2_9STRA (Lipase_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C2_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.590e-49 Identity = 127/341 (37.24%), Postives = 172/341 (50.44%), Query Frame = 2
Query: 410 LISAVREVSLARRDLGWGVGAVAMRLTMLGILRHGRRNKPGVGQIPQEATEISGGR----EWLDSRVAEWERFLRWAHASYGWTEEVVVQR-AGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRRAVDRLTNLNTILSPSTK 1417
L V+E+ LA +DLGW + MRL +L LR NK VG + + G + E D +WER LRWAHASY + +QR G P +++V+ +S + P+ P +VLAVDHG ++++LSVRGT D + HF P FL GYAHRGF QSA L + V+ L + Y + TGHS+G GIAA+ +ML+++R G W G L A FATP CVSL LAR CEG+V ++VH DD +PRLS ++L L++D A EW R RL L+ + + STK
Sbjct: 56 LAGTVQELRLAHKDLGWAFDGLMMRLALLLYLR----NKT-VGPAHLKELSLDGLKDREVEVSDEDARQWERALRWAHASYAVSSPQQLQRRVGEPPDQIQVLL----RSAATPLIPAHVLAVDHGHKQVVLSVRGTLGLRDLASCAHFGPTQFLSGYAHRGFVQSAEALFEDVQAPLREAQQAYFGYSLMLTGHSLGAGIAALTAMLLKER-------------------------------------------GAWEGA---LAA----VCFATPSCVSLSLARACEGYVTTLVHADDWVPRLSALALNRLEQDTRAREWHRQKLRLALLSPVTNRSTK 337
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A024GL34_9STRA (Lipase_3 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GL34_9STRA) HSP 1 Score: 118 bits (296), Expect = 9.320e-24 Identity = 88/329 (26.75%), Postives = 146/329 (44.38%), Query Frame = 2
Query: 395 HGLPTLISAVREVSLARRDLGWGVGAVAMRLTMLGILRHGRRNKPGVGQIPQEATEISGGREWLDSRVAEWERFLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRRAVDRL 1381
H LP L +SL R+ + + A G+L + +++ + A + S R +V +++R A Y T E +G + V+ + G + P +L +DH +E+I+++RG+ + D EPFLDGY HRG ++ +++ E + L ER P+Y V FTGHS+G G+AA+ S+ A HR+ +R+K + FATP C++ +LAR C +V SI+HGDD IPRL SL L++ ++ +WR ++ ++
Sbjct: 67 HTLPALKILAEGLSLIRQSYLYQKWSAAD--WFFGLLVYAHQHRTSRDPAVRNAIKSSAARS-TPPQVGSLLKYVRICDAIYAPTTEQFCAESGIP--QSRVIRVHSGGV----LFPKSILLLDHADKEVIVAIRGSASILDFCIDLCLLHEPFLDGYGHRGIVHASRWMLQHSESDILDLHERYPDYSVVFTGHSLGAGLAALASI-----ALHRKSSDTLREKLK-------------------------------------------CIGFATPACITPQLARDCRPFVTSIIHGDDCIPRLHQHSLLRLQKLVSTFDWRTSLKQM 338
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: M1V7J8_CYAM1 (Lipase_3 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V7J8_CYAM1) HSP 1 Score: 114 bits (286), Expect = 9.800e-23 Identity = 82/278 (29.50%), Postives = 120/278 (43.17%), Query Frame = 2
Query: 575 REWLDSRVAEWER---FLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSM--LIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGW-------VDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRRAV 1372
RE + AE +R F R AH +Y +E + F + L + + S P Y +A+D R I+L++RGT F D T P PFL G AH G ++A L +V L + PEY + FTGHS+GGG+A++++M L D R +Q R K + YS+ TP CVSLELAR +G + ++V GDD +PR S S++ + ++ A WR +
Sbjct: 72 REQVQLEAAELKRLHHFARLAHGAYSANDEEL-----FKHTPVYAKTLLKARWSSSQEEPAYYIAIDEAFRSIVLAIRGTDTFSDVFTDLSLHPTPFLGGTAHAGMTRAALRLYDEVREMLRTARTNYPEYDLVFTGHSLGGGVASILTMKLLWEDDPLLRLFEQHNRPKL-------------------------------------------LAYSYGTPACVSLELARKIQGSPPDLRDALTTVVLGDDLVPRASAASMDRIVRELAAFNWREQI 301
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A1W0A9C7_9STRA (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9C7_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.030e-20 Identity = 90/337 (26.71%), Postives = 141/337 (41.84%), Query Frame = 2
Query: 458 WGVGAVAMRLTMLGI-----LRHGRRNKPGVGQIPQEATEISGGREWLDSRVAEWERFLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKE-----DMTAAEWRRAVDRLTNLNTILSPSTKAAAAVIK 1438
W +RLT+L LR+ + N I TEIS ++ + + ++R ASY T ++ + F E+E++A G AP Y L +DH R EI+L +RG+ + D T EPF GY HRG +A+ L + ++ + P Y+V GHS+G G AA+VS+L W L L +FA P C++++LA+ CEG++ S+V GDD +PRL++ +L L++ DM++A D L T + K V++
Sbjct: 48 WTSAEWLLRLTVLATHNSTSLRYRQSNS-----IKNHLTEISKELTQENNFLVDLPHYVRVCDASYASTVNGFLKESKFNQEEMEILAQHPGGV----FAPKYYLYIDHTRDEIVLVIRGSASIQDFCTDMCMDHEPFQSGYGHRGIVHAAYWLDWNLRDEMVKVAAENPNYKVQVMGHSLGAGTAALVSIL-------------------------------------------------WSPLIPRL----KCIAFAPPACLTMDLAKSCEGFITSVVCGDDCVPRLNSHNLTKLQKEVEIFDMSSALKNMMADELEEKKTQATVGMKQIREVLQ 322
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A7S0VDJ0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VDJ0_9CHLO) HSP 1 Score: 100 bits (248), Expect = 8.140e-18 Identity = 83/304 (27.30%), Postives = 130/304 (42.76%), Query Frame = 2
Query: 545 PQEATEISGGR-EWLDSRVAEWERFLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAF-GDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRRAV----DRLTNLNTILSPSTKAAAAVIK 1438
P AT + GR E LD A + AHA+Y T E + +L V + + P Y +AVDH + +I SVRGT+ + D + P G H G +AH L+K+ ++ +++ L +YR+ GHSMGGG+A+++++LI H+ + PS T + A PC +S LA C +V S+V DD +PRL+T SL LL++ + + WR + + N+ +++ A AAV K
Sbjct: 411 PSSATRLDPGRQEVLDLLAA-----VELAHAAYKPTIEALAAMTSLKATDLRVF-----HPEPQRLQPAYFIAVDHVNKRVIWSVRGTQLYLEDLLVDLAAAGTPLAGGTTHWGMTHAAHWLLKREAARVGGMLKVLRDYRLHLIGHSMGGGVASLMALLI----------------HKDQRVSKLIPPSRVHCT-----------------------------TIAAPCVMSYSLAVECAPYVTSLVLADDLVPRLNTSSLTLLRDTLAESNWREDLGSKFQTIQNVQEVVANLPAAVAAVAK 659
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A0L0DBN8_THETB (Lipase class 3 family protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DBN8_THETB) HSP 1 Score: 96.7 bits (239), Expect = 2.150e-17 Identity = 83/325 (25.54%), Postives = 139/325 (42.77%), Query Frame = 2
Query: 407 TLISAVREVSLARRDLG-WGVGAVAMRLTMLGILRHGRRNKPGV--GQIPQEATEISGGREWLDSRVAEWERFLRWAHASYGWTEEVVVQRAGFAPGELEVVALTRGKSRSRPMAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSF--ATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEWRR 1366
T+ S + + A RD+G W + L L H R+ + V G+ P + + L + W R + A+Y ++E VV+ G++ ++ T KSR P Y LA+DH ++++++ +RGT + DAIT EP L G AHRG +A + + + +L+ Y V GHS+GGG AA++++L+++ V SF A C VSL+LA +V ++VH DD +PR ST +L L++++ + W++
Sbjct: 54 TMKSVAKAILEATRDMGPWKPSDLTAGLYFL-RKAHMRKAEEAVASGEHPYLKEKPIKDKA-LVKHMLYWSRVIL---ATYSGSDEAVVEALGWSADDIVRSDWTSQKSR-----PAYFLALDHDKQKVVVGIRGTASAADAITDAAAALEPCLTGKAHRGIYTAASWFMNNILDDIYALLNDHDGYSVMTVGHSLGGGTAALLAILLKEEEFMD------------------------------------------------------VESFVLAPACAVSLDLAEAAADYVTTVVHADDCVPRASTRALINLRQEVKDSPWKQ 314
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A5B8MIU9_9CHLO (Putative lipase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIU9_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 3.540e-17 Identity = 71/230 (30.87%), Postives = 114/230 (49.57%), Query Frame = 2
Query: 740 APTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEPFLDGYAHRGFAQSAHELVKQVEPQLTSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMT-AAEWRRAVDRLTNLNTILSPSTKAAA 1426
AP+ +AVDH + ++L++RGT DA+T E FLDGYAH G +A ++K+ P+L S + R P Y + TGHSMGGG+AA+ +ML+ +K A+ A S G G + + A R Y+ A+P V+L L+ C +V S++ G D +PRLS +++ L + + AA R ++ + ++ ++ AA
Sbjct: 261 APSCYVAVDHEHKWVVLAIRGTFHSSDALTDACAEEEEFLDGYAHAGMCAAAWNMIKEQLPRLASALHRHPGYELVTTGHSMGGGVAALFTMLLHSDDADVEK-------------AAIAGLSEGFDPQAGRDFDTEAVLNTVR--------TSKCYTIASPSLVNLSLSLRCASYVTSVICGKDIVPRLSIDNVKNLVDQLVGAAPLNRTINAFKKVGEMIGGNSSPAA 469
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Match: A0A699Z5U6_HAELA (Lipase_3 domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z5U6_HAELA) HSP 1 Score: 91.3 bits (225), Expect = 9.550e-17 Identity = 61/217 (28.11%), Postives = 97/217 (44.70%), Query Frame = 2
Query: 737 MAPTYVLAVDHGRREIILSVRGTKAFGDAITITHFRPEP--------FLDGYAHRGFAQSAHELVKQVEPQL-TSLVERLPEYRVCFTGHSMGGGIAAMVSMLIRDRATHRQKQQQMRQKHRPSPTASAAQPSSGALTGPGGEAASGAQAGGWRGLGVGLGAGPMVYSFATPCCVSLELARGCEGWVDSIVHGDDAIPRLSTVSLELLKEDMTAAEW 1360
+ P YV+ D + I+L +RGT++ D T +P + GY+H G A L++QV PQL +L P+Y + GHSMGGG A M++M++RD LG V + A P C++L+LA+GC +V +I++G D +P S+ +++ L+ED+TA+ W
Sbjct: 53 LRPAYVVIRDESLKAIVLCIRGTQSMKDLFTSLTGATKPHHVLTEQGLILGYSHLGMLAGARWLLRQVAPQLKAALAAAGPDYCLRIVGHSMGGGTAVMLTMMLRD-------------------------------------------------LGPEFAEARCV-AIACPACMTLQLAQGCVSFVTTIINGTDIVPTFSSATVDSLREDVTASSW 219 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig109.1094.1 >prot_C-linearis_contig109.1094.1 ID=prot_C-linearis_contig109.1094.1|Name=mRNA_C-linearis_contig109.1094.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=614bp MLLARRCPSTANVARRPLVLCRLARSHGSSSSSKERRNRPHTEGGYNTKLback to top mRNA from alignment at C-linearis_contig109:132253..138906+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig109.1094.1 ID=mRNA_C-linearis_contig109.1094.1|Name=mRNA_C-linearis_contig109.1094.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6654bp|location=Sequence derived from alignment at C-linearis_contig109:132253..138906+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig109:132253..138906+ >mRNA_C-linearis_contig109.1094.1 ID=mRNA_C-linearis_contig109.1094.1|Name=mRNA_C-linearis_contig109.1094.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3684bp|location=Sequence derived from alignment at C-linearis_contig109:132253..138906+ (Chordaria linearis ClinC8C monoicous)back to top |