mRNA_C-linearis_contig105.954.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 857 bits (2214), Expect = 1.100e-300 Identity = 432/744 (58.06%), Postives = 523/744 (70.30%), Query Frame = 1 Query: 682 EDDDRACSHNAAGFACIDPEAPCVDDDDITVDMVENCGAAGIGDGWCNDVNNIPECNYDGGDCCECTCIAGEEF-------DDDYRCNEL-TGYACVDPAAPCVDDDGVTVDMLENCDYVLGIGNGYCDDQNNNGLCDYDGGDCCECTCDPGSSDDDYR----------CGQSNDFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYA-MPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 +DDD CS + +GFACIDP+A CVDDDDIT++M +NC + +GDG+C+ NN C YDGGDCCECTC+A ++ DDD+ C+ +G+AC+DPAAPCV+DD +T DM+ENC YV G+G+G+C ++NNN LC YDGGDCCECTC +DDD+ CG FACIDP+A CVDDD++TV +VE+CD + IG+G+C+M NNNE C YDGGDCC+CTC N+ C +++ACIDPAAPCVDDD T ++++NC YP IGNGWCD DNN C YDGGDCCECTC + E DDDWAC +N FAC+DP A CVDDD +T+DM+ENC A I +G+C N PEC YDGGDCC CTC D DDD+ +AC+DPEA CV+DD +TVDM C +P +G+GWCD GNN C YDGGDCCECTCE + D Y C EF+C+DP A C +DD++TIDM ENC YV GIG+G+C NN ECG+DGGDCC CTC+S YDDD+ CS+ F C+D SA CFGE T DDF+ + DDY M YEFV WE+ LPT AVEVG KTEVGV+AT +D RPG S G GCGE GG GC A N+RDGI S +ESRWSC TSLV GPCQ+E+TFAEPQ+IVDIQVAFW NER TL+V+ NGE THTHESY TFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 18 DDDDWRCSRDGSGFACIDPDASCVDDDDITIEMAQNCDTSELGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGG--FACIDPSAACVDDDEVTVGMVESCDTVS-IGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNR-------CGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLE---DDDWACRNN--FACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQN--DVDDDWX---XXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCENER----DEDYR-CMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSA--YDDDYSCSSEYGYFDCQDPSASCFGEGT-TGSDDFS--FHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEV 730
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 726 bits (1875), Expect = 1.590e-247 Identity = 422/902 (46.78%), Postives = 525/902 (58.20%), Query Frame = 1 Query: 409 GYDGGDCCSCTCVPPVNEYSWDDDYACTGDLASFACIDPDAPCVDDDDITIDVFENCDYGSIGNGYCDQGNNKPECSYDGGDCCGCTCVA--EEDDDRACSHNAAGFACIDPEAPCVDDDDITVDMVENCG-AAGIGDGWCNDVNNIPECNYDGGDCCECTCIAGE-----EFDDDYRCNELTGYACVDPAAPCVDDDGVTVDMLENCDYVLGIGNGYCDDQNNNGLCDYDGGDCCECTCDPGSSDDDYRCGQSNDFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECN---YDGGDCCECTCDPG-PDA------DDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYD--DDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYAMPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDV------------------------------------------------------------------YFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 GYDGGDCC CTCV P + DDD+ C+ D + FACIDPDA CVDDDDIT+++ +NCD +G+G+CDQ NN C YDGGDCC CTCV+ ++DDD AC + A CIDP+APCVDDDDIT MVE CG G+GDGWC++ NN C YDGGDCCECTC A ++DDD+ +G+AC+DP APCV+DD +TVD+ E+CD V +G+GYCD NN C G C +C + + +CG+ + FACIDP APCVDDD TVD+++NCD+ GIG+GWCD NNNE CG W+ T + + V CG + W D E + G+ E ++++ W +++TVDM+ENC + I +G+C N PEC + + E P A DDD+ C+ +AC+DPEA CVDDD +TVDM+E C +P +G+GWCD GNN C YDGGDCCECTCE + YD DD Y+ CREF+C+DP+A C DD+IT+DMFENC YV GIG+G+C NN ECG+DGGDCC CTC+S YDDD+LCS+ F C+D +A CFGEE T DD++ TDD M YEFVPWE+ LPT +GAVEVG KTEVGV+AT +D R G S+G GCGE GG GC A N+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ I+DIQVAFWK NERTRTL+V + NGE THTHESY +TFN LG TA +V TVMLE+ L S+EWISLIEV Sbjct: 20 GYDGGDCCECTCVNPWGD---DDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDTWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNA---CIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESCDAV-NMGDGYCDISNNIEAC----GACSWLSC---TDTPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDW--GIGDGWCDEDNNNELCG-------------DRVIEGWESIVNATAER----------------VVRTTVVRCG----VSVKWLDN-----ELKEEIGERREVFKQFLSEAFEESW--------------------ENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLETVETRISLHLPLALRQNIYDDDWSCT---RFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYH-CREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSP--YDDDYLCSSEYGSFDCQDPNASCFGEES-TGSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 837
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 662 bits (1707), Expect = 1.700e-227 Identity = 328/534 (61.42%), Postives = 381/534 (71.35%), Query Frame = 1 Query: 1261 MGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYD--DDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYAMPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 M NNN C YDGGDCC+CTC N+ C + +ACIDP APCVDDD T ++++NC YP IG+GWCD+DNN C YDGGDCCECTC E S DDDW C + FAC+DP A CVDDD +T+DM+ENC + I +G+C N PEC YDGGDCC CTC+ DDD+ C +AC+DPEA CVDDD +TVDM E C +P IGNGWCD NN C YDGGDCCECTCE + YD DD Y+ C EFAC+DP A C DDD+IT+DM ENC YV GIG+G+C NN ECG+DGGDCC CTCES YDDD+ CS+ F CKD +A CFGEEP T DDF+ TDD M YEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG S+G GCGE GG GC A N+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ I+DIQVAFWK NERTRTL+V+ NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 1 MDNNNAACAYDGGDCCECTCEDTPNNK-------CGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTC---EGSEDDDWHCRN---FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCES--PYDDDWGCM---WFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYH-CMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESP--YDDDYSCSSEYGSFDCKDPNASCFGEEP-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 509
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 610 bits (1572), Expect = 1.800e-205 Identity = 332/619 (53.63%), Postives = 400/619 (64.62%), Query Frame = 1 Query: 1033 GYCDDQNNNGLCDYDGGDCCECTCDPGSSDDDYRCGQSNDFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITA---EIV-ENCGYPN-SIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCD-PGPDADDDYR-CSPGAGYACVDPEAPCVDDDSVTVDMLEQCHW-PSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNA-CREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEP--PTSDDDFASTYTDDYAMPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 G CD NNN C+YDGGDCC CTC +D Y CG S F C+DP+A CVDDDDI + V+NC P IG+G CD NN E C YDGGDCC CTC P+ D + DD +C + A +ACIDP APCV+DDD TA E+V E CG + +G CDQ NN EC YDGGDCC CTC+ DD + C GFACIDP+A C DDDD+TVD VENC +I +G CD NN+ EC+YDGGDCC CTC P D+ DD CS +AC+DP+APCV+DD +TVDM++ C P G+GWCD NN EC YD GDCC CTC D +Y F CVDP AEC DDD + + ++C + +GYC NN EC +DGGDCC CTCE + D C+ SGF C+D +APCF EEP P +DD D +M Y+F+ ++D L AVEVG KT+V V+AT YD RPG S+G GCGE GG+GC AN+RDGI + ESRWSC + +V GGGPCQ+EY F EPQDI DI+VAFW +ER RTL+VYF+G THESYAGSTFN+LG +A + TVMLE+ L NEWISLIEV Sbjct: 40 GECDTHNNNAECEYDGGDCCSCTC----QNDTYDCGVSG-FDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPD-DGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL------DDFYECGIR-GFACIDPSAECADDDDVTVDTVENCG-VRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCV-------DGTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCT---SGFDCQDPTAPCFDEEPTLPEKEDD-------DGSMSYDFL--DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 591 bits (1523), Expect = 2.480e-198 Identity = 329/635 (51.81%), Postives = 398/635 (62.68%), Query Frame = 1 Query: 1021 GIGNGYCDDQNNNGLCDYDGGDCCECTC-DPGSSDDDYRCGQSN-DFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDW------------------ACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGN--NNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYA-MPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 G G+GYC QNNN C YDGGDCCECTC +P DD++ C + FACIDP APCVDDDDIT++I +NC + +GNG+CD NNNE CGYD GDCC+CTCV+P +D+ W + +D + +ACIDPAAPCVDDDD+T ++VENCGY +G+GWCD NN C YDGGDCCECTCVAP + DDW AC GFACIDP AACV+DDDITV M D +NK C DM+E C +P G+G+G+C+ NN C YDGGDCC CTC Q+ +DDD AC FAC+DP+A C +DD+IT+DMF NC+Y + IG+G+ G+DGGDCC CTC++ +DDD+ CS+ + CKD +A CFGE T DDF T+ DDY YEFV WE+ LPT AVEVG KTEVGV+AT +D RP S+ GCG+ GG GC A N+RDGIVS +ESRWSC T LV G CQ+E++FAEPQ++VDIQVAFWK NERTRTL V+ NGE THTHESYA STFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 28 GFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNC-VTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDW---YCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPAN--DDWDXXXXXXXXXXXXXXXXGACG--GGFACIDPNAACVNDDDITVGM---------------DTPSNK--------------------------CGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTC--QNDFDDDW---ACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGT-TGSDDF--TFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEV 605
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 1.030e-175 Identity = 272/481 (56.55%), Postives = 333/481 (69.23%), Query Frame = 1 Query: 1426 ITAEIVENCGYPNSI-GNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHN-AGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCD--PGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYAMPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 + A + + G +++ G+G+C NN EC YDGGDCCECTC P+ D W CS N +GFAC+DP A C +D +TV+ + C D ++ +GWCD NN C YDGGDCCECTC+ D D+D + G G+AC+DP APCV+DD +TVD+ E C G+G+G+CD+ NN C YDGGDCCECTCE + S FAC+DP A C DDD +T+DM +NCDY+ +G+G+C NNN C +DGGDCC CTCES ++DD+ CS+ F+CKD +A CFGEE T DDF+ TDD M YEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG GCGE GG GC AAN+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ IVDIQVAFWK NERTRTL+VY NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 21 VAANSLSSSGCWDALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGG-DHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQEC-DFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCD-AVGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGGRSG------FACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESA--WNDDYTCSSEHGTFNCKDPNASCFGEET-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 482
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 481 bits (1238), Expect = 2.090e-156 Identity = 256/480 (53.33%), Postives = 304/480 (63.33%), Query Frame = 1 Query: 1570 DDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYD--DDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYAMPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDV-------------------------------------------------YFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 DDDW C + FAC+DP A CVDDD +TVDM+ENC + I +G+C N PEC DDD+ C+ +AC+DPEA CVDDD +TVDM E C + +G+GWCD GNN C YDGGDCCECTCE + YD DD Y+ CREF+C+DP+A C DD+IT+DMFENC YV GIG+G+C NN ECG+DGGDCC CTC+S YDDD+LCS+ F C+D +A CFGEE T DD++ TDD M YEFVPWE+ LPT +GAVEVG KTEVGV+AT +D R G S+G GCGE GG GC A N+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ I+DIQVAFWK NERTRTL+V + NGE THTHESYA +TFN LG TA +V TVMLE+ L S+EWISLIEV Sbjct: 5 DDDWHCRN---FACVDPNAPCVDDDSVTVDMIENCSWSTGIGDGYCSENLNTPECEVGV-------------YDDDWSCT---RFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYH-CREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSP--YDDDYLCSSEYGSFDCQDPNASCFGEES-TGSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 1.190e-128 Identity = 189/307 (61.56%), Postives = 221/307 (71.99%), Query Frame = 1 Query: 640 YDGGDCCGCTCVAEEDDDRACSHNAAGFACIDPEAPCVDDDDITVDMVENCGAAGIGDGWCNDVNNIPECNYDGGDCCECTCIAGEEFDDDYRCNELTGYACVDPAAPCVDDDGVTVDMLENCDYVLGIGNGYCDDQNNNGLCDYDGGDCCECTCDP----GSSDDDYRCGQSNDFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTC 1548 +DGGDCC CTCV+ DDD +CS +GFAC+DP APCVDDDDIT++ NC GDGWC+ NN C YDGGDCCECTC+ +DDDY C AC+DP+APCVDDD VTVDM+ENC YV +GNG+CD++NNN C YDGGDCCECTC P +DD ++ G N FACIDP APCV+DDDIT+DIVENCD A +GNG+CDM NNNE C YDGGDCC+CTC N C + +ACIDP APCVD+D T ++VE+C YP S GNGWCD+DNN EC YDGGDCCECTC Sbjct: 6 FDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNCFPREFGDGWCDQENNNEICGYDGGDCCECTCV--NAWDDDYSC--AANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENCDSVA-VGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQE-------CGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTC 300
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 371 bits (952), Expect = 1.100e-117 Identity = 189/309 (61.17%), Postives = 222/309 (71.84%), Query Frame = 1 Query: 1930 LGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNACREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFSCKDESAPCFGEEPPTSDDDFASTYTDDYAMPYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMHGCGEDGGDGCEAANSRDGIVSVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2856 + N YDGGDCCECTCE DD Y C +F+C+DP+A C +DD+IT+DMF+NC YV GIGDG+C S NN CG+DGGDCC CTCES +DDD+ C + F CKD SA CFGEE + D ++ + D YEFVPWEQ PLPT + AVEVG KTEV V+AT +D R G S+G GCGE GG+GC A N+RDGI + +ESRWSC L+ GPCQ+E++FAEPQ+IVDIQVAFWK NER RTL+VY NGE THTHESYA STFNTLG TANE TVMLE+ L SNEWISLIEV Sbjct: 1 MARNVVISGYDGGDCCECTCEG-----DDDDYK-CMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESV--WDDDYTCGEDAF-FDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 370 bits (949), Expect = 5.680e-111 Identity = 209/412 (50.73%), Postives = 257/412 (62.38%), Query Frame = 1 Query: 640 YDGGDCCGCTCVAEEDDDRACSHNAAGFACIDPEAPCVDDDDITVDMVENCGAAG-----IGDGWCNDVNNIPECNYDGGDCCECTCIAGEEFDDDYRCNELTGYACVDPAAPCVDDDGVTVDMLENCD----YVLGIGNGYCDDQNNNGLCDYDGGDCCECTCDPGSSDDDYRCGQSNDFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDAD---DDYRCSPGAGYACVDP 1839 YDGGDCC CTCV D + + GFACIDP A CVDDD+IT D+ E+C G IGDG+C+D NN C+YDGGDCCECTC+ D Y C + +AC+DP+A CVDDD +T D+ E+C YV G+GNGYC++ NN CDYD GDCC+CTC G DD DFAC+DP APCVDDD +T + E+C G+G+C+ NNNE CGYDGGDCC+CTCV W +F CT+ +ACIDP APCVDDDD+TA+ +ENC +G+G+CD NN C+YDGGDCCECTC + D S + F CIDP A+C D+ ITVDM E C D + + C NN C+YD GDCCE TC G D+ D+ CS +ACVDP Sbjct: 19 YDGGDCCECTCV-----DASFTCGYGGFACIDPSAACVDDDNITEDIAESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCV-----DAFYPCGYVA-FACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTC--GIESDDLSDFSCVDFACVDPNAPCVDDD-VTEGMFEDC---FNFGDGFCNDYNNNEQCGYDGGDCCECTCVV-----DWSAEFGCTE---FACIDPTAPCVDDDDVTADALENCMIE-YLGDGYCDTYNNNEICDYDGGDCCECTCGSDST---DVLVGSDCSDFVCIDPTASCFDES-ITVDMYEYC-DVELLGDSICQPSNNFEVCDYDFGDCCEATC--GVDSSGTLDELSCS---SFACVDP 394 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.954.1 >prot_C-linearis_contig105.954.1 ID=prot_C-linearis_contig105.954.1|Name=mRNA_C-linearis_contig105.954.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=944bp MVIMKTSKRWLGLLGAAVIVSAVGVSAYNDYYSSSTGCYELWQGDGYCDSback to top mRNA from alignment at C-linearis_contig105:394248..430743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.954.1 ID=mRNA_C-linearis_contig105.954.1|Name=mRNA_C-linearis_contig105.954.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=36496bp|location=Sequence derived from alignment at C-linearis_contig105:394248..430743+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:394248..430743+ >mRNA_C-linearis_contig105.954.1 ID=mRNA_C-linearis_contig105.954.1|Name=mRNA_C-linearis_contig105.954.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5664bp|location=Sequence derived from alignment at C-linearis_contig105:394248..430743+ (Chordaria linearis ClinC8C monoicous)back to top |