mRNA_C-linearis_contig105.935.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: D7FXU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU9_ECTSI) HSP 1 Score: 375 bits (962), Expect = 1.280e-123 Identity = 173/193 (89.64%), Postives = 184/193 (95.34%), Query Frame = 1 Query: 250 QSLEKPRKLNPLETLLKVYTQASGRRDATRPDRQYPFFTGLPLKPYFDRQTIRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSFRVDGVLCKGERAPWEDEIECKLFSPPIGGVGPSNEV 828 Q LEK RKLNPLETLL VYTQ S R+DA RPDRQYPFFTGLPLKPYFDR T+RTEEIPGVMWAFEQPQEFFNVSVNIRMTAV+LEGGGLWVHAPVAPT+EC+ LV+ELGEEVRYIVLPTTAFEHKVYVKPFSDRFP+A+VY+CPGQWSWP+NLPPSFRVDGVLC+GERAPWEDE ECKLFSPPIGGVGPSNEV Sbjct: 27 QGLEKKRKLNPLETLLMVYTQTSARKDA-RPDRQYPFFTGLPLKPYFDRPTVRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPVAPTEECVNLVEELGEEVRYIVLPTTAFEHKVYVKPFSDRFPRAQVYACPGQWSWPINLPPSFRVDGVLCEGERAPWEDEFECKLFSPPIGGVGPSNEV 218
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A835ZIS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS2_9STRA) HSP 1 Score: 355 bits (912), Expect = 8.400e-114 Identity = 193/386 (50.00%), Postives = 247/386 (63.99%), Query Frame = 1 Query: 277 NPLETLLKVYTQASGRRDATRPDRQYPFFTGLPLKPYFDRQTIRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSFRVDGVLCKG----------------ERAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAADEGEPPRADTPEARRQGWAKMCLQVLFLGPALPSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAFSGDAGENKEPAGFLQGLGLDRLLAGSAAGGRGQDSADPLAEVPEEDL 1386 +P +TL+ +Y SG + T DR+Y TGLPLKP+F+R+T R + G MW FEQ Q FFNVS NIRMTAV+L GGLWVHAPVAPT EC +L++E+GE V +IVLPTTA EHKVY++ F+ +P+A+V+ CPGQWSWP+NLP FRVDG+L K E PW D+I+ LFSPP+ G+GP+NE +FFHK S+TLLVTD VI I +PP I+ V LL ++ +EGEP DT ARR+GWAKM LQ+LFLGPA TF +VS+K+ VSPV+R L+R V+ FV EV + WP + + CH+ V AT DFR AF FAF + P G+ + Q DPLA +P +DL Sbjct: 65 SPWQTLVDMY---SGTK-TTHSDREYRLITGLPLKPFFERETRRYDAGQG-MWTFEQEQAFFNVSTNIRMTAVQLPSGGLWVHAPVAPTLECQRLLREVGE-VEHIVLPTTALEHKVYMRDFTRAYPKAQVWVCPGQWSWPINLPLRFRVDGMLVKKIHIPPRPIKLAPSLAQETPPWADDIDLALFSPPVMGLGPTNECVFFHKKSRTLLVTDTVIHIGVEPPDIIPVPALLASSVEEGEPLPPDTLAARRKGWAKMALQILFLGPATADTFQIVSQKIFVSPVIRIFVLQRAKASVRQFVDEVTK-WPFTR-IIPCHFKGPVAATPNDFRAAFSFAFDEEKPLKPPPQ---PRSGVQSFFGSLSLKQARQLPQDPLASIPAQDL 439
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: W7U319_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U319_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.050e-108 Identity = 195/432 (45.14%), Postives = 256/432 (59.26%), Query Frame = 1 Query: 271 KLNPLETLLKVYTQASGRRDAT----------RPDRQYPFFTGLPLKPYFDRQTIRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSFRVDGVLC---------KGE-----RAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPA-IVGVEGLLQAAADE------GEPPRADTPEARRQGWAKMCLQVLFLGPALPSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAFSGDAGENKEPA----GFLQGLGL-------DRLLAGSAAGGRGQDSADPLAEVPEEDLATLNSVNDFVVKYGLADE 1440 K NPL TL +VYT+ SG R +RQY TGLPLKPYF+R+T+R +I +W FEQPQ FFNV+ IRMT ++L G LWVHAPVA T EC +LV ELG +V YIVLPTTAFEHKV+V F+ +P A+VY+CPGQWSWP+NLPP FRVD L KG+ + PW +EIE +F PP G+GP+NEV+F HK+S+TLLVTD V+ I D P+ +V V LL+A+ D+ G P DTP RR+GWA+M LQ+LFLGP STF LV +L+VSPV+ T ++ + FV + W D + H++ P + + AF FA+ G PA G +G G DR++ G+ G R + E PE+D A L VN F++K G+A++ Sbjct: 63 KPNPLATLFEVYTRGSGDNAGVASDSPEEIRLRKERQYTLITGLPLKPYFERRTVR-RQIAKDIWTFEQPQGFFNVTTPIRMTVIRLSDGRLWVHAPVAATAECRRLVDELGGQVAYIVLPTTAFEHKVFVGGFARAYPAAKVYACPGQWSWPINLPPPFRVDAYLTDPRASSDGNKGKGGGTAQTPWANEIEHMVFEPPCIGIGPANEVVFLHKASRTLLVTDLVVYIDGDSPSPVVEVPDLLKASWDDPDAVPPGAPLPPDTPANRRKGWARMALQILFLGPTRFSTFKLVQRRLLVSPVIETFVYSKIPDALVDFVDRIATTW-DFTTVLPAHFNAPAPGSPTALQDAFAFAYR-LTGRRPSPARRMAGGTEGRGSNPFLALWDRVMEGAREGKRTE-------EYPEDDTAVLRFVNGFILKAGIANK 484
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A6H5K320_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K320_9PHAE) HSP 1 Score: 306 bits (783), Expect = 1.050e-96 Identity = 191/418 (45.69%), Postives = 206/418 (49.28%), Query Frame = 1 Query: 250 QSLEKPRKLNPLETLLKVYTQASGRRDATRPDRQYPFFTGLPLKPYFDRQTIRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSFRVDGVLCKGERAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAADEGEPPRADTPEARRQGWAKMCLQVLFLGPALPSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAF---------------SGDAGENKEP----AGFLQGLGLDRLL-AGSAAGGRGQDSADPLAEVPEEDLATLNSVNDFVVKYGLADEE 1443 Q LEK RKLNPLETLL VYTQ S R DA RPDRQYPF TGLPLKPYFDR T+RTEEIPGVMWAFEQPQEFFNVSVNIRMTAV+LEGGGLWVHAPVAPT+EC+ LV+ELGEEVRYIVLPTTA RV PYVK F SEVC+DWPD+KGF+ACHYSRRVPAT +DFR+AFGFAF SG AGE K+ GFL+ LGLDRLL AG GG D+ADPL VPE+DLATLN VNDFVVKYGLAD+E Sbjct: 31 QGLEKKRKLNPLETLLMVYTQTSARTDA-RPDRQYPFLTGLPLKPYFDRPTLRTEEIPGVMWAFEQPQEFFNVSVNIRMTAVRLEGGGLWVHAPVAPTEECVNLVEELGEEVRYIVLPTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------RVQPYVKEFASEVCRDWPDIKGFLACHYSRRVPATTQDFRRAFGFAFANVDGGKKASSPATGSGPAGEKKQAFGDAGGFLKSLGLDRLLKAGGGRGGGDGDNADPLDMVPEQDLATLNFVNDFVVKYGLADKE 283
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A8J4CPZ2_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4CPZ2_9CHLO) HSP 1 Score: 299 bits (765), Expect = 1.170e-90 Identity = 178/410 (43.41%), Postives = 235/410 (57.32%), Query Frame = 1 Query: 352 YPFFTGLPLKPYFDRQTIRTEEIPGVMWAFEQPQ--EFFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSFR---VDGVLCKGE-RAPWEDEIECKLFSPPIGGVGPS---NEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAADE------------------GEP-PRADTPEARRQGWAKMCLQVLFLGPALPST----FGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAFSGDAGENKEPA---------------GFLQGLGLDRL--LAGSAAGGR--GQDSADPLAEVPEEDLATLNSVNDFVVKYG 1428 +PF PL P+F R+T+R E G +W FEQ Q E FNV +RMT +KL GGLWVHAPVAPT EC++L++EL V YIVLPT A+EHKV+V PFS RFP+A+VY P QWS+P+NLPP F G L G+ PW DEIE KLF PP GVG +EV FFHK S+TLLVTD V+ IP DPP ++ V+ LL+ A D +P P DTPEARR+GW +M L VL+ GP+ T F +S +L+V PV+ TL +V V +V E+C DW + + + CH++ + A +FR+AF FA+ E P GFL GL L + + S+ GGR +S + P +D+ TLNS+N+ ++ G Sbjct: 105 FPF----PLGPFFTRKTVRIEVERGSVWVFEQTQALELFNVYTPVRMTVIKLASGGLWVHAPVAPTDECVRLIKELDAPVEYIVLPTFAYEHKVFVGPFSRRFPKAKVYIAPYQWSFPLNLPPQFFGIFPTGELTTGDPNVPWADEIEQKLFLPPSIGVGSYVRFSEVAFFHKRSRTLLVTDAVVYIPDDPPEVIPVDALLETARDNFLARFISGGRTQQEVAAIAQPGPVEDTPEARRKGWQRMALLVLYFGPSNLLTPEDSFAAISNRLIVGPVVETLVYSKVPKSVVDWVEEICADW-NFRQIIPCHFAAPIRAGPGEFRRAFAFAYQQAEAEGLMPPRXXXXXXEKSLLPLPGFLGGL-LSAIGGVVVSSGGGRTAASESLERPVVFPSDDMKTLNSLNETLLSLG 508
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A078H858_BRANA (BnaA01g33250D protein n=7 Tax=Brassiceae TaxID=981071 RepID=A0A078H858_BRANA) HSP 1 Score: 295 bits (755), Expect = 3.360e-90 Identity = 171/413 (41.40%), Postives = 241/413 (58.35%), Query Frame = 1 Query: 268 RKLNPLETLLKVYTQASGRRDATRPDRQYPFFTGLP--LKPYFDRQTIRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSF----RVDGVLCKGERAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAAD--------EGEP----PRADTPEARRQGWAKMCLQVLFLGPAL----PSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFA--FSGDAGENKEPAGFLQGLGLDRLLAGSAAGGRGQDSADPLAEVPEEDLATLNSVNDFVVKYG 1428 RK+ T+ T + D R + Y FTG P L P+ +R+TIRTE + G +W FEQ Q F +VS NIRMT +KL+ GGLWVHAP+APT+EC++L++ELG V YIVLPT A+EHK++V PFS +FP+A+V+ P QWSWP+NLP F R + PW DEIE K+ S P G+GP EV F+HK S+TLLVTD VI +PR PP+ + E LL +A + +G+ P DTP R++GW +M LQ+LFLGP+ ++F +S+KL+VSP+++TL +V V+ ++ E+ DW K + H+ V A +F AFGF G+ N+ P+ + L L G AA + P +D+ TL+S++ F+V G Sbjct: 45 RKMKGPVTVSAASTSKTVVTDGDRSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKTIKDGDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISSESLLASAKNGLAVKILSKGKQVPNDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIEEIASDWR-FKRIIPAHFEAPVNAGRSEFLAAFGFLDDLLGERYVNRPPSLSI----LFTSLMGKAA-----------SYFPPDDMRTLSSLDQFLVSVG 441
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A0D3AG30_BRAOL (Uncharacterized protein n=24 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3AG30_BRAOL) HSP 1 Score: 293 bits (751), Expect = 1.140e-89 Identity = 168/402 (41.79%), Postives = 236/402 (58.71%), Query Frame = 1 Query: 301 VYTQASGRRDATRPDRQYPFFTGLP--LKPYFDRQTIRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSF----RVDGVLCKGERAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAAD--------EGEP----PRADTPEARRQGWAKMCLQVLFLGPAL----PSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFA--FSGDAGENKEPAGFLQGLGLDRLLAGSAAGGRGQDSADPLAEVPEEDLATLNSVNDFVVKYG 1428 V A + R + Y FTG P L P+ +R+TIRTE + G +W FEQ Q F +VS NIRMT +KL+ GGLWVHAP+APT+EC++L++ELG V YIVLPT A+EHK++V PFS +FP+A+V+ P QWSWP+NLP F R + PW DEIE K+ S P G+GP EV F+HK S+TLLVTD VI +PR PP+ + E LL +A + +G+ P DTP R++GW +M LQ+LFLGP+ ++F +S+KL+VSP+++TL +V V+ ++ E+ DW K + H+ V A +F AFGF G+ N+ P+ + L L G AA + P +D+ TL+S++ F+V G Sbjct: 51 VTVSADSTVEGDRSKQFYINFTGFPFPLGPFLNRRTIRTEAVKGSIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIEELGAPVEYIVLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKTIKDGDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISSESLLASAKNGLAVKILSKGKQVPNDPVVDTPNTRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDEIASDWR-FKRIIPAHFEAPVNAGRSEFLAAFGFLDDLLGERYVNRPPSLSI----LFTSLMGKAA-----------SYFPPDDMRTLSSLDQFLVSVG 436
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A1D1XFD8_9ARAE (Na(+)/H(+) antiporter nhaA (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XFD8_9ARAE) HSP 1 Score: 293 bits (749), Expect = 3.590e-89 Identity = 174/417 (41.73%), Postives = 244/417 (58.51%), Query Frame = 1 Query: 262 KPRKLNPLETLLKVYTQASGRRDATRPDRQYPFFTGLP--LKPYFDRQTIRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSF----RVDGVLCKGERAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAADEG-------------EPPRADTPEARRQGWAKMCLQVLFLGPAL----PSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAFSGDAGENKEPAGFLQGLGLDRLLA---GSAAGGRGQDSADPLAEVPEEDLATLNSVNDFVVKYG 1428 KPR L V + +SG A+ +R Y FTG P L P+ +R+TIRTE + G +W FEQ Q F +VS NIRMT +KL+ GGLWVHAP+APT+EC++LV+ELG V YIVLPT A+EHK++V PFS +FPQA+++ P QWSWP+NLP F R + + APW +EIE K+ S P G+GP EV F+HK S++LLVTD VI +PR PP + E LL A+A G + P D R++GW +M LQ+LFLGP+ ++F +S+KL+VSP+++TL +V V+ +V + +DWP + + H+S + A+ DF AF F GE F+ L LL+ G AA + P +D+ TL+S+++F+V G Sbjct: 52 KPRSQRRDAASLVVASASSGTSSASS-ERFYLNFTGFPFPLGPFLNRRTIRTEAVKGCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELGAPVEYIVLPTFAYEHKIFVAPFSRKFPQAQIWVAPRQWSWPINLPLEFFGIFRAKPLKDEDTSAPWANEIEQKVLSSPEVGIGPYVEVAFYHKGSRSLLVTDAVIFVPRQPPECISKESLL-ASAKNGLAVKLLSKGKEVPQEPVVDNMSNRQKGWERMVLQILFLGPSNLLEPTASFTQMSQKLIVSPIVKTLVFSKVPEKVRDWVDMIAKDWP-FRRIIPAHFSAPINASRSDFLAAFAF-LDELLGER-----FVTRPSLSLLLSSLMGKAA-----------SYFPPDDMKTLSSLDEFLVSVG 448
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A836C2U5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2U5_9CHLO) HSP 1 Score: 295 bits (754), Expect = 1.460e-88 Identity = 181/406 (44.58%), Postives = 228/406 (56.16%), Query Frame = 1 Query: 346 RQYPFFTGLP--LKPYFDRQTIRTEEIPGVMWAFEQPQ--EFFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSFRVDGVLCKGE------RAPWEDEIECKLFSPP-IGGVGPS---NEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAAD--------------EGEP-----PRADTPEARRQGWAKMCLQVLFLGPALPST----FGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAFSGDAGENKEP---------AGFLQGLGLDRLLAGSAAG-GRGQDSADPLAEVPEEDLATLNSVNDFVVK 1422 + Y FTG P L P+F R T+R E G +W FEQ Q +FFNV +RMT +KL GGLWVHAPVAPT EC++L++EL V YIVLPT A+EHKV+V PFS RFP+A+VY PGQWS+P+NLPP F G+ GE APW DEIE K+F PP +GGV EV FFHK ++TLLVTD VI +P PP ++ + LL A D E E P DTPE R+GW +M L VL+ GP+ T F VS++L+V PV+R L RV V +V +C DW D K + CH V A D R+AF FAF + P GFL G+ L L G G G G A P+ + P+EDL L+ +N+ + K Sbjct: 118 QDYFNFTGFPFPLGPFFSRNTVRREIEKGQVWVFEQTQALDFFNVYTPVRMTVIKLASGGLWVHAPVAPTSECLRLLKELDAPVEYIVLPTFAYEHKVFVGPFSRRFPEAKVYIAPGQWSYPINLPPQFF--GIFPAGELLTDDASAPWADEIEQKVFLPPSLGGVDDFVRFTEVAFFHKRTRTLLVTDAVIYVPDTPPEVIPRQALLAQAKDGFLARFKTGGKTKQEVEAIAKTGPVEDTPENLRKGWMRMVLLVLYFGPSNLLTPEESFAAVSQRLMVGPVVRELVYNRVPKSVSDWVESICTDW-DFKQIIPCHMDAPVKAGPADLRRAFAFAFESAEAQGLLPPKPEPEPVRGGFL-GINLGNLFGGFKLGLGNGSGDAKPV-DFPKEDLEVLDFINEQLNK 518
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Match: A0A7I8L2D3_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L2D3_SPIIN) HSP 1 Score: 290 bits (743), Expect = 1.850e-88 Identity = 164/401 (40.90%), Postives = 230/401 (57.36%), Query Frame = 1 Query: 298 KVYTQASGRRDATRPDRQYPFFTGLP--LKPYFDRQTIRTEEIPGVMWAFEQPQE--FFNVSVNIRMTAVKLEGGGLWVHAPVAPTQECMKLVQELGEEVRYIVLPTTAFEHKVYVKPFSDRFPQARVYSCPGQWSWPVNLPPSF----RVDGVLCKGERAPWEDEIECKLFSPPIGGVGPSNEVIFFHKSSKTLLVTDCVICIPRDPPAIVGVEGLLQAAA------------DEGEPPRADTPEARRQGWAKMCLQVLFLGPAL----PSTFGLVSEKLVVSPVLRTLTLKRVLPYVKGFVSEVCQDWPDVKGFMACHYSRRVPATARDFRKAFGFAFSGDAGENKEPAGFLQGLGLDRLLAGSAAGGRGQDSADPLAEVPEEDLATLNSVNDFVVKYG 1428 +V A G +R Y FTG P L P+ +R+T RTE + +W FEQ Q F +VS NIRMT +KL+ GGLWVHAP+APT+EC++L++ELG V YIVLPT A+EHK++V PFS +FP+A+++ P QWSWPVNLP F R + + PW DEIE K+ S P G+GP E F+HK S+TLLVTD VI +PR PP + E LL AA D + P D +R++GW +M LQ+LFLGP+ ++F +S+KL+VSP+++TL +V V+ ++ + +DWP K + H++ V A+ DF AF F D + PA L + G AA + P +D+ TL+S++ F+V G Sbjct: 49 RVVASAEGGSSGVGGERFYLNFTGFPFPLGPFLNRRTTRTEAVKDCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLIKELGAPVEYIVLPTFAYEHKIFVGPFSRKFPRAKIWVAPRQWSWPVNLPLEFFGIFRSKPLKDEDSSTPWADEIEQKILSSPEVGIGPYVEAAFYHKRSRTLLVTDAVIFVPRQPPECISKESLLAAAENGLAVKILSKGRDVPQEPVVDNKSSRQKGWERMVLQILFLGPSNLLEPTASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDRITRDWP-FKRIIPAHFAAPVNASRSDFLAAFTFL---DELLGERPAARPSFSLLLAAVMGRAA-----------SYFPPDDMKTLSSLDQFLVSVG 434 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.935.1 >prot_C-linearis_contig105.935.1 ID=prot_C-linearis_contig105.935.1|Name=mRNA_C-linearis_contig105.935.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=465bp MHLRVISSLILLRECASFVSTPVIHTHERGRGDTRVQHDVRYHGRAHTLLback to top mRNA from alignment at C-linearis_contig105:108345..114018- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.935.1 ID=mRNA_C-linearis_contig105.935.1|Name=mRNA_C-linearis_contig105.935.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5674bp|location=Sequence derived from alignment at C-linearis_contig105:108345..114018- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:108345..114018- >mRNA_C-linearis_contig105.935.1 ID=mRNA_C-linearis_contig105.935.1|Name=mRNA_C-linearis_contig105.935.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2790bp|location=Sequence derived from alignment at C-linearis_contig105:108345..114018- (Chordaria linearis ClinC8C monoicous)back to top |