Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-27_000040.1 |
| Exons | 2 |
| Model size | 226 |
| Cds size | 222 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.2951047-CDS-C-linearis_contig104:427152..427332 | 1622927381.2951047-CDS-C-linearis_contig104:427152..427332 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 427153..427332 - |
| 1690879666.817624-CDS-C-linearis_contig104:427152..427332 | 1690879666.817624-CDS-C-linearis_contig104:427152..427332 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 427153..427332 - |
| 1622927381.3060584-CDS-C-linearis_contig104:427761..427803 | 1622927381.3060584-CDS-C-linearis_contig104:427761..427803 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 427762..427803 - |
| 1690879666.8273442-CDS-C-linearis_contig104:427761..427803 | 1690879666.8273442-CDS-C-linearis_contig104:427761..427803 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 427762..427803 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.905.1 >prot_C-linearis_contig104.905.1 ID=prot_C-linearis_contig104.905.1|Name=mRNA_C-linearis_contig104.905.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=74bp
ITGRRAIDNAGDPLYFGGDDRVWREPAPNQAQADTNPTPRASAPGSPLSA
GAEYRGDTFNSSLGLKESWSLQAV back to topmRNA from alignment at C-linearis_contig104:427151..427803- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig104.905.1 ID=mRNA_C-linearis_contig104.905.1|Name=mRNA_C-linearis_contig104.905.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=653bp|location=Sequence derived from alignment at C-linearis_contig104:427151..427803- (Chordaria linearis ClinC8C monoicous)
ATAACGGGTCGCCGTGCCATCGATAATGCCGGAGACCCACTGGTGATCCA
GTAGCACACGTCTAGTTGATCGGTAGTTTTGATTTTCAATGGCGGAATTA
ACACAGTAGTTGTATGGCCATGCAGTCTGGCTGTTAAATGTGTCGTGCTG
GCTTCTAGTGGTGTTAATACTTAAGACGTGGTATCTACGTCCGGTGTGTA
TGTGGATACCTGTGTGCGTTCACAATGGATACAGCAGACGTTGGCCCGTT
CGCCCTCTTTCTTCTCTCTCGTCCTTCTATACCTCGGTCTGTCTGTCTGT
CTGTTTGTATTCGTGTCCTAGTTCCTCAGTAGGTTCCATCTCCACGCTGT
TCTTAAGATGAATGTGTCGTTTCCGCTCTCATGTGCTCCGTATACTCAAT
TCAATTTTTCAGCTCATTGCTCATCGCCTTAATTTCCCGTGCTTCTCCGG
CTTGATCCGCCACGCTGACAGTACTTTGGCGGTGACGATCGAGTGTGGAG
GGAACCAGCCCCCAATCAAGCCCAGGCGGACACCAATCCGACCCCAAGAG
CGTCGGCACCAGGATCTCCCCTCTCAGCGGGCGCAGAATACCGAGGCGAT
ACCTTCAACAGCAGCCTCGGGCTGAAGGAATCGTGGTCCCTCCAGGCCGT
TAA back to topCoding sequence (CDS) from alignment at C-linearis_contig104:427151..427803- >mRNA_C-linearis_contig104.905.1 ID=mRNA_C-linearis_contig104.905.1|Name=mRNA_C-linearis_contig104.905.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at C-linearis_contig104:427151..427803- (Chordaria linearis ClinC8C monoicous)
ATAACGGGTCGCCGTGCCATCGATAATGCCGGAGACCCACTGATAACGGG
TCGCCGTGCCATCGATAATGCCGGAGACCCACTGTACTTTGGCGGTGACG
ATCGAGTGTGGAGGGAACCAGCCCCCAATCAAGCCCAGGCGGACACCAAT
CCGACCCCAAGAGCGTCGGCACCAGGATCTCCCCTCTCAGCGGGCGCAGA
ATACCGAGGCGATACCTTCAACAGCAGCCTCGGGCTGAAGGAATCGTGGT
CCCTCCAGGCCGTTTACTTTGGCGGTGACGATCGAGTGTGGAGGGAACCA
GCCCCCAATCAAGCCCAGGCGGACACCAATCCGACCCCAAGAGCGTCGGC
ACCAGGATCTCCCCTCTCAGCGGGCGCAGAATACCGAGGCGATACCTTCA
ACAGCAGCCTCGGGCTGAAGGAATCGTGGTCCCTCCAGGCCGTT back to top
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