mRNA_C-linearis_contig107.1040.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A6H5JQW7_9PHAE (PAP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQW7_9PHAE) HSP 1 Score: 833 bits (2153), Expect = 8.440e-292 Identity = 526/760 (69.21%), Postives = 580/760 (76.32%), Query Frame = 3
Query: 207 ICGGDG-GRVLTRQRTGVHSAWVSLPPSHSSFRGSGSPEGPTKASRWTTAPRPSTSTIEGSPSAHSFTPTSSLRERKRRSLATALLCTLQRDDERYAPP---------PPLPP--SPLLARLGGGAVHSARAGRGVGGFRLGAVAAVRSPGDGGGASAVVGGGEELKEAFEAAVGGEGLLGLAGFRDLPDVRELLEDGLLQGSEVIAIWKAVPKADASGDRVDFVGFCEAFARVDSLFEEEEDEREQ------GSAEGAEAGVVGSAVGGRRGAAVEAGEEAEASFFELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLFEDEE-----GEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV-DEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFE--EDEKEDPATTEASATP--------AAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSLSQAEMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLIDNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVRV 2384
+CGG+G GRVL+ QRT HSAWVSL PSH +F GSGS T S W APRPS +GS S P+ RKRR +A AL +L+ D+R+ P P LPP SP LARLGG A H AR GR GGF+LGAV AVRSPGDGG A+AV GG EEL+EAF AAVG E LGL GFR L DVRELLEDGLL+ SEV+AIWKAVPKAD +GDRVDFVGF +AF+RVD+LFEE G AEAG + GG G AV GE EASF ELVGS EG+LDL GLLRW+EVTEL EE LL Q+EVEQMWEGLPKVANRV+AAG GTE+GMLINL GFLEFDR+LSDLFEDEE D+ XXXXXXXXXXXXXXXX AV DE TPEG F++LS+ TGGV+TLD+LLG TEV+ELLED+LM+REEV ++F+ALPKAKGRGSS+SSPAIDVKGF+EFARKLDEMFE E++ E+ ++T+ SA A S PLPDM TS EA K GNAAEAKAR LS+ Q EM DCGMGCGEDKRTEMLEAMEALLATEEGNL+LG+DLGTGLID L GEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGD+SEPLIITVTSDWEVKQTSSLVTGKS+VA+AVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLD +LRIMRGQTARQNFFVFVRV
Sbjct: 1 MCGGEGDGRVLSSQRTSAHSAWVSLTPSHIAFGGSGSTA--TTTSPWGAAPRPSAR--DGSSSVAQLLPS-----RKRR-IAAALFYSLR--DQRHGPAEAAARETVVPGLPPISSPFLARLGG-AAHHAR-GRCAGGFQLGAVTAVRSPGDGGAATAVEGG-EELREAFNAAVGDEEFLGLDGFRALADVRELLEDGLLRDSEVLAIWKAVPKADPAGDRVDFVGFSQAFSRVDALFEEXXXXXXXXXXXXXGEGRVAEAGT--NRGGGESGGAVGPGET-EASFVELVGSSEGVLDLDGLLRWSEVTELFEEGLLNQEEVEQMWEGLPKVANRVQAAGEAGTEEGMLINLAGFLEFDRQLSDLFEDEEESGTDAADQDQXXXXXXXXXXXXXXXXXXXXXVVAATAPASPEAMDLAGKEAVADEGTPEGLFMRLSANTGGVLTLDNLLGWTEVAELLEDDLMSREEVGSVFEALPKAKGRGSSTSSPAIDVKGFVEFARKLDEMFEDVEEDGEETSSTDTSARSDXXXXXXGATASKPLPDMTTS-EAVVTKEGNAAEAKARLLSMCQREMADCGMGCGEDKRTEMLEAMEALLATEEGNLVLGDDLGTGLIDTLAGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDDSEPLIITVTSDWEVKQTSSLVTGKSSVAIAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDANLRIMRGQTARQNFFVFVRV 741
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A7S4MXT9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXT9_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.300e-54 Identity = 178/599 (29.72%), Postives = 283/599 (47.25%), Query Frame = 3
Query: 657 GEELKEAFEAAVGGEGLLGLAGFRDLPDVRELLEDGLLQGSEVIAIWKAVPK---ADASGDRVDFVGFCEAFARVDSLFEEEEDEREQGSAEGAEAGVVGSAVGGRRGAAVE------------AGEEAEASF-FELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLF--EDEEGEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSL-----SQAEMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLID-NLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVR 2381
G+ L+ F +GL+ R +P + ELL DG L E+ IW+A PK D +RVD F + + +D +FE++E E E A+ E V A V AG+E E F+ + GL+ L L +W+EV +L+ E +L + E +++W P+ +PG+ + ++LDGFL F+ L DLF +D+E +D+ AS + V + P G + +V DDL E+ E+L+ + E+ MF+ + A G +S ++ F+ +D MFEED+ ED A S PA+ LP+ A K+ LS S E + CG+ + ++T +L M ++L ++ N++ + G L +L GEW LLY+SS+AM++N+GL+GL + PN KF GL+Q L A + D EY E + + +TV DW ++ + ++ +G T + VAP++++YGF + R++ WK++ + +LDI YLD DLRIMRG T+ FVF R
Sbjct: 82 GDALQALFSKFCNEDGLMTKEEVRSVPVIAELLTDGDLLPEELEDIWRAAPKFPDVDDKMERVDVDSFVQIYRDIDDIFEDDEKEAESVPAKSDEESAVEKLAVKDNDAGVTDDVVETDEDETTAGDEKELEIVFQSICDEAGLVSLDALRKWDEVADLISEGMLGEDEFDRIWGQTPR---------SPGSPEE--LDLDGFLSFNLDLDDLFVFDDQEEDDKDASDDIESSGDGPVLQKRSM----------------------VVGDDLPPGVIFAELADDDFLVGFDDLKRWGELQEMLDGGDLLPLELQNMFEQVKTAPG-----TSDKLNEDDFIALYENIDAMFEEDDDEDDA---GSIEPASS---LPEQ--------------ASVKSDLLSFVAEMNSDEERLPCGLESTDREQTLVLN-MVSVLESQPSNVV--QQRGGKLEQADLTGEWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKQKLEASKFMSDVEYVERIDIP-AGQSFDVTVNGDWSLRGSINIFSGDPTTVLNVAPERVEYGFTSTRADHWKSVGPLNVLDITYLDDDLRIMRGNTSTDTVFVFKR 618
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A1Z5JKP9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKP9_FISSO) HSP 1 Score: 189 bits (479), Expect = 1.730e-47 Identity = 164/599 (27.38%), Postives = 280/599 (46.74%), Query Frame = 3
Query: 660 EELKEAFEAAVGGEGLLGLAGFRDLPDVRELLEDGLLQGSEVIAIWKAVPK---ADASGDRVDFVGFCEAFARVDSLFEEEEDEREQGSAEGAEAGVVGSAVGGRRGAAVEAG--------EEAEASFFELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLFEDEEGEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAA------EAKARFLSLSQA-----EMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLID--NLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVRV 2384
E L++ F EGL+ + + +P + +LL DG L E+ IW+ PK S R+D F + + +D LFE++ +Q A V + A E E+ S F + +GL+ L+ W+E+ +L+ + LL E +++W K + G +D +++DGFL F+ L LFE + E E A XXXXXXX + +P+ F L+ G G+V+ +L+ E+ EL+++ ++ E+ +F A ++ + +D FL + +D++FE D ++ D + A K NA +K L + + +++ CG+ + ++ +L+ + +L E NL+ + G +D ++ G W LLY+SS+AM++N+GL+GL + PN KF GL+ L + + D EY E + E+ +TVT DW ++Q+ SL TG+ ++ +A+ P+++ YG + R++ WK+L + +LD+AYLD DLRIMRG T+ FVF RV
Sbjct: 22 EGLQKLFSEYCDDEGLMSKSSIQRIPFILQLLADGDLLAEELDDIWEKAPKFPDVTTSAARIDVDSFVQVYRDIDDLFEDDGVVSKQEQP----ASAVREPTETKENPATEDQTDYVDKNMEDELESVFNSIADDDGLISKQALVNWDEIEKLLRDGLLGADEFDELWG---------KTKKSLGADDK--LDIDGFLSFNVALDSLFEFSDEEMEEAXXXXXXXXXXXXSTMEDIVEGQLVEEG----------------DRSPQELFALLA-GADGLVSKGNLMRWAELLELIDEGDLSMSELEGIFSA---------NAVAEKLDESRFLALYKAIDDLFEYDVNDES-----------------DKSNESSRANQKVPNAVATRDQPSSKTTLLGMIEVLNEDNDLLPCGLEASDREQANILKVIN-MLEQEPSNLIRSKQ---GAVDENDIAGNWELLYSSSSAMKFNKGLSGLGGSFPNGKFGGLKMRLDSSKYMSDVEYTERISVTPEAASFDVTVTGDWTLRQSISLFTGEPSITLAITPERVNYGPTSTRADHWKSLGPLNMLDVAYLDKDLRIMRGSTSLDTVFVFRRV 558
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A6T7K4J5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K4J5_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.370e-46 Identity = 167/594 (28.11%), Postives = 265/594 (44.61%), Query Frame = 3
Query: 657 GEELKEAFEAAVGGEGLLGLAGFRDLPDVRELLEDGLLQGSEVIAIWKAVPK-----ADASGD-RVDFVGFCEAFARVDSLFEEEEDEREQGSAEGAEAGVVGSAVGGRRGAAVEAG------EEAEASFFELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLFE-DEEGEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSL-----SQAEMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLIDNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTG-DESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVR 2381
GE L+ F GL+ R +P + +LL+ G + E+ IW A PK ADA D R+D GF + + +D LFE+ E E A + + GS+ G + A+ E G +E E +F + S + L+ L W E+ +L+EE +L + E ++MW+G PK +PG+ + +++DGFL F+ L +LF DEEGED V + P G +G +V + +L E+ +L D + E ++F + KA G ++ +D GF+ LD +FEE ++E+ E + K +SL S + + G+ + + E+++A+ AL ++ GT + L G W LLY SS++M +NQGLTG+ +P KF L Q L D ++ E G E +TVT DWE++ + SL TG+ ++ + V +++KYG ++E WK+L M+ LD+ YLD DLRIMRG T++ + FV R
Sbjct: 81 GEALQALFAKQCDSNGLMTKEKLRAVPAIADLLDVGDILSEELDDIWDAAPKFPDIEADAKMDERIDVDGFVQIYRDIDDLFEQGE-AAETAPAATSPSSKEGSSTGDDKEASKEVGNIEDDEDELENAFANICDSSK-LVSREALREWEEIRQLLEEGMLGEDEFDEMWKGAPK---------SPGSPEQ--LDVDGFLSFNVALDELFVFDEEGED-------------------GLEGENNIGDDDVPVVQKKEVLGMVVGDDLPPGVIFADLAGGDLMVGMKELARWKELQGMLLDGELQPTEFQSIFDGIKKAPG-----TTNKLDEDGFIALYEALDALFEEFDEEEELEAERK----------------------------KNKQYLVSLLSAINSDEDRLPIGLETTDTENEEVVKAVVALETAPTNKIITSR--GTIKAEELAGTWELLYQSSSSMVFNQGLTGVGKNLPRTKFSRLLQKLEKTKYSSDVDFIETWDVGIGEDNSFDVTVTGDWELRDSISLFTGEPSLVLKVVAERVKYGVTDQQAEYWKSLGPMLSLDMTYLDDDLRIMRGNTSKSSIFVLRR 607
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A7S2EW54_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EW54_TRICV) HSP 1 Score: 160 bits (405), Expect = 2.600e-38 Identity = 144/538 (26.77%), Postives = 244/538 (45.35%), Query Frame = 3
Query: 828 DRVDFVGFCEAFARVDSLFEEEE-----------DEREQGSAEGAEAGVVGSAVGGRRGAAVEAGEEAEASF-FELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLF--EDEE---GEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSL--SQAEMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLI-DNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVR 2381
+RVD F + + +D +FEEE+ D E + A G + A E +E E F + GL+ L +W+EV +L++E +L + E E +WE K +PG+ D L+++DGFL F+ L DLF EDEE DE ++ V + P G + ++ DDL E+ E+L++ ++ E+ ++ + KA G ++ ++ GF+ ++ +FEE++ ++ G+A D K+ F+S S E + CG+ C E ++ ++L+ + A+ E G+ ++ G +I ++ G W LL++SS+AM++N+GL+GL + PN F GL Q L + + D EY E + S + VT DW++ + +L +G+ T ++V P ++ YG + R++ WK+L + LDI YLD DLRIMRG T+ F+F R
Sbjct: 14 ERVDVDSFIQIYRDIDDIFEEEDGNDTEADPIDSDSTEVLMNDEAGNGGIDDARAENTSEDEEERDEKELEIAFRSICDEAGLVSKEALRQWDEVRDLLDEGMLGEDEFETIWERTLK---------SPGSAD--LLDVDGFLSFNVDLDDLFVFEDEEMMQAADEDSNQT-----------------------QWDAKKEPKMKKNIVVGDDLPPGVIFAELADDDFLLGFDDLKRWGELQEMLDEGDLSPIELQNIYDEVVKAPG-----TTDRLNEDGFVALYDAIESLFEEEDDDE------------GNARDGDKKSFRSDLL-----------AFISRINSDEEKLPCGLECTEQEQQQVLDLVSAM---EAGSSNAAKEKGGNIIPSDVAGNWELLFSSSSAMKFNKGLSGLGGSFPNGSFGGLVQKLQSSKYMSDIEYVERINVRPGSNSFDVRVTGDWKLGSSVNLFSGEPTTIMSVEPDRVTYGPTSTRADHWKSLGPLNKLDITYLDDDLRIMRGTTSTDTIFIFKR 486
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A448ZGI3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGI3_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.940e-37 Identity = 166/583 (28.47%), Postives = 268/583 (45.97%), Query Frame = 3
Query: 660 EELKEAFEAAVGGEGLLGLAGFRDLPDVRELLEDGLLQGSEVIAIWKAVPKADASGDRVDFVGFCEAFARVDSLFEEEEDEREQGSAEGAEAGVVGSAVGGRRGAAV----EAGEEAEASFFELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLFEDEEGEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLS----LSQAEMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLIDNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVRV 2384
+++ + F + L+ +P +L D L +E+ IW+A K+ RVD F + + VD LFE++E E A E EE ++ L GL+ +L W E+ L+EE LL + E E++W AN V + E I+ +GFL F+ L +LFE XXXXXXXXXXXXXXXXXXXX ++ P G + +V +L+ E+ ++LE+ + E+ +F+ +G+ + + F+EF ++D +FEED T + A P + K FLS + + + CG G E + ++L ++ +L + N+++ +D G +L G W L+YTSS+AM++N+GL+G+ + PN KF LRQ L A + D Y+E + S +TV W+++++ S+ TG+ TV + V P ++ YG + R++ WK+L + LD++YLD DLR+MRG T+ + FVF +V
Sbjct: 80 QQVGDLFSKYCDDDNLIDKKTLESMPPFAMMLADEDLLPAELNDIWEAALKSSKDPSRVDSDSFAQIYRDVDDLFEDDEXXXXXXXXXXGETDASSEPADSETQMADATENELDEELSKAYKSLCDE-NGLISKKKMLEWEEIESLLEEGLLGEDEFEELW------ANSV----SDNAESS--IDSNGFLTFNLGLDELFE-----------------------LDXXXXXXXXXXXXXXXXXXXXPRAMVIEGDMPPGVLFSQLADENYLVGSKELILWVELKDMLEEGDLLESELKVIFKKYATPEGK--------LTEETFVEFYDEIDGLFEEDXXXXXXXX------------XXXXPTPPQQAQPNTAMSERVKGDFLSFIDIVIEEDEEPCGFGASEADQEQVLNILK-VLEQQPTNMIVQKD-GNIEQSDLAGTWELIYTSSSAMKFNKGLSGIGGSFPNGKFGSLRQDLIATKFLSDMFYKERIDVNPSSASFDVTVNGVWDLRKSVSIFTGQPTVILNVEPDRVTYGPTSTRADHWKSLGPVNRLDLSYLDDDLRVMRGCTSSETVFVFKKV 604
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A7S4AVJ8_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AVJ8_9STRA) HSP 1 Score: 155 bits (393), Expect = 7.210e-36 Identity = 151/577 (26.17%), Postives = 252/577 (43.67%), Query Frame = 3
Query: 660 EELKEAFEAAVGGEGLLGLAGFRDLPDVRELLEDGLLQGSEVIAIWKAVPKADASGDRVDFVGFCEAFARVDSLFEEEEDEREQGSAEGAEAGVVGSAVGGRRGAAVEAGEEAEAS-FFELVGSPEGLLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLFEDEEGEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSLS-QAEMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLIDNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVRV 2384
EE++E F L+ +P + ++L D L E+ IW+A PK+ RVD F + + VD LFE D+ + +G V A A + G + E S ++ + GL+ +++W E+ L EE LL + E E++W+ G D ++ +GF F+ L DLF E+ XXXXXXX V+ P G + T +V +L E+++LLED + E+ M++ G+ + GFL+ ++D +FE+ P E FL + + + CG G E + ++L ++ +L + N++L +D D L G W L+YTSS+AM++N+GL+G+ + PN +F GLRQ L A + D Y+E + S +TV W+++++ SL TG+ TV + + P ++ YG + R++ WK+L + LD++YLD +LR+MRG T+ + +F +V
Sbjct: 123 EEVRELFSKYCDENFLIDRKTLASMPPIVDMLADEDLLPVELNEIWEAAPKSANDASRVDVDSFLQIYRDVDDLFE---DDXXXXXGDDEISGEVSDADNTPAADANDNGLDEELSKAYDSLCDDNGLISKDKMMQWEEIESLFEEGLLGEDEFEELWKN-----------SVDGENDS--VDANGFSNFNLGLDDLFVLEDX---------------------------XXXXXXXLSVTTTGPRSLVVEGDMPPGVLFSQLADTKYLVGTKELNLWVELNDLLEDGELLASELQEMYEKYAAPDGK--------LTEDGFLQLYDEIDGLFEDXXXXXXXXXXXXXX-------XXXXXXXXXXNPPVNTRVKEDFLSFLDIVVEEDEQPCGFGASESDQEQILNILQ-VLEQQPTNMILQKDGNIEQAD-LAGMWELVYTSSSAMKFNKGLSGIGGSFPNGRFDGLRQELIATKFLTDVVYKERIEVTPSSASFDVTVKGVWDLRKSVSLFTGQPTVILNIEPDRVTYGPTSTRADHWKSLGPVNRLDLSYLDDNLRVMRGCTSSETLLIFKKV 639
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A7S1CS29_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CS29_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.890e-35 Identity = 164/565 (29.03%), Postives = 274/565 (48.50%), Query Frame = 3
Query: 732 LPDVRELLEDGLLQGSEVIAIWKAVPKADASGDRVDFVGFCEAFARVDSLFEEEEDEREQGSAEGAEAGVVGSAVGGRRGAAVEAGEEAEASFFELVGSPEG---LLDLAGLLRWNEVTELVEESLLTQQEVEQMWEGLPKVANRVKAAGAPGTEDGMLINLDGFLEFDRKLSDLFEDEEGEDEPASVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDEVTPEGQFLKLSSGTGGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSLSQAEMVD----------CGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLI--DNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVR 2381
+P + ++L +G L SE+ +W AV ++ S D++D GF + + +D LFE DE E + + E A+A F L +G + L +W E+T LV E +L + E + +WE ++G G ++ ++L+ FL+F+ L DLF +E E+ V XXXXXXXXX XXXXXXXXXXX ++ P F +L++ +V +L E+ +++ + +++EE+ + + KA G + ++ +GF + A +D++FE+ + E +A P+ + E + E K L L E +D CG+ C E ++ +LE + L ++ + G G + D L+GEW LLY+SS+ M+YN+GL+GLA + +F GL+Q + + D EY E+++ + + +T DWE+K SL TGK ++V P + YG +++ WK+L M +L ++Y+D DLRIMRG T+ F++ R
Sbjct: 15 IPSISDMLAEGDLLSSELDDMWDAVV-SNKSDDKIDVDGFVQVYKDIDDLFE---DEGEXXXXXXXXXXXXXXXXXXXXASNADETELAQA-FDTLKDGGDGSSNTISFTQLRQWEEITSLVSEGMLGEDEFKSLWE----------SSGDDGDDN---MDLERFLKFNNALDDLFVFDEDEE------VXXXXXXXXXXDMVEEXXXXXXXXXXXEVQQQQLPVITETDLPPAVLFSQLAN-ENYLVGEAELKRWGELQDMISEGDLSQEELDVLVGRVEKAPG----TDGMYVNEEGFCKLAEAIDDLFEDVDDE--------------AADEPEQQQQDE-------DFRELKVELLELL--EDIDKIGEEEGRLLCGLDCNELEQERVLEVVGELERETYNKVVAASNTGGGAVSKDELLGEWELLYSSSSTMKYNEGLSGLAGGL--TRFGGLKQKIIGTKYLSDVEYTEQVVGKLGGKSYEVKITGDWEMKTELSLFTGKPANVMSVTPDNVVYGPRRDKADHWKSLGPMNMLLLSYIDEDLRIMRGNTSTDTLFIWKR 525
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A7S0C871_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C871_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.110e-34 Identity = 92/312 (29.49%), Postives = 148/312 (47.44%), Query Frame = 3
Query: 1455 GGVVTLDDLLGGTEVSELLEDNLMTREEVSTMFQALPKAKGRGSSSSSPAIDVKGFLEFARKLDEMFEEDEKEDPATTEASATPAAGSAPLPDMKTSTEAAAPKGGNAAEAKARFLSLSQA-EMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLI-DNLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVRV 2384
G V ++L E+ E+L D + E+ +MF A K S + + GF+E +D +FE+DE AG + P +++ Q E + CG+ ED + +L L T + D +I +L G+W L+YTSS M++N+GLTGL + PN +F GL Q A + D +Y+E ++ + + +V DW +K + SL++G T+ +A+ P +KYG R++ WK++R M +LD+AYLD D RIMRG F+F ++
Sbjct: 3 GYTVGREELKRWVELQEMLNDGDVLTSELESMFNAATK-----SPTVPDKLTEDGFIELYEAIDALFEDDED------------GAGDNEAESSNIQEDNDRPSDATIKNGLLDYIAKIQGPEDLPCGLDADEDAQLRILNIASVLETTSTNKV---NDSTMSIIPQDLTGDWDLIYTSSGMMKFNKGLTGLGGSFPNGQFGGLVQTFVATKYIMDVDYKERILVNPDIQSFDASVNGDWNLKSSVSLLSGLPTILIAIEPDMVKYGPTATRADHWKSVRCMNVLDLAYLDDDFRIMRGNMNPDTLFIFKKI 294
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Match: A0A7S1CXT1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXT1_CYCTE) HSP 1 Score: 132 bits (331), Expect = 9.980e-31 Identity = 70/190 (36.84%), Postives = 114/190 (60.00%), Query Frame = 3
Query: 1818 EMVDCGMGCGEDKRTEMLEAMEALLATEEGNLMLGEDLGTGLID--NLVGEWRLLYTSSNAMEYNQGLTGLANTIPNAKFQGLRQILHADGMVFDAEYEEELMTGDESEPLIITVTSDWEVKQTSSLVTGKSTVAVAVAPKQIKYGFITVRSERWKTLRAMMLLDIAYLDPDLRIMRGQTARQNFFVFVR 2381
E + CG+ E++ ++L A L +E + + G G ++ +L G+W LLYT+S+AM++N+GL+G+ + PN KF GL+Q L + ++ D EY E + + + VT +W+++Q+ SL TG+ T + P Q+ YG +++ WK+L + +LDI YLD +LRIMRG TA + FVF R
Sbjct: 66 ERLPCGLESTEEEDKQILRI--ATLLEKESSNRIQSSSGGGSVEQEDLNGKWELLYTTSSAMKFNKGLSGIGGSFPNGKFGGLQQTLISSRLISDVEYTERIDVNPSAASFDVRVTGNWDLRQSVSLFTGQPTTVFSFEPGQVIYGPTKTKADHWKSLGPLTMLDITYLDNNLRIMRGNTATDSVFVFRR 253 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig107.1040.1 >prot_C-linearis_contig107.1040.1 ID=prot_C-linearis_contig107.1040.1|Name=mRNA_C-linearis_contig107.1040.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=747bp MATLRLFRTACACLTMCPFVICGGDGGRVLTRQRTGVHSAWVSLPPSHSSback to top mRNA from alignment at C-linearis_contig107:331988..341012+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig107.1040.1 ID=mRNA_C-linearis_contig107.1040.1|Name=mRNA_C-linearis_contig107.1040.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9025bp|location=Sequence derived from alignment at C-linearis_contig107:331988..341012+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig107:331988..341012+ >mRNA_C-linearis_contig107.1040.1 ID=mRNA_C-linearis_contig107.1040.1|Name=mRNA_C-linearis_contig107.1040.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4482bp|location=Sequence derived from alignment at C-linearis_contig107:331988..341012+ (Chordaria linearis ClinC8C monoicous)back to top |