mRNA_C-linearis_contig105.952.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 730 bits (1884), Expect = 3.420e-254 Identity = 395/739 (53.45%), Postives = 466/739 (63.06%), Query Frame = 1 Query: 82 DIYTCGEHG-GFQCIDPDAPCVDDDDITVEQLENCGYGNIGNGYCDTENNRALCNYDGGDCCACTCSA----ENNAWDDD---YYGCRGS-FQCIDPTSGCVDDDDITIDMVENCGYVGGIGNGYCDEENNNAGCNYDGGDCCECTCVAPERTDDWIDAS----YVGCGAGFSCIDPGAPCVNDDDITVGLLETCDTVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQECGRWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIP-------ECSECPCARLR-----VRGN-AEIQPVAARPVVWSPLCKTNNIDAVARLRLKICSWVSFFKVEKLSVGACVRQRPTA-CRRGGGGLFSTRYRQNMTAIDTLVYFSNCLAPEA----DTSLLTSPLPLCASSV-VCLALCQD--------YDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDD-DFSDDYA-MSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEVCFYV 2172 D + C G GF CIDPDA CVDDDDIT+E +NC +G+GYCD +NN +C YDGGDCC CTC A + WDDD GS F CIDP + CV+DDDIT DMVENCGYV G+G+G+C EENNN C YDGGDCCECTCVAP DDW Y CG GF+CIDP A CV+DD++TVG++E+CDTV + + YC+ NN C YDGGDCC CTC D PN CGRW FACIDP A CVDDD T DM+D C++ GIGNG+CD+D N +C EC C L R N A + P A P V + D+V L+ C W + G C T C GG + QN D C+ PEA D + C V V C YDGGDCCECTC+ +E +DY C EF+CIDP APCVN+D +TIDM+E CGYV GIGNG+C+ +NN E C YDGGDCCSCTC+ +DDDY+C+++ F C+D SA CFGE T DD F DDY MSYEF+ WE+ LPTV A EVGTKTEVGV+A AHD+RPG+S DVGCG GG GC N+RDGI S+IESRWSCA LV DEGPCQIE+TFAEPQ+IVDI VAFW NER TL+VH++G THTHESY TFNTL V+A+ STVMLESV LL DEW+SL+EV +V Sbjct: 20 DDWRCSRDGSGFACIDPDASCVDDDDITIEMAQNCDTSELGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWACRNNFACVDPNA--PCV--------DDDSVTIDMLENCPWAV-----GIGDGYCSEDLNTPECAYDGGDCCACTC-QNDVDDDWXXXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCE-NERDEDYR------CMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGTTGSDDFSFHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFV 734
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 701 bits (1810), Expect = 4.410e-241 Identity = 398/828 (48.07%), Postives = 471/828 (56.88%), Query Frame = 1 Query: 37 GYDSGDCCSCTCVTT----DIYTCGEHG-GFQCIDPDAPCVDDDDITVEQLENCGYGNIGNGYCDTENNRALCNYDGGDCCACTCSAENNAWDDDY-YGCRGSFQCIDPTSGCVDDDDITIDMVENCGYVGGIGNGYCDEENNNAGCNYDGGDCCECTCVAPERTDDWI--DASYVGCGAGFSCIDPGAPCVNDDDITVGLLETCDTVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQECGRWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIPECSECPCARLRVRGNAEIQPVAARPVV-------WSPLCKTNNI-------------------DAVARLRLKICSWVSF----FKVEKLSVGACVRQRPTACRRGGGGL---FSTRYRQNMTAIDTLVYFSNCLAPEA----DTSLLTSPLPLCASSV-VCLALCQD--------YDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDDDFSDDYAMSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTL------------------------------------------------------------------QVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEV 2160 GYD GDCC CTCV D + C + G GF CIDPDA CVDDDDITVE +NC +G+G+CD +NN +C YDGGDCC CTC + WDDD + CR CIDP + CVDDDDIT MVE CG+V G+G+G+CDE+NNN C YDGGDCCECTC AP DDW D Y CG+GF+CIDP APCVNDDDITV + E+CD V M + YCD NN C G C +C D PN +CGRW GFACIDPEA CVDDD T DM+D CDW GIG+G+CD D N C + NA + V VV W I + V ++ CSW + + E L+ C + + RQN+ D C+ PEA D + + C + V C YDGGDCCECTC+ + D + Y C EF+CIDP A CV++D IT+DM E CGYV GIGNG+C+ +NN E C YDGGDCCSCTC+ +DDDY C+++ F C+D +A CFGEE+T DD +DD MSYEF+PWE+ LPTV+GA EVGTKTEVGV+A AHDVR G SS DVGCG GG GC N+RDGI SEIESRWSCA KLV DEGPCQIE+TFAEPQ I+DI VAFWKGNERTRTL QVH++G THTHESY +TFN L V+A+ VSTVMLESV LL DEW+SLIEV Sbjct: 20 GYDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDTWGLGDGWCDQDNNNEICGYDGGDCCECTCVSP---WDDDDDWACRNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESCDAVNMGDGYCDISNNIEAC----GACSWLSCTDTPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDW--GIGDGWCDEDNNNELCGDRVIEGWESIVNATAERVVRTTVVRCGVSVKWLDNELKEEIGERREVFKQFLSEAFEESWENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLETVETRISLHLPLALRQNIYDDDWSCTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYH-CREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 837
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 612 bits (1577), Expect = 4.340e-211 Identity = 326/653 (49.92%), Postives = 387/653 (59.26%), Query Frame = 1 Query: 220 ENNRALCNYDGGDCCACTCSAENNAWDDDYYGCRGSFQCIDPTSGCVDDDDITIDMVENCGYVGGIGNGYCDEENNNAGCNYDGGDCCECTCVAPERTDDWIDASYVGCGAGFSCIDPGAPCVNDDDITVGLLETCD-TVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQECG-RWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIPECSECPCARLRVRGNAEIQPVAARPVVWSPLCKTNNIDAVARLRLKICSWVSFFKVEKLSVGACVRQRPTACRRGGGGLFSTRYRQNMTAIDTLVYFSNCLAPEADTSLLTSPLPLCASSVVCLALCQDYDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDDDFSDDYAMSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEVCFYV 2172 +NN A C YDGGDCC CTC N + G F CIDP + CVDDD T+DM++NC Y GGIG+G+CDE+NNN C YDGGDCCECTC E DDW + F+C+DP APCV+DD +T+ ++E C + + + YC E N PEC YDGGDCCSCTC + + G W FACIDPEA CVDDDDIT DM + C++ V IGNG+CD + NNI+A YDGGDCCECTC+ + D + Y C EFACIDP APCV++D IT+DM+E CGYV GIGNG+C+ +NN E C YDGGDCCSCTCE +DDDY+C+++ F CKD +A CFGEE T DD +DD MSYEF+PWE+ LPTV+GA EVGTKTEVGV++ AHDVRPG SS D GCG GG GC N+RDGI SEIESRWSCA KLV DEGPCQIE+TFAEPQ I+DI VAFWKGNERTRTL+VH++G THTHESYA +TFNTL V+A+ VSTVMLESV LL DEW+SLIEV +V Sbjct: 2 DNNNAACAYDGGDCCECTCEDTPN----NKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSED-DDWHCRN-------FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMW--FACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCD--------------------------------------EANNIEACG----------------------------------------------------------------------------------------YDGGDCCECTCEYESPYDWDDDWDYH-CMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEPTGSDDFSTDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 513
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 8.840e-194 Identity = 335/750 (44.67%), Postives = 399/750 (53.20%), Query Frame = 1 Query: 1 GDCDSANNSAECGYDSGDCCSCTCVTT----DIYTCGEHG-GFQCIDPDAPCVDDDDITVEQLENCGYGNIGNGYCDTENNRALCNYDGGDCCACTCSAENNAWDDDYYGCRGS---FQCIDPTSGCVDDDDITIDMVENCGYVGGIGNGYCDEENNNAGCNYDGGDCCECTCVAPERTDDWIDASYV------------GCGAGFSCIDPGAPCVNDDDITVGLLETCDTVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQECGRWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIPECSECPCARLRVRGNAEIQPVAARPVVWSPLCKTNNIDAVARLRLKICSWVSFFKVEKLSVGACVRQRPTACRRGGGGLFSTRYRQNMTAIDTLVYFSNCLAPEADTSLLTSPLPLCASSVVCLALCQDYDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCL--YDGGDCCSCTCE--YEFDDDYACNADGAGFHCKDESAPCFGEENTRDDD-DFSDDYA-MSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEVCFYV 2172 G C NN+AECGYD GDCC CTC D + C + G GF CIDPDAPCVDDDDIT+E +NC ++GNGYCD +NN +C YD GDCC CTC + WDDD + C F CIDP + CVDDDD+TIDMVENCGYV G+G+G+CD+ NNN C YDGGDCCECTCVAP DDW CG GF+CIDP A CVNDDDITVG+ D P+ +CG DM++ C++ G+G+GYC+ + NN + LCA YDGGDCC CTCQ D DD++ C FACIDPEA CVN+D IT+DM C Y + IGNG+ + + YDGGDCCSCTC+ +++DDDY+C+++ CKD +A CFGE T DD F DDY SYEF+ WE+ LPTV A EVGTKTEVGV+A AHDVRP +SS DVGCG GG GC N+RDGI S+IESRWSCA LV DEG CQIE++FAEPQ++VDI VAFWKGNERTRTL VH++G THTHESYA STFNTL V+A+ STVMLESV LL DEW+SL+EV +V Sbjct: 32 GYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSP---WDDDDWYCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGM------------------------------------DTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCN--------------------------------------QQNNNE-----------------------------------------------------------------------------LCA-----------YDGGDCCSCTCQND-FDDDWA------CTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTTGSDDFTFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEVLIFV 609
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 546 bits (1407), Expect = 9.160e-184 Identity = 323/737 (43.83%), Postives = 400/737 (54.27%), Query Frame = 1 Query: 1 GDCDSANNSAECGYDSGDCCSCTCVTTDIYTCGEHGGFQCIDPDAPCVDDDDITVEQLENCGYG-NIGNGYCDTENNRALCNYDGGDCCACTCSAENNAWDDDYYGCRGS--FQCIDPTSGCVDDDDITIDMVE----NCG-YVGGIGNGYCDEENNNAGCNYDGGDCCECTCVAPERTDDWIDASYVGCGA-GFSCIDPGAPCVNDDDITVGLLETCDTVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQE------CGRWDGFACIDPEALCVDDDDITADMLDACDW-VVGIGNGYCDLDMNIPECSECPCARLRVRGNAEIQPVAARPVVWSPLCKTNNIDAVARLRLKICSWVSFFKVEKLSVGACVRQRPTACRRGGGGLFSTRYRQNMTAIDTLVYFSNCLAPEADTSLLTSPLPLCASSVVCLALCQDYDGGDCCECTCQVDEHGDDYSNGRYS-GCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDDDFSDDYAMSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEV 2160 G+CD+ NN+AEC YD GDCCSCTC D Y CG G F C+DP A CVDDDDI E ++NCG IG+G CD +NN C+YDGGDCC+CTC ++ DD C S F CIDP + CV+DDD T + E CG + + +G CD+ NNN C YDGGDCC CTC+ DD+ + CG GF+CIDP A C +DDD+TV +E C + + CD NN+ EC+YDGGDCCSCTC + C FACIDP+A CV+DDDIT DM+D C + G+G+CD D N EC YD GDCC CTC VD G Y G F C+DP A CV++D + + + CG + NGYC+ DNN E C YDGGDCC CTCE +D + ++ +GF C+D +APCF EE T + + DD +MSY+F+ ++D L A EVGTKT+V V+A A+D RPG+SS DVGCG GG+GC+PAN+RDGI++E ESRWSCA K+V GPCQIEY F EPQDI DI VAFW G+ER RTL+V+ DG THESYAGSTFN+L VSA+G+ TVMLESVDLL +EW+SLIEV Sbjct: 40 GECDTHNNNAECEYDGGDCCSCTCQN-DTYDCGVSG-FDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL-----DDFYE-----CGIRGFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECG------------------------------------------------------------------------------------------------------------------------------YDSGDCCSCTC-VD--------GTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGS-DSCTSGFDCQDPTAPCFDEEPTLPEKE-DDDGSMSYDFL--DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 513 bits (1322), Expect = 5.550e-173 Identity = 279/594 (46.97%), Postives = 341/594 (57.41%), Query Frame = 1 Query: 418 GNGYCDEENNNAGCNYDGGDCCECTCVAPERTDD-WIDASYVGCGAGFSCIDPGAPCVNDDDITVGLLETCDTVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQE--------CGRWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIPECSECPCARLRVRGNAEIQPVAARPVVWSPLCKTNNIDAVARLRLKICSWVSFFKVEKLSVGACVRQRPTACRRGGGGLFSTRYRQNMTAIDTLVYFSNCLAPEADTSLLTSPLPLCASSVVCLALCQDYDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDDDFSDDYAMSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEVCFYV 2172 G+GYC NNNA C YDGGDCCECTC P+ D WI + G+GF+C+DP APC +D +TV + CD + + +CD+ NN C YDGGDCC CTC + + CG GFACIDP A CV+DDDIT D+ ++CD VG+G+GYCD+D N C+ YDGGDCCECTC+ N + G + FACIDP APCV++DS+T+DM++ C Y+ +GNG+C+++NNNELC YDGGDCC CTCE ++DDY C+++ F+CKD +A CFGEE T DD +DD MSYEF+PWE+ LPTV+GA EVGTKTEVGV++ AHDVRPG D GCG GG GC AN+RDGI SEIESRWSCA KLV DEGPCQIE+TFAEPQ IVDI VAFWKGNERTRTL+V+++G THTHESYA +TFNTL V+A+ VSTVMLESV LL DEW+SLIEV +V Sbjct: 37 GDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKN---GSGFACVDPDAPCYAEDGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGE--GFACIDPSAPCVNDDDITVDVDESCD-AVGMGDGYCDMDNNNAACA------------------------------------------------------------------------------------------------------------------------------YDGGDCCECTCEP--------NNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTGSDDFSTDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 486
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 8.840e-140 Identity = 254/588 (43.20%), Postives = 303/588 (51.53%), Query Frame = 1 Query: 556 FSCIDPGAPCVNDDDITVGLLETCD-TVRMSNAYCDEQNNKPECN---YDGGDCCSCTCVDKPNQECGRWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIPECSECPCARLRVRGNAEIQPVAARPVVWSPLCKTNNIDAVARLRLKICSWVSFFKVEKLSVGACVRQRPTACRRGGGGLFSTRYRQNMTAIDTLVYFSNCLAPEADTSLLTSPLPLCASSVVCLALCQDYDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDDDFSDDYAMSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTL-------------------------------------------------QVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEV 2160 F+C+DP APCV+DD +TV ++E C + + + YC E N PEC YD D SCT FACIDPEA CVDDDDIT DM + CD+ + +G+G+CD + NN +A YDGGDCCECTC+ + D + Y C EF+CIDP A CV++D IT+DM E CGYV GIGNG+C+ +NN E C YDGGDCCSCTC+ +DDDY C+++ F C+D +A CFGEE+T DD +DD MSYEF+PWE+ LPTV+GA EVGTKTEVGV+A AHDVR G SS DVGCG GG GC N+RDGI SEIESRWSCA KLV DEGPCQIE+TFAEPQ I+DI VAFWKGNERTRTL QVH++G THTHESYA +TFN L V+A+ VSTVMLESV LL DEW+SLIEV Sbjct: 13 FACVDPNAPCVDDDSVTVDMIENCSWSTGIGDGYCSENLNTPECEVGVYD--DDWSCT-------------RFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCD--------------------------------------EGNNNEACG----------------------------------------------------------------------------------------YDGGDCCECTCEYESPYDWDDDWDYH-CREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 2.910e-132 Identity = 188/308 (61.04%), Postives = 219/308 (71.10%), Query Frame = 1 Query: 37 GYDSGDCCSCTCVTT--DIYTCGE-HGGFQCIDPDAPCVDDDDITVEQLENCGYGNIGNGYCDTENNRALCNYDGGDCCACTCSAENNAWDDDYYGCRGSFQCIDPTSGCVDDDDITIDMVENCGYVGGIGNGYCDEENNNAGCNYDGGDCCECTCVAPERTDDWIDASYV-GCGAGFSCIDPGAPCVNDDDITVGLLETCDTVRMSNAYCDEQNNKPECNYDGGDCCSCTCVDKPNQECGRWDGFACIDPEALCVDDDDITADMLDACDWVVGIGNGYCDLDMNIPECS-------ECPCARLRVRG 927 G+D GDCC CTCV+ D Y+C GF C+DP APCVDDDDIT+EQ NC G+G+CD ENN +C YDGGDCC CTC NAWDDDY C + CIDP++ CVDDDD+T+DMVENCGYVG +GNG+CDEENNN GC YDGGDCCECTC P TDD D + GCG GF+CIDP APCVNDDDIT+ ++E CD+V + N +CD NN C YDGGDCC CTC D+PNQECGRW GFACIDPEA CVD+D T DM+++C + GNG+CD D NI EC+ EC C VRG Sbjct: 5 GFDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNCFPREFGDGWCDQENNNEICGYDGGDCCECTCV---NAWDDDY-SCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQ-PLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTC---EVRG 304
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 6.040e-129 Identity = 198/304 (65.13%), Postives = 232/304 (76.32%), Query Frame = 1 Query: 1273 YDGGDCCECTCQVDEHGDDYSNGRYSGCNEFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEE----NTRDDDDFSDDYAMSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEVCFYV 2172 YDGGDCCECTC+ D+ DDY C +F+CIDP APCVN+D IT+DM + CGYV GIG+G+C+ +NN E C YDGGDCCSCTCE +DDDY C D A F CKD SA CFGEE N D S D YEF+PWEQ PLPTV+ A EVGTKTEV V+A AHDVR G SS +VGCG GG+GCA N+RDGI++EIESRWSCA KL+ DEGPCQIE++FAEPQ+IVDI VAFWKGNER RTL+V+++G THTHESYA STFNTL V+A+ +TVMLESV LL +EW+SLIEV +V Sbjct: 10 YDGGDCCECTCEGDD--DDYK------CMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGED-AFFDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFV 304
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 358 bits (920), Expect = 8.700e-116 Identity = 179/273 (65.57%), Postives = 211/273 (77.29%), Query Frame = 1 Query: 1360 EFACIDPEAPCVNEDSITIDMLEGCGYVLGIGNGYCNDDNNNELCLYDGGDCCSCTCEYEFDDDYACNADGAGFHCKDESAPCFGEENTRDDD-DFSDDYA-MSYEFIPWEQDGPLPTVEGAFEVGTKTEVGVTAAAHDVRPGASSVDVGCGAEGGDGCAPANSRDGIASEIESRWSCAPKLVLDEGPCQIEYTFAEPQDIVDILVAFWKGNERTRTLQVHLDGVPTHTHESYAGSTFNTLSVSASGVSTVMLESVDLLPDEWLSLIEVCFYV 2172 EFACIDP APCV++D +T+DM+E CGYV GIGNG+C+ +NN E C YDGGDCCSCTC+ +DDDY+C+++ F C+D +A CFGE T DD F DDY MSYEF+ WE+ LPTV A EVGTKTEVGV+A AHDVRPG+S DVGCG GG GC N+RDGI S+IESRWSCA LV DEGPCQIE+TFAEPQ+IVDI VAFW NER TL+VH++G THTHESY TFNTL V+A+ STVMLESV LL DEW+SL+EV +V Sbjct: 2 EFACIDPSAPCVDDDDVTVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPTASCFGEGTTGSDDFSFHDDYQPMSYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFV 273 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.952.1 >prot_C-linearis_contig105.952.1 ID=prot_C-linearis_contig105.952.1|Name=mRNA_C-linearis_contig105.952.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=727bp GDCDSANNSAECGYDSGDCCSCTCVTTDIYTCGEHGGFQCIDPDAPCVDDback to top mRNA from alignment at C-linearis_contig105:297197..301529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.952.1 ID=mRNA_C-linearis_contig105.952.1|Name=mRNA_C-linearis_contig105.952.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4333bp|location=Sequence derived from alignment at C-linearis_contig105:297197..301529+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:297197..301529+ >mRNA_C-linearis_contig105.952.1 ID=mRNA_C-linearis_contig105.952.1|Name=mRNA_C-linearis_contig105.952.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4362bp|location=Sequence derived from alignment at C-linearis_contig105:297197..301529+ (Chordaria linearis ClinC8C monoicous)back to top |