mRNA_C-linearis_contig105.950.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE) HSP 1 Score: 1430 bits (3702), Expect = 0.000e+0 Identity = 872/1551 (56.22%), Postives = 1021/1551 (65.83%), Query Frame = 2 Query: 71 MAWWKQPTSKPSGSVVDMEEEEAVIDLTSETEESIRPPAASATPMDGIEVISP-WALKQIAASPAKKPEKDEKKEVKSEGIKRAAEASKKAEQSGEVLVTSKPAEGLDTE-AARPAKRSKGAADDDLAVVGTTGTKKLPHNRFACTEHTFGGHNSSSSTYKERCSLCFCYVCDRLASDCVEWSDHCHARDTGPMKHSWKALRERAKVLLHSGKRPPVSGYYGP--PSATSPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNILPNACNCEEFCKPVHQVFFSDRPYEPSKAKAALVYLNGLTAQQVQHVEDISIRSTVETMAQRKYDRRY---FSTKMANSAKATLMTRLKTELEPTVRVAVVGGGKRNMTIAAKDPDRS---VRSLFVAKWTPGSLNMVSPAVRLGGVSEIPFRLTPTANGLPSASDKKAYFERFVSTKPMAPTLWYSMHRVINDYSDRFDKGSVIIAKEEDKFLLSRLKNCYEQDLVDVEVTAKYDHNTNSGSYKLEIILLGKLLRRGTSLTPRTSTDFVPIVERVVLKRVYKAPLPSAAASQKKQARLATLSPNPSSAMVNGGVFEHPVVPGREFTPSTKGYGGCSSLDVSLAGLIDSVRQEESNLNVKSGRIIHPAKMLVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPH--PHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSV-GASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQADQSRNGGFPPLRRIRWWRVVLDESHTIY---QKSADVMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKRNDLGDRGANSETQAETVAFLRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSDSGSGASSTASLDAFCPVCSEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------STPG--VVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEPVRWVHGLRCMRRIRVVSGRSSLGVYHMPLHCPTLFGPAPLWRFVLSLSLFLPLPLDVGVRAPCALPCHVFRFGPAHSHPVWLASRFPIPYTPLRGFFQLPTPLALFPQHCFVFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVSVHGCDHDQLLNLALEKQAVGRVYRLGQERPVTVTKLVLEDSIETRILALQKKQATQGAASAATTSGLNSQGVAGNIARDNAKNLRIEEYNALFGV-TETPETVAQSSTSFSARTEAKLAERK 4603
MAWW + S + E IDLTS+TE S P A DG+ + S W LK +AA K+EVK+EG+KRAAEAS KA+QS EV VT KP E ++ E A+RPAKRSK +DD+ VVGTTGT KLPHNRFACTEH F G SS +KE+CSLCFCYVCD AS+C W DHCHA D GPMK SWK LR+RAK L +GK PP+ P+ S G+ XXXXXXXXXXXX S + N CNCEE CKPVH VF + PS+AK +VYL GLT QQVQHVEDISI+ST++ Q+++ RRY + +A S + ++ RL + L+P V+ GKR++T+A D + S R F WTPG+ +RLG VS IPF+L T PS +K YF+RFVS PM +LWY RV+ Y DR+D G+V IAKEEDK L ++ CYE DLVDVE A +D NSGS+ +EIILL KL+ RGTSL R S D P+VER +L VYK P ++ K L++L+ ++ + G V+ GREFTPSTK GG +S+DVSL+GLI+SVR EE+N ++ G+I HPAKML+ELENLQHR+L KQPDCL+V+LYEHQKQDAQWMMDQEML+GGSMQHLWAELP H A+GQR +EFRRCWFSPILNQFT +DP +S++KGGILCDEMGLGKTAATL LHL+HP KTPAPGVPLDEKEWG I G QA LTD +SV G +E P KWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG+R+KDP FLAK+D+VVTTYGVVQ D SRN GFPPLRRIRWWRVVLDESHTI + +V +V+NRRWCMTGTPYISRFSD NGQL F+GAGG+F+ +DLGD+G N ETQ ETVAFLRRVL RHSQGM+L GKSILGLP++THKVEVL +PTKER+AY +FEK LQ +Y+ VRHRLR GSHTM VLTLLS FRQACSGGQL+VGD+A+ + AS+DAFCP+C++++ESPV T CGH FCQACISS+LTK ++D+GPCP+CKKTVRL DL G XXXXXXXXXXXXXXXXXXXXXXXXXX S+PG VVMETKLKALV+ LA IHAKDPTSKSLVFSQFNSSL+WLKRTLPK+GFQFRTLTGSMSR QRT AL+AFA+DPPTTVFLLSVRSGAVGINLTQANNVFLLEP LLNLALEKQAVGRVYRLGQ RPVTVTKLVL+DSIETRILALQKKQAT+G+ASAA +G N G+AGNIARDNAKNL+I+EYNALFGV + +A+ + + + K A+RK
Sbjct: 1 MAWWGALANGASTGAALEDNSEDPIDLTSDTEISPLPGA------DGVGIESAAWGLKLMAA----------KQEVKNEGVKRAAEASAKAQQSDEVQVTDKPPEMINEEVASRPAKRSKEGDEDDMEVVGTTGTAKLPHNRFACTEHKFDGPQGSSG-HKEKCSLCFCYVCDLPASECPAWGDHCHATDAGPMKSSWKLLRQRAKAYLRAGKAPPLIASVSSMAPTPYSAGNVGGXXXXXXXXXXXXGNVNVFV--------------------SPTVSNDCNCEELCKPVHAVFLEMKGNSPSQAKVPVVYLTGLTPQQVQHVEDISIQSTLDREVQKRFQRRYPGATGSALAPSGRHNILVRLASGLKPEFLTVVLPNGKRDVTVACNDREASYAAARLPFKELWTPGA---AYGDIRLGRVSNIPFKLDSTQ---PSPEKRKEYFDRFVSKTPMPRSLWYPTTRVLR-YYDRYDSGAVHIAKEEDKAFLEHVRRCYEVDLVDVETEAVFDPVANSGSFTMEIILLRKLITRGTSLAAR-SPDLTPLVERCILNSVYKRPT----LAEMKSRHLSSLTAAAAAGVSGAGAGASSVL-GREFTPSTKDMGGYASIDVSLSGLINSVRDEETNSYIEGGQIHHPAKMLLELENLQHRSLVKQPDCLSVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLAPADGQRINEFRRCWFSPILNQFTAIDPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDCKSVTGETEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVVQYDASRNSGFPPLRRIRWWRVVLDESHTIATAKHATNEVRDIVSNRRWCMTGTPYISRFSDANGQLSFVGAGGAFRGSDLGDKGPNRETQVETVAFLRRVLFRHSQGMKLGGKSILGLPSITHKVEVLALPTKERKAYVDFEKGLQNDYIMVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLLVGDSATVGYDGEGPTPASVDAFCPICNDIIESPVRTKCGHIFCQACISSVLTKKEDDQGPCPKCKKTVRLDDLTHVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEMLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEP-----------------------------------------------------------------------------------------------------------------------------------------------------------LLNLALEKQAVGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAGSN--GIAGNIARDNAKNLKIDEYNALFGVKADNSAVLAELERRNARKYKKKAAKRK 1344
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI) HSP 1 Score: 1310 bits (3391), Expect = 0.000e+0 Identity = 799/1486 (53.77%), Postives = 933/1486 (62.79%), Query Frame = 2 Query: 209 GIEVISPWALKQIAASPAKKPEKDEKKEVKSEGIKRAAEASKKAEQSGEVLVTSKPAEGLDTEAAR-PAKRSKGAADDDLAVVGTTGTKKLPHNRFACTEHTFGGHNSSSSTYKERCSLCFCYVCDRLASDCVEWSDHCHARDTGPMKHSWKALRERAKVLLHSGKRPPVSGYYGPPSATSPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNILPNACNCEEFCKPVHQVFFSDRPYEPSKAKAALVYLNGLTAQQVQHVEDISIRSTVETMAQRKYDRRYFSTKMANSAKATLMTRLKTE--LEPTVRVAVVGGGKRNMTIAAKDPDRSVRSLFVAKWTPGSLNMVSPAVRLGGVSEIPFRLTPTANGLPS-ASDKKAYFERFVSTKPMAPTLWYSMHRVINDYSDRFDKGSVIIAKEEDKFLLSRLKNCYEQDLVDVEVTAKYDHNTNSGSYKLEIILLGKLLRRGTSLTPRT---STDFVPIVERVVLKRVYKAPLPSAAASQKKQARLATLSPNPSSAMVNG--------GVFEHP--VVPGREFTPSTKGYGGCSSLDVSLAGLIDSVRQEESNLNVKSGRIIHPAKMLVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSVGA--SEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQADQSRNGGFPPLRRIRWWRVVLDESHTIYQKSAD---VMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKR-NDLGDRGANSETQAETVAFLRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSDSGSGASSTASLDAFCPVCSEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------ASTPG--VVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEPVRWVHGLRCMRRIRVVSGRSSLGVYHMPLHCPTLFGPAPLWRFVLSLSLFLPLPLDVGVRAPCALPCHVFRFGPAHSHPVWLASRFPIPYTPLRGFFQLPTPLALFPQHCFVFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVSVHGCDHDQLLNLALEKQAVGRVYRLGQERPVTVTKLVLEDSIETRILALQKKQATQGAASAAT--TSGLNSQGVAGNIARDNAKNLRIEEYNALFGVTE 4531
G+EV+SPWALK A KKEVK+EG+KRAAEAS KA+QSGEV VT KP E ++ E AR PAKRS+G ++D+ VVGTTGT KLPHNRFACTE F G S S +KE+CSLCFCYVCDRLAS C+ W DHCHA D+GP K WK+LR RAK LL +G RPPVSG + +S + A +A VYLNGLT +QVQHVEDIS++ST++ Q+ + Y S SA A K E ++PTVRV GG+ N+ +A S F +W S + AVRLG + I FR+ G PS AS +K YF+RFVS KP+AP++W+S R + D F+ G + ++K D LL +LK YE++LVD++ +A Y TN+G + LEI+LL K + R T+L PR+ S D VP+VER +L RV+K S S P +VNG P V GR FTPS KGYGG +SLDVSL+GLIDSVR EE N NV+ RIIHPAKML+ELENLQHR+L KQPDCLTV LYEHQKQDAQWMMDQEML+GGSMQHLWAELPPH ANG+ + EFRRCWFSPILNQFT +P +S++KGGILCDEMGLGKTAATL LHL+HP +TPAPGVPLDEKEWG I G QA L ++ + EAP +WVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG R KDP FL+++DMVVTTYGVVQAD + N GF PLRRIRWWRVVLDESHTI ++ V LV+NRRWCMTGTPYISRFSDVNGQL F+GA G+F+ +DLGD+ ETQ ETVAFLRRVLLRHSQGM+L G SILGLPT+T+KVEVL + +KER+AY +FE+ +Q +Y++VRHRLR GSHTM VLTLLS FRQACSGGQL+VG +A+ G G S+ A+LDAFC +C+E+LE+PV T CGHTFCQACISS+LTK+ +DEGPCPRCK VRL DL G XXXXXXXX XXXXXXXX +S+PG VVMETKLKALV+KLA IHAKDPTSKSLVFSQFNSSL+WLKRTLPK+GFQFRTLTG+MSR QRT AL+AFA+DPPTTVFLLSVRSGAVGINLTQANNVFLLEP LLNLALEKQA+GRVYRLGQ RPVTVTKLVL+DSIETRILALQKKQAT+G+ASAA S +S GVAGNIARDNAK+L+I EYNALFGV+E
Sbjct: 56 GVEVLSPWALKMQA-----------KKEVKNEGLKRAAEASAKAQQSGEVQVTDKPPEMINEEVARRPAKRSRGGDEEDMEVVGTTGTAKLPHNRFACTELKFEGPEGSRS-HKEKCSLCFCYVCDRLASQCLVWYDHCHATDSGPRKKLWKSLRTRAKPLLQAGGRPPVSGRF----------------------------------------------------------------------SALYS---FTLGTAASAAVYLNGLTQEQVQHVEDISVQSTLDRAVQKTLLKEYPSGMKLMSAAAKTKAAKKHEDRMKPTVRVVATLGGRSNVAVAGFT--ESNPEPFKPRWKSWSWG--TTAVRLGAIKGIGFRI----GGFPSSASGRKEYFDRFVSPKPIAPSVWHSTKRQASP-GDCFESGRLFMSKNADAELLEQLKVAYERELVDIQASASYSSQTNTGCFSLEIVLLTKAVDRSTALNPRSGQSSFDMVPLVERCILNRVHKTN--SXXXXXXXXXXXXXXSGRPLQPVVNGVSAYGGGXXXXXGPGGTVAGRAFTPSNKGYGGRASLDVSLSGLIDSVRAEERNNNVEERRIIHPAKMLLELENLQHRSLAKQPDCLTVDLYEHQKQDAQWMMDQEMLEGGSMQHLWAELPPHHLANGRCSHEFRRCWFSPILNQFTTDNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPRTPAPGVPLDEKEWGPILGKQAEPLAYKKAQASVSPEAPGQWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRSKDPSFLSQFDMVVTTYGVVQADGASNVGFAPLRRIRWWRVVLDESHTIASSNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITNKVEVLTLSSKERKAYVDFEQGVQNDYIKVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLVVGASAA---GGGGSTPATLDAFCSMCNEILEAPVRTRCGHTFCQACISSVLTKSKDDEGPCPRCKTAVRLTDLTSVGGGSVATGXXXXXXXXKPEYXXXXXXXXXXXXXXXXXXXPXXXHSHSSSPGAGVVMETKLKALVEKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEP-----------------------------------------------------------------------------------------------------------------------------------------------------------LLNLALEKQAIGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAPSSSSSDGVAGNIARDNAKDLKIGEYNALFGVSE 1287
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI) HSP 1 Score: 932 bits (2409), Expect = 2.500e-310 Identity = 529/1033 (51.21%), Postives = 650/1033 (62.92%), Query Frame = 2 Query: 284 KKEVKSEGIKRAAEASKKAEQSGEVLVTSKP-AEGLDTE-----AARPAKRSKGAADDDLAVVGTTGTKKLPHNRFACTEHTFGGHNSSSSTYKERCSLCFCYVCDRLASDCVEWSDHCHARDTGPMKHSWKALRERAKVLLHSGKRPPVSGYYGPPSATSPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNILPNACNCEEFCKPVHQVFFSDRPYEPSKAKAALVYLNGLTAQQVQHVEDISIRSTVETMAQRKYDRRY---FSTKMANSAKATLMTRLKTELEPTVRVAVVGGGKRNMTIAAKDPDRS---VRSLFVAKWTPGSLNMVSPAVRLGGVSEIPFRLTPTANGLPSASDKKAYFERFVSTKPMAPTLWYSMHRVINDYSDRFDKGSVIIAKEEDKFLLSRLKNCYEQDLVDVEVTAKYDHNTNSGSYKLEIILLGKLLRRGTSLTPRTSTDFVPIVERVVLKRVYKAPLPSAAASQKKQARLATLSPNPSSAMVNGGVFEHPVVPGREFTPSTKGYGGCSSLDVSLAGLIDSVRQEESNLNVKSGRIIHPAKMLVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSV-GASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQADQSRNGGFPPLRRIRWWRVVLDESHTIY---QKSADVMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKRNDLGDRGANSETQAETVAFLRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSDSGSGASSTASLDAFCPVCSEVLESPVTTHCGHTFCQ-ACISSMLTKND 3331
KKEVK+EG+KRAAEAS A+QSGEVLVT KP AE ++ E A+RPAKRSKG ++D+ VVGTTGT KLPHNRFACTEH F G SS +KE+CSLCFCYVCD AS+C+ W DHCHA DTGPMK SWK LRERAK L +GK PP+ + ++ +T ST++ Q+++ RRY + +A A+ ++ R + L+P VR ++ GKR++T+A D + S R F WTPG+ + A+R G VS IPF+L T PS +K YF+RFVS PM +LWY RV + Y DR+D G+V IAKEEDK L ++ CYE DLVDVE A +D N+GS+ +E+ILL K++ RGTSL R S D P+VER +L RV+K P ++ K L++L+ ++ + G V+ GREFTPSTK YGG +S+DVSL+GLI+SVR EE+N ++ G+I HPAK +GQR +EFRR WFSPILNQFT V+P +S++KGGILCDEMGLGKTAATL LHL+HP KTPAPGVPLDEKEWG I G QA LTD +SV G E P KWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG+R+KDP FLAK+D+VVTTYGVVQ D SRN GFPPLRRIRWWRVVLDESHTI + +V +++NRRWCMTGTPYISRFSD NGQL F+GAG +F+ +DLGD+G N ETQ ETVAFLRRVLLRHSQGM+L GKSILGLP++THKVE L +PTKER+AY +FEK LQ +Y++VRHRLR GSHTM VLTLLS FRQACSGGQL+VGD+A+ S+ AS+DAFCP+C++++ESPV T CGHTFCQ C+ +L ++
Sbjct: 138 KKEVKNEGVKRAAEASAMAQQSGEVLVTDKPPAEKINQEEQEEGASRPAKRSKGGDEEDMEVVGTTGTAKLPHNRFACTEHKFDGPQGSSG-HKEKCSLCFCYVCDLPASECLAWGDHCHATDTGPMKSSWKLLRERAKAYLRAGKPPPM-------------------------------------------------------------------------------------------IASVSSMT-------------STLDREVQKRFQRRYPGATGSALAPLARHNILARFASGLKPNVRTVILPNGKRDVTVACNDREASYAAARLPFKELWTPGTAH---GAIRFGRVSNIPFKLDSTQ---PSPEKRKEYFDRFVSKTPMPRSLWYPTTRVPS-YYDRYDSGAVDIAKEEDKAFLEHVRRCYEVDLVDVETEAVFDPVANAGSFTVEVILLRKVITRGTSLAAR-SPDLTPLVERCILNRVHKRPT----LAEIKSRHLSSLTAAAAAGVSGAGAGASSVL-GREFTPSTKDYGGYASVDVSLSGLINSVRDEETNSYIEGGQIHHPAK-----------------------------------------------------------SGQRLNEFRRSWFSPILNQFTAVNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDRKSVTGEPEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVVQYDASRNSGFPPLRRIRWWRVVLDESHTIATAKHATNEVRDIISNRRWCMTGTPYISRFSDANGQLSFVGAGSAFRGSDLGDKGPNRETQVETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEALALPTKERKAYVDFEKGLQNDYIKVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLLVGDSATVGGDGDGSTPASVDAFCPICNDIIESPVRTKCGHTFCQLVCVMVVLVSSE 993
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI) HSP 1 Score: 501 bits (1289), Expect = 1.050e-150 Identity = 259/416 (62.26%), Postives = 305/416 (73.32%), Query Frame = 2 Query: 1838 PGREFTPSTK---GYGGCSSLDVSLAGLIDSVRQEESNLNVKSGRIIHPAKMLVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPH--ANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSV-GASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG-SRKKDPEFLAKYDMVVTTYGVVQADQSRNGGFPPLRRIRWWRVVLDESHTIYQKSAD---VMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKRNDLGDRGANSETQAETVAFLRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQK 3055
PGR+F PS GYGG SS DV+L GLI+SVR EE + ++ S + +P ++L LEN+QH AL KQPDCLTVQL+EHQ Q QWM DQE+L+GG+MQHLW ELPPHP AN R+ EFRRCW+SP LNQFT+ +P + KGG+LCDEMGLGKTAATL LHL+HP +TP+PGVPLDEKEWG I G QA + +S G ++AP K VS GTLVVCKVSLVGQWVEEAKRLCG ALSIY YHGG RKKDP FLAK+DMVVTTYG+VQ VLDESH++ S V LVANRRWCMTGTP+ S+FSD+N QL F+G GSF+ DLGD+ N++TQ E AFLRRV+LRHSQGM+L S+LGLPT+THKVEVL P KE EAY +FE +QK
Sbjct: 480 PGRKFRPSKPAHLGYGGQSSTDVTLEGLINSVRAEERSPSIVSKLVHNPTELLKVLENVQHGALIKQPDCLTVQLFEHQLQATQWMYDQEVLEGGAMQHLWVELPPHPQMPANHDRSCEFRRCWYSPALNQFTVKNPFKAGTKGGLLCDEMGLGKTAATLALHLIHPPQTPSPGVPLDEKEWGPITGKQATPMVAPKSTSGGTKAPGKVVSTGTLVVCKVSLVGQWVEEAKRLCGSALSIYAYHGGYHRKKDPAFLAKFDMVVTTYGIVQ--------------------VLDESHSLNHGSGSSNAVRELVANRRWCMTGTPFTSKFSDLNRQLSFVGVAGSFRDRDLGDKRPNTDTQVEVTAFLRRVVLRHSQGMKLGANSLLGLPTITHKVEVLTPPPKELEAYHDFENTIQK 875
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A835YWG4_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA) HSP 1 Score: 516 bits (1329), Expect = 2.790e-149 Identity = 328/728 (45.05%), Postives = 423/728 (58.10%), Query Frame = 2 Query: 1871 YGGCSSLDVSLAGLIDSVRQEESNLNVKSG---------RIIHPAKM------LVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELP-PHPHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSVGASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQADQ----------SRNGGFPPLRRIRWWRVVLDESHTIY---QKSADVMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKRNDLGD-RGANSETQA---ETVAFLRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSDSGSGASSTASLDAFCPVCSEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXAS-------------------------TPGVVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEP----------VRWVHGLRCMRRIRVVS 3850
Y ++ DVSL GL+ + R+ + + G ++ P + E+ENL H L +QP+ LTV LYEHQ+Q +WM+DQE L G QHLWA P P P + + WFSP+LN FT +DP KGGILCDEMGLGKTA TL LHL++ KT DE EWG+I +TD + ASE A VSKGTLVVC VSLVGQWVEEA+RLC LSIYPYHGGSR KDP+ LA+YD+VVTTYG+ + D R G PPL+ I +WR VLDESHTI + SA V +++NRRW ++GTP S D+ GQL + G R+ L R A+S + + + FLR +++RH+Q L+G+ ILGLP + + ++K ER AY + EK LQ +Y VR+ LR+ GSH+M VLTL+S +RQACSGG +I + + +G +DA CP+C+E+L++P T C H FC CI++ +TK D+G CP+CKK V L ++ G XXXXXXXX A GVVME+KLK LV LA I KD +K+LVFSQF S+L +L+R LP+ GF+FRTLTG MSR+QRT AL F DPPTT+FLLSVRSGA GINLT A++VF+LEP + VH L R + VV
Sbjct: 758 YDKHANSDVSLEGLLLAARRNAYAIEQRLGLDEQACDFRKMKKPRTFASVTGFMQEIENLGHAPLDQQPEELTVTLYEHQRQGVKWMLDQEKLPHGISQHLWAPFPLPQPRPD-------EKIWFSPVLNAFTAIDPAGP--KGGILCDEMGLGKTACTLALHLLNQPKTDG-----DESEWGKINRHNL-DVTDKKR--ASEYGAH-VSKGTLVVCAVSLVGQWVEEARRLCDNKLSIYPYHGGSRTKDPKKLAQYDIVVTTYGICETDMRMHNKEGNVAGRPGRVPPLQAINFWRCVLDESHTIKTTNRLSAAVATIISNRRWLVSGTPANSNLGDLTGQLKNLDIGNL--RSALAPLRYADSSNEISVRQALPFLRSIMMRHTQAQTLNGRHILGLPPINKEAVLVKWAPHERTAYVKLEKELQSQYKSVRYLLRSAKGSHSMKVLTLMSQYRQACSGGAIINSAALAEAAAAGGQGATVMDALCPICNELLDTPAITTCNHVFCHLCITAHVTKKA-DKGTCPKCKKVVSLESIQLVGAGAXXXXXXXXEGSAATAGGGAPMGPNAGGVQGXXXXXXXXXXXXXXXXXDAPQQGGVVMESKLKVLVGMLAAIRGKDANAKALVFSQFTSTLRYLQRELPRHGFEFRTLTGDMSRRQRTKALEDFRSDPPTTIFLLSVRSGACGINLTAASHVFMLEPCLNLALEAQAIGRVHRLGQTRAVHVVK 1464
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A7S4MXR8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXR8_9STRA) HSP 1 Score: 353 bits (906), Expect = 2.190e-95 Identity = 231/663 (34.84%), Postives = 334/663 (50.38%), Query Frame = 2 Query: 1982 MLVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFR---RCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKT-PAPGVPL---DEKEWGRIAGDQA---------RTLTDNRSVGASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQAD------QSRNGGFPPLRRIRWWRVVLDESHTIYQKSAD---VMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAG---------GSFKRNDLGDRGANSETQAETVAF-------------LRRVLLRHS--QGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSDSGSGASSTASL--------DAFCPVCSEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPGVVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEP 3799
+L ELENL H P+ + LTV+L E Q+Q W +++E GG W +LP +G + R +F+P L+ + P + +GG + +MGLGKT +L L L +PA T P G D + G + D+ L+ ++ S+ A +S+GTLV+C VSLVGQW++EAK +Y YHGGSRK+D LA+ +VVTTY + +D +S + PP ++RWWR++ DESH + S ++ LV +WC+TGTP + +D+ Q+ F+G G N + + + ++ + +R +L+RHS Q R G S++ LP + + +K+R+ Y + E A ++ Y ++ R RN H + + L RQACSG A D SG D C +C E LE P T C H FC+ CI +L+ D+ GPCP C+ V++ LR A + PGV ++KL L+++L I + +P +KSLVFSQFNS++ W+K LPK GFQFRTL GSM+ K R AL F DPPTT+FLLS+R+GAVGINLTQAN VFL+EP
Sbjct: 774 LLNELENLGHAPAPR-TEGLTVELLEFQRQAVGWALERENAPGGFQAFGWTKLPRTVPGSGSQTPAGRVNEDLYFNPALDMLSRSPPKRA--RGGFISAQMGLGKTVISLALVLQNPAPTLPLSGTDARSDDVEMMGDDSNDRPGWAPKSRLNEELSHHKEFARSKKRASVLSRGTLVICNVSLVGQWIDEAKSKLRDPGLVYSYHGGSRKRDALILAEKSIVVTTYATLSSDAGHWAKKSGDEYCPPCEQVRWWRIICDESHVLKDMSKQTKAILDLVGENKWCVTGTPTNTSLNDLKNQMKFIGVDHTSLLFDMFGKTMENHAQPKSSGRSRRQRSIGYSVKRHECGNYLFLMRSMLIRHSMDQKYRATGVSLMSLPDKEERTIKIPFSSKDRKDYEKLESAAKQFYEGMKLRARNDLRRHYLKIFGALMPLRQACSG------VLAQHDKDSGGKKDKKACHRMSPEDDLECAICLENLEDPRATKCNHVFCRECIEGILSAEDDSTGPCPICRSEVKMSKLRRA-----------ILPEPEEEDGGKKGKKAKAKPGVAFKSKLNVLLRELERIRSDEPDAKSLVFSQFNSTIKWMKAELPKHGFQFRTLDGSMNMKDRAKALREFQSDPPTTIFLLSMRAGAVGINLTQANRVFLMEP 1416
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A7S2JRT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRT6_9STRA) HSP 1 Score: 325 bits (833), Expect = 5.860e-92 Identity = 219/634 (34.54%), Postives = 323/634 (50.95%), Query Frame = 2 Query: 1997 ENLQHRALPKQ-PDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPA-KTPAPGVPLDEKEWGRIAGDQARTLTDNRSVGASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQADQSR---NGG-------FPPLRRIRWWRVVLDESHTIY----QKSADVMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKRND----LGDRGANSETQA-----ETVAFLRRVLLRHSQGMR--LDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRL-RNLSGSHTMAVLTLLSSFRQACSGGQLIVGDT---ASSDSGSGASSTASLDAF--CPVCSEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPGVVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEP 3799
ENL H K D LTV+L Q+Q W +++E + GG W++LP N + ++SP L+ + P ++GG +C++MGLGKT +L + L +PA T G + E + + T + +G S S+GTLVVC VSLVGQWV+EAK +YPY+G +R +DP LA+ ++VTTY V+ +D R N G PP +RWWR++ DESH + +++ V RLVA +WC+TGTP + SD+ Q+ F+G + D LG G + + + +R +++RHS G+ ++ LP T + + + +ER+AY EK+ + Y R+R + + +A+L + R AC+GG + T A D G A D C +C + T CGH +C+ CI ++T D+ GPCP C++ + L LR +P V ++K + L+++L I +DP +KSL+FSQF ++L WL+ L K GFQFRTL+G M+ K R AL F DPPTTVFLLS+R+GAVGINLTQAN VF+LEP
Sbjct: 1 ENLGHPVSSKNLNDGLTVELRNFQEQAVSWAIERENVPGGIQSFWWSKLP-----NKVGIGDL---YYSPGLDMISPKPP--KLVRGGFICEQMGLGKTVISLSIILQNPAPSTLQSGTLVTEDALDTASNGWSSTDNCAQKIGESNKCGSIFSRGTLVVCNVSLVGQWVDEAKSKLKDPGLVYPYYGQNRNRDPIKLAQNSIIVTTYAVLASDMQRYERNKGKAGSKWDIPPCESVRWWRIICDESHCLRSSQTKQTQAVKRLVAENKWCVTGTPMNTNLSDLRSQMEFIGIENLNRMFDCFKGLGKTGGKNMPRCFRALERFLLVMRSMMIRHSMNQTNISSGRELMELPKKTERTIKITLTKEERKAYNTIEKSAMEFYRRLRMQEDERVFNRKYLAILQKMIPMRLACAGGPVSQNATQKCADIDKGDKDRFHAKPDEHTECSICLNDFDDARATACGHIYCKECIEGVITAMDSSTGPCPICRREINLEMLR-------------QVTFADNEVGDEENEGRDDSPDFVFKSKFEVLLRELRLIRVEDPEAKSLIFSQFKTTLKWLQTELVKHGFQFRTLSGDMTMKARAKALRDFQADPPTTVFLLSMRAGAVGINLTQANRVFILEP 611
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A1Y1I9A0_KLENI (DEAD-box protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9A0_KLENI) HSP 1 Score: 318 bits (816), Expect = 1.020e-85 Identity = 229/692 (33.09%), Postives = 329/692 (47.54%), Query Frame = 2 Query: 1892 DVSLAGLIDSVRQEESNLNVKSGRIIHPAKMLVELENLQHRALPK--QPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFRRCWFSPILNQFTMVDP--LSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSVGASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQAD---------------------QSRNGGFPPLRRIRWWRVVLDESHTIYQKSADVMR----LVANRRWCMTGTPYISRFSDVNGQLGFMGA-------------GGSFKRNDLGDRGANSETQAETVAFLRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIV-----------GDTASSDSGSGASSTASL--DAFCPVCSEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPGVVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEPV 3802
D L I+ +RQ ESN V R LE +Q + P+ QPD L V L +Q+Q ++M+D E GG +W ++P G +E ++ P L + +V L GG LC+EMGLGKT L L L +P P P Q + A P SK TLVVC VSLVGQW+ EAK +++Y YHG R DP FLA+ D+VVTTY + +D + +G PL + WWR+VLDESHT+ A R L A RRWC TGTP + SD+ GQ F+ G F+ G G++ +A V L +V++RH++ +++G+ +L LP T + +ER Y + Q+ + R G H + +++LL R+ CSGGQ+ + GDTA GA+ + D+ C +C +V+E P T C H FC C++ + + +G CP C++ V + D+ A+ P V E+KLKAL+ L +DPT+K+L+FSQF ++DWLK L + G ++R ++G M+ +R A+ F +DPPTTVFLLS+R+GAVGI LT A+ V+LLEPV
Sbjct: 422 DPVLCEQIEELRQLESNPAVTRIRSFDAL-----LEKVQSTSYPEEPQPDGLGVTLRPYQRQSLRFMLDNERRDGGFHGLMWRQIP------GAGTAE-EDVFYCPALQRLKLVTKGTLPPPTTGGFLCEEMGLGKTVEILALILANPHPNPPQLTP------------QVTIQQPTPPIPAGGVP----SKATLVVCAVSLVGQWISEAKGKLSAPINMYKYHGQGRSSDPFFLARQDIVVTTYATLGSDFNQCTKRRWAFREPGDNKPLTEEEHGRLSPLHAVNWWRIVLDESHTVKDPKAVHSRACAELTAERRWCCTGTPINTSISDLYGQFTFLKLSPFNTLATFQKEIGMPFEHASHG-HGSSGAGRAVLVDLLSKVMIRHTKSQKINGEELLVLPPKTQVDMPVHFSPEERVVYERATASAQERFSHFRKMGPMYIGRHMLQIMSLLLPLRRICSGGQIYLPQASADAPAEAGDTAPEAGPPGAAGLPDMPPDSECGICLDVMERPARTPCKHWFCHECLTGAIDSGPS-QGQCPICRQKVTVDDV--VEGVARGTTTAIVPYVEPEAGKDEAGPSGAAAP-FVAESKLKALLADLEKTREEDPTAKALIFSQFMGTIDWLKLKLTEAGVKYRYISGDMALNKRAKAIEQFQQDPPTTVFLLSIRTGAVGITLTSASVVYLLEPV 1080
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A7S1Z2T4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2T4_9STRA) HSP 1 Score: 317 bits (813), Expect = 4.280e-84 Identity = 225/692 (32.51%), Postives = 344/692 (49.71%), Query Frame = 2 Query: 1841 GREFTPSTKGYGGCSSLDVSLAGLIDSVRQEESNLNVKSGRIIHPAKMLVELENLQHRALPKQPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAP-----------GVPLDEKEWGRIAGDQARTLTDNRSVGASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLAKYDMVVTTYGVVQAD------QSRNGGF-PPLRRIRWWRVVLDESHTIY----QKSADVMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAG------GSFKRNDLGDRGANSETQAETVAFLRRVLLRHS--QGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSDSGSGASSTASLDAF------CPVCSEVLESPVTTHCG---HTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPGVVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEP 3799
G E G D+ L L +++R + +++++ + + L +LENL H P L ++L Q+Q W +++E +GG HLW ++P P QR S + +FSP L+ F+ P ++GGIL +EMGLGKT +L L L++PA PAP G P + G G + T S S+GTLVVC VSLVGQW +EAK I YHG +R+K+ LAK +VVTTY + +D +S + + PP +IRWWR++ DESHT+ + S + LV +WC+TGTP + +D+ QL F+G G F + G + + + + +R +++RHS Q R +GK ++ LP+++H + +ER Y + E Y ++ R + V + L+ R AC+GGQ++ D+ ++ A+ T C +C + +P T C H FC+ CI ++ + GPCP C++ V++ +L A ++K+ L+Q+L + +DP +KSL+FSQF S+L+W+KR LP GFQ+RTL+G M+ +R AL F D +TVFLLS+R+GAVGINLTQAN VFL+EP
Sbjct: 731 GHELNTDRSGLSYLCGKDLPL--LQENLRNSVTAIDLRTNTL---SGWLQQLENLGHNPCPA-VSGLNIELLAFQRQAVGWAIERENTEGGVQSHLWVKIPA-PSDGRQRKS--KDVYFSPALDMFSHHAP--EKVRGGILAEEMGLGKTVISLALVLLNPAP-PAPESGTKVASFDLGKPDTSMQNGWTKGGKTGRPTSENSASRGSI----FSRGTLVVCNVSLVGQWTDEAKSKLKDPGLICSYHGTNREKNATILAKNAIVVTTYATLASDAFYHKNKSNSTRYCPPCEKIRWWRIICDESHTLKDGNTRNSIALGGLVGENKWCVTGTPMNTSIADLRNQLAFVGIQHTKAMFGVFNSSSDG----SDDWKGSFLFTMRNLMMRHSMKQKQRANGKDLMSLPSISHHTIRIPFSLEERSEYKKLEDKALGVYKGLKKRGMKEVRKRYLLVTSALTPLRIACAGGQILENDSKEAN----ANKTGKKHVIDPENTTCSICQDCFVNPRATQCKPSPHVFCEECIEGVIGIKGS-AGPCPLCRQPVKMSNLLCAEFPEVCHSEEKKSSKDETKNMCQF----------AFKSKVSRLLQELKKVRDEDPKAKSLIFSQFKSTLEWIKRELPMHGFQYRTLSGDMAMSKRAKALRDFQNDSASTVFLLSIRAGAVGINLTQANRVFLMEP 1387
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Match: A0A8J9RP02_9CHLO (Probable helicase-like transcription factor at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RP02_9CHLO) HSP 1 Score: 317 bits (812), Expect = 8.500e-84 Identity = 221/622 (35.53%), Postives = 325/622 (52.25%), Query Frame = 2 Query: 2027 QPDCLTVQLYEHQKQDAQWMMDQEMLKGGSMQHLWAELPPHPHANGQRASEFRRCWFSPILNQFTMVDPLSSSIKGGILCDEMGLGKTAATLVLHLVHPAKTPAPGVPLDEKEWGRIAGDQARTLTDNRSVGASEAPAKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGSRKKDPEFLA-KYDMVVTTYGVVQAD--------QSRNGGFPPLRRIRWWRVVLDESHTIY----QKSADVMRLVANRRWCMTGTPYISRFSDVNGQLGFMGAGGSFKRNDLGDR--------GANSETQAETVAF-LRRVLLRHSQGMRLDGKSILGLPTMTHKVEVLKMPTKEREAYGEFEKALQKEYVRVRHRLRNLSGSHTMAVLTLLSSFRQACSGGQLIVGDTASSD--------SGSGASSTASLDAFCPVC-SEVLESPVTTHCGHTFCQACISSMLTKNDNDEGPCPRCKKTVRLGDLRFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXASTPGVVMETKLKALVQKLADIHAKDPTSKSLVFSQFNSSLDWLKRTLPKKGFQFRTLTGSMSRKQRTDALSAFARDPPTTVFLLSVRSGAVGINLTQANNVFLLEP 3799
QP LTV+L+ +Q+Q ++M+D E+ +GG +H W P+ +G W+SP+ N+ + ++ GG L +EMG GKT L L L +PA AP V + G+ VS+ TLVVC VSLVGQW+EEAK G+L +Y YHG R KDP LA YD+VVTTY + +D + +G F PL +I+W RVVLDESHT+ Q++A L A+RRWC +GTP + S+ GQ F+G +N G + A + + L R L+RH+Q RL G ++ LP T + ++ E+ Y K + E+ + + + + +A+++LLS R CSGG L D + +G + A L+ C +C + +E P T C H FC+ CI++ L + CP C+ +++ L A + VV E+KL+AL+++LAD+ +DPT+K+L+F+QFNS+L+WL L ++G+ +RT++GSM K+R+ A+ AF RDPPTTVFLLS+RSGAVGINLT AN+VF+LEP
Sbjct: 873 QPPGLTVELHPYQRQSLRFMIDNELGEGGHRRHFWV---PYKTPSGFTF------WWSPLFNRASR--EVAPCPWGGFLAEEMGCGKTVEILALILSNPA---APNV----------------------ASGSVLPDGCIVSRATLVVCAVSLVGQWMEEAKSKLNGSLRMYQYHGQGRNKDPVTLATSYDLVVTTYQTLGSDWRMYNKKGSNTDGRFKPLGQIKWHRVVLDESHTVKAGGTQQTAACCALNADRRWCCSGTPISTEVSEFVGQFKFLGCQPFDNKNYFSCHIKPAWSAGGWQTTGGAVNLLYALGRTLIRHTQQQRLGGATVCKLPEKTEEAIAVEFSEAEQRLYLRVHKEAKAEFQKYANGGSMMVARNLLAIMSLLSPLRAICSGGLLRERDVRVPNKDQEEEVPNGVDPNLVAPLEE-CSICLNHDMERPCRTPCLHWFCRECITAELAVREK----CPLCRTELQVAQL----------VEGVSAAREEDEEVVGAAGSSAGSQAVVSESKLRALLKQLADMRERDPTAKALIFTQFNSTLEWLMARLTEEGYSYRTISGSMPLKKRSQAIDAFQRDPPTTVFLLSMRSGAVGINLTAANHVFILEP 1443 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.950.1 >prot_C-linearis_contig105.950.1 ID=prot_C-linearis_contig105.950.1|Name=mRNA_C-linearis_contig105.950.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1563bp MAWWKQPTSKPSGSVVDMEEEEAVIDLTSETEESIRPPAASATPMDGIEVback to top mRNA from alignment at C-linearis_contig105:241302..267408+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.950.1 ID=mRNA_C-linearis_contig105.950.1|Name=mRNA_C-linearis_contig105.950.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=26107bp|location=Sequence derived from alignment at C-linearis_contig105:241302..267408+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:241302..267408+ >mRNA_C-linearis_contig105.950.1 ID=mRNA_C-linearis_contig105.950.1|Name=mRNA_C-linearis_contig105.950.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9378bp|location=Sequence derived from alignment at C-linearis_contig105:241302..267408+ (Chordaria linearis ClinC8C monoicous)back to top |