mRNA_C-linearis_contig104.894.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: D8LEA9_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA9_ECTSI) HSP 1 Score: 708 bits (1828), Expect = 1.040e-249 Identity = 395/558 (70.79%), Postives = 437/558 (78.32%), Query Frame = 1 Query: 55 MMTASFGYDTSSSMSLLPP-DGAAAPSQDSAVDEKAKAQEPARFSEE-----------QQQEQRGVPGRQLMEDRWPGAEETPF--IPSG--SSGSPTLARPSRNDRDGMMDGDLR-RAQLGMGMGRAPRLGEQPPLDPFAMERPPVLSANGGGAAAQGRGTIGAGEIRAKPP-----ARKAWKMSTTKPTPSFSSTPVGAAAAVDPANNGKQRGAGVAAAG---------VGLTPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEALENRGSAANQERLLSQGFRVG 1635
MMTA+FG +++SSMSLLPP +G+ D+ D +E AR EE Q+ EQ+ VPGRQLMEDRWP + + +P G S GSP +A N +GD G G L EQPP DPFAMERPP+ + GG A G GEIRAKPP AR+ W ++TTKP+P SST VGA A + + +G GVA G VGL PPKWLPDE+T SCSGCG+DFDW RRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNAR APLQEMLA ES+SNAVKENDVE+GT+ASYLNRPI FTLGAEVRKAAYT+HNF+KEGMIQDQSIPQELLS AKGLAFLTVIKGGFIVAGRVGTGLV++KT+EGVWSAPSAIAT+GMGWGALIGG+ITDFVLVLNT+AALEAFSGRGQVSIGAELSVAVGP+GRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVR+LLSGSVAPPPAARPLYEAL+NRG A+Q+RLLSQGFRVG
Sbjct: 1 MMTAAFGDESASSMSLLPPIEGSGG---DTGEDVDGNPREAARLLEEENPHHQPSYNGQRHEQQDVPGRQLMEDRWPSGQYSSLTTVPPGGASGGSPNVAWQDPNTTTSAGEGDSDGMVTPGQGQAGLAPLDEQPPPDPFAMERPPIANGGRGGGGAVG------GEIRAKPPVAPRPARREWNLTTTKPSPKLSSTAVGATGAANGHISSDGKGVGVAGVGGGSVAGGGGVGLKPPKWLPDEDTSSCSGCGRDFDWARRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARVAPLQEMLA-ESVSNAVKENDVERGTVASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRDLLSGSVAPPPAARPLYEALDNRGPGADQQRLLSQGFRVG 548
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A835Z286_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z286_9STRA) HSP 1 Score: 357 bits (915), Expect = 2.120e-113 Identity = 192/355 (54.08%), Postives = 238/355 (67.04%), Query Frame = 1 Query: 661 LTPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDV---EQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVV-------------AKTEEG---------------------------------VWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEG-VAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEAL 1575
+TPP+W+PDE+ L+C C K FDW RR+HHCR CGGIFC +CS++++LLPRSFG+RDPQR+C+ CNA A LQE L A ++SNAVK N V E+ L+ YLN+P++FTLGAEVRKAAY+V NF + G++QD SIP ELL+ AKGLAF+TV+K G G GTGLV+ A +G WSAPSAI TVGMGWGA IG ++TD VLVL T AA+EAF VS+GA + VA GP+GR+GAG V+++ E VA SYSHSRGLFAG+SLEG VI +RPDVNR FYGR + ++LL+G PPPAA PLYEAL
Sbjct: 83 ITPPRWIPDEDVLACVKCNKAFDWARRKHHCRCCGGIFCASCSKYQSLLPRSFGTRDPQRVCKACNASLAHLQEHLQA-TLSNAVKANQVSKSEKPGLSPYLNKPLSFTLGAEVRKAAYSVLNFMRTGVVQDNSIPTELLARAKGLAFMTVLKAGCFWTGSFGTGLVISRLPAERCCHPSAASLSDGDSAAAPEQXXPLSVAAAAYGSSAQLMRRPPRRLEWSAPSAIGTVGMGWGAAIGANVTDVVLVLTTNAAVEAFCAT-NVSLGAGIGVAAGPIGRSGAGAVTISTESDVAPVLSYSHSRGLFAGISLEGAVIAARPDVNRAFYGRDIGAKQLLAGEAPPPPAAAPLYEAL 435
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A835YJX3_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX3_9STRA) HSP 1 Score: 350 bits (897), Expect = 1.830e-112 Identity = 180/313 (57.51%), Postives = 221/313 (70.61%), Query Frame = 1 Query: 649 AGVGLTPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGT---LASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEG-VAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEAL 1575
A GL PP+W PD ++C CG+ FDW RR+HH +ALLPRSFG+RDPQR+C C PLQ L + SNAV+ N+V G L+ YLN+P++FTLGAEVRKAAY+V NF + G++QD SIP ELL+ AKGLAF+TV+K G + G GTGLV WSAPSAI T+GMGWGA IG +ITD VLVLNT AA+EAF G GQ+S+GA + +A GP+GR+GAG V++ +G VA SYSHSRGLFAG+SLEG VI +RPDVNR FYG+ V+ ++LLSG V PPPAA PLYEAL
Sbjct: 2 AAAGLAPPRWTPDAQAVNCHNCGRLFDWARRKHHXXXXXXXXXXXXXXXQALLPRSFGTRDPQRVCDECKTTLEPLQADLI-NTFSNAVRANEVANGAKRGLSPYLNKPLSFTLGAEVRKAAYSVFNFMRAGVVQDSSIPTELLTCAKGLAFITVLKAGVVWVGNFGTGLVQCHLLSTEWSAPSAIGTIGMGWGACIGANITDVVLVLNTAAAVEAFCGAGQMSLGAGIGMAAGPIGRSGAGGVTIGTDGDVAPVLSYSHSRGLFAGISLEGAVIAARPDVNRAFYGKDVTAKQLLSGEVDPPPAAAPLYEAL 313
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A485KLR6_9STRA (Aste57867_8862 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLR6_9STRA) HSP 1 Score: 344 bits (882), Expect = 6.450e-109 Identity = 176/344 (51.16%), Postives = 233/344 (67.73%), Query Frame = 1 Query: 673 KWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEALE----------NRGSAANQERL-LSQGFRVG 1635
+W+PDE C CG FDW+RR+HHCR CG +FC C+ R+++ S + PQR+C+PC+ P Q +L E+ SNAV+ N + + +LN P +FTL EVRKAAY+V NF +G+I+DQSIP LL++A+G+AFLTV+K GF+V GR+GTGLV++K +G WSAPSAI T G+GWGA +GG++TDFV++LNT AA++ F +GQV++GAEL VA GPLGR AG++ G+A YSYSHS+GLF G+SLEG VIV+RPDVNR+FYGR ++ ELLSG PP AA PLY+ALE NR +A R LSQ +G
Sbjct: 35 RWIPDEEVSLCKSCGLLFDWVRRKHHCRYCGQVFCDLCTTHRSMIREDKILTAPTKRYLSVSAYSPQRVCEPCHNVLMPDQAILR-ETASNAVQPNSINEAGSKRFLNSPYSFTLREEVRKAAYSVKNFMLDGLIKDQSIPLPLLTNAQGIAFLTVLKVGFVVTGRLGTGLVLSKLADGSWSAPSAIGTAGIGWGAQVGGEVTDFVIILNTRAAVDTFCAQGQVNLGAELGVAAGPLGRVAAGSMEAGPGGIAPCYSYSHSKGLFIGISLEGSVIVARPDVNREFYGRDITAAELLSGQERPPVAAMPLYDALEAVALSPANALNRQAAVAAARYSLSQSMSLG 377
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A067CDH3_SAPPC (FYVE-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDH3_SAPPC) HSP 1 Score: 340 bits (873), Expect = 4.440e-108 Identity = 174/345 (50.43%), Postives = 233/345 (67.54%), Query Frame = 1 Query: 664 TPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALL--------PR----SFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEALE----------NRGSAANQERLLSQGFRV 1632
T +W+PD C CG FDW+RR+HHCR CG +FC C+ FR+L+ P S + +PQR+C+PC P Q +L A + SNAV+ N + + +LN P +FTL E+RKAAY+V NF +G+I+DQSIP LL++AKG+AFLTV+K GF+V GRVGTGLV+AK +G WSAPSAIAT G+GWGA IGG +TDFV++LNT +A++ F +GQV++GAEL VA GPLGR AG + G+A YSYSHS+GLF G+S+EG V+++RPDVN +FYG++V+ +LLSG PP AA+PLY+AL NRGS + + S R+
Sbjct: 20 TTIRWIPDAEVSLCKACGLLFDWVRRKHHCRYCGHVFCDLCTTFRSLIRDDKILTSPEKRYLSVNAYNPQRVCEPCYTLLLPDQSLLCATA-SNAVQPNSISEAGSKRFLNSPYSFTLREEIRKAAYSVKNFMYDGVIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGSWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGPGGIAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKEVTAADLLSGRERPPVAAQPLYDALTMAVESPANGLNRGSLSTRAASYSSSQRL 363
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A5D6Y5S5_9STRA (FYVE-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S5_9STRA) HSP 1 Score: 339 bits (870), Expect = 8.140e-108 Identity = 172/317 (54.26%), Postives = 222/317 (70.03%), Query Frame = 1 Query: 664 TPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAE-GVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEAL 1575
T +W+PD C GC FDW+RR+HHCR CG +FC C+ R+L+P S + +PQR+C C P Q L +MSNAV+EN++++ +LN P +FTL E+RKAAY+V NF +G+I+DQSIP LL+HAKG+AFLTVIK GF+ GRVGTGLV+A+ +G WSAPSAIAT G+GWGA IGG+ITDFV+VLNT+ A++AF +GQV++GAEL V+ GP+GR AG V +A+ VA YSYSHS+GLF GLSLEG +I++RPD+NR FYGR V V ELL G PP A PLY+A+
Sbjct: 13 TTVRWIPDAEVSLCFGCQLLFDWVRRKHHCRFCGHVFCDLCTPRRSLIPADQILANPERQYLSVNAHNPQRVCDDCFNALLPAQAELRG-TMSNAVQENELDEAGAKRFLNSPYSFTLREEIRKAAYSVKNFMYQGVIKDQSIPLPLLTHAKGIAFLTVIKVGFVFTGRVGTGLVIARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIVLNTKRAVDAFCSKGQVNLGAELGVSAGPVGRVAAGAVEASADLAVAPCYSYSHSKGLFVGLSLEGSMILARPDINRAFYGRDVQVAELLGGMEPPPVGATPLYDAI 328
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A1V9Z795_9STRA (FYVE-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z795_9STRA) HSP 1 Score: 339 bits (870), Expect = 1.330e-107 Identity = 165/313 (52.72%), Postives = 221/313 (70.61%), Query Frame = 1 Query: 673 KWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEAL 1575
+W+PD C CG FDW+RR+HHCR CG +FC C+ FR+L+ S + +PQR+C+PC P Q +L E+ SNAV+ N + + +LN P +FTL E+RKAAY+V NF +G+I+DQSIP LL++AKG+AFLTV+K GF+V GRVGTGLV+AK +G WSAPSAIAT G+GWGA IGG +TDFV++LNT +A++ F +GQV++GAEL VA GPLGR AG + G+A YSYSHS+GLF G+S+EG ++V+RPDVN +FYG++V+ +LLSG P AA+PLY+AL
Sbjct: 21 RWIPDAEVSLCKACGLLFDWVRRKHHCRYCGHVFCDLCTNFRSLIREDKILTSPEKRYLSVNAYNPQRVCEPCYTILLPDQSLLC-ETSSNAVQPNSITEAGSKRFLNSPYSFTLREEIRKAAYSVKNFMYDGLIKDQSIPLPLLTNAKGIAFLTVLKVGFVVTGRVGTGLVIAKLPDGTWSAPSAIATAGIGWGAQIGGGVTDFVIILNTRSAVDTFCAQGQVNMGAELGVAAGPLGRVAAGAMEAGPGGIAPCYSYSHSKGLFIGISIEGSIVVARPDVNMEFYGKEVTAAQLLSGQERRPVAAQPLYDAL 332
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A6V1LWE2_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LWE2_HETAK) HSP 1 Score: 340 bits (871), Expect = 1.200e-106 Identity = 177/338 (52.37%), Postives = 239/338 (70.71%), Query Frame = 1 Query: 652 GVGLTPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPRSFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGT-LASYLNRPIAFTLGAEVRKAAYTVHNFTKE---------GMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAEGVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEALENRGSAANQERLLSQGFRVG 1635
GVG P +W+PDE C+ C FDW R+HHCR CG IFC +CS+ +ALLP+ F RDP+R+C PC PLQ+ L A +MSN+++EN ++ + L +++ P + TLGA VRKAA+T+ N T G+++DQSIP E L A+GLAFLTV K GF++AG+ GTGLVVA+ +G W+APSAIATVG+ WG LIGG+ITD+V++LNT+ A+EAFSGRGQV++GAEL A+GP+GR GN+++ GVA Y+YSHS+GLF G+SLEG VI +R D+N+KFYG+ V LL+G V P AA+PLY+ALE +A +++ RVG
Sbjct: 120 GVGALP-RWVPDEEVTHCTQCQVMFDWAVRKHHCRACGRIFCQSCSENKALLPKEFCDRDPKRVCDPCFRALQPLQDELVA-TMSNSIRENHIDPNSALERHVHNPFSTTLGACVRKAAHTILNMTDTHTTDHINGMGVVKDQSIPIEYLRRARGLAFLTVAKMGFVLAGKAGTGLVVARRPDGGWTAPSAIATVGVNWGLLIGGEITDYVILLNTQKAVEAFSGRGQVTLGAELGAALGPVGRNAGGNLALGDGGVAPTYTYSHSKGLFVGVSLEGTVIAARADMNQKFYGQPVLASNLLNGVVPNPRAAQPLYDALETACAAQAPRNAITE--RVG 453
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: A0A833RX76_PHYIN (Las17-binding protein actin regulator n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RX76_PHYIN) HSP 1 Score: 333 bits (854), Expect = 3.950e-105 Identity = 171/330 (51.82%), Postives = 228/330 (69.09%), Query Frame = 1 Query: 664 TPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAE-GVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEAL----ENRGSAANQ 1602
T +W+PD C GC FDW+RR+HHCR CG +FC C+ R+L+ + + +PQR+C C+AR P QE L +MS+AV++ +V++ + N P +FTL E+RKA Y+V NFT +G+++DQSIP LL+HAKG+AFLTVIK GF+ GR+GTGLVVAK +G WSAPSAI T G+GWG IGG+ITDFV++LNT+ A+EAF GQV++GAEL ++ GP+GR AG + +A VA YSYSHS+GL+AG+SLEG VI+SRPD+NR FYG+ V+V ELL G PP AA PLYEA+ E+ + AN+
Sbjct: 16 TTVRWIPDAEVSVCYGCQLLFDWVRRKHHCRYCGHVFCELCTPQRSLIREDQILTNPERKYLAVNAHNPQRVCDDCHARLEPEQEELR-RTMSHAVQQMEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHAKGIAFLTVIKMGFVFTGRMGTGLVVAKLPDGRWSAPSAIGTAGLGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVAAGALEASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYGKTVTVPELLGGVEPPPVAAAPLYEAIRTAMESPANGANR 344
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Match: K3X8G2_GLOUD (FYVE-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8G2_GLOUD) HSP 1 Score: 331 bits (849), Expect = 6.800e-105 Identity = 168/317 (53.00%), Postives = 220/317 (69.40%), Query Frame = 1 Query: 664 TPPKWLPDENTLSCSGCGKDFDWIRRRHHCRLCGGIFCYACSQFRALLPR------------SFGSRDPQRLCQPCNARAAPLQEMLAAESMSNAVKENDVEQGTLASYLNRPIAFTLGAEVRKAAYTVHNFTKEGMIQDQSIPQELLSHAKGLAFLTVIKGGFIVAGRVGTGLVVAKTEEGVWSAPSAIATVGMGWGALIGGDITDFVLVLNTEAALEAFSGRGQVSIGAELSVAVGPLGRTGAGNVSVAAE-GVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQVSVRELLSGSVAPPPAARPLYEAL 1575
T +W+PD C GC FDW+RR+HHCR CG +FC C+ R+L+ S +PQR+C C P+Q L E+MSNAV+ N++++ +LN P +FTL E+RKAAY+V NF +G+I+DQSIP L++ A+G+AFLTVIK GF+ GRVGTGLVVA+ +G WSAPSAIAT G+GWGA IGG+ITDFV++LNT+ A++AF +GQV++GAEL V GP+GR +G + +++ VA YSYSHS+GLF G+SLEG +I+SRPDVNR FYGR V V ELL G PP AA PLYEA+
Sbjct: 27 TTVRWIPDAEVSLCFGCKLLFDWVRRKHHCRYCGYVFCDLCTTHRSLIREDQILSNPERQYLSVNGHNPQRVCDECYNALLPVQAELR-ETMSNAVQHNNIDEAGPKRFLNSPYSFTLREEIRKAAYSVKNFMYQGVIKDQSIPLPLITQAQGIAFLTVIKVGFVFTGRVGTGLVVARLPDGRWSAPSAIATAGVGWGAQIGGEITDFVIILNTKRAVDAFCSKGQVNLGAELGVCAGPVGRVASGGMEASSDLAVAPCYSYSHSKGLFVGISLEGSMILSRPDVNRAFYGRDVQVTELLRGMEPPPVAASPLYEAI 342 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.894.1 >prot_C-linearis_contig104.894.1 ID=prot_C-linearis_contig104.894.1|Name=mRNA_C-linearis_contig104.894.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=528bp MMTASFGYDTSSSMSLLPPDGAAAPSQDSAVDEKAKAQEPARFSEEQQQEback to top mRNA from alignment at C-linearis_contig104:312742..319580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.894.1 ID=mRNA_C-linearis_contig104.894.1|Name=mRNA_C-linearis_contig104.894.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6839bp|location=Sequence derived from alignment at C-linearis_contig104:312742..319580+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:312742..319580+ >mRNA_C-linearis_contig104.894.1 ID=mRNA_C-linearis_contig104.894.1|Name=mRNA_C-linearis_contig104.894.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3168bp|location=Sequence derived from alignment at C-linearis_contig104:312742..319580+ (Chordaria linearis ClinC8C monoicous)back to top |