mRNA_C-linearis_contig105.932.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 670 bits (1728), Expect = 1.150e-236 Identity = 365/549 (66.48%), Postives = 408/549 (74.32%), Query Frame = 1 Query: 28 VVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTN-------------GFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAA----------------------------------------RPRMSAFEPAAAAHAEDAQASGVAGVSMDDKRQQYATIVDLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 +V LNK+AKVP R+ LLSRMRAVK LE+EVALMLD EFVAITTDGWTSR NESYMSLTVAYI+ EW+L HLSLDCAKHTGTTTGEDLA L+AGM+E HDLTGRV ACVTDCEPSM+KAGRLLEV G TISH+GC+NHRMESTTSSVFNGRSL A+ LARTLVGRYKKSSQMAARL LCGIL++ L VMQ+VETRWWSTWAM+ RLLYL KAIK+HES+D V PLLSD DWEVL+L+EPIL PFM+ QKDLEGA+YVTGSMTI +A+LR+G++ AI +L+ ++QGL T QKAME+V PDAE L+ D TNRWGDG+N GFK QV+AT LDPR KHLYGIQ EH VWRAVA AA RPRMSAFE AAAA S D+KR+Q IVD+EV+AFKAAPGIRV + + T T VF NPLD WRK+QLEYPLLAALARRVLAIPSSQAQSER+FSTAGLTVTP RS L D NVELLVYL Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFE-AAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGD-----KKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 588 bits (1516), Expect = 8.910e-205 Identity = 314/535 (58.69%), Postives = 384/535 (71.78%), Query Frame = 1 Query: 1 FVEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTN-------------GFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAA---------------------------------------RPRMSAFEPAAAAHAEDAQASGVAGVSMDDKRQQYATIVDLEVAAFKAAPGIRV----SESKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERM 1437 FVEYPEF VV LNKKA+ P R+ L+ +MR +K+ LE+EVALMLD+E+VAITTDGWTSR NESYMSLTVAYI+ W+L HLSL+C KHTG+T GEDLA+ I MIE H LTGRVTACVTDCEPSMVKAGRLLEVGG + H+GC+NHRMESTTSSVFNG+SL A++ AR +VGRYK+SSQM+ RLA GIL++ L V+Q+VETRWWS+WAMI RLLYL KAIK+HES D + P+LS+ DWEVL+L+EPIL PFM+ QKDLEGAKYVTGSMT+P I +LR+G++ AI +LR R G++ + ++AME+VLPDAE L ED NRWGDG++ GFKL QV AT +DPR KHLYGI+ +EH +VWRAVA A R R+SAFE AAAAHA A AS G ++D+KR+Q A++VDLEVA+F+ PGI + ++ K V+ +PLDWWR RQ+E+P LAALARRVLAIPSSQA SER+ Sbjct: 28 FVEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHA-GAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGK------------KVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 318 bits (814), Expect = 1.120e-99 Identity = 207/515 (40.19%), Postives = 292/515 (56.70%), Query Frame = 1 Query: 4 VEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNAS--RQGLTTTRQK----AMESVLPDAEGLLEDLTNRWGDGTNGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAARPRMSAFEPAAAAHA-EDAQASGVAGVSMDDK---RQQYATIVDLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 VE F +V+ L +A VP ++ L ++R +K+GL+ EV L E VA+T+DGWTS N++YM T YI+S ++L L ++C KH G TTGEDL + + MI + LT R A TDCEPSMVKAGRLLE G ++H+GC HR+ES TS F G + +A++LAR +V RY SSQ + RL + I+++ V+Q+VETRWWST+A I RLL L + I HE +D +PPLL ++DWEVLQ+VEP+ +PF+ +QK E +K VT S+ IP IA LRD + +A+ L+ + + + +K A + V P + ++E GFK QV AT LDPR K LYGI+ +EH VW AVA+ A + A A A ED Q++G + + + + AA A PG + + + + S RVL IP+SQ QSER+FS+AGL VT R+ + NVEL+++L Sbjct: 2 VENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEG-VTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSV-IVEP---------RGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVAN------EAVKVAIEAKATEDTQSAGASSSLIPVEPAAXXXXXXXXXXDFAAASAVPGDKQQSANASSSTS-------------------------------RVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 329 bits (844), Expect = 2.070e-99 Identity = 217/551 (39.38%), Postives = 289/551 (52.45%), Query Frame = 1 Query: 142 EFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTN-------------GFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVA-DAARPRMSA--------------------------------------------------------------FEPAAA----------------AHAEDAQASGVAGVSMDDKRQQYATIVDLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 E VA+T+DGWT N++YMS T YI+S ++L L L+C KH T GEDL + + MI + LTGR A TDCE SMVKAGRLLE G ++H+GC HR+ES TS F G + +A++LAR +V RY SSQ + RL +C I+++ V+Q+VETRWWST+ I RL+ L + I HE +D PPLL ++DWEVLQLVE +L+PFM QK LE +K VT + P IA L+DG+ +A+ L+ S + + A + V+ A+ L DL+ RWGD T+ GFK QV AT L PR K LYGI+ +EH VW A A +A + + A EPA AH + Q+ A S R+Q +I+ EV AFK PG+ VS + + G PL+WWR + EYP LA+LARRVL IP+ QAQSER+FS+AGL VT R+ + NV L+V+L Sbjct: 4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEG-VTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAE-AKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQS---ANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRG---------KPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 248 bits (633), Expect = 5.540e-74 Identity = 148/325 (45.54%), Postives = 192/325 (59.08%), Query Frame = 1 Query: 175 SRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTN-------------GFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAA 1107 S N++YM+ T YI+S ++L L L+ KH G TTGEDL + + MI + LTGR A TDCEP MVKAGRLLE G +SH+GC HR ES TS F G + +A++L R +V RY SSQ + RL +C I+++ V+Q+VETRWWST +D +PPLL+++DWEVLQLVEP+L PFM QK LE +K VT S+ IA LRD + +AI L+ S + + A + +L A L DL+ RW DGT+ GFK QV AT LDPR K LYGI+ +EH VW AVA+ A Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEG-VSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAE-AKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEA 309
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.610e-50 Identity = 137/375 (36.53%), Postives = 189/375 (50.40%), Query Frame = 1 Query: 28 VVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTIS-HVGCANHRMESTTSSVFNGRSLRAVS-LARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTN-------------GFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAA 1107 +V + A+VP++K ++ MR VK+ + +V+ +++ E V IT+DGWTS N++YMSLT I S W+L LS+DC+K GTTTG+ LA I + H LTG+VTA TDCEPSMVK GRLL G T+S +GC N+R+EST+S VFNG ++ V LAR LV RY SSQ A R L++ +K + +D R +D+ VTGS+ +P I LR+ ++DAI++L A +V+P + L +D +RWGDG N GFK V V AT LDPR K YG+ E VW+ V + A Sbjct: 1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLL-AGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADR-----------------------------------LKQFVKTYLGVDN-----------------------KRVIQDV-----VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNT-AWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEA 310
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: UPI0019556103 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019556103) HSP 1 Score: 153 bits (387), Expect = 3.450e-37 Identity = 139/525 (26.48%), Postives = 249/525 (47.43%), Query Frame = 1 Query: 4 VEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEV-ALMLDEEFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTD-------CEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSL-RAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAI-------KMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNGFKLVQVFATG--LDPRCKHLYGIQPSEHPAVWRAVADAARPRMSAFEPAAAAHAEDAQASGVAGVSMDDKRQQYATIV---DLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 VE F+ +++ L VP R + + + A GL+ +V AL+ E +++TTD WTS R ESYM++T +I+ +W+ Q L L+ + TG ++A ++ + ++ + G++ + V D C ++ ++ + E+ G V CA H ++ ++ + RAV+ +R LVG +KK + L + ++Q+V TRW ST++M+ RLL I + D L+ W ++ ++ +L+P + L + S T+P +A L+ +L A T + K+ L+E++ RW V+ T +DPR K L + ++ + VA A R++A +E+ Q V+ +DK ++ A ++ + ++ + ++ RV+E + + + T + PL WW+K Q YP LA +A+R+L IP++ SER+FS AG V RSCL NV++LV+L Sbjct: 7 VEGQGFKNLLKVLEPGYTVPARHTITNALTAKYEGLKDKVSALIQQSEALSLTTDMWTSLRMESYMTVTAHFIDGDWKAQSLVLETKQMEEAHTGINIAARLSEVADTFGIQGKIVSVVCDNAANMTLCVETLKESHKWAEMQG-----VRCAGHTLQLCINAALKQDPICRAVAASRHLVGHFKKGHKAKTGLKQKQEQQNVPQHELIQDVSTRWNSTFSMLERLLEQRWPITAVLSDPNFTKKSDSSTLDLTTAHWNAIEDIKNVLKPMTTLTELLSEEDNASLSATVPMLANLKK------RHLAIADDDSPITKKMKSK---------LVEEIDGRWEFKNRMMMTNSVYITAAVVDPRFKQLSFLDDAKRDEAYIVVAQLAE-RLNAVTGTGEPGSEEEQ--HVSKKQKNDKEKEIAMLLCEDEDDLISRESGGRSRVTE----EMKNYLQDRTKIDSGPLGWWKKNQDRYPSLARVAKRLLCIPATSTPSERIFSKAGFIVNKARSCLLPKNVDMLVFL 504
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6J1SJC7_FRAOC (zinc finger BED domain-containing protein 1-like n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SJC7_FRAOC) HSP 1 Score: 139 bits (351), Expect = 8.330e-32 Identity = 149/505 (29.50%), Postives = 220/505 (43.56%), Query Frame = 1 Query: 55 KVPDRKGLLSRMRAVKRGLETEVALMLDE-EFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVF--NGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESLDGVPPL-------LSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNGFKLVQV--FATGLDPRCKHLYGIQPSEHPAVWRAVADAARPRMSAFEPAAAAHAEDAQASG-VAGVSMD-----DKRQQYATIVDLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPNPLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 KVP + R+ + + V + L+E +F+++TTD WTSR +SY+SLT I WEL+ +L +G++LA + M DL GR T+ D ++V A ++ +S CA H ++ + N + A A+ +V + S++ L A + ++Q TRW ST+ M L + S V +S E+W L+ + P L+P L VT S P + L D V +++ +GL E V + LT R+ + + V+V A LDPR K L +PS PA + D A+ +M+ AA A +DA+ AG +D + A E A + A P I ++ PL WW+ RQ YP LA LARR LA+P++ A SER FSTAG TV PNRSCL NV +LV+L Sbjct: 157 KVPCATTMRKRLHELFCQVRENVQVALNELDFISLTTDCWTSRALDSYISLTAQAITKTWELRRYTLCTEGMDVNHSGDNLALALIDMCHEWDLEGRATSITRDNATNIVNAVNQVDFVEFNVS---CAAHLLQLCVNDGLKKNKPFMDACKKAKKVVAHFHHSTKATTALEAAQVTAGLKEAKLVQSCSTRWDSTYLMCKSLTESRAPVCAVLSDRNVTTAKQSRTLQMSAEEWAELEAMLPALKPLQVATTVLCADDKVTVSTVRPVVRSLLD-VHFKLDD------EGLLEL-DPCEEHVRDFKVEVSRSLTERFNMDASAVRPVEVQQLAAFLDPRYKDLRA-EPS--PAEAEKIRDLAKQKMAGE--AAVAVDQDAEGEAPAAGSGLDFLFCGEAEAAGARTWQAEYAEYVAEPQISHNQC------------------PLTWWKTRQKRYPTLARLARRYLAVPATSASSERDFSTAGNTVRPNRSCLLPENVSILVFL 627
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: A0A6J1Q6G9_9HYME (zinc finger BED domain-containing protein 1-like n=1 Tax=Temnothorax curvispinosus TaxID=300111 RepID=A0A6J1Q6G9_9HYME) HSP 1 Score: 135 bits (340), Expect = 1.370e-30 Identity = 138/502 (27.49%), Postives = 228/502 (45.42%), Query Frame = 1 Query: 55 KVPDRKGLLSRMRAVKRGLETEVALMLDE-EFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNG-RSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAI-------KMHESLDGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRW---GDGTNGFKLVQVFATGLDPRCKHLYGIQPSEHPAVWRAVADAARPRMSAFEPAAAAHAEDAQASGVAGVSMDDKRQQYATIVDLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPNPLD---WWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 KVP R+ + +RMR + +V LD+ + VAITTD WTS+ N+SY++L+ Y++ W ++L + T + T E L K I +++ +LT +VT V D ++VKA + L G +S V CA H ++ + ++ + + +V ++ S L L + L +MQ TRW ST+ M+ RL L I + +S L + +W + + +L+PF + L K +T S+ V+ I NL N R L +++ L DLT+R+ N AT LDPR K L +PSE + R ++ H A +G ++++Q +T++D + + E+ + +A T + N LD WW+ ++ +P +A +AR++L IP+S A +ER+F TAG V+ RSCL NV L++L Sbjct: 100 KVPSRRTIDNRMRTLYNEAAEQVRTTLDKVDAVAITTDAWTSKANDSYITLSAHYLDDNWIPHTVNLMTREMTESHTAEHLQKTIREVVQEWNLTNKVTGLVHDNASNIVKAAKELGDTDGMLS-VRCAAHTIQLSVNTALEAPECVSVIKKGAEIVSAFRHSYSRTTALEDKLKSLGLPTLRLMQRCPTRWDSTFFMLDRLQTLRSGIMAALSDRSVFKSAIAAKLELCEAEWVKVMQLTVLLKPFQQATTILCAEKSITLSI-----------VRLIIYNLIN--RHLLVKDDDSSLQRTFKVRAAL--DLTDRFKMKNINVNNEVTAMQMATLLDPRHKKLIA-EPSESVRSFIHTEVQRRTNLN--------HRHLATPNG-------NEQRQGSTVMDFLLG---------MDENHEGDDFAKYVAETQIDHN-LDLCAWWKAHEVCFPAVAKIARQLLCIPASSATAERVFYTAGNIVSAKRSCLLPENVSHLIFL 559
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Match: J9KD47_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KD47_ACYPI) HSP 1 Score: 137 bits (345), Expect = 1.410e-30 Identity = 130/512 (25.39%), Postives = 232/512 (45.31%), Query Frame = 1 Query: 4 VEYPEFRVVVQRLNKKAKVPDRKGLLSRM--RAVKRGLETEVALMLDE-EFVAITTDGWTSRRNESYMSLTVAYINSEWELQHLSLDCAKHTGTTTGEDLAKLIAGMIESHDLTGRVTACVTDCEPSMVKAGRLLEVGGGTISHVGCANHRMESTTSSVFNGRSLRAVSLARTLVGRYKKSSQMAARLAALCGILEIVALCVMQEVETRWWSTWAMIARLLYLEKAIKMHESL-DGVPPLLSDEDWEVLQLVEPILEPFMRTQKDLEGAKYVTGSMTIPNIAQLRDGVKDAINNLRNASRQGLTTTRQKAMESVLPDAEGLLEDLTNRWGDGTNGFKLVQVFATGLDPRCKHLYGIQPSEH--PAVWRAVADAARPRMSAFEPAAAAHAEDAQASGVAGVSMDDKRQQYATIVDLEVAAFKAAPGIRVSESKPTKTASGVMATTTVFPN--PLDWWRKRQLEYPLLAALARRVLAIPSSQAQSERMFSTAGLTVTPNRSCLADSNVELLVYL 1515 VE F+ V LN K+P+R + + A ++ + + +L+E + +TTD WTSR N+SY+++TV +IN+ + L+ + L T ++L++ I + +L ++ D ++ A +G H GC H + S KK + + ++ +C ++Q+V TRW ST+ M+ R + LE +I+ L D PP L+ ++W V++ IL PF + + G +Y+T S+ I IAQ G+K+ ++N + T + + + D + WG+ N K +++ T LDPR K+L I +EH +V + + +S + + ++AQ S ++ + +Q++ ++ + P I S S+ + + N PL+WW+ + YP L LARR+L S ER+FS AGL ++ R CL E+L++L Sbjct: 1265 VEDTGFKEFVNMLNPGYKIPNRHTISKTLIPAAYEKCVNDVKSTILNELDMACLTTDCWTSRDNKSYIAITVHFINNNFNLKSILLSFHSFIEKHTSDNLSEQIDKTLNEWNLRQKIV--FADNAYNIQNA-----LGHLKFKHFGCFAHTLNLIVQSAL------------------KKENDLIDKVKNICTHF------LLQDVATRWNSTFYMLERFVQLETSIRGTMGLLDSAPPCLNSDEWIVIKEFCNILRPFEEATRSVSGDQYITASLVIV-IAQ---GLKNVSEKMKNENYSFKTLRLVNNLLNGMRDRQN--------WGNIENS-KTLKI-CTFLDPRFKNLPFIH-NEHMLSSVKNDIVELTAQIISVHRSESTSIEQEAQTSNQPSDTLTPEVKQFSIWESIDKCVSQMQPSIGTSTSRAIVEVQRYIEEPVLKRNRDPLEWWQDHKYNYPYLNVLARRMLCCLGSSVPCERVFSKAGLLISDRRCCLNTKKAEMLLFL 1730 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.932.1 >prot_C-linearis_contig105.932.1 ID=prot_C-linearis_contig105.932.1|Name=mRNA_C-linearis_contig105.932.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=505bp FVEYPEFRVVVQRLNKKAKVPDRKGLLSRMRAVKRGLETEVALMLDEEFVback to top mRNA from alignment at C-linearis_contig105:70247..71917+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.932.1 ID=mRNA_C-linearis_contig105.932.1|Name=mRNA_C-linearis_contig105.932.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1671bp|location=Sequence derived from alignment at C-linearis_contig105:70247..71917+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:70247..71917+ >mRNA_C-linearis_contig105.932.1 ID=mRNA_C-linearis_contig105.932.1|Name=mRNA_C-linearis_contig105.932.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3030bp|location=Sequence derived from alignment at C-linearis_contig105:70247..71917+ (Chordaria linearis ClinC8C monoicous)back to top |