mRNA_C-linearis_contig104.904.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: D7FIK0_ECTSI (WD repeat membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK0_ECTSI) HSP 1 Score: 2011 bits (5210), Expect = 0.000e+0 Identity = 1098/1308 (83.94%), Postives = 1157/1308 (88.46%), Query Frame = 2 Query: 896 TRLSFNKPLRLVQRASRQALETNVVNMRTYKEITEEQIPTPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSADKPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDREHGEATAIGLTEAFLVYATKAGTVEFFCLSEWAPLAGIELKHSSPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYEQANAAEPH----GSSNPEEKAADAVAAVNEKGGGATTR------------------SCTGADPVTGQLVRSGELVKSTPAEVTEYLKHYNELDDGEEN-DRDGATAAGGAGDAAADNFAGRGRGSGRGAVNEAFG-GGGGGLNDARDSKNSEGRAKDSAPVASTGAGPYRHVHNGMPAAG 4747 T +S++ LR A +++ VVNMRTYKE++EEQ+PT EDGGICGLAWCPDGQILTVA A+GDVFNFL RMP VHAS G CVAYLSSLRQVSVVD AR +KPLNVPV IEPTIVGLGPAHVAVAMNDR IFYRATRKDKSQ VDEREYNGRV DV+LNSTCAAVLSGSKVILQRIELDG+GG DGP GR GRS ++A G + G G AG+ P R+TFPER DREHGEAT +GLTEAFL+YATKAGTVEFFCLSEWAPLAGIELKH+SPVLRLWPNYLGTRVVFVD AGWLYSP+SDKLTQIEGFPPNCRHC+WDQVDRDVLM+SDG++LHTYVHSHTTIRGSMVTKLGLVEISEDGGVA+SP+STPLPPQHAPVVS+KGT+TCQT TG+IASFVAAPYE+ANAGSR PSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLE+IAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWD ALKL HTLAPHK PELCVEYGQQLEFRGSNDDALAM+ESALS++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E RRAVCLAG+ARCTLRSGDLRKGLRLAR S QLFRECAGILE MKQP EAA MYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQP+LLGQYAKACEITGRW QALEAYERARDMDSVVRLCLDQLD++ RAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHA+MD FTKVLG DVSPDDALSVARFYE +HELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQG HVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQE+RGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPIS+ EVPITQLECPSTKDALPMCV+TGQHMVKEDWC+CPRSRMPAL+SHYES+L YEQAN ++PH + EEK DA A N++ GGA R TG DPVTGQLVRSGELVK++PAEV +YLK YNELDDGEE + DGA G AA + AG G GRGAVNEAFG GG DARD KN EGRAKDSAPVAS G G YR HN +PAAG Sbjct: 295 TDVSYSPELRQAVAAGPTSIK--VVNMRTYKEVSEEQVPTSKEDGGICGLAWCPDGQILTVATATGDVFNFLARMPIVHASCGPCVAYLSSLRQVSVVDVARPGEKPLNVPVGIEPTIVGLGPAHVAVAMNDRVIFYRATRKDKSQ--VDEREYNGRVTDVQLNSTCAAVLSGSKVILQRIELDGKGGADGPGGRHGRSPAIAVGGGASTGSGGREGAGMMASPSARKTFPERADREHGEATVVGLTEAFLIYATKAGTVEFFCLSEWAPLAGIELKHASPVLRLWPNYLGTRVVFVDAVGAGWLYSPSSDKLTQIEGFPPNCRHCMWDQVDRDVLMISDGRELHTYVHSHTTIRGSMVTKLGLVEISEDGGVAMSPDSTPLPPQHAPVVSHKGTITCQTHTGNIASFVAAPYEFANAGSRAPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLERIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDQALKLAHTLAPHKEPELCVEYGQQLEFRGSNDDALAMYESALSST-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDETRRAVCLAGVARCTLRSGDLRKGLRLARGAGSSQLFRECAGILESMKQPAEAAAMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPKLLGQYAKACEITGRWEQALEAYERARDMDSVVRLCLDQLDQSHRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHARMDIFTKVLGTDVSPDDALSVARFYEGKHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISAAEVPITQLECPSTKDALPMCVITGQHMVKEDWCLCPRSRMPALLSHYESHLQYEQANNSKPHERRGNGEDREEKQTDAAA--NDEAGGAHGRVEPTAPRGAAAGGGGEYLGYTGTDPVTGQLVRSGELVKASPAEVADYLKRYNELDDGEEGKENDGAPGGRDTG-AAXXSSAG---GGGRGAVNEAFGVDDGGRAADARDHKNGEGRAKDSAPVASAGGGAYRGNHN-VPAAG 1584
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A6H5KE11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE11_9PHAE) HSP 1 Score: 1170 bits (3026), Expect = 0.000e+0 Identity = 706/978 (72.19%), Postives = 737/978 (75.36%), Query Frame = 2 Query: 2285 MEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQ---------------------------------------DLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREV--------------------RSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWG-------------------------------------------------------------------------QALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYEQANAAEPH----GSSNPEEKAADAVAAVNEKGGGATTR-------------------SCTGADPVTGQLVRSGELVKSTPAEVTEYLKHYNELDDGEEN-DRDGATAAGGAGDAAADNFAGRGRGSGRGAVNEAFG-GGGGGLNDARDSKNSEGRAKDSAPVASTGAGPYRHVHNGMPAAG 4747 MEVLDVQMAVHVYRQLGDAGMVMGLE+IAYVEDKNLLAGHVALLFGNYQTAQ + L + ALEMRWDLRHWD ALKL HTLAPHKVPELCVEYGQQLEFRGSNDDALAM+ESALS++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E RRAVCLAG+ARCTLRSGDLRKGLRLA+ RS QLFRECAGILE MKQP EAA MYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQP+LLGQYAKACEITGR G QALEAYERARDMDSVVRLCLDQLD++ RAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAF+LAKSHA+MD FTKVLG DVSPDDALSVARFYE +HELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQG HVPQ+LRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQE+RGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPIS+ EVPITQLECPSTKDALPMCV+TGQHMVKEDWC+CPRSRMPAL+SHYES+L YEQAN ++PH + EEK DA A N++ GGA TG DPVTGQLVRSGELVK++PAEV +YLK YNELDDG E + DGA G D A G G GRGAVNEAFG GG DARD KN EGRAKDSAPVAS G G YR HN +PAAG Sbjct: 1 MEVLDVQMAVHVYRQLGDAGMVMGLERIAYVEDKNLLAGHVALLFGNYQTAQARRNLLPLKPIGEVTGKPEEEKMNTRRRCLSVSCRDPYVSVLLKRHSLLPALEMRWDLRHWDQALKLAHTLAPHKVPELCVEYGQQLEFRGSNDDALAMYESALSST-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDETRRAVCLAGVARCTLRSGDLRKGLRLAKGAGYPNVMHDVCGIANNSFPTSRSSQLFRECAGILESMKQPAEAAAMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPKLLGQYAKACEITGRCGGCRKRSSGQARRSVASPLATGTMFCEGESTSEDMKSDVSLSKPPTSASQKGRERLAINLAPCFDPGLVNIRLEQALEAYERARDMDSVVRLCLDQLDQSHRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFNLAKSHARMDIFTKVLGTDVSPDDALSVARFYEGKHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGIHVPQALRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEYRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISAAEVPITQLECPSTKDALPMCVITGQHMVKEDWCLCPRSRMPALLSHYESHLQYEQANNSKPHERRGSGEDREEKQTDAAA--NDEAGGANGPVEPTAPRGAXXXXXXXEYLGYTGTDPVTGQLVRSGELVKASPAEVADYLKRYNELDDGGEGQENDGAP---GGRDTGAXXXXSAG-GGGRGAVNEAFGVDDGGRAADARDHKNGEGRAKDSAPVASAGGGAYRGNHN-VPAAG 964
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: F0YFC0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFC0_AURAN) HSP 1 Score: 1097 bits (2838), Expect = 0.000e+0 Identity = 601/1189 (50.55%), Postives = 763/1189 (64.17%), Query Frame = 2 Query: 965 VVNMRTYKEITEEQIPTPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVV---------------DAARSADKPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDREHGEATAIGLTEAFLVYATKAGTVEFFCL--SEWAPLAGIELKHSSPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYEQANAAEPHGSSNPEEKAADAVAAVNEKGGGATTRSCTGADPVTGQLVRSGELVKSTPAEVTEYLKHY 4480 +V M +K++ E I DG I + W PDG ILT A G V FL RMP VH + G+ VAYLSSLR+++V+ +P+ PV +EP+ V +GP HVAV MN+ ++Y D + +V+E+EY G+V + LN AAVLSG++V L IE AG G R+TFP RED ATAI LT FL+Y T+AGTVEFF + EW L G+EL+H+ V L PN GTRVV VD G++Y+P S +LT I FPP+ + +WD DR+VL+V+DGK+LHTYV++HTTI+G M KLG +TP+ P+ S +GT+TCQ TG I S YE+ AG+ P + F +NLALLRLK AW AAL L R YWLALS KAME++D+ +A+ VYRQLGDAGMVMGLE+IA++EDKNLLAGHV LLF NY AQDLFLSSS+P ALEMR DL HWD ALKL HTL P +VP + V Y QQLEF+G + AL MFE+AL + R VCLAG+ARCTLR GDLR+G++ +E L R+CA ILEGM Q +EAA+++EL +AAAIY+ + +AA +M +V P+L QYAKACE G+ G A++AYE A DMDSVVRL L L++ +RAF IVR+ SS GA++V+R CQ GD+ GAIEFLLMAKR+ +AF+L+K H+QMD +T VLG ++PDDALSVA+ YE HELG AG+FY+LCGQ+ RALKLF+QCG++EV AI +VGKAR+D LTHTLIDFLMGE DGVPKDPNYIYRLY+ALG++ QAAKTA+IIA+QEQDLG+YK AH IL+ET QLE Q HVPQ+LR+ F+LLHSY+LVKK+++ GDH+ AARMLLRVA+SIS+FP+H P+LTSTVIECQR+GL+ SA EYA+ LMR E RG+ID K++R IE ++RRPN +EEPE S CPIS V +P T+LECP+TK+ +PMCVVTG+HM K+DWC+CP S+MPAL S Y Y+ E KAA A NE G DPVT Q + +L EV ++L+++ Sbjct: 307 LVEMTHFKDLKRESIGLDATDGSIEKIEWSPDGHILTAATEGGGVHAFLARMPIVHNAHGTTVAYLSSLREITVIAXXXXXXXXXXXXXXXXXXDQPRPVVFPVGLEPSFVAVGPTHVAVGMNNVVMYYAYV--DPKRPKVNEQEYLGKVDKICLNGAHAAVLSGTRVTLHEIEAQ------------------AGAGTQ------------------RKTFPVREDEHFVCATAIALTRDFLIYGTQAGTVEFFAVHPDEWTMLPGVELRHAHAVASLHPNAAGTRVVVVDAQHQGFIYNPVSAELTSIPSFPPSVQCVMWDARDRNVLLVADGKELHTYVYAHTTIKGPMAAKLG--------------PATPVQQGLYPICSREGTITCQVATGSITSITCPQYEHKEAGA--PHQL---VFCQNLALLRLKDAWNAALALKNRAYWLALSGKAMEIMDIDLAIRVYRQLGDAGMVMGLERIAHLEDKNLLAGHVLLLFSNYNAAQDLFLSSSKPSCALEMRRDLLHWDQALKLAHTLDPSQVPYISVAYAQQLEFKGEYETALRMFEAALR--------------ACDDRGDVGESKDGFGDGPPPTAAPGGALPASSASTRPVCLAGVARCTLRMGDLRRGIQYVKESSDKGLCRDCAAILEGMNQHSEAASLFELAEHFEKAAAIYIRKLNFTQAAAIMHKVALPKLHAQYAKACEAAGKLGDAVKAYEVAHDMDSVVRLYLGNLNQPERAFEIVRKTESSDGAQLVARFCQQQGDFRGAIEFLLMAKRSDEAFNLSKLHSQMDVYTAVLGDAIAPDDALSVAQHYEAVHELGLAGQFYALCGQYPRALKLFIQCGEKEVHRAIEIVGKARSDSLTHTLIDFLMGEPDGVPKDPNYIYRLYLALGNFPQAAKTAVIIARQEQDLGSYKAAHAILYETTIQLEAQEVHVPQNLRKPFILLHSYLLVKKLIKAGDHDAAARMLLRVAKSISKFPSHGAPILTSTVIECQRAGLKASAHEYATQLMRPELRGKIDPKFKRKIEQMIRRPNLEEEPELLSPCPISGVMIPRTELECPTTKEEIPMCVVTGRHMEKDDWCVCPNSKMPALHSEYAKYIKAEM--------------KAARDQAMKNEAKGAPEKGQLDVLDPVTSQPISLDKLTLLKKDEVEKFLENW 1410
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A835ZAW6_9STRA (WD repeat membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW6_9STRA) HSP 1 Score: 1089 bits (2816), Expect = 0.000e+0 Identity = 634/1255 (50.52%), Postives = 783/1255 (62.39%), Query Frame = 2 Query: 965 VVNMRTYKEITEEQIPTPTEDGG-ICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSAD--------KPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQAR-VDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDREHGEATAIGLTEAFLVYATKAGTVEFFCLSEW-APLAGIELKHSSPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANA---------------GSRTPSDVWE--RCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSP-------------------------------------QLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKD-------------VSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEE-PEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYEQANAAEPHGSSNPEEKAADAVAAVNEKGGGATTRSCTGADPVTGQLVRSGELVKSTPAEVTEYLKHYNELD 4492 +++M T++E+ E + DG IC +AW PDGQILTVA +G VFN+L RMPTVHA+ G+ VAYLSSLR+V+VVD A A +PL V +S+EP+ V LG +HVA MN+RA F+R R V E+EY GRV + LN AA L G++V+L IE D PA +S+++ G RRTFPER D GEATA+ LT + L++AT+ G VEFF L + A L G L+H+ V R+WPN LGTRV+ D A AG +Y PA+ + T + FPP+ +H +WDQ DRD +VSDG LH Y +RG+ KLG + DG + ++PE PLPP HAPV S G VTCQ G + + AAP+ AN +D E LALLRL+ AW AA +L +R++ LAL+N+AMEVL+V+ A VYR+LGDAGMV GLE+ A ED+ LLAG VA LFG+Y AQ+L L S+RP+ AL+MR DL HW+ ALKL L P VPE+ Y QQLEFRG +D AL MF+ AL+ G XXXXXXXXXXXXX RA C AG+ARCTLR GD+R+G+ LAR +L RECA ILE M+QP EAA ++E G RA AIY+AA+++ +AA+V P+VT P+LLGQYA+ACE G+W A A+ERARDMD+VVRLCLDQLD+ +RAFAIVR AS+ GAE VSR+C AGDW GAIEFLLMA+R +AF LA++H QM F + + P DAL VAR+YE Q ELG AG+ Y+ CGQHHRALKL LQ G+ EV AAI VVG+ARNDMLTHTLID+LMGETDGVPKDPN+IYRLY+ALG+Y QAAKTAIIIA+QEQDLGNY+ AH +L+E IR+LEDQ VPQ+LRR F+LLHSY L K++ RRG+HEGAARMLLRVARS SRFP H V VLTS VIECQR+GLR SAFEYAS LMR EHRGQIDKKYRR+IEAIVRRP+R+ E PE + CPI+ + T LEC +T+DALPMC VTG+HM + DWC+CP SR+PAL+S Y L +E + GG A G DPV GQ V S + + T EV E ++ YN D Sbjct: 325 ILDMATFRELRGEAVAVDQSDGARICSVAWSPDGQILTVATRAGAVFNYLARMPTVHAACGARVAYLSSLREVTVVDVAACATDKTVTASARPLVVTLSMEPSFVALGASHVAAGMNNRAAFHRCGGGGGGDGRAVCEQEYPGRVDALCLNDKYAAALCGAQVVLHVIEPD-------PADT--ATSNISKNGXXX----------XXXXXXXRRTFPERGDGARGEATAVALTASLLIFATRDGAVEFFYLPDGGALLGGAALRHAHAVRRIWPNALGTRVLLADAAGAGTIYCPATGETTAVPAFPPSAQHAMWDQADRDAFLVSDGAALHCYAAPPRGLRGAAAVKLGPARVDGDGALLIAPEPWPLPPGHAPVASVAGVVTCQLADGTLTAATAAPFVAANTLVGXXXXXXXXXXXXXXXXAADAAELRAALCGALALLRLQDAWAAAARLGDRQHLLALANRAMEVLEVEAAARVYRRLGDAGMVRGLERAAAAEDRRLLAGEVAALFGDYGLAQELMLGSARPLAALDMRRDLLHWEQALKLATALRPGAVPEISAAYAQQLEFRGESDTALRMFQQALAGLGDGAAAAXXXXXXXXXXXXXQL--------------------------RATCAAGVARCTLRLGDVRRGVALARAAADSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGVRLLRECAAILEDMRQPAEAAALWEASGHFERALAIYLAARNMPQAASVAPKVTLPKLLGQYARACEAAGQWDAAAAAHERARDMDAVVRLCLDQLDQPERAFAIVRATASAAGAETVSRYCAAAGDWGGAIEFLLMAQRADEAFELARAHGQMAAFVGARARGXXXXXXXXXXXGALPPADALRVARYYEAQGELGAAGRHYAACGQHHRALKLLLQRGEAEVAAAIDVVGRARNDMLTHTLIDYLMGETDGVPKDPNHIYRLYLALGNYQQAAKTAIIIARQEQDLGNYREAHAVLYEAIRRLEDQRARVPQALRRPFLLLHSYTLAKRLARRGEHEGAARMLLRVARSASRFPAHTVAVLTSCVIECQRAGLRESAFEYASVLMRPEHRGQIDKKYRRSIEAIVRRPSREPEAPEVCTPCPITGAPLAATALECAATRDALPMCAVTGRHMERGDWCVCPVSRLPALLSEYARALRWE-----------------------AEQGGGAAAGPPWVGTDPVLGQPVSSADFRRCTAEEVDEQIRAYNAAD 1511
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A7S4A1K5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1K5_9STRA) HSP 1 Score: 1006 bits (2601), Expect = 0.000e+0 Identity = 543/1114 (48.74%), Postives = 722/1114 (64.81%), Query Frame = 2 Query: 965 VVNMRTYKEITEEQIPTPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSAD-KPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPERE--DREHGEATAIGLTEAFLVYATKAGTVEFFCLSEWAPLAGIELKHSSPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQH-APVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRP-NRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYEQANA 4291 +V++ T+K++ +E + DG I + W PDG +L + G V +L RMP VH + G VAYLSSLR++++V + D + + +PV +EP+ + +GP HV V MN+ A+FY + K++ V + EYNGRV + ++ + AVLSG +V L I+ G R RRTFP+R+ D + TA+ LT+ LVY TK+G V FF ++ PL G+EL+H +L++ PN GTR + VD + ++Y+P + LT I FP + IW+ +DR V +VS +LHTY ++ T+RG++V KLG V++SE GGV + P+++PL PQ PV S+ GT+TCQT G + YE+ + TP E F +NLALLRLK AW AA+ +++R YWLALS KAM+VLDV MA+ VYRQLGDAGMV+GLE+I ED NLLAGH+ LLF +Y AQDLFL+S++P+ AL+MR DL HW+ ALKL H+L P +VP + Y QQLEF+G D AL FESA + R CL G+ARCTL GDLRKG+ RE L+R+CA ILE M Q +EAA +YE +AAAIY+ D + A+VMP+VT P+L QYAKACE + R+ +A++AYE A D+DSVVRL L+QL+ +R F IVR SS GA +V++ CQD GD++GAIEFLLMAK T +AF LAK H Q++ +T+VLG + DDAL+VA+ YE+ +E G AGK+Y+LC + RALKLF++CG++EV AAI +VGKARND LTHTLIDFLMGE DGVPKDPNYIYRLY+ALG+Y QAAKTA+IIAKQEQ+LGNY AH IL ETI +L +Q HVPQ+LR FVLLHSY+L K+ RRG+ + AARMLLRVA+SIS+FP H+VP+LTS V+ C ++GL+ SA EYA LM+ E+R +ID K++R IEAI+R+ + DE EPTSKCP+SS ++PIT L + LPMCVVTG+H+ KED+C+CP SRMPAL SHY Y+ E A A Sbjct: 326 LVDLSTFKDLKKETVSDL--DGSIAKVEWSPDGHVLCASTKRGQVATYLARMPLVHGACGDTVAYLSSLREITLVKSGTPEDDQNVIIPVGLEPSYLAVGPKHVGVGMNNAALFYDISTKEE----VHKEEYNGRVSQMSISESHCAVLSGGRVTLHAID--------------------------------GSR---------RRTFPDRDSGDDMGDKVTALALTKDVLVYGTKSGMVHFFAINPEGPLPGVELRHERAILKIVPNVKGTRFIVVDTSKNAYVYAPTTSDLTPIPSFPRDFTSVIWEVIDRHVFIVSSPSELHTYAYAPQTVRGAVVAKLGAVDVSETGGVTMRPKASPLHPQGLVPVCSHDGTITCQTSGGTLTKIQCPLYEHRDDDDATP----ELHFCQNLALLRLKDAWNAAIDINKRPYWLALSGKAMDVLDVNMAIRVYRQLGDAGMVLGLERIKPFEDTNLLAGHILLLFQDYDAAQDLFLASTQPLHALDMRRDLLHWEQALKLAHSLDPAQVPAISCSYAQQLEFKGEYDPALRAFESAKK----------------------------AIDRAYQRRVEEKEEDLEGDMMRKKCLCGVARCTLHLGDLRKGMTYLREADDKILYRDCAKILEDMNQHSEAAGLYEDAEHWEKAAAIYIKKLDFSRCASVMPKVTLPKLHAQYAKACEASERFQEAVQAYENAHDLDSVVRLHLNQLNTPERGFDIVRRTQSSDGARLVAKFCQDHGDFKGAIEFLLMAKGTEEAFELAKLHNQVEKYTEVLGDSIRADDALNVAQHYEKINEPGLAGKYYALCNDYGRALKLFIKCGEKEVHAAIDIVGKARNDALTHTLIDFLMGEPDGVPKDPNYIYRLYIALGNYPQAAKTAVIIAKQEQELGNYAQAHAILHETIVKLREQKVHVPQALRHPFVLLHSYVLAGKLARRGEQDLAARMLLRVAKSISKFPAHVVPILTSVVVACTKAGLKQSAHEYALQLMKPEYRSKIDAKFKRKIEAIIRKAQDLDEIAEPTSKCPVSSQQIPITSLXXXXXXEELPMCVVTGRHVEKEDFCVCPNSRMPALRSHYLQYIKTEGAAA 1360
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A7S2W386_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W386_9STRA) HSP 1 Score: 999 bits (2584), Expect = 0.000e+0 Identity = 571/1194 (47.82%), Postives = 747/1194 (62.56%), Query Frame = 2 Query: 977 RTYKEITEEQIPTPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSADKPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDRE--HGEATAIGLTEAFLVYATKAGTVEFFCLSE-WAPLAGIELKHSSPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFP-PNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRG----QIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYEQANAAEPHGSSNPEEKAADAVAAVNEKGGGATTRSCTGADPVTGQLVRSGELVKSTPAEVTEYLKHYNELD-DGEENDRDGATAA 4531 R + ++ E++ E G W PDGQILTVA ASG++ FL RM +A++ S VAYLSSLR+VS+V+ R+ P VPV++E + LG HVA F+R + D S V EY +V VR+N AAVL+G V L IE G+ RRTFP+ D G TA+ LT+ L+YAT +G VEFF L E WAPL+G + HSS + + PN GTR+V +D ++ +P + +++ + + +H +WD VD V+ V DG+++H+YV+S TT G M+TKLG V+I+ +G + + PE+ LP +P++ G +TCQ G++ S V +P G+ P F +NL+L +L+ AW AAL L+ R +W ALSNKAME++DV MA+ VYRQLGDAGMVM LEQI+ VEDKNLLAGH+ALL+ +Y AQ+LFL+SS+P+ ALEMR DL HWD ALKL TLAP VPE+ VEY +QLEFR D AL FESAL +A + VC+AGIARCTLR GDLR+G+ ++ L R+CA ILE MKQ +EAA +YE+G Q RAAAIY+ +K+L +A+ ++ +V+Q +LL +YAK CE G+ +A++AYER RDMDSVVRLCLDQL R +RAF IVR+ +SSTGA+ V+++C+ G++ GAIEFLLMAK +AF LAK+H M+ +T +L + PD+A +VA +YE QH+LGKAG FYSLCGQ+ RAL+LFLQCG+++V+ AI VVGKA+NDMLTHTLIDFLMGE+DGVPK+P +I RLY+ALG+Y QAA+TA+IIA+QEQD GNYK AH LF+TIR+L++ VPQSLRR F+LLHSY LVKK V RGDH AAR+LLRVAR+IS+FP VP+LT+TVIEC+R+GL+ SAFEYA LMR ++D K +R IE I+RR N DE E S CPIS +PITQLECP+T+DALPMCVVTG+HM+ +DWC CPRS MPAL S Y + E A N T ADPVT Q V + EL + E Y+ YN +D +G+ D GA AA Sbjct: 266 RGFDDVKPEELSLSGERCAKVG--WSPDGQILTVATASGNIHTFLARMKIANAAWQSQVAYLSSLREVSIVN-VRTHLAPCKVPVNVEAQFISLGGMHVAAGSKKEVHFHRYLQGDVSL--VYRGEYIAKVECVRMNDHYAAVLAGGSVCLHEIEPSAPAGQR-----------------------------------RRRTFPDASDGSAASGNVTAVALTDTLLIYATSSGNVEFFLLGEDWAPLSGATIHHSSGIKSIHPNASGTRLVIIDDHDEAFVANPVTAEMSSFKHQARTSAKHVMWDLVDPGVIQVWDGEEIHSYVYSPTTRWGPMITKLGPVDITPEGEIVMQPEARALPSGCSPILCCAGIMTCQDAAGNLQS-VTSPQYAMTRGANVPL----LKFTQNLSLHKLRAAWDAALDLNGRAFWYALSNKAMELMDVAMAIRVYRQLGDAGMVMALEQISGVEDKNLLAGHIALLYDDYNKAQELFLASSQPLAALEMRRDLLHWDQALKLAQTLAPQDVPEISVEYARQLEFRTEYDAALHRFESALQ----------------------------------------AMEPHRSDALQTVCMAGIARCTLRLGDLRRGMSYVKQSNDVALCRDCARILETMKQNSEAAELYEMGQQWDRAAAIYIGSKNLSQASAIIDKVSQTKLLTEYAKRCEKEGQLEEAVKAYERGRDMDSVVRLCLDQLKRPERAFDIVRKTSSSTGAQHVAQYCRAEGNYRGAIEFLLMAKCYDEAFDLAKAHDCMEVYTTILDDGIGPDEANAVAVYYEGQHDLGKAGHFYSLCGQYARALRLFLQCGEKQVDRAIDVVGKAQNDMLTHTLIDFLMGESDGVPKEPVHINRLYLALGNYEQAARTAVIIARQEQDAGNYKGAHSTLFKTIRELDEHKVRVPQSLRRPFILLHSYTLVKKHVNRGDHALAARLLLRVARNISKFPKAKVPILTTTVIECKRAGLKGSAFEYAKELMRXXXXXXXXXKVDPKIKRMIETIIRRRNTDEASEELSACPISKEPIPITQLECPTTRDALPMCVVTGKHMLIDDWCFCPRSNMPALYSEYVKLIEAESGTAESADSGPNG-----------------------TAADPVTSQEVSASELKLVSEDEALAYITAYNSMDPEGKPEDPAGAAAA 1351
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A7S1CDP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDP1_9STRA) HSP 1 Score: 973 bits (2516), Expect = 0.000e+0 Identity = 535/1108 (48.29%), Postives = 697/1108 (62.91%), Query Frame = 2 Query: 965 VVNMRTYKEITEEQIPTPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSADKPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDREHGEATAIGLTEAFLVYATKAGTVEFFCLSEWAPLAGIELKHS--SPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMP-RVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYE 4279 +++M +KEI + G I L W DGQILT SG V+NFL RMPT+H + + VAYLSSLR++SV+D A PL +P+SIEP+ V LG H AV MN+R +YR SQ V+EREY V +V+LN AAVL +V LQ IE+ G G + + FP+R+D T + +T FLVY T AGT+EFF + +W L+ E +H + + ++PN GTR++F+D A AG+LY+P + + I + +WD D V + SDG + +TY+HS TI G + +LG +EI +G + + P TP+P PV+ Y G VTCQ Q G + S A ++ G R D F + LALLRL AW A L + +WLALS KAME L+++MA+ VYR+LGDAGMVM LEQI VEDKNLLAGHVA+LF +Y AQ+LFL+S+RP TALEMR DL HWDHALKL TLAP +VPEL VEY +Q EF+G AL M++SA EA A C AG+AR TLR GD+R+GL++ E+ L R A ILE MKQ +AA +Y + +AAAI + +K+ A +M +VTQP+L QYAKA E+ + +A AYERARDMDSVVRL LD L + A IVR+ SS GA+MV++ ++AGD+ GAIEFLL+AKR+ DAF LAK+H +M+ + LGK + ++ L +ARF+E + + G+AG+F+++CGQ+H+ALKLFLQCG+ E++ AI VVGKAR+DMLTHTLIDFLMGETDGVPKDPNYI+RLYMALG+Y QA KTAIII++QEQ+LGNYKVAH ILFET + LE Q VPQ+L RS LLHSYILVKK+V++ +HE AARML+RVA+ IS+FP+HIVP+LTSTVIECQR+GL+ SAFEYAS LMR E+R QI+ K +R IE +VRRPN +E E CP S + + LECPS + +P CVVTG+HM EDW CP + PAL +YL ++ Sbjct: 325 IIDMAEWKEIKSDAAVVERRHGPIEKLGWTSDGQILTATTRSGTVYNFLARMPTIHDANEARVAYLSSLREISVLDTLGDA-APLTIPISIEPSFVALGSMHCAVGMNNRVWYYRCD--SSSQELVNEREYLSTVDEVQLNRDYAAVLCEGRVYLQAIEMQGHGERE------------------------------------TKVFPDRDDAP--TITCMAMTTDFLVYGTAAGTIEFFYIQDWTTLSASEHRHDGGTSIKAVFPNPAGTRIIFLDDAGAGYLYNPVNGLVLPIPKLQKSTSKIMWDNADWGVFLTSDGAEFNTYIHSPLTINGPQIVQLGSLEIQGNGDMIMEPRPTPVPHGSVPVLVYDGVVTCQQQNGSLGSLTLATHDKLGGG-RLSGDGVRAAFSQALALLRLNAAWELATSLKSKSFWLALSGKAMEQLNIEMAIRVYRELGDAGMVMALEQINDVEDKNLLAGHVAMLFADYDQAQELFLTSTRPRTALEMRRDLLHWDHALKLAETLAPEQVPELSVEYAKQQEFKGEYSQALGMYQSA--------------------------------------ERGIDPRGDRGEALLADCRAGVARMTLRLGDVRRGLQMCTEIGDKTLCRMGAAILESMKQFADAANLYIKADEYDKAAAILIHSKNWSAVAPLMESKVTQPKLHAQYAKAKEMEKDYAEAARAYERARDMDSVVRLLLDHLKQPGAASDIVRKTQSSDGAQMVAKFLRNAGDFRGAIEFLLLAKRSDDAFELAKAHDEMNIYADQLGKSGTDEEYLRIARFFESKSKWGRAGEFFAICGQYHKALKLFLQCGEAEMDRAIEVVGKARSDMLTHTLIDFLMGETDGVPKDPNYIFRLYMALGNYPQAGKTAIIISRQEQELGNYKVAHSILFETHKDLEAQNIRVPQALARSLRLLHSYILVKKLVKQNNHEAAARMLIRVAKHISKFPSHIVPILTSTVIECQRAGLKRSAFEYASMLMRPEYRTQIEPKLKRKIEQLVRRPNTEEAEEEQRPCPFCSTPLSASTLECPSCMNTVPYCVVTGRHMTIEDWSCCPNCKFPALYEPLGAYLAFD 1352
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A7S3JVG1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVG1_9STRA) HSP 1 Score: 943 bits (2438), Expect = 0.000e+0 Identity = 521/1107 (47.06%), Postives = 712/1107 (64.32%), Query Frame = 2 Query: 1043 LAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSADKPLNVPVSIE--PTIVGLGPAHVAVAMND-RAIFYRATRKDKSQARVDEREYN---GRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPERE--DREHGEATAIGLTEAFLVYATKAGTVEFFCL--SEWAPLAGIELKHS--SPVLRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFP-PNCR--------HCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAP-YEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPN---RDEEPEPT---SKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYLHYE 4279 L W PDGQIL+ G + FL ++P +HAS +AYLSSLR +S++ + + + + +S+E P+++ LG H+AV ++ Y +TR D Q +++ Y+ G + ++LNS AAV G KVIL I+ D A FP D EATA GL+E L+Y T+AGT+E F L + L+ EL+HS P+ + PN GTR++F+D +G +Y+ A+ + + I FP P+ + WD +D+ V V ++LHTYV++ T++G+ V+KLG VEIS +G V ++P++TPL P+ + +G++ CQ G + SF+ +P YE+ + + E F +NLALL+L AW AAL+L+ R YWLALSNKAME++ VQ+A+ VYRQLGDAGMV GLE++A+ EDKNLLAGHV LLFGNY AQ+LFLSSSRPV+ALEMR DL HWD ALKL +TL P ++P + VEY QQLEF+G AL MF++AL +++ C AGIARCTLR GDLR+G+ L +E RS +L RECA IL+ M Q EAA MYE G +AAAIY+ + AA +M +V P+L QYAKACE ++ QA AYE A DMDSVVRL L QL++ ++A IVR SS GA++V+R CQ GD+ GAIEFLLMA+R+ +AF L+K+H M+ +T VLG +SPDDAL+VA+ +E HE AGKFY++CGQ+ +ALKL++ CG+ ++ AI +VGKA +D LTH LIDFLMGE DG+PKDPNYIYRLY+ALG+++QAA+TA+IIA+QEQ+LGNYK AH +L+ET QL G VPQSLR++F+LLHSYILV K V+RGDH+ AAR+LLRVA++IS+FP+H+ P+LT+TV+ECQR+ LR +A+EYA LMR EHR +D ++RR IEA++RRP +D E +PT + CPIS + +P +LECP+T++ LPMC+VTG+HM K+DWCICP S+MPAL+S Y+ Y+ E Sbjct: 126 LQWSPDGQILSALTDDGCIHCFLAKLPLIHASCAHRLAYLSSLRDISILALSNNGESETELILSLETEPSLLALGQNHIAVGFQSINSVTYYSTR-DGRQQKLNAHSYSSYGGDLHAIQLNSKFAAVFVGQKVILHEID-------DASA--------------------------------QHFKFPPDSAGDPTRAEATAFGLSENLLIYGTRAGTIELFSLLADDMCLLSTAELRHSISGPIKTIAPNCSGTRLLFIDANGSGHIYNAATTETSPIPEFPSPSSKKKENVDIPRIFWDAIDKHVFYVCADRELHTYVYAPITVKGAAVSKLGPVEISTEGQVRLTPKATPLQAGLLPICACEGSIACQGSGGGL-SFIQSPVYEHKASPGQG-----ELAFSQNLALLKLNDAWNAALELNARAYWLALSNKAMELIQVQLAIRVYRQLGDAGMVTGLERVAHHEDKNLLAGHVLLLFGNYNAAQELFLSSSRPVSALEMRRDLLHWDQALKLANTLDPSQLPYISVEYAQQLEFKGEYSSALKMFQNALD--------------------AFTTSNLNDSKLDDEVPTTYICSDEMLASKKKACSAGIARCTLRLGDLRRGIALVKEARSERLSRECAAILQNMSQHVEAAAMYEAGEYFEKAAAIYIEQHNFTAAAAIMHKVNLPKLHLQYAKACESAEKFLQAAAAYESAGDMDSVVRLYLHQLEKPEKALEIVRRTHSSGGAQLVARFCQQEGDFRGAIEFLLMAQRSEEAFELSKAHGHMELYTSVLGDRMSPDDALNVAKHFESIHESALAGKFYAVCGQYAKALKLYMHCGESQLNNAIEIVGKAHSDSLTHKLIDFLMGEPDGIPKDPNYIYRLYIALGNFTQAARTAVIIARQEQELGNYKQAHAVLYETNIQLIAHGVRVPQSLRQAFILLHSYILVMKKVKRGDHQTAARLLLRVAKNISKFPSHVAPILTTTVVECQRAQLRVAAYEYALVLMRPEHRNNVDAQFRRKIEAMIRRPGSRPQDGETDPTEPQTPCPISGLPLPQFKLECPTTQEELPMCIVTGRHMEKDDWCICPNSKMPALLSEYKKYIQAE 1166
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A6G0XL25_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XL25_9STRA) HSP 1 Score: 895 bits (2312), Expect = 2.030e-297 Identity = 488/1109 (44.00%), Postives = 686/1109 (61.86%), Query Frame = 2 Query: 965 VVNMRTYKEITEEQIP-TPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSADKPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQGGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDREHGEATAIGLTEAFLVYATKAG--TVEFFCLSEWAPLAGIELKHSSPV--LRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSD--VWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYL 4270 VV+M TY EI + I T E+ +A+ DGQILTVA G + FL RMP +H FG+ VA+LSSLR+++VVD D P+++ VSIEP+ + +GP HVAV MN+R FYR + A V+E++Y GRV V+LN AAVLS KV+L IE Q + ++FP+R+DR GE +AI LT+ F +Y+T G T++FF L+EW L G +H + + + PN LGT+VVF+D G++ + + + I P + +WD + +V + + + T++++ TI G VT+LG +EI +G ++P+ST LP H+ V+ G +T Q +G + + V+ +E +R S+ V+++C L+LLR++ AW+ A+ LD R YWLAL+ +AM LD+ ++ VYRQLGDAGMVMGL +I +VEDKNLLAGHV++LFG Y+ AQ LFL+S+ P+ AL M+ L WD AL L +LA H VP+L Y QLEF+G + AL M+E A ++ EA + +AGIARCTLR GDLR+G+RL E+ L ++C ILE MKQ ++AA +Y +M ++T P++ QYAKA E G + A +AYE A D+D+VVR+ L+ L ++AF IV++ SS GA V+++C ++ ++ AI++LL+A R DAF LA++H ++D FTKV+G +S D AL +A YEQ +AG++Y +CG +H+AL+LFLQCG+ E+ AI VVGKARNDMLTHTLID+LMG+TDG+PKDPNYI+RLYMALG+Y+QAAKTAIIIA+QEQ+LGNYKVAH +L ET RQL+ HV Q LR S LLHSY++VKK+V+RGDH+ AA+ML+RVA+SIS+FPTH+ +L S VIECQR+GL+ S++++A+ LMR E+R IDK+ +R IEAIVRRPNR++ P+ ++CP EV +L+C K+ +P C VTG HMVK DW CP + PAL SH+ S+L Sbjct: 298 VVDMSTYTEIKSDSIKLTDAEENEANMMAYTGDGQILTVATQGGVIQTFLARMPNIHDHFGNYVAFLSSLREITVVDIL-GRDNPIHIQVSIEPSFIAIGPRHVAVGMNNRVWFYRCDGSSRD-ALVNEQQYLGRVTSVKLNRDFAAVLSDGKVLLHWIEPSQQHAAE-----------------------------------QSKSFPDRDDRG-GEISAIALTKDFFIYSTTNGHGTIQFFYLAEWKLLEGCCYRHEDGIGIVHISPNLLGTKVVFLDSRRRGYMLNSTNREALYIPSVPNSTNTILWDNSEANVFVAIEPSEFSTFLYTELTINGPEVTQLGYMEIDLNGDFILAPQSTKLPSGHSAVLFSDGVLTTQQPSGTLGTVVSCTHEGLQKSARPESEKVVFKQC----LSLLRMEAAWKQAIVLDAREYWLALAGRAMHTLDIALSKRVYRQLGDAGMVMGLNRIEHVEDKNLLAGHVSMLFGQYEQAQKLFLNSTDPMAALAMQRHLLQWDQALLLADSLAVHLVPDLSTSYATQLEFKGDYEGALKMYEHACNS-----------------------------------VDPQGNPVVATEATQMASMAGIARCTLRMGDLRRGIRLVNELNDATLSKDCGAILESMKQFSDAAQLYXXXXXXXXXXXXXXXXXXXXXXXPLMAKITMPKVHMQYAKAKEAAGDYAAASDAYEAANDLDNVVRIQLEHLSNPEKAFTIVKQTKSSEGASAVAKYCIESANYAAAIDYLLLANREDDAFQLAQTHNEIDAFTKVIGDAISGDRALKIALHYEQTQAHARAGEYYQVCGNYHKALRLFLQCGESELGRAIDVVGKARNDMLTHTLIDYLMGDTDGIPKDPNYIFRLYMALGNYAQAAKTAIIIARQEQELGNYKVAHDVLVETHRQLQLHKIHVSQDLRNSLTLLHSYVIVKKLVKRGDHKAAAKMLVRVAKSISKFPTHVSNILISAVIECQRAGLKGSSYDFATQLMRPEYRNNIDKEIKRKIEAIVRRPNREQVPDTATQCPFCDHEVVDVELDCSQCKNWIPYCAVTGYHMVKTDWSQCPHCQFPALYSHFTSHL 1329
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Match: A0A024TWD6_9STRA (Uncharacterized protein n=17 Tax=Aphanomyces TaxID=100860 RepID=A0A024TWD6_9STRA) HSP 1 Score: 891 bits (2303), Expect = 7.830e-296 Identity = 491/1112 (44.15%), Postives = 684/1112 (61.51%), Query Frame = 2 Query: 965 VVNMRTYKEITEEQIP-TPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPTVHASFGSCVAYLSSLRQVSVVDAARSADKPLNVPVSIEPTIVGLGPAHVAVAMNDRAIFYRATRKDKSQARVDEREYNGRVIDVRLNSTCAAVLSGSKVILQRIELDGQ---GGEDGPAGRGGRSSSVAGTGVSLAGGAGGGRAGIAPGPGPRRTFPEREDREHG--EATAIGLTEAFLVYATKAGT--VEFFCLSEWAPLAGIELKHSSPV--LRLWPNYLGTRVVFVDGASAGWLYSPASDKLTQIEGFPPNCRHCIWDQVDRDVLMVSDGKDLHTYVHSHTTIRGSMVTKLGLVEISEDGGVAVSPESTPLPPQHAPVVSYKGTVTCQTQTGDIASFVAAPYEYANAGSRTPSDVWERCFLENLALLRLKQAWRAALQLDERRYWLALSNKAMEVLDVQMAVHVYRQLGDAGMVMGLEQIAYVEDKNLLAGHVALLFGNYQTAQDLFLSSSRPVTALEMRWDLRHWDHALKLGHTLAPHKVPELCVEYGQQLEFRGSNDDALAMFESALSNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEARRAVCLAGIARCTLRSGDLRKGLRLAREVRSPQLFRECAGILEGMKQPTEAATMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPRLLGQYAKACEITGRWGQALEAYERARDMDSVVRLCLDQLDRADRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHAQMDTFTKVLGKDVSPDDALSVARFYEQQHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKVAHGILFETIRQLEDQGTHVPQSLRRSFVLLHSYILVKKMVRRGDHEGAARMLLRVARSISRFPTHIVPVLTSTVIECQRSGLRNSAFEYASTLMRQEHRGQIDKKYRRNIEAIVRRPNRDEEPEPTSKCPISSVEVPITQLECPSTKDALPMCVVTGQHMVKEDWCICPRSRMPALMSHYESYL 4270 VV+M Y EI + I T ED +A+ DGQILTVA G + FL RMP +H G+ VA+LSSLR+++VVD D P+++ VSIEP+ + +GP HVAV MN+R FYR ++ A V+E++Y GRV V+LN AAVLS KV+L IE Q GG + ++FPE RE E ++I LT+ F +YAT G V FF L EW L G +H + + + PN +GT+VVF+D ++ + + + + P + WD D V + + + T++++ TI G VT+LG ++I +G SP++T +P H+ V+ G +T Q G +++ ++ +E R SD + F + L LLR+ AW+ A+ +D + YWLAL+ +AM LD+ ++ VYRQLGDAGMVMGL +I +VEDKNLLAGHV++LFG Y AQ LFL+SS P+ AL M+ L WD AL L +LA H VPEL Y QLEF+G + AL M+E A + E + +AGIARCTLR+GDLR+G+RL E+ P L +EC ILEGMKQ ++AA +YE G +AA IY+ K L KAA +M +V P++ QYAKA E G + A +AYE A D+DSVVR+ L+ L+ A++AF+IV++ SS GA V+++C ++ ++ AI+FLL+A R DAF LA++H ++D FTK +G +S + AL +A+ YEQ +AG++Y +CG +H+AL+LFLQCG+ E+ AI VVGKARNDMLTHTLID+LMG+TDG+PKDPNYI+RLYMALG+Y+QAAKTAIIIA+QEQ+LGNYKVAH +L ET RQL+ HV Q LR S LLHSY++VKK+V+RGDH AA+ML+RVA+++S+FPTH+ +L S VIECQR+GL+ +++++A+ LMR E+R IDK+ +R IEAIVRRPN+++ P+ + CP +V +L+C K+ +P C VTG HMVK DW CP + PAL SH ++L Sbjct: 298 VVDMSNYSEIKADSIKLTDAEDNEANMMAYTGDGQILTVATQGGIIQTFLARMPNIHDHVGNYVAFLSSLREITVVDTL-GRDAPIHIQVSIEPSFIAIGPRHVAVGMNNRVWFYRCDGGNRD-ALVNEQQYLGRVTSVKLNRDYAAVLSDGKVVLHFIEPGAQQQYGGNHEQS----------------------------------KSFPETHGREDRGVEISSIALTKDFFIYATSGGVGGVHFFFLHEWKLLEGCSYRHEDGIGIVHIAPNAVGTKVVFIDSRRRAYILNATNREALYVPSVPNSASAIFWDTCDPTVFVAIEPTEFTTFLYTELTINGPEVTQLGTIDIDLNGDFQFSPQATKIPSGHSAVLFADGVLTTQQPGGTLSNVMSCTHEALQKSVRPESD--KAVFKQCLGLLRMDVAWKQAVAIDAKEYWLALAGRAMHTLDITLSKRVYRQLGDAGMVMGLNRIEHVEDKNLLAGHVSMLFGQYDQAQKLFLNSSDPMAALTMQRYLLQWDQALLLADSLAVHLVPELSASYAAQLEFKGDVEGALKMYEHACN-----------------------------------AVDPLGNPVVASEKTQMQSMAGIARCTLRTGDLRRGIRLVTELNDPSLCKECGLILEGMKQLSDAALLYERGEVYEKAAQIYIQMKQLHKAAPLMAKVHMPKVHVQYAKAKEAAGEFAAASDAYEAAMDLDSVVRIQLEHLNNAEKAFSIVKQTKSSEGASAVAKYCIESANYAAAIDFLLLANREDDAFQLAQAHNEIDAFTKTIGDTISVERALKIAQHYEQIQSHARAGEYYQVCGNYHKALRLFLQCGEAELGRAIDVVGKARNDMLTHTLIDYLMGDTDGIPKDPNYIFRLYMALGNYAQAAKTAIIIARQEQELGNYKVAHDVLVETHRQLQLHKIHVNQDLRNSLTLLHSYVVVKKLVKRGDHVAAAKMLVRVAKNMSKFPTHVSNILISAVIECQRAGLKGNSYDFATQLMRPEYRNGIDKEIKRKIEAIVRRPNKEQPPDTLTPCPFCDHDVVDVELDCTHCKNWIPYCAVTGYHMVKADWSQCPHCQFPALYSHLTTHL 1336 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.904.1 >prot_C-linearis_contig104.904.1 ID=prot_C-linearis_contig104.904.1|Name=mRNA_C-linearis_contig104.904.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1259bp MRTYKEITEEQIPTPTEDGGICGLAWCPDGQILTVAAASGDVFNFLTRMPback to top mRNA from alignment at C-linearis_contig104:413878..426031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.904.1 ID=mRNA_C-linearis_contig104.904.1|Name=mRNA_C-linearis_contig104.904.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12154bp|location=Sequence derived from alignment at C-linearis_contig104:413878..426031+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:413878..426031+ >mRNA_C-linearis_contig104.904.1 ID=mRNA_C-linearis_contig104.904.1|Name=mRNA_C-linearis_contig104.904.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7554bp|location=Sequence derived from alignment at C-linearis_contig104:413878..426031+ (Chordaria linearis ClinC8C monoicous)back to top |