mRNA_C-linearis_contig107.1038.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: D7FMX7_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX7_ECTSI) HSP 1 Score: 1436 bits (3717), Expect = 0.000e+0 Identity = 831/1344 (61.83%), Postives = 927/1344 (68.97%), Query Frame = 1
Query: 79 PVPGHRKITRSASGLSLAFVGCGLLKPRWSLRAREHCHILADTARRRPVASVVYSSQNARPRMDFGELDGIMQTVLSPTSEPTRTGVSMDPAQEDVVLLDLDTPAILLTAGAGTGKTHTLAARLARILGVEPRRPADLSVENQPAVSGGAEGNAA---RLDRPHARVGEEGTGQWDGCRGGGQVGAHAAAPESVLVLSFTNQGAQDVRERVIAVGVPRAQADRVWAATFHSFAATVLKQNRHLVWAES--SPMGSSHAS-------GLDIIGHAEQVGLVARLLADPHSDEWNSHDDLAAPFYGGEQAFEGSWLS-----SGGSWGMPPTKEERGQEAARRRKESETRAKAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGT----SXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHR-HEDFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTFIYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPRPADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARK--RRGGRGGRWEGITGGEEKQDSR-SCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPDAIGRILNDYPGMAGSHRLAFDGLVQAGKLRRSRPVLGKLDSSSRETPSANHDSDLPPGCIIVDRNP----------------------------------LPVALSTAAG--GGSGADPATTSKGAAKPLLAARAPAEQA-----SDCDGVVATDRSPPTVS-----------TXXXXXXXXVASSGTTSETR-------EGLSRTLDVTTTQ----GVAPA---------------------GARPT---VRYNSGPTFRKARGRKRKALLDPSEVTEGSVVGGKELEALLKDATLQQASLKNYLRAVLAVQHGCVRGSIPVWRQAGGKKSRKTAAANSTGDGLREQLAESEETGRAALSTCSTQDLACYIVVLLDARRQ 3774
P P R++T G A RW R H A T R P++SVV+S R V +DPAQEDVVLLDL+TPAILLTAGAGTGKTHTLAARLARILGVEPRRP +LSV+N AV G A RL R H G+EG G G +V AHAAAPESVLVLSFT QGAQDVRER IAVGVPRAQADRVWAATFHSFAATVLKQN HL+W ES S +G S AS GLD+IGHAEQV LVAR+LAD W+S DDLAA Y G+ AFEG W + S GSWGMPPTKEERG+E A+RRKE ETRAK VL+RI +WKE+GITV++ R N++ DD+TD AA +Y +YQ+ LR RRQVDFGDLC+M TELFTRHPEVLERYRWR RH+LVDEYQDTSPAQQRLL+ALV G+PS R T S L+ H GLGVSLFCAGDEDQHIYGWRGTTVDHLHR EDFPGAVRCALTETHRLPVH+LRSATGLMRAGGLVPLLNRRMRTKQHTPGAVV+AQGLWNSREEGKWV++EA KMNREQGISYKDMAVIARTAYNTRELEE+LAARGVPYTVEGGSSFFSR EVQAPLALLALCANPQDD AFR+F+SLRS+TRLL WATP+ MRG+GELAVA+GVSYAEGVRLSVSRGL+K E++S FIYGLRRW+SLLMGW +LHE ERGAAVWRI WEAGFLPRP DAS A G GG +QE++ +LA AASRCDH+GRFLLRA RAREETAN++AARK GRGGRWEG TG ++KQ + S ED+LEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGD +H VESLER+QEERRLGYVALTRAS+N IITFSKKRRF ++W++SAGPSRFLLEMPTEYVEV PDAIGR LNDYPG AG+HRLAF G+++AGKLRRSRPVL ++ DLP GC I++RNP L A A G GGS + T S A A +E + S +G D SPP S + +AS G E + E T V TQ G+AP GA P +RYN GPTFRK+RGR+RKALLDPS +T VVG EL ALL D++LQQASLKNYLRAVLA+QHGCVRGSIPVWR GGKK+ K AA+ S LR LAESE TGRAALSTCS QDL YIV LLDAR +
Sbjct: 9 PRPTARRLTALQLGTKTASAAAAA--GRWKRHRRGHWSRAAGTRRGHPLSSVVHSG---------------------------RASVLLDPAQEDVVLLDLETPAILLTAGAGTGKTHTLAARLARILGVEPRRPTELSVDNLTAVEKAGAGIGAGVGRLGRLHV-FGDEGGAGKGGLWGHRRVAAHAAAPESVLVLSFTKQGAQDVRERAIAVGVPRAQADRVWAATFHSFAATVLKQNGHLLWPESEESDLGWSAASSRRRATFGLDMIGHAEQVDLVARILADSDRGGWDSRDDLAAASYKGDAAFEGPWSATAGGRSNGSWGMPPTKEERGKETAQRRKELETRAKTVLSRIGVWKEQGITVEEHRSTNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFGDLCLMVTELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFGAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYGLRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLPRPVDASFAPHRGGGGG--------PDQESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAGTHRLAFHGMIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNPALALASSDFVKPHHKSAEASDLDAAKASDGKGNSLLEAARRAVGEVGGSASKGTTPSSSVADDSAGAAGQSETSTIPPTSALNGRPTRDESPPPRSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKTERSGRKESRVDTAKVAGTQPEAPGMAPVPFGRAGEPSSPGRPQHRQAGEGAAPKASPLRYNPGPTFRKSRGRRRKALLDPSGITAEEVVGADELLALLGDSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGGKKAAKGAASTSGKAALRGGLAESEATGRAALSTCSAQDLTNYIVTLLDARNK 1314
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A6H5JUX3_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX3_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 3.580e-179 Identity = 297/449 (66.15%), Postives = 334/449 (74.39%), Query Frame = 1
Query: 1147 VDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGT----SXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHED--FPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTFIYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPRPADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAR 2475
++ DD+TD AA +Y +YQ+ LR RRQVDFGDLC+MATELFTRHPEVLERYRWR RH+LVDEYQDTSPAQQRLL+ALV G+PS R T S L+ H GLGVSLFCAGDEDQHIYGWRGTTVDHLHRH F G L P R+A +R G P +RR R + Q REEGKWV++EA KMNREQGISYKDMAVIARTAYNTRELEE+LAARGVPYTVEGGSSFFSR EVQAPLALLALCANPQDD AFR+F+SLRS+TRLL WATP+ MRG+GELAVA+GVSYAEGVRLSVSRGL+K E++S FIYGLRRW+SLLMGW +LH+ ERGAAVWRI WEAGFLPRP DAS AS G G VG S++TK+QE++ +LA AASRCDH+GRFLLRA RAR
Sbjct: 1 MEADDYTDAAAAAVYPSYQQHLRRRRQVDFGDLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRASSATPASISPDPAVAMSEGEDGECFDAAGTGKGEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVRGRFSGGREVRLDGDP--PPTRARAA---VRDG---PHASRRARAPSQPTD---EDQAAHARREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYGLRRWASLLMGWQRLHDAERGAAVWRIFWEAGFLPRPVDASFASHRGGRRGPVGGSRMTKDQESIGKLATAASRCDHIGRFLLRAARAR 438
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A5C8PCV3_9HYPH (DNA helicase n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PCV3_9HYPH) HSP 1 Score: 242 bits (617), Expect = 1.660e-62 Identity = 216/768 (28.12%), Postives = 327/768 (42.58%), Query Frame = 1
Query: 634 AAPESVLVLSFTNQGAQDVRERV-IAVGVPRAQADRVWAATFHSFAATVLKQNRHLVWAESSPMGSSHASGLDIIGHAEQVGLVARLLADPHSDEWNSHDDLAAPFYGGEQAFEGSWLSSGGSWGMPPTKEERGQEAARRRKESETRAKAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGL-----PSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPG--LGVS-LFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTF---IYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPR-PADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPDA 2895
A P +L ++FTN+ A+++ ERV A+G AD +W TFHS +L+++ LV +S+ I+ +QV L+ +LL E DD P A+ + I WK++ + + D + D A IY YQE LR DFGDL ++ LF +HP+VL Y R R+ILVDEYQDT+ AQ L+ L +G P +G G G S + C GD+DQ IYGWRG V ++ R E DFPGA L +R H+L +A+ L+ L + + T+ G V+ +G+W+ EE + + E + RE+ + +++A++ R A+ TRE EE GVPY V GG F+ R E++ LA L + P DD+AF + ++ R + ++ + ++ + VS E R ++ ++ + T + RW S+L G + + E +L E+G+ D S + G + E + +L A +++ FL E N D + +MTMH AKG EF VFL GW+EG FP D+ + L+EERRL YVALTRA +N ++F+ RR N W +A PSRF+ E+P ++E DA
Sbjct: 85 AWPGQILAVTFTNKAAREMLERVGAAIG---QAADGLWLGTFHSIGVRILRRHAELVGLKSN---------FTILDTDDQVRLIKQLL------EAEGVDDKKFP------------------------------------------ARILSGIIQRWKDRAQGPDQVGTGD-DQAEFADGRAVEIYRQYQERLRAVNAADFGDLVMLCVSLFQQHPDVLAEYHRRFRYILVDEYQDTNVAQYLWLRLLAQGAQTSLPPEGEGAPQGRKGDARTDSMSPSGADSVAPSPFRRSAPPSPSGGRTTGASNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAQIIRLERNYRSTPHILAAASHLIAHNE--GRLGKTLWTESKE-GDKVRLRGVWDGDEEARVIGEEVEALQREKH-ALREIAILVRAAFQTREFEERFMTLGVPYRVVGGPRFYERQEIRDALAYLRVVVQPDDDLAFERIYNVPKRG-----LGDSTLKTLRDIQKTQRVSLFEAARRALETDELRPQARKTLGGLVKNFERWRSMLDGMSHIEVAET------LLDESGYTEMWQRDRSPEAPGRL--------------ENLKELINALQEFENLQGFLEHVALVTEGNQNSNG----------------------------DMVTIMTMHAAKGLEFDTVFLPGWEEGLFPNQRALDDK-----GVSGLEEERRLAYVALTRARRNVHVSFAANRRVFNQW-QAAIPSRFIGELPEAHLEASSDA 728
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A5C5S9A4_9HYPH (DNA helicase (Fragment) n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5S9A4_9HYPH) HSP 1 Score: 239 bits (611), Expect = 3.100e-62 Identity = 220/771 (28.53%), Postives = 332/771 (43.06%), Query Frame = 1
Query: 634 AAPESVLVLSFTNQGAQDVRERVIAVGVPRAQADRVWAATFHSFAATVLKQNRHLVWAESSPMGSSHASGLDIIGHAEQVGLVARLLADPHSDEWNSHDDLAAPFYGGEQAFEGSWLSSGGSWGMPPTKEERGQEAARRRKESETRAKAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQ---RLLQALVKGLPSTRS--------VVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVS-LFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTF---IYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPR-PADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPDA 2895
A P +L ++FTN+ A+++ ERV A + +A AD +W TFHS +L+++ LV +S+ I+ +QV L+ +LLA DD P A+ + I WK++ T + + D + D A IY YQ L DFGDL + LF +HP+VL Y R R+ILVDEYQDT+ AQ RLL +G P+ RG ++ S + C GD+DQ IYGWRG V ++ R E DFPGA L +R H+L +A+ L+ L + + T++ T G ++ +G+W+ EE + + E + RE+ + +++A++ R A+ TRE EE GVPY V GG F+ R E++ LA L + P DD+AF + ++ R L +T +R I + + VS E R ++ ++ + T + RW ++L G + + E +L E+G+ D S + G + E + +L A +++ FL + E N D + +MTMH AKG EF VFL GW+EG FP D+ L L+EERRL YVALTRA KN ++F+ RR N W +A PSRF+ E+P +++E DA
Sbjct: 82 AWPGQILAVTFTNKAAREMLERV-AAAIGQA-ADGLWLGTFHSIGVRILRRHAELVGLKSN---------FTILDTDDQVRLIKQLLAA------EGIDDKKFP------------------------------------------ARILSGIIQRWKDRAQTPDKVSTGD-DQAEFADGRAVEIYRQYQARLLAVNAADFGDLVMHCVTLFQQHPDVLADYHRRFRYILVDEYQDTNVAQYLWLRLLAQKTQGTPAAHDSSLPPXXXXSRGRVGEGGPQAPHAGVEAPRPSPPPQGGRGHEERLAPSASNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAAIIRLERNYRSTPHILAAASTLI--ANNEGRLGKTLWTEE-TEGEKLRLRGVWDGDEEARVIGEEIEALQREKH-ALREIAILVRAAFQTREFEERFMTLGVPYKVVGGPRFYERQEIRDALAYLRVVQQPDDDLAFERIYNVPKRG--LGESTLKTLRDIQK---TQRVSLFEAARRALETDELRPQARKTLGDLVKNFERWRTMLDGISHVEVAET------LLDESGYTEMWQRDRSPEAPGRL--------------ENLKELINALQEFENLQGFLEHVSLVTEGNQNANG----------------------------DMVTIMTMHAAKGLEFDTVFLPGWEEGLFPNQRALDDK-----GLSGLEEERRLAYVALTRARKNVHVSFAANRRVFNQW-QAAIPSRFIGELPQDHLEASSDA 729
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A4R6WKV6_9PROT (DNA helicase n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WKV6_9PROT) HSP 1 Score: 224 bits (571), Expect = 1.870e-57 Identity = 186/610 (30.49%), Postives = 274/610 (44.92%), Query Frame = 1
Query: 1072 AKAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVK---EEEASTFIYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPR-PADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQ 2886
++ VL I WK++G+T + ++ + +Y AYQ+ L DFGDL + +F + P+ L RY+ + R+ILVDEYQDT+ AQ L+AL + +H ++ C GD+DQ +YGWRG V+++ + E DFPGA L + +R H+L +A+GL+ L + + T + G V+ G W+ EE + + E + R +G KD+A++ R + TRE EE G+ Y V GG F+ R E++ LA L L P D +AF + V+L R ++ + ELA A+ VS E R V+ +K +F+ + RW L LH E V L E+G+ AD S+ + G + E + +L A D + FL + E + D L +MT+H AKG EF VVFL GW+EG FP P S DE+ + + L+EERRL YV LTRA + AII + RR N W N+ PSRFL E+P ++E Q
Sbjct: 151 SRVVLGIIERWKDRGLTPDKVS--RAEMAEVASGRILDLYHAYQQRLLTLNACDFGDLLLHNLTIFQKAPDQLARYQSQFRYILVDEYQDTNVAQYLWLRALAQ-----------------------------------------QHK----NICCVGDDDQSVYGWRGAEVENILKFEKDFPGATIIRLEQNYRSTPHILAAASGLIAHNE--GRLGKTLWTDVNE-GEKVRVLGAWDGAEEARQIGDEVETLQR-RGTELKDIAILVRAGFQTREFEERFITLGISYRVIGGPRFYERQEIRDALAYLRLIHQPDDGLAFERIVNLPRRG-----IGDTTLKQLNELARAQSVSVPEVARQVVTTDELKPAARRALGSFMNDVARWRGLAQ---TLHHAELTQIV---LDESGYTAMWQADKSIEAPGRL--------------ENLKELVRALEDFDSLEGFLEHVSLVMENAES----------------------------GPRDQLSIMTLHGAKGLEFDVVFLPGWEEGLFPH-PRSLDENGI----KGLEEERRLAYVGLTRARRLAIICHAGSRRIHNQWQNAL-PSRFLAELPAAHIERQ 650
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: UPI0005939E31 (UvrD-helicase domain-containing protein n=1 Tax=Neomegalonema perideroedes TaxID=217219 RepID=UPI0005939E31) HSP 1 Score: 224 bits (570), Expect = 5.320e-57 Identity = 233/865 (26.94%), Postives = 344/865 (39.77%), Query Frame = 1
Query: 346 DPAQEDVVLLDLDTPAILLTAGAGTGKTHTLAARLARILGVEPRRPADLSVENQPAVSGGAEGNAARLDRPHARVGEEGTGQWDGCRGGGQVGAHAAAPESVLVLSFTNQGAQDVRERVIAVGVPRAQADRVWAATFHSFAATVLKQNRHLVWAESSPMGSSHASGLDIIGHAEQVGLVARLLADPHSDEWNSHDDLAAPFYGGEQAFEGSWLSSGGSWGMPPTKEERGQEAARRRKESETRAKAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEA----CKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEAST-----------FIYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPRPADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPL---LPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEV 2883
+P +E V LD +L+ AGAG+GKT L ARLA ++ RP++ +L ++FTN+ A+++RERV + + A W TFHS AA +L+++ LV SS I+ +QV L+ +++ DE + AK + A I WK +G+T + + + DD A +YA YQ+ LR DFGDL + + HP+VLER+R RLR++LVDEYQD++ AQ L+ L G H + V GD+DQ IYGWRG V ++ + E DFPGA L E +R +L +A ++ G L + + T Q+ G+ V+ GL++ EE +WV E + R I A++ R ++ R EE A G+PY V GG F+ R E++ +A L L A P D +AF + V+L RG+GE + + +S SR +K ++ F + RW + KL +E A V L E+G+ A G A G + N K + ++ +HV ++ A+R D + L +MT+H AKG E+ +VFL GW+EG FP L SG + L+EERRL YV +TRA K I+F+ RR N W SA PSRF+ E P +E+
Sbjct: 43 EPQREAVETLD---GPVLVLAGAGSGKTRVLTARLAHLIATGRARPSE-----------------------------------------------------ILAVTFTNKAAREMRERVGRI-IGEAVEGMPWLGTFHSIAAKMLRRHAELVGLTSS---------FAILDADDQVRLLKQVILAEGIDE------------------------------------------------KKFPAKNLAALIDGWKNRGLTPE--KLPKGEGDDFAQGKGAKLYALYQDRLRTLNAADFGDLLLHMLTILQSHPDVLERFRERLRYLLVDEYQDSNIAQYLWLRLLAGG-----------------------------------------HKNICV----VGDDDQSIYGWRGAEVGNILKFEKDFPGATVIRLEENYRSTPEILAAAGAVI--SGNQARLGKTLWT-QNPSGSKVRLMGLYDGDEEARWVGEEIEAYMAGLGRRAKIGLNQTAILVRASHQMRAFEERFLAIGLPYRVIGGPRFYERQEIRDAIAYLRLVAQPDDGLAFERIVNL-------------PRRGVGEQTLQAIHQQSRFDNVSPSRAALKMAQSGEIGGKARGTLILFFEAMSRWRAEA---EKLTPSELAALV---LDESGYTAM----WKADKGADAPGRLDNLK--ELVRSIGDFPTLQGFLEHVS-LVMEASR--------------------------------DGEGAGERLTLMTLHAAKGLEYDLVFLPGWEEGLFPSQRSLDESGRQG--------LEEERRLAYVGMTRARKILNISFAANRRIYNQW-QSALPSRFIDETPPAVMEI 676
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A848V8E6_9PROT (DNA helicase n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V8E6_9PROT) HSP 1 Score: 223 bits (568), Expect = 6.070e-57 Identity = 233/868 (26.84%), Postives = 343/868 (39.52%), Query Frame = 1
Query: 343 MDPAQEDVVLLDLDTPAILLTAGAGTGKTHTLAARLARILGVEPRRPADLSVENQPAVSGGAEGNAARLDRPHARVGEEGTGQWDGCRGGGQVGAHAAAPESVLVLSFTNQGAQDVRERV------IAVGVPRAQADRVWAATFHSFAATVLKQNRHLVWAESSPMGSSHASGLDIIGHAEQVGLVARLLADPHSDEWNSHDDLAAPFYGGEQAFEGSWLSSGGSWGMPPTKEERGQEAARRRKESETRAKAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRG---LVKEEEA--------STFIYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPRPADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPD 2892
++P Q D VL A+L+ AGAGTGKT L RLA IL A G A P +L ++FTN+ A+++RERV G+P W TFHS AA +L+ + LV +SS I+ +Q+ L+ +++ + DE A G WK KG+T + R + +Y YQ+ L+ DFGDL + +FT++P++L+RY + R+ILVDEYQDT+ Q L+ L +G + L GD+DQ IYGWRG VD++ R E DFPGA L +R H+L +A+GL+ A L + + T G +V G+W++ E + +S E + G Y D+A++ R + R EE A G+PY V GG FF R E++ A L L + DD+AF + +++ R GIG+ +V + A + S+ LVK +E F+ L+RW + T + ER IL E+G+ D A G E + +L A S + + +L + + + Q ED + +MT+H AKG EF +VFL GW+EG FP S DE+ L L+EERRL YV LTRA + A I F+ R+ SW +S PSRF+ E+P ++V + +
Sbjct: 38 LNPEQRDAVLATEG--AVLVLAGAGTGKTRVLTCRLAHIL---------------------ANG--------------------------------LAYPSQILSVTFTNKAAREMRERVGDLIGETVEGLP-------WLGTFHSIAAKILRIHAELVDLKSS---------FTILDTDDQIRLLKQVIRAENIDEKRWTPRFLASLIDG------------------------------------------------WKNKGLTPDKLNSRQSF--KFAEGKGGKLYKIYQDRLKVLNACDFGDLLLHNITIFTKNPDILQRYHKKFRYILVDEYQDTNVCQYLWLRLLAQGTGN---------------------------------------------LCVVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVVKLERNYRSTAHILGAASGLITANQ--DRLGKTLWT-DIDGGDLVTVTGVWDAPAEARNISNEIENW-KSCGRLYNDVAILVRASRQMRAFEERFIALGLPYRVIGGPRFFERQEIRDAHAYLRLIVSETDDLAFERVINVPKR-------------GIGQTSVQKLQMAARAMNRSLEHATSELVKTDEIRGKARTSLKAFLLDLQRWRADSKSLTPVDLAER------ILDESGYTQMWRDNKDAKSQG-------------RLENLKELIQAISEFETLPAYLEHVSLVLDIESGPQ----------------------------EDEISLMTLHAAKGLEFPLVFLPGWEEGIFPSQ-KSLDEN----GLAGLEEERRLAYVGLTRARERAKIYFAANRQVYGSWQSSI-PSRFIDELPPDHVTAESE 669
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A2D8HLB6_9PROT (DNA helicase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2D8HLB6_9PROT) HSP 1 Score: 218 bits (554), Expect = 3.120e-55 Identity = 172/609 (28.24%), Postives = 273/609 (44.83%), Query Frame = 1
Query: 1075 KAVLARITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHED-FPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTFIYGLRRWSSLLMGWTKLHE-TERGAAVWRILWEAGFLPR-PADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPD 2892
+A+ A I WK+KG+ + + D Y YQ+ L + DFGDL + LF +HP++L Y+ R ++ILVDEYQDT+ AQ LL+ L + +H ++ C GD+DQ IYGWRG V ++ + ED FPGA L +R H+L +A+GL+ L + + T+ + GA V + W+ + E +WV+ E + R+ G KDMA++ R ++ TR+ EE + G+ Y V GG F+ R E++ LA L + P DD+AF + +L R A+ + E+ G+S + +V +G K + S+ L+ S W + V +L ++G+ D S + G ++E + +L A + + +FL + E A++ +D + +MT+H AKG E+ V+FL GW+EG FP + DE+ V + L+EERRL YV +TRA K I+ + RR W +S PSRF+ E+P E++ Q +
Sbjct: 158 RAMAAIIDRWKDKGLRPDQVS--GTGGSEFADGKGIAFYKRYQQRLAEQNACDFGDLLLHVLTLFQKHPDILSLYQQRFKYILVDEYQDTNVAQYLLLRLLAQ-----------------------------------------RHR----NICCVGDDDQSIYGWRGAEVGNILKFEDDFPGARVIRLERNYRSTSHILGAASGLIAQNE--GRLGKTLYTEDNE-GAPVTLKSHWDGQSEARWVAEEIEALERK-GTRTKDMAILVRASFQTRDFEECFLSLGIKYRVIGGLRFYERREIRDVLAYLRVINQPDDDLAFERIYNLPKRG-----LGERALEKLREIGRGAGLSLSRAADFAVEQGFFKGKAHSS----LKELSENFHNWRAQQDLVATDELVETVLEDSGYFDMWQQDTSTEAEG--------------KRENLKELIRAVGEYESLSQFLEHVSLVMENNADKG----------------------------DDMVSLMTLHAAKGLEYDVIFLPGWEEGLFPHQ-RALDENGV----KALEEERRLAYVGITRAKKRCFISHASNRRIHGQWQSSL-PSRFVDELPKEHIADQSE 658
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A7D5RY45_9PROT (DNA helicase n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5RY45_9PROT) HSP 1 Score: 217 bits (552), Expect = 6.540e-55 Identity = 185/633 (29.23%), Postives = 276/633 (43.60%), Query Frame = 1
Query: 1093 ITLWKEKGITVQDIRFRNVDLDDHTDTPAAFIYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQRLLQALVKGLPSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAV---VQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTF---IYGLRRWSSLLMGWTKLHETERGAAVWRILWEAGFLPR-PADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPDAIGRILNDYPGMAGSHRLAFDGLVQ 2967
I WK++ +T R + + D D A +Y YQ+ LR DFGDL + LF HPEV +Y+ + R++LVDEYQDT+ AQ L+AL G H +L C GD+DQ IY WRG + ++ R E DFPGA L +R H+L +A+ L+ R+ TPG V + +W+ +E + V E + R QG + ++MAV+ R + TRE EE L G+PY + GG+ F+ R E++ +A + P DD+AF + V+ R PA++RG+ LA + G+S E ++ +K + +TF + L RW +L IL E+G++ AD S + G + E + +L AA + + + FL + + D + +D + +MT+H AKG EF VFL GW+E FP + DE L+EERRL YV LTRA A I+F+ R +W + PSRF+ E+P ++V VQ A G D G R + + V+
Sbjct: 167 IQRWKDRXLTPD--RVTDAEGADAIDRQALPVYQDYQDRLRTVNACDFGDLLLHGLTLFREHPEVAAKYQRQFRYLLVDEYQDTNVAQYLWLRALAHG----------------------------------------HH-----NLCCVGDDDQSIYSWRGAEIGNILRFERDFPGAQVIRLECNYRSTPHILAAASHLITHN------QGRLGKTLWTPGVXGEKVSVRAVWDGEDEAR-VVCEQIEALRGQGHALRNMAVLVRAGFQTREFEERLITVGIPYRIVGGARFYERQEIRDAIAYFRIVVQPADDLAFERIVNTPKRG-----LGPASLRGVHTLARSAGISLQEAASRLIATDELKPQARATFGRLLGDLARWRD------QLSAQPHPDVAMMILEESGYVAMWKADRSPEAAGRL--------------ENLKELVAALAEFESLPGFLEHVSLVMDN----------------------------DEIAGDDKVALMTLHAAKGLEFDTVFLPGWEEXXFPNQ-RALDESGAA----ALEEERRLAYVGLTRARVRANISFAASRLIYGTW-QTVMPSRFVRELPADHV-VQSTATGLFGVDMRRAPGGRRGSVEDDVE 685
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Match: A0A327KNP7_9HYPH (DNA helicase n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327KNP7_9HYPH) HSP 1 Score: 218 bits (556), Expect = 7.900e-55 Identity = 204/702 (29.06%), Postives = 300/702 (42.74%), Query Frame = 1
Query: 1186 IYAAYQEELRNRRQVDFGDLCIMATELFTRHPEVLERYRWRLRHILVDEYQDTSPAQQ---RLLQALVKGLPSTRSVVRGTSXXXXXXXXXXXXXXXXXXXXXXXXXXLDKHPGLGV---------SLFCAGDEDQHIYGWRGTTVDHLHRHE-DFPGAVRCALTETHRLPVHLLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVQAQGLWNSREEGKWVSMEACKMNREQGISYKDMAVIARTAYNTRELEESLAARGVPYTVEGGSSFFSRPEVQAPLALLALCANPQDDVAFRQFVSLRSRTRLLHWATPAAMRGIGELAVAEGVSYAEGVRLSVSRGLVKEEEASTF---IYGLRRWSSL--LMGWTKLHETERGAAVWRILWEAGFLPRPADASVASLGGMAGGAVGNSKITKEQETVIQLAAAASRCDHVGRFLLRATRAREETANQQAARKRRGGRGGRWEGITGGEEKQDSRSCEDSLEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDEDHVVESLERLQEERRLGYVALTRASKNAIITFSKKRRFQNSWVNSAGPSRFLLEMPTEYVEVQPDAIGRILNDYPGMAGSHRLAFDGLVQAGKL------RRSRPVLGKLDSSSRETPSANHDSDLPPGCIIVDRNPLPVALSTAAGGGSGADPATTSKGAAKPLLAARAPAEQASDCDG 3219
+YAAYQ L+ DFGDL + LF +HPEVL +Y+ R ++ILVDEYQDT+ AQ RLL G + V+R + G+ ++ C GD+DQ IYGWRG VD++ R + DFPGA L +R H+L +A+ L+ L + +R++ G V W+S EE + V E ++ R QG ++A++ R ++ RE E+ G+PY V GG F+ R E++ +A L L P DD+AF + V++ R AA++ + +LA A GV E R + VK + + + RW + + +L E + + +W+ R ADA+ E + +L + +++ FL E A D +++ +MT+H AKG EF VFL GW+EG LLP+ D + L+EERRL +V +TRA KNA I+F RR SW +S PSRFL E+P ++VEV+ G + G ++ FD G RR++ G + E D P + D V S A GGG+ GA KP A AP+ AS G
Sbjct: 203 LYAAYQARLKTLNAADFGDLLLETIRLFRQHPEVLRQYQTRFKYILVDEYQDTNVAQYLWLRLLAQRTSGTAAADLVLRDAALRAAPQDEAREEPASAISAPTPRPEEPAHSAGVSKDVAPLGPPKNICCVGDDDQSIYGWRGAEVDNILRFDHDFPGAKVIRLERNYRSTAHILGAASHLIAHNE--GRLGKTLRSEGEA-GERVVVSTAWDSEEEARAVGEEIEQLQR-QGHRLDEIAILVRASFQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDAMAYLRLVNQPADDLAFERIVNVPKRG-----LGDAALQNLHDLARARGVPLIEAARAMGTSEAVKPKPRAALRDLVAAFDRWRAQRDTLPHNELAEIVLDESGYTEMWQK---DRSADAA------------------GRLENLKELVRSMEEFENLQGFL-------EHVALVMDT---------------------DRGEDHEAVSIMTLHAAKGLEFDTVFLPGWEEG---LLPHQRSLDENGRA--GLEEERRLAHVGITRARKNARISFVSNRRIHGSWTSSL-PSRFLDELPEQHVEVREAKGG-----FGGYGNAYGSRFDTTAAFGSSYTTPGWRRAQKSRGGFEEDPHEYSQVEPDE---PAGRMRD-----VGASRAPGGGT--------NGAFKPAAARPAPSFAASSASG 819 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig107.1038.1 >prot_C-linearis_contig107.1038.1 ID=prot_C-linearis_contig107.1038.1|Name=mRNA_C-linearis_contig107.1038.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1173bp MDFGELDGIMQTVLSPTSEPTRTGVSMDPAQEDVVLLDLDTPAILLTAGAback to top mRNA from alignment at C-linearis_contig107:307420..320315- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig107.1038.1 ID=mRNA_C-linearis_contig107.1038.1|Name=mRNA_C-linearis_contig107.1038.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12896bp|location=Sequence derived from alignment at C-linearis_contig107:307420..320315- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig107:307420..320315- >mRNA_C-linearis_contig107.1038.1 ID=mRNA_C-linearis_contig107.1038.1|Name=mRNA_C-linearis_contig107.1038.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7038bp|location=Sequence derived from alignment at C-linearis_contig107:307420..320315- (Chordaria linearis ClinC8C monoicous)back to top |