mRNA_C-linearis_contig107.1034.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig107.1034.1
Unique NamemRNA_C-linearis_contig107.1034.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: D7FMX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMX5_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 1.200e-101
Identity = 204/339 (60.18%), Postives = 234/339 (69.03%), Query Frame = 2 
Query:  140 MKFLRRESERGEFQQDG----GRPPQPSTSKKSTAMNAMNDSVHGSPEPTPVA----KSTAPPA-ASTPGSTTSDASSITTQTPDNVIGETLVVQGRVEFKKLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLHEVYVEGILIGDCSCTKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINPRDKVEKPRSRNAASRHKQQSRSQARTTEDTASRSSTSTLSPESIGKHAKT------RSRGSGDLRPEAIRPEGRSGGHGHSLSGDSATSSVNPTADDMPLPHPPMANGANGAIAGAGTSGDMVAPKLSSGDAV------KMPVRAAVPRPVHK 1093
            MKF RRESERG+FQQ G    GRPPQP++SK+      ++D+   SPEPTPVA     ++AP + ASTPG+ +SD ++ITTQTPDNVIGETLVVQGRVEF+ LLRIDGHFEGELIGNGSLIIGPTAEVISNLRGL+EVYVEGILIGDCSC KMQIRFAGCVTGNL CASLGMDPSVVLKGSANINPR+KVEK +S++AA RHKQ SRSQ R+ EDT+SR+STS LSPES+G    T      R+  SGDLRPE  RPE  + G GH                         A+G            D   PK+ +GDAV      K PV+     PV K
Sbjct:    2 MKFRRRESERGDFQQAGQQDVGRPPQPASSKR------VSDAFQASPEPTPVAVPIPATSAPQSTASTPGNKSSDTTTITTQTPDNVIGETLVVQGRVEFQNLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLNEVYVEGILIGDCSCNKMQIRFAGCVTGNLICASLGMDPSVVLKGSANINPREKVEKTKSKSAAPRHKQGSRSQTRSAEDTSSRASTSVLSPESVGSRGSTYDKQKRRASESGDLRPEGTRPEVGAAGTGHGREPSXXXXXXXXXXXXXXXXXXMSASGGK----------DKAGPKMPAGDAVSRSSAPKAPVQDGASAPVRK 324
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: D7G0L1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L1_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 4.020e-20
Identity = 47/105 (44.76%), Postives = 75/105 (71.43%), Query Frame = 2 
Query:  356 QTPDNVIGETLVVQGRVEFKKLLRIDGHFEGELIGN-GSLIIGPTAEVISNLRGLHEVYVEGILIGDCSCTKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANIN 667
            Q P++++ ETL ++G +EF +LLR+DG FEGELI + GSL++GP  EV+ +L+ + EVYVEGI+ G+     ++I+ AG + G++QC  L +DP+  ++ S N N
Sbjct:   89 QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNAGMLLGDVQCMCLTLDPTASIRVSINHN 193
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BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: F0Y5F7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5F7_AURAN)

HSP 1 Score: 100 bits (248), Expect = 3.980e-18
Identity = 44/103 (42.72%), Postives = 74/103 (71.84%), Query Frame = 2 
Query:  362 PDNVIGETLVVQGRVEFKKLLRIDGHFEGELIGNGSLIIGPTAEVISNLRGLHEVYVEGILIGDCSCTKMQIRFAGCVTGNLQCASLGMDPSVVLKGSANINP 670
            P+ VIGETL ++G++ F++LLR+DG FEGELI  G LI+GP  E++ +++ + ++ V G +IG+ +  ++++  +  + G++ C  L MDP+VVL G+ NINP
Sbjct:  359 PETVIGETLSIEGKLRFERLLRLDGKFEGELISEGDLIVGPQGELVGDVKTMSDIVVFGKVIGNIAVDRVELCGSASIYGDITCKVLLMDPTVVLVGNLNINP 461
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BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5JUC2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 3.530e-16
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQRR+LFAGAVARQPDGR PK
Sbjct:  123 GTYRQLSYAQALKRVGCQSVEATVRQRRVLFAGAVARQPDGRLPK 167
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.200e-16
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQRRLLFAGAVARQPDGR PK
Sbjct:  151 GTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPK 195
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.030e-15
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQRRLLFAGAVARQPDGR PK
Sbjct:  202 GTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPK 246
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 3.260e-15
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQRRLLFAGAVARQPDGR PK
Sbjct:  170 GTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPK 214
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5KF72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF72_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 8.470e-15
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQR LLFAGA+ARQPDGR PK
Sbjct:   32 GTYRQLSYAQALKRVGCQSVEATVRQRCLLFAGAMARQPDGRLPK 76
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5KLC4_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC4_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 9.510e-15
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQRRLLFAGAVARQPDGR PK
Sbjct:  292 GTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPK 336
[Close]
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.700e-14
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 2 
Query: 2114 GTYRQLSYAQALKMVGCQSVEATVRQRRLLFAGAVARQPDGRFPK 2248
            GTYRQLSYAQALK VGCQSVEATVRQRRLLFAGAVARQPDGR PK
Sbjct:  453 GTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPK 497
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMX5_ECTSI1.200e-10160.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G0L1_ECTSI4.020e-2044.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0Y5F7_AURAN3.980e-1842.72Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6H5JUC2_9PHAE3.530e-1693.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JLH5_9PHAE9.200e-1695.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX9_9PHAE2.030e-1595.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWS4_9PHAE3.260e-1595.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KF72_9PHAE8.470e-1591.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLC4_9PHAE9.510e-1595.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA81_9PHAE1.700e-1495.56Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:246042..255826 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.0
Seed ortholog evalue3e-88
Seed eggNOG ortholog2880.D7FMX5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Polymer-forming cytoskeletal
EggNOG OGs2RXV0@2759,COG1664@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2249
Cds size957
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927407.5498762-UTR-C-linearis_contig107:246041..2461801622927407.5498762-UTR-C-linearis_contig107:246041..246180Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 246042..246180 +
1690879683.4632514-UTR-C-linearis_contig107:246041..2461801690879683.4632514-UTR-C-linearis_contig107:246041..246180Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 246042..246180 +
1622927407.6513636-UTR-C-linearis_contig107:254673..2558261622927407.6513636-UTR-C-linearis_contig107:254673..255826Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 254674..255826 +
1690879683.5600545-UTR-C-linearis_contig107:254673..2558261690879683.5600545-UTR-C-linearis_contig107:254673..255826Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 254674..255826 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927407.5634484-CDS-C-linearis_contig107:246180..2461941622927407.5634484-CDS-C-linearis_contig107:246180..246194Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 246181..246194 +
1690879683.4766757-CDS-C-linearis_contig107:246180..2461941690879683.4766757-CDS-C-linearis_contig107:246180..246194Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 246181..246194 +
1622927407.5765822-CDS-C-linearis_contig107:246538..2466531622927407.5765822-CDS-C-linearis_contig107:246538..246653Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 246539..246653 +
1690879683.4882867-CDS-C-linearis_contig107:246538..2466531690879683.4882867-CDS-C-linearis_contig107:246538..246653Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 246539..246653 +
1622927407.589727-CDS-C-linearis_contig107:247060..2472381622927407.589727-CDS-C-linearis_contig107:247060..247238Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 247061..247238 +
1690879683.4975202-CDS-C-linearis_contig107:247060..2472381690879683.4975202-CDS-C-linearis_contig107:247060..247238Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 247061..247238 +
1622927407.605804-CDS-C-linearis_contig107:247628..2477051622927407.605804-CDS-C-linearis_contig107:247628..247705Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 247629..247705 +
1690879683.5068805-CDS-C-linearis_contig107:247628..2477051690879683.5068805-CDS-C-linearis_contig107:247628..247705Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 247629..247705 +
1622927407.61709-CDS-C-linearis_contig107:253125..2532511622927407.61709-CDS-C-linearis_contig107:253125..253251Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 253126..253251 +
1690879683.518523-CDS-C-linearis_contig107:253125..2532511690879683.518523-CDS-C-linearis_contig107:253125..253251Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 253126..253251 +
1622927407.6274338-CDS-C-linearis_contig107:253869..2539591622927407.6274338-CDS-C-linearis_contig107:253869..253959Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 253870..253959 +
1690879683.5270617-CDS-C-linearis_contig107:253869..2539591690879683.5270617-CDS-C-linearis_contig107:253869..253959Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 253870..253959 +
1622927407.6387784-CDS-C-linearis_contig107:254316..2546731622927407.6387784-CDS-C-linearis_contig107:254316..254673Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 254317..254673 +
1690879683.5397024-CDS-C-linearis_contig107:254316..2546731690879683.5397024-CDS-C-linearis_contig107:254316..254673Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 254317..254673 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1034.1prot_C-linearis_contig107.1034.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig107 246181..254673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig107.1034.1

>prot_C-linearis_contig107.1034.1 ID=prot_C-linearis_contig107.1034.1|Name=mRNA_C-linearis_contig107.1034.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=319bp
MKFLRRESERGEFQQDGGRPPQPSTSKKSTAMNAMNDSVHGSPEPTPVAK
STAPPAASTPGSTTSDASSITTQTPDNVIGETLVVQGRVEFKKLLRIDGH
FEGELIGNGSLIIGPTAEVISNLRGLHEVYVEGILIGDCSCTKMQIRFAG
CVTGNLQCASLGMDPSVVLKGSANINPRDKVEKPRSRNAASRHKQQSRSQ
ARTTEDTASRSSTSTLSPESIGKHAKTRSRGSGDLRPEAIRPEGRSGGHG
HSLSGDSATSSVNPTADDMPLPHPPMANGANGAIAGAGTSGDMVAPKLSS
GDAVKMPVRAAVPRPVHK*
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mRNA from alignment at C-linearis_contig107:246042..255826+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig107.1034.1 ID=mRNA_C-linearis_contig107.1034.1|Name=mRNA_C-linearis_contig107.1034.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9785bp|location=Sequence derived from alignment at C-linearis_contig107:246042..255826+ (Chordaria linearis ClinC8C monoicous)
CCCCACTCATCTCTCAGCTGTCTCAAAAAATTTCAAGATCTCGCCTTGGG
AGTTCGGCGTGCATCCTCCAGAAACCCTCTGCCCACCTCCCTCTGGAACG
CCCTCTACACGTAGAACATATACTTTTCGTCGCCCAAGCATGAAATTCCT
GAGGTGTGTGAGGACAAACAAATACATAAAACTGGTACTCTCTAACTGAC
CCGATATTCCGCGATATTTACTGGCGGTGATTTGAGGAGGCGTGGTGGTC
TCGCACTCTCGGGGCACATGAACCCTTCCTCCCACGTGTGGCGGACTAGA
GCGTACAACGGGGTGGTTTCCAGTGGGCTTCGACTGATGTCTGTTGGCAT
GAAACGCAGGATAGAGATTTAGAATTGAAGAGTGAAGACTGGACAACGTA
TGTATGTACAAGATGCCCACCCGTTCTCTTCTCCGAAACTCTGCTTTTGT
CTGTTTGAGGTTCCACTGACCAACTCCTTTTTGCTTTGTGTGGGCAGGAG
GGAATCAGAGCGTGGAGAGTTTCAGCAAGACGGTGGGCGGCCGCCACAGC
CATCCACATCCAAGAAGTCTACGGCCATGAATGCCATGAATGACTCGGTG
CACGGTTCACCGGTGAGAGGACTTTTAGAAAATGCGCCGATTTTCGCACA
TCTACTGCTGCTGCTGTTAACCCGAAAACAGCGTTGTTTCCGTTTCCATC
TCCACTGCCAAACGCCCCAGGTTCCTGTTCTCTAGCGGATGAGTGATGCA
AAGTGTGATATCCGAACCCTTGTGAACCAAGCGTGGTACAAAGTTTCCTG
CCCGTTGAGGGTTTTACACATTCTACCGCGGAGCATGCGATGCAAATACA
ATACGACGGACGCCTCTCACAAAAAACGCCCGTCACTTGTAGACCATGGA
GTCTAATCTAGTGGACCATGTTTTCTCTGCACTTTTTTTGCTACTCCGGA
GAATTTTGCTAGCTTGTACTGGTCACATTCGCAACAAACCCGGCGGGTGC
CGGTGTAAATGTAAATTAGGAGCCAACACCGGTGGCCAAGAGCACTGCTC
CCCCAGCGGCGTCAACCCCTGGCAGCACTACGAGCGACGCGTCGAGTATC
ACAACCCAAACGCCAGACAATGTGATTGGCGAGACGCTGGTTGTCCAAGG
CCGCGTGGAGTTCAAGAAATTGCTGAGGATCGACGGACACTTCGAAGGTG
CGTCTCTCTCACAAGAAGCCCTGTCCGTACCCCCGCAACACTTGACTGCT
GTAACCTTAGGTCCGGTACAACAAGGCATTGTGTGGCTACATATGGCGGT
GGTACTTCACTGGTTATGTTGATCATGAGCACGCATGCAGTCCAGTCCAG
ATCTACACGCGGGCTGCCTCTCTTTTTTCTTCCTGTAGTATTTGTCTTGC
CTGACTTTTGGGGCAGCACACATGGCTGTCGGGCACATCATTCGTGTTGT
GACGGCAGCCAACGGCAGTTTGCACTCTGTGTTGGGTGGCAATCAGCTCC
GCAACTTGTTTCTCCATCTTGCGTTACATTCTCTTCTAACCAGCTGCTTC
TAACAGGCTTCCTCCCGTGAATCGAATCGTAAAACAGGAGAGTTGATCGG
GAATGGAAGTTTGATCATCGGCCCGACCGCCGAAGTGATCTCCAACCTTC
GGGGACTTCATGAGGTGGCACATATGTTTGTCTAGTTTGCGTTGTCGTAT
TCTTTCGCACGGTCGTTACCCACCAGCATCAATTTCTATCATGTGTCGTC
AAGCGCACCTCGGGTGAACTGCTGTTCACGAAACTCGTCTTCGGCATCGA
AAACAGAACTGGCAACCATAACCATCAACCTGCAGGGATCAGTTGTGATG
CAATCGCCCGCAGACTATACTGCTGTAGAGGCAGCTTGAAGAGAAGTCGT
TTTTACTACTCCGCAGTATTTACGATTTGCGATGGTGGACTGCGTTGTTG
ACACGACGAGACGCGAGAAAGAGAGGGTTTGGCAGTCATACTTTGTTGTG
CCACGGGACGAACGAACATATCGGATTTGGCAAGTTGTGTCTCGAGTACC
GTTAGTGTTCGAGCGATGGCACACCTGTGCGGTGCGCCTGTGCGATCGAT
TTTTAAATGATTTGAAACTGGCCTTTTTAGCGCACAGGGGTGCGATCTCT
CGGACCCTGTGCGGAATTTCAATTAAATATTTTGGTTCTGCTCGTCTAGC
GCGCACCCCTGTGCGATCTCTCCGGCGTGTGCGATGCTGATTAAATTATG
TTGATGGCACTGGTGCTCTCAACGCACAAGTTGCGGTCTGGTACCGATTC
CAATGAGAACTCAATCATTTTCAGTGCACGAGCACGCTTAATTAACACAG
GGTAGAGCCTCGATAATTTACAATACTGGGAAAATCAAATGGTACAGACA
CAAGCGTTGCAGCCGCGGGTGTGCCCCTGGGCGCATTCAAGTGGGAAAGG
GTCCGAGAGATCGCACCCCTGTGCCATCTCTCGGGCCCTGTTTGAAAATC
CAATATAATATGTCTACACTGGCTTTTTTTATCGCACAGGGGTGCCATCT
CTCCGCACTGCTGTGCCATCTCTCGAACACTTACGGTGTATGTATCCCTG
CCATGAAACTTCCTGGCGACCCCCTTTGCGGAGACTATTATCTGACATGA
TCAGTCATCATTGTCTTTCTCTTTCTCTTCTCCCCTCGTCTTTTTTCCGG
GGGCTGCGTCGTCCCGTCTCTGATTTGTTGTTGTTTGATAAAAGCCCTTG
AAGTTTAGGACGGCCATCTATTGTCGGAGCACCACCAAATCGGGTTATAG
AACGCCGTGCACTACTTTATTTTCTAGCTAATATTTTCGCCATCTCAAAG
GCCGACAGATAGGCGATCGGTGCCTTTGCTATTTTTCTGTTGTAAAACAG
CACGTTTCACAGAGTTGGACAGGCCCGATACGCCGCATACTTCGTATGAC
ATTGACATTTTGGTCGATATTTACAGCCTTTTTAAAATCGGAATCCACAC
GCGAAAAGGTCGCGGCTGTGCCCTTCAGCAGGTTCATTGTGGGTAGGTAT
CCTAGATATCAGTAGGTTTTTGAGACTGTCAACTGTGTTCCCAAGCTCTT
CAGCTTGGGCTCTCCAGCCGACTAAGCAAAATCCTCCGTCCGTTCGCATC
AAAACAAACACGCGAAGACGTTTTCCCAGTTTTAGGTGCTTTTCTTCTCC
ACCTATCCCATATCACGTCACTGTATTGAACTACTGTTAATCCACCACTC
AGCCACTTAGGGATTTGTCTCTTTGAGGGGAGGTTCTTTCTTTGATGCCG
TTTTTGTTTATAAAAAAACACGCGAAGCCCCACGAACGGTCGGGTCTCTC
AAGCCGATTTCAACTCACACTGGGAGTTTCCAGGAGATGCGAGTATATCT
GGGTAGCTTAGATATTTTCAAGCCCCCTCGTCGCGGTTTGAGCACCTCTC
GTCTGCTGGGGCGCGAGATACTGTGTATCGCGTATTCCGACACTTGTGGC
CGATTTACCCGTATGAGAGGGTATCTTGTGCCTTTTTCGACCCCTCACCT
CACGTCCTCGCGGAAAGCTATTGCTGCTGCTGCGCGCACTGCTACTGCTT
GCGTCTGTGTTAGTGTTATTCTGCACCCACCGCTGCACGGCTGCGATGCT
TGCTGTTGCCCCTCCATTTGACCATTTGATTCGTGCAGCCGTCGTGAACA
TTCATTCGCTGTTGCAAATATGCCGCAACCTGCCCAACCAACAACCCGGC
TATTTTCTACTGCTGCTGCTCCTTCTGAATCTTAGTATGTGGACTTTGTC
CACCAGAGATCTCTCGTGGTGCCTATTGTTCATGTGTCTCACGCGCGCGA
GCCAGAGGCTACAGCGCTTCGCGGTTTATGGTGTGGGTGTGATGCTCTAT
GTGCTGTGTGTCGTGTCGTGTGTGGGAGAGCGGGAGCGGAGCGCAACGAA
CATATAATTCGTATGTGTCTCGTCGGTGTGCCTCGGTGTCTAATTTAAGC
GTTGAATCAAGATGGCCGGAGTGGAATTTTCATTCTGCGATGTGTGTTGT
TCTACTCTGTACTACTGGGGTACGGATGGGGAGCGTGAAGTCTGCGTTTA
CAAGAGGGTGCTGAGAACGTGTGCTGTGCTTGGTTCTCGCGCATAAAAAA
CAAAAAAGAGTCAGTTTTTTTGGGTCCCCGAGTTTCCGATCGCTGCGGGG
GGGTGCGCTGGACCGAGAGAGTGGGGAGGCGACCAACATGCAAACATGCG
CACCTACCCACTCATAGATGGCCACGGAAACTCGCGGGCTCGACCGGGCA
AGTGGTACTCGAGTGCAAGGAGCACATAGAGCGAAGATGTTTGTCAAAGG
AGAGCCTTGAGAGAGCAGCAGCAGCAGCGGAGAGCATTTGCGGACGGATC
TACGGCAGTAGCGAACTACAGGGATGAAAGCTCAACGCGTGAGTAACTGC
CATGTATCCTGCATACACACCTTGCGTGGCTTCATGTCTTGCTGCATCTG
CTGGGTTCTCCGCCTTCGCTCTATATTTCAGTTCAAAAGCGGTGCCGTAG
GTAGCTTGCGCAAGATAACACCCCTCTTGCATCGATGCTTGCGCTGTCCA
CCCTACAACCACTATGCTGCTGTCTACTTCCTGTACAGTGTACTCCATGA
CAAGAAAGCTTTGCGGAGACCAAAACGTCCTCAGAAAGCTCGATGAGCTT
CAATGTAGTTTCCCTGGGGGAAATTTTGGGCAATGGCTCTCCCTCCTTTG
TGTGCATCATCAGTTGGGGTCTCGGGGGTGTGATATCGGTCGCAACACAG
AACGTTGTCTCTCTCAGGGTTGGCCTCTCGCACTCGTGGATTGCTGGACT
GCTGTACGCACTTGTCGTTGTAGTGAAACTTAAACTTTCAACATCTGTAT
GGATGCTTCCATTCGGCACACCCTCTCGAGCTCTCAAATTGTATGCGATT
GGAAGTTGTGCTCTGTTCGGTTGCTTCTCTCTCCTCTCTGTGTCCATCTA
TTGGTTATGTTTCGTCCATCTAGTGGGTAAGTCGAATAATTCTTAAGTCT
CTCACTTGCGACGGGCAAAAAAGGGCGTTTCGTGTGATTCTGATGACATG
ATACGGGGTTTCCCTTTGACAACACCTGCTGAAAACTACTTTGAGTTCCG
CTAAATTGTATTGCTAGCTCGCGGCAAACGGTAAACGAATATAGTCTAAA
TAGACGACTCGACGATCCTACAGCAGTAGAACCTCCCTACACCCAGCCGG
GTGTATGAGAGGCAACGACAGGACCGGCTCCTGTGCTCTTTGCGCGCCTA
TTCCCTACTGTTGTTGTGGGTTATTTGGTTATTTGTGTGCTGTGCTGTGC
TTTTGTTTTTTTGGCGTAACGCACGTATTTCTCCCCCATCTTGTACATGA
AACCTCACTCACCTCGTCTTCTTGCATTCTGATTATGATCGCCCTTTTTT
TCCCTTCCCGTTTTTGTTCATTTTCCAGACCACGTCGATCTTCGCCGACT
GATGACGGTCGTTCTTCGGTCATGTTCCGGCTAGGTGTTTACCGGATGAA
CCCATCTCAACGGTTTGGCCATTGTACACATTTGCTCTCCCGTTCCGTGC
CTCGGCAAGGCATGCTGCGAGGTGCTTCCTGCATGACCCAATGGGGGGGG
GTATTTCTAGCGAGCAAGGCTGGACTCGCGCTCGAGCGGATCGATTGAAA
CCTTGTTGCTTCTGCGGGCCTCACCGTGAGGCCCGCGTAGCGGTGGAGCT
AGGCCACTATTGGTGCGGACGGCAAGTGACCATGTGCGACTGGACTTTGC
TTGCGTGTGGACTCCGGAAACCGCACCGGACAGAATTTCTTTCGGTTTGT
CGACGTCTTTCGAACTCTTCACGACCAACCGATGACTCCGTCGATTATCT
TCACGATGGGGGCTTCCTATTCTTGGGTCGGGGTTTCGTATCATCTGGCG
CTAGGGGGATGCTCTAGGAACCACTTCGTCTCCCAAGCTCGGCTTCGAGG
AAGGTGGCATACTTGCGATTGCCCGAACGGAATGGGGTTGTTACTTCTGC
GGATGCCTACTACGACCCTGGCGGGAATGCTTCATCTTTTCAAATGCTAG
TGTTTTTGGCGACGTCGATGTGCGTGGCGACGCCGAGTATGTACAGGCCC
CCCTCTTCACAGCTAGGTCTGCAGACTCACAGCCCTTCTGGAGAGAATCG
ACCAAGTTCTGCTGTCATCGGACCTCCCTCTCCTTCACGACGAGACAGTT
GCTGTACCGACGGCTAAGACCGACATGTGCATAACGGACCCGCCAGCCCC
TCTGGGCGGACGTCGTAACATCTTTAGGGTTAGCGTTAGCCGGTTGTGTG
CTTCCCTCGCTTACGTGTTAACTTCTAGATCGATAGATGTCGGCGGTTCA
GGGACTCTAGCTTCTTGTCTGGCCACTTGCGTTAGCTTTCGGTCTCCTAC
CTTCTTTTGCATGGGTTTCGGTATTGGTCTCTATCTACGAAGTACCTCCG
TAAATATCTTTACTGTTTCCGTCTGGGACTTCCACTTGTAAATAAAAATC
TCGTCCACTGTAAATAAAGGAAAATGCGGCCACAGGGTCGGGTCTGGGCC
GGCCATAGACCGATGGCATTGCGCCCTGGGCGACTTGTGCATGGATGGCG
CAATACCCGTTGTTGGCCGGGTACGCTCCGGGTGAACCCGTTTTCGGCCA
TCGCTAAAGAAAACGGAGCTTGGGACCTGCAACGCCGACGATACTCGTCG
GATTGCTATTCAACGGAATAATAGCCTTCAGGAAACGAGGAAAAGGGAAA
GATGTGACATGGTCAAGACTCGTGCATACGCACCTACAAGCGACATGGAT
CACTACGGCAGTAATAGTTCAAAAGAATGTAATATCACTAGCTAAATATC
ACACCTGGTGGCATTCAATGGAGAACTGAAAGGCCCTTTTTTTTCGAGGC
AACAAACGCAAGAGAGGTTCGGGTGTTGTTATCTCTTTTGTGAGTGGCAG
TGGTCCCCCGTCCCGCGATCAGCAAGCGTGGTGAAAAGGAAGATGATTTA
ACGTAAGCATCAAATACCCCACCCTTTGTGTCAGGTCTACGTCGAAGGCA
TTTTGATCGGAGACTGCTCCTGCACCAAGATGCAGATTCGGTTCGCTGGG
TGTGTCACGGGCAACCTTCAGTGTGCTTCTCTAGGGATGGACCCCAGCGT
CGTTCTCAAGGTGGGCGGTTGTGTTTGTGTATGACACCCAAGTTTCATGT
AGCCATGTTAGGGCGAATCAATACGGCGTGGTGCGATCATATTCCCTCCC
CCACACCAAAAAAGCTATGAATAAAAATATAAACGGCATATTTTGTGTTC
GTTCGAATGACTCGATTTTTTCGTGCTTGATGCCCAGAACGTTGCTTCCC
GAAACATAATGATACCCTCTACTCTGTCGAAGTCCAGAGTCTCGCGAATG
GTAGCTTTACCCTATGTACCACGACAGGTAGATTGGCTTCCGTTTGTGTG
TCGTATGTATGTAGACCAGATGACGCGGCGAGGAGGTACCGACCGGGTCA
AGGTATGCTTGACCGACATTTTGGTCAAGTAAGGGCGATTCCGAGGGGGG
CAATGTGTGCCCTCACGTCTGGATCAGGACCCTCCGTCTTTCATAGGAGT
TGTGAATCTGTGCCTCGAAGGTATGTACAAAGTGTGTCACATTGGGTTTT
TGCCGGGGATCTCATTTCACCCTCCCTGATGCATAGTTTATAGGAGTATT
TTCAAGTATTCACAGTTGTACACGGTCCCGCAGATAGCAGTATAGCTCAC
GTGATGGTTGTCTTTTGTTTCTTCACAGGGAAGCGCCAACATCAACCCGC
GCGACAAGGTTGAAAAGCCCCGCTCCAGGAATGCGGCATCTCGCCACAAG
CAACAATCTCGATCGCAGGTAATGGCTGGTATGTGTGGTGAGACTCGGTG
CAAATGGGTTGTTAAATATAGCTCGTCGAAGCTTTTCAGCTCACGTGTGG
GGAATTATATCGCGTTCAAATGTCTCTTGTTTTCTACCAAATAATGGTGA
GCAGTTTACCGCGAACCTGAAAGTCGTTGTTGGGGGGTCTAGTGTAGACA
TAGAAGTGATCCTCCCTCACCGCCCTGCTACAATGGTGGGACAACCAGCA
ATCCGTTGCAGTGTAGCTTCTGGGTTTTCGGTTCAAATGTTTTACATTTC
TATAATAGGGCAGCACAGCAGTTTTGTGGTCGATTTGTACGGTGTCGCTG
TCTTTCTCCGATCCTCGTCGAACAGGCCCGGACGACGGAGGACACCGCGT
CGAGATCATCGACTTCGACACTCAGTCCTGAATCGATCGGGAAGCACGCG
AAGACACGGAGCAGGGGGAGCGGGGATTTGCGTCCTGAGGCAATTCGCCC
CGAGGGAAGGTCAGGGGGGCACGGGCATTCTTTATCGGGAGACTCTGCCA
CTTCGTCGGTCAACCCCACGGCCGACGACATGCCTCTGCCCCACCCTCCG
ATGGCTAACGGCGCCAACGGTGCTATTGCTGGTGCCGGCACTAGTGGAGA
CATGGTTGCACCTAAGTTGAGCTCGGGGGATGCCGTCAAGATGCCGGTGC
GGGCTGCCGTTCCGCGCCCAGTGCACAAATGACTGATGTGATGGATGCTG
TTGCCAAGCCGGACTCTTCTGATGCGATGGCAGCAACCATCCGATTGATT
GCTAGCGGTCAAATCTACTTGATCTCTTTCGGCCATACGAAGTACAAACG
TCGTAGCACTACCTGTTTGTACCGCATCTACGTAACATGTGTGTGCGAAG
TTGGGCACGTGGCCTGGGTTGATCCTTGTTGGATCTATCCGTCGTGACAA
CAGGTTGGGCAGATGCTTGTGAAATGCCCACCGAGTTTGGCTTAGCGTGT
ACTCCTGTTTTGGTTTCTGCGACCCACCATGTGCCGGTGGCGCCTTACAA
GAGGCCATTGATTTTGTTTTTTCGAGAGTTGGAGAGTGACACGTGCCCAT
CACGTGGGGCGGTACCTAGTTTTCTGCAGATTTTACGTTGTCTTTAAAGG
TTGTGTTCGAAGGCAGATTTTTTTTCGTTGGTGTACGGGAGGTTCGTGTG
TTTTTGCCTGAAAGTAATGTGCCCGATTGCTTGACTTCCAGCTTCACGGG
CGCGTACAAGAGATGGCTTGCTTTTGTGTGTATTGAGAATACTGCCTGTC
GATCACGCAGGTATCGCCGCGGCAGATGGAGTGTTGGCCCCCATCTTGTT
TTTCTGAAGTTGAAATTGGAGCGACTGTGTAGAGCTTTTTCGTTTCGCAT
TTCTCGCAGCCTGGTTTTGTGATATCAGTCGGGGGGAGGGAGGCGAAAAA
AAGGCGGTTGCGCACGTTGAACGGCCCGAGCGTGGAAGGCCTCTTGGTAG
CCACACGGGCGTAGATAGATATTTGGTAAGCGTTGAGGTCTACAAACAGA
GCAAACGCTTGAGGGTGGTGGTTATTTTGCCGTGTGGGTGGCGGCGGTGG
AAAGGGGGGTGTGGAGGAGGCTGAGGCTTTCATATGTTAATTTGTGAGAA
GGAGATGACAGCAGGTAGACCTGGAGATCGATCGTTGGCCACCCTTTCAT
TGTATATGTTTATATGTTTCCTGTTATTTCTTATTTCTTAGATATCGACG
GCACCTACCGGCAGCTCTCCTACGCCCAGGCTCTGAAGATGGTCGGGTGC
CAGAGCGTGGAGGCGACTGTCCGACAGCGGCGCCTGCTTTTCGCGGGGGC
CGTCGCCAGGCAGCCGGACGGGCGATTCCCGAAGC
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Coding sequence (CDS) from alignment at C-linearis_contig107:246042..255826+

>mRNA_C-linearis_contig107.1034.1 ID=mRNA_C-linearis_contig107.1034.1|Name=mRNA_C-linearis_contig107.1034.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at C-linearis_contig107:246042..255826+ (Chordaria linearis ClinC8C monoicous)
ATGAAATTCCTGAGATGAAATTCCTGAGGAGGGAATCAGAGCGTGGAGAG
TTTCAGCAAGACGGTGGGCGGCCGCCACAGCCATCCACATCCAAGAAGTC
TACGGCCATGAATGCCATGAATGACTCGGTGCACGGTTCACCGGAGGGAA
TCAGAGCGTGGAGAGTTTCAGCAAGACGGTGGGCGGCCGCCACAGCCATC
CACATCCAAGAAGTCTACGGCCATGAATGCCATGAATGACTCGGTGCACG
GTTCACCGGAGCCAACACCGGTGGCCAAGAGCACTGCTCCCCCAGCGGCG
TCAACCCCTGGCAGCACTACGAGCGACGCGTCGAGTATCACAACCCAAAC
GCCAGACAATGTGATTGGCGAGACGCTGGTTGTCCAAGGCCGCGTGGAGT
TCAAGAAATTGCTGAGGATCGACGGACACTTCGAAGGAGCCAACACCGGT
GGCCAAGAGCACTGCTCCCCCAGCGGCGTCAACCCCTGGCAGCACTACGA
GCGACGCGTCGAGTATCACAACCCAAACGCCAGACAATGTGATTGGCGAG
ACGCTGGTTGTCCAAGGCCGCGTGGAGTTCAAGAAATTGCTGAGGATCGA
CGGACACTTCGAAGGAGAGTTGATCGGGAATGGAAGTTTGATCATCGGCC
CGACCGCCGAAGTGATCTCCAACCTTCGGGGACTTCATGAGGAGAGTTGA
TCGGGAATGGAAGTTTGATCATCGGCCCGACCGCCGAAGTGATCTCCAAC
CTTCGGGGACTTCATGAGGTCTACGTCGAAGGCATTTTGATCGGAGACTG
CTCCTGCACCAAGATGCAGATTCGGTTCGCTGGGTGTGTCACGGGCAACC
TTCAGTGTGCTTCTCTAGGGATGGACCCCAGCGTCGTTCTCAAGGTCTAC
GTCGAAGGCATTTTGATCGGAGACTGCTCCTGCACCAAGATGCAGATTCG
GTTCGCTGGGTGTGTCACGGGCAACCTTCAGTGTGCTTCTCTAGGGATGG
ACCCCAGCGTCGTTCTCAAGGGAAGCGCCAACATCAACCCGCGCGACAAG
GTTGAAAAGCCCCGCTCCAGGAATGCGGCATCTCGCCACAAGCAACAATC
TCGATCGCAGGGAAGCGCCAACATCAACCCGCGCGACAAGGTTGAAAAGC
CCCGCTCCAGGAATGCGGCATCTCGCCACAAGCAACAATCTCGATCGCAG
GCCCGGACGACGGAGGACACCGCGTCGAGATCATCGACTTCGACACTCAG
TCCTGAATCGATCGGGAAGCACGCGAAGACACGGAGCAGGGGGAGCGGGG
ATTTGCGTCCTGAGGCAATTCGCCCCGAGGGAAGGTCAGGGGGGCACGGG
CATTCTTTATCGGGAGACTCTGCCACTTCGTCGGTCAACCCCACGGCCGA
CGACATGCCTCTGCCCCACCCTCCGATGGCTAACGGCGCCAACGGTGCTA
TTGCTGGTGCCGGCACTAGTGGAGACATGGTTGCACCTAAGTTGAGCTCG
GGGGATGCCGTCAAGATGCCGGTGCGGGCTGCCGTTCCGCGCCCAGTGCA
CAAATGAGCCCGGACGACGGAGGACACCGCGTCGAGATCATCGACTTCGA
CACTCAGTCCTGAATCGATCGGGAAGCACGCGAAGACACGGAGCAGGGGG
AGCGGGGATTTGCGTCCTGAGGCAATTCGCCCCGAGGGAAGGTCAGGGGG
GCACGGGCATTCTTTATCGGGAGACTCTGCCACTTCGTCGGTCAACCCCA
CGGCCGACGACATGCCTCTGCCCCACCCTCCGATGGCTAACGGCGCCAAC
GGTGCTATTGCTGGTGCCGGCACTAGTGGAGACATGGTTGCACCTAAGTT
GAGCTCGGGGGATGCCGTCAAGATGCCGGTGCGGGCTGCCGTTCCGCGCC
CAGTGCACAAATGA
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