mRNA_C-linearis_contig104.883.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: D8LE55_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE55_ECTSI) HSP 1 Score: 625 bits (1612), Expect = 1.140e-216 Identity = 343/495 (69.29%), Postives = 373/495 (75.35%), Query Frame = 1 Query: 814 RVQAEVDAKVAAEHHNEDVLLRKIRAQ------------------------------------------------------------GEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRVGAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSSPGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMRAPT 2118 RVQAEV+AK AAE NEDV+LRKI+AQ GEEDR+R QEAINTVL HLA A GL++DPRR L L+SWLLGLLAGY+ LKEGTLLLRQL+ETYLGKP LVRETSRVG ST H L A + F+ KAG A GEGWS R SGR EA+ AF DVVLAPDLK++VLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLA+CSGMDCAVMSGGDV PLGK+AVTELH LFRWAAKSPRGLLLFIDEAEAFLGKRS P MSE TRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYF+KYCA G++ S GL++ +SGWW+G AEGL I GVDE+L++GL+EEV GFSGREVEKLMLGVQSCAYGSEDGV+TADM+KRV T KA EHGAK +MRA T Sbjct: 18 RVQAEVEAKFAAEQQNEDVMLRKIQAQVINTKTYAFILGLAKDTWCRCLFLLNRRLACTLLGRNPVDSNGFGNMRTEVTSSLPSESLGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAAT 512
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A6H5JZK9_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK9_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 4.100e-164 Identity = 302/518 (58.30%), Postives = 336/518 (64.86%), Query Frame = 1 Query: 814 RVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRVGAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRL----------------------------------------------------------------ASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSSPGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDS------LLF----PIPDRKSR------AQLLV---QYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMRAPT 2118 RVQAEV+AK AAE NEDV+LRKI+AQGEEDR+R QEAINTVL HLA A GL++DPR W L + QL+ETYLGKP LVRETSRVG ST H L VA + F KAG A GEGWS R SGR EAM AF DVVLAPDLK++VLSLAVATRN+KRNGAPYRHLLLYGPPGTGKTMVAKRL A+ SGMDCAVMSGGDV PLGK+AVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRS P MSE TRNALNALLYNTGSASRRLMMVLATNRAE +++ L+ + LLF + DR ++LLV QYF+KYCA G++ S GL + +S WW+G AEGL I GVDE L++GL+EEV GFSGREVEKLMLGVQSCAYGSEDG++TADM+KRV T KA EHGAK MRA T Sbjct: 17 RVQAEVEAKFAAEQQNEDVMLRKIKAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRW--AKKPWTL---------EASMRRTGQLLETYLGKPSLVRETSRVGTLRSTNHCLLHVAKCLISFKCKKAGKASLEGEGWSPKRTRSGREEAMNAFRDVVLAPDLKEQVLSLAVATRNAKRNGAPYRHLLLYGPPGTGKTMVAKRLVSGLSNLSRSLEDGLDADPCCWNPSKRMLPRLFRHLSEFPRQGCQERLSKHSFTGTMRKTSCFQAAYSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE-VNKHQLEVSSTAPGPGGHLLFIRSIVLHDRTVLLLVHVVSRLLVSLSQYFHKYCATGKDGSSIDTGWGLFSKLSRWWRGSSAEGLTIDVGVDECLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGMVTADMIKRVATQKAKEHGAKVNMRAAT 522
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A835Z4U6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U6_9STRA) HSP 1 Score: 364 bits (935), Expect = 2.290e-115 Identity = 211/405 (52.10%), Postives = 259/405 (63.95%), Query Frame = 1 Query: 898 EEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRVGAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSSPGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSE-DGVLTADMLKRVVTHKANEHGAKAEMR 2109 EEDRKR EA+ TV HLA V L++DP + +++WLLGL AGY L+E L +++ LG+P LVRETSR GW R D K++VLSLA ATRN+++N AP+RHLLLYGPPGTGKTMVAKRLA+CSGMD A+MSGGDVGPLGKDAVTELH LF WA +S RG+LLFIDEAEAFLG RSS +SEDTRNALNALLY TG+AS M+VLATNRAEDLDEAVLDRMDDSLLFP+PD ++R QLL YF Y A S +R+GL +V W GG A + + AG+ E + +++V GFSGRE+ KL+L +Q+ +GS + LT +++RV KA EH K E+R Sbjct: 120 EEDRKRVLEAVRTVFEHLATGVVVLLSDPMKAAAVAAWLLGLAAGYFILREAIGLCGRVISARLGRPSLVRETSR----------------------------------GWH------------RKSEDAA-----KEQVLSLATATRNARKNRAPFRHLLLYGPPGTGKTMVAKRLAACSGMDYAIMSGGDVGPLGKDAVTELHSLFAWARRSKRGVLLFIDEAEAFLGSRSSSTLSEDTRNALNALLYQTGTASHSFMLVLATNRAEDLDEAVLDRMDDSLLFPLPDVEARRQLLALYFRSYIASLVASPDDGERQGLRWLVR--WGGGCAGRITVDAGIGEDQVCSFTKQVEGFSGREISKLLLSLQNAVFGSGGEHRLTKRLMERVFELKAAEHRRKLELR 471
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: V9EJ63_PHYPR (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EJ63_PHYPR) HSP 1 Score: 351 bits (900), Expect = 2.360e-107 Identity = 248/687 (36.10%), Postives = 363/687 (52.84%), Query Frame = 1 Query: 73 DLYDSVVPANTSDCLEKITALPLTTYELKYDSVKGRRHL-GPFGPDLEKAIPGSVEVHGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMWAQLEEQLAFDERMHVA----VDEMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRV-GAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMR 2109 D ++ AN S+ LE ++ L L YE KYDSV GR L G GP+L P V+V + Y G I L+N VVDK ++M+N+ A Q+L + + EE++ +++ VA +DE+ L +EA QL++++ I EAE + E V+ +E +++L L+ E+ ++R + + +++QEES + + +V+ ++ + N+D+ + +++ + E DR + +A+ +L L+AD ++L + L AG +E ++ +L+E LGKP L+RETSR GAFG FLR PA G+ A DVVL L+ +VL +A +TRN+ +GAPYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDVGPLG DAVTELH LF+WA SPRG+L+FIDEAEAFLG R++ MSE RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL YFN+Y A +T +G + S + +D ++ + G SGRE+ K+ML +QS Y + +T ++ RVV K +EH K E++ Sbjct: 54 DALQNIQDANVSESLELLSKLSLKRYEFKYDSVAGRTTLLGVLGPELRSIAPEVVQVLPER-YVFDRDGRGKIALQNFQVVDKDALYMHNLGATQQLL----LNFNRQEEEILALKQLTVAQQQKIDELKGYLEQEASVQLVQKRLIAEAELAQTEKLIEEARVRGEEERKTLDLKRDHXXXXXXXXXXXXXXXXXXEDAARRDQNRDLVQLQEESNVRIERARRETEEVLKEKQLAADHARALLERNTTLEKAAIDVEGRIRQQRANQDIEMAQLQQRLEADRVKLMQALQATFDNLGQGISVLLADKQKLTKFVGGFVALAAGIYLSREAIRIIGKLIEQRLGKPSLIRETSRSSGAFG---------------FLRALISQKPAKGQDELA---------------DVVLRSSLETRVLEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPETKERVRLLQMYFNEYVAHLAAPPATVTLKGKVDKASV---------SALPPVLDASVMTQYGDMTSGMSGREIAKMMLYMQSIVYAQDQVAVTLKLVDRVVKEKVDEHKRKLELK 696
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A329SI18_9STRA (AAA domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SI18_9STRA) HSP 1 Score: 348 bits (892), Expect = 3.920e-106 Identity = 250/686 (36.44%), Postives = 362/686 (52.77%), Query Frame = 1 Query: 73 DLYDSVVPANTSDCLEKITALPLTTYELKYDSVKGRRHL-GPFGPDLEKAIPGSVEVHGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMWAQLEEQLAFDERMHVA---VDEMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRV-GAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMR 2109 D +V AN S+ LE ++ L L YE KYDSV GR L G GPDL P V+V + Y G I L++ VVDK ++M+N+ A Q+L + Q EE LA + V +DE+ L +EA AQL++++ I EAE + E V+ +E +++L ++ + + ++ + + E+ ++R + + ++ S + + +V+ ++ + N+D+ + +++ + E DR + +A+ +L L+AD +L + L AG +E ++ +L+E LGKP LVRETSR GAFG ++RR PA G+ A DVVL L+ +VL +A +TRN+ +GAPYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDVGPLG DAVTELH LF+WA SPRG+L+FIDEAEAFLG R++ MSE RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL YFN+Y A S K L V A + +D ++ + G SGRE+ K+ML +QS Y + +T ++ RVV K +EH K E++ Sbjct: 55 DALQNVQEANVSESLELLSKLSLKRYEFKYDSVAGRTTLLGVLGPDLRSIAPEVVQVLPER-YVFDRDGRGKIALQDFHVVDKDALYMHNLGATQQLILN---LNRQEEEILALRQLTVVQQKKIDELQGYLEQEASAQLVQKRLIAEAELAQTEKLIEEAQVRGEEERKTLDVKRDHELQVESEKHALEHXXMQXEDAARRDQNRDLVQXXXXSNLRIERSRRETEEVLKEKQLAADHARALLERNTTLEKAAIDVEGRIRQQRANQDIEMAQLQQRLEVDRLKLLQALQATFDNLGQGISVLLADKEKLTKFVGGFVALAAGIYLSREAIRIVGKLIEQRLGKPSLVRETSRSSGAFGFLRALIRRK---------------PAKGQDELA---------------DVVLRSSLETRVLEIARSTRNAVLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANASPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPEGKERVRLLQMYFNQYVAHLAASPDAAKSTTLTGKVD------KASVSALPPVLDASVMAQYGDMTTGMSGREIAKMMLYMQSIVYAQDQVAVTLKLVDRVVKEKVDEHKRKLELK 700
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A1V9ZQ09_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ09_9STRA) HSP 1 Score: 356 bits (914), Expect = 4.320e-106 Identity = 239/695 (34.39%), Postives = 363/695 (52.23%), Query Frame = 1 Query: 46 SAGATAASY-DLYDSVVPANTSDCLEKITALPLTTYELKYDSVKGRRHLGPFG-PDLEKAIPGSVEVHGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMWAQLEEQLAFDERMHVAVDEMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRVGAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCA--PGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMRA 2112 +A AT+ Y + + V PAN + IT +PL ++E KYDS+ GRR LG G P + +P + V+ + S K + I ++N +DK +FM+N+ A Q L R+E ++L + + + L +EA A L+E ++I EA A +A E VKA+E +++L L Q E E++ + ++ E+ +R + E + +QE + + + +V+ ++ + N+D+ + +++AQ + ++ + A+ + +L + LMAD +L+ + L G F +E + QLVE LGKP LVRETSR G GW R+ + + DVV+ L+ ++ +LA +T+N+K++GAPYRHLLLYGPPGTGKTMVAKRLA CSGMD A+MSGGDVGPLG DAVTELH LFRWA SPRG+L+FIDEAEAFLG R++ MSE RNALNALL++TGS +++ M+V+ATNR EDLD A+ DR+DD+L F +P+ R +LL YF ++ PG +S K ++ G SGRE+ K ML +Q+ Y ++ ++T ++ RV++ K +EH K E+++ Sbjct: 415 TANATSVPYTEAFSRVEPANLTHSFNVITRIPLNSFEFKYDSIPGRRQLGLIGSPVTRELLPEGIHVYPERQVFSQEKEK--IAIQNFHAIDKDALFMHNIGATQVLIHRHEQTKSELNHLVRQVNTADEVLKTLQVHLDQEASAVLIEERKIAEANVRSAVIALESVKVKAEEERKNLELSKQNAFEVAEKENTLHTERIRFEDTQRRDQNRELVELQESANARMELQRRETEAILKQKQLDADKERMWLERNTTLEKAVIDVEGRIKQQRMNQDIEMAQLQAQFQAEKDKVMTALQAIFDNLGSGFMVLMADTDKLMKFIGSFVALAFGIYFTREAIRISGQLVEQRLGKPSLVRETSRRGGL-----------------------------YGWL--RSWFDKPLGVEPLSDVVVHAALETRLYNLAKSTKNAKKHGAPYRHLLLYGPPGTGKTMVAKRLAICSGMDYAIMSGGDVGPLGSDAVTELHALFRWAQASPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGSQTKQFMLVIATNRPEDLDSAITDRIDDALHFELPETNERIRLLELYFTEFVGNLPGGDSKECKA-----------------------------VLNKFGARTAGMSGREINKTMLYLQNMVYAQDEVIVTPTLVDRVISEKIDEHMRKTELKS 1047
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A8K1FJC0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC0_PYTOL) HSP 1 Score: 347 bits (889), Expect = 9.290e-106 Identity = 254/678 (37.46%), Postives = 363/678 (53.54%), Query Frame = 1 Query: 94 PANTSDCLEKITALPLTTYELKYDSVKGRRHLGPFGPDLEKAIPGSVEV-HGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMWAQLEEQLAFDERMHVAVDEMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRVGAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAP---GEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMR 2109 PANTS E IT +PL +E KYD++ GR LGP GP+++ +P V+V + Y S + + L N VVDK +FM+NVAA QEL + L++ + E + E+ A L +EA AQL+E++RI EAE +A E V+ +E +R+L + Q + + + +++R+L E+E ++ + + +++QE+S + XXXXXXXX + + E DR + +A+ +L A+ L+ D +L+ + L AG +E ++ +L+E LGKP LVRETSR + +LR + FL RA+ DVVL L+ +V +A + RN+ + APYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDVGPLG DAVTELH LF WA SPRG+L+FIDEAEAFLG R++ MSE RNALNALL++TG+ S+ M+V+ATNR EDLD AV DR+DD+L F +P++ R +LL YFN+Y G+ S TK + A + + E L + A + + G SGRE+ K+ML +QS Y +D +T +++RVV K +EH K +R Sbjct: 58 PANTSQSYELITQVPLKFFEFKYDAIAGRTQLGPLGPEVKTILPDGVQVVPQRVVYQSQQRQR--VELHNVHVVDKDSLFMHNVAATQELIGIEQRHTRDLKQLQSLVETQQARIKELEAYLEQEASAQLVEKRRIGEAEVTKAEKMIEEAKVRGEEERRTLLDKKQHEIDVENTKHSLAQRRLEEEDELRKQQNRDLVQLQEDSNLRLELKRRETEEVLKEKQLAVERERMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHQRLEADRVKLMQALQATFDNLGQGAMVLLTDKEKLIKFIGGFVTLAAGIFLSRETIRIVGKLIEQRLGKPSLVRETSRSSGI---LGLLRAI------FL--------------------PKRAKGQDELADVVLRETLETRVHEIAKSVRNAILHSAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFHWAKSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQSKHFMLVIATNRPEDLDTAVTDRIDDTLHFDLPEKTERVRLLEMYFNEYVGHLVGGDTSKKTKHKHDSAAVAAV-----EKENLALVASMSAY-----GDLTDGMSGREIAKMMLYLQSIVYAQDDVRVTQTLVRRVVHEKVDEHQRKLALR 694
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A662XUE1_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUE1_9STRA) HSP 1 Score: 347 bits (890), Expect = 1.020e-105 Identity = 240/686 (34.99%), Postives = 356/686 (51.90%), Query Frame = 1 Query: 73 DLYDSVVPANTSDCLEKITALPLTTYELKYDSVKGRRH-LGPFGPDLEKAIPGSVEVHGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMWAQLEEQLAFDERMHVAVDEMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRV-GAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAG---VDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMR 2109 D +V AN S+ LE +T L L +E KYDSV+GR + LG GP+L P +V++ + + G I L++ VVDK ++M+N+ A Q+L + +L + E +DE+ L +EA AQL++++ I EAE E V+ +E + +L L+ + + ++ +++++L ++ ++R + + +++QEES + + +V+ ++ E DR + +A+ +L L+AD ++L + L AG +E ++ +L+E LGKP LVRETSR GA+G + RR A+ DVVL L+ +V +A +TRN+ +GAPYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDVGPLG DAVTELH LF WA SPRG+L+FIDEAEAFLG R++ MSE RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL YFN+Y A + + + P +GA D ++ E HG SGRE+ K+ML +QS Y ++ V+T ++ RVV K +EH K +++ Sbjct: 63 DALTNVQDANLSESLELLTKLALKRFEFKYDSVEGRANQLGLLGPELRAVAPEAVQILPER-FVFDRDGRGKIALQDFHVVDKDALYMHNLGATQQLILQQRGHQQELLQLRKLTEVQQQKIDELQGYLDQEASAQLVQKRLIAEAELARTEKLIEETRVRGEEERATLDLKRDHELQLEAEKHALAQQRLQEDDAARRDQNRDLVQLQEESNVRMERTRRETEEVLKEKQLAADHVRALLEQNTTLEKASIDVEGRIXXXXXXXXXXXXXXXXXXEADRVKLMQALQATFDNLGQGVAVLLADKQKLTKFVGGFVALAAGIYLSREVIRIVGKLIEQRLGKPSLVRETSRSSGAWGFIRALFRR------------------------------NSAKGQNELADVVLRDALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFHWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPEAKERVRLLQMYFNEYVAHLTAPPAPAAAKEAGSFAK------PDSKAAVGALPVLADATIMAQYGELTHGMSGREIAKMMLYLQSIVYAQDEVVVTPKLVNRVVNEKVDEHKRKLDLK 711
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: K3WQW0_GLOUD (AAA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQW0_GLOUD) HSP 1 Score: 343 bits (880), Expect = 1.590e-104 Identity = 246/683 (36.02%), Postives = 363/683 (53.15%), Query Frame = 1 Query: 85 SVVPANTSDCLEKITALPLTTYELKYDSVKGRRHLGPFGPDLEKAIPGSVEVHGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQE-LAERNEAMWAQLEEQLAFDERMHVAVD-----EMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRVGAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCAPGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMR 2109 +V PAN S + I LP+ ++ KYD+ GR LG G +L++ P V+ K K I L+N VVDK +FM+N+AA Q + E+ E +EQ D R +A+ E+ A L +EA QL+E+++I EAE A E V+ +E +++L L+ + E + ++++++L E+ ++ + + + +QEES + + +V+ ++ + N+D+ + +++ + E DR + +A+ +L AV L++D +L + L AG F +E ++ +L+E LGKP LVRETSR GS + GF R A WS + + DVVL L+ +VL +A +TRNS +GAPYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDVGPLG DAVTELH LF WA SPRG+L+FIDEAEAFLG R++ MSE RNALNALL++TG+ SR M+V+ATNR EDLD AV DR+DD+L F +P+ R +LL YF++Y + K +N V+ ++ ++ G SGRE+ K+ML +QS Y ++ V+ ++ RVV K +EH K E++ Sbjct: 55 NVRPANASHSYDLIRKLPIKHFQFKYDANAGRTQLGCLGEELQEVYPDGVQFVPKRFVFDSEKQR--IALQNLYVVDKDSLFMHNLAATQVVIGEQQE------QEQDLHDARQTMAIHHERLVELQAYLDQEASVQLIEKRKITEAEVVHAEKLIEEARVRGEEERQTLELKRKNNLEVETTKHQLAQQRLEEEDAARLKQNRDLVALQEESNMRMEIKRRETEEVLKEKHLAADHQRALLEHNTTLEKAVIDVEGRIRQQRLNQDIEMAQLQQRLEADRVKLIQALQVTFDNLGQGAVVLLSDKEKLTKFIGGFVALAAGIYFSREAIRIIGKLIEQRLGKPSLVRETSR----GSGLW----------GFFR-------AFFPYWSKSKGKNNE------MADVVLHASLETRVLDIARSTRNSILHGAPYRHLLLYGPPGTGKTMVAKRLAKSSGMDYAILSGGDVGPLGSDAVTELHALFNWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQSRHFMLVIATNRPEDLDIAVTDRIDDTLHFNLPEESERVRLLQMYFDEYVGHMTAPAGSAKGDKQSNSVNP---------------LNATAMKQYGAMTEGMSGREIAKMMLYLQSIVYAQDEVVVMPKLIDRVVREKVDEHKRKLELK 687
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Match: A0A225WZW4_9STRA (AAA domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZW4_9STRA) HSP 1 Score: 338 bits (867), Expect = 1.030e-102 Identity = 244/691 (35.31%), Postives = 364/691 (52.68%), Query Frame = 1 Query: 73 DLYDSVVPANTSDCLEKITALPLTTYELKYDSVKGRRHL-GPFGPDLEKAIPGSVEVHGKSTYPSPIKGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMWAQLEEQLAFDERMHVA---VDEMGARLTEEADAQLLERKRIVEAEAEEARLAAELELVKAKEAQRSLGLEAQQKREALEQQLEISRRKLAAENESKRAETEEALRIQEESTRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQAEVDAKVAAEHHNEDVLLRKIRAQGEEDRKRNQEAINTVLTHLAGAAVGLMADPRRLLMLSSWLLGLLAGYLFLKEGTLLLRQLVETYLGKPGLVRETSRV-GAFGSTMHVLRRVAGSVGGFLRGKAGVAPAAGEGWSAGRATSGRAEAMRAFHDVVLAPDLKQKVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLASCSGMDCAVMSGGDVGPLGKDAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSS--PGMSEDTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFNKYCA--PGEESMSTKKRRGLANMVSGWWQGGPAEGLVIGAGVDEQLIRGLSEEVHGFSGREVEKLMLGVQSCAYGSEDGVLTADMLKRVVTHKANEHGAKAEMRAPT 2118 D +V AN S+ LE ++ + L YE KYDSV+GR L G GP+L P V+V + + G I L++ VVDK ++M+N+ A Q+L + +Q EE LA + + +DE+ L +EA AQL++++ I EAE + E V+ E + +L L+ + + ++ + ++++ ++ ++R + + +++QEES + + +V+ + DR + +A+ + +L L+AD ++L + L AG +E ++ +L+E LGKP LVRETSR GA G + RR ++ G+ E DVVL L+ ++L +A +TRN+ +GAPYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDVGPLG DAVTELH LF+WA SPRG+L+FIDEAEAFLG R++ MSE RNALNALL++TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ K R +LL YFN+Y A G+ + S N + + A V+ +D ++ E G SGRE+ K+ML +QS Y ++ V+T ++ RVV K +EH K E++ T Sbjct: 32 DALQNVQDANVSESLELLSKISLKRYEFKYDSVEGRTALLGVLGPELRAVAPEVVQVLPER-FVFDRDGRGKIALQDFHVVDKDALYMHNLGATQQLILD---LRSQEEEILALRQLTSIQQQKIDELQGYLEQEASAQLVQKRLIAEAELAKTEKLIEEAQVRGTEERTTLDLKRDHELQVENEKHALEKKRMVEDDAARRDQNRDLVQLQEESNIRIERARRETEEVLTEKQLAADHARALLERNTTLEKAAIDVEGRXXXXXXXXXXXXXXXXXXXXXDRVKLMQALQSTFDNLGQGVSVLLADKQKLTKFIGGFVALAAGVYLSREVIRIVGKLIEQRLGKPSLVRETSRSSGALGFLSALFRR--------------------------KSAKGQNE----LADVVLRSTLETRILEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLFHTGTQSKKFMLVVATNRPEDLDNAVTDRIDDTLHFDLPEAKERVRLLQMYFNEYVAHLAGQPASS--------NSILSTGKLEKASVSVLPPVLDANVMSQYGEMTTGMSGREIAKMMLYMQSIVYAQDEVVVTPKLVNRVVQEKVDEHKRKLELKTYT 680 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.883.1 >prot_C-linearis_contig104.883.1 ID=prot_C-linearis_contig104.883.1|Name=mRNA_C-linearis_contig104.883.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=709bp MGGLTISVVLAALLESAGATAASYDLYDSVVPANTSDCLEKITALPLTTYback to top mRNA from alignment at C-linearis_contig104:197776..204602+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.883.1 ID=mRNA_C-linearis_contig104.883.1|Name=mRNA_C-linearis_contig104.883.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6827bp|location=Sequence derived from alignment at C-linearis_contig104:197776..204602+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:197776..204602+ >mRNA_C-linearis_contig104.883.1 ID=mRNA_C-linearis_contig104.883.1|Name=mRNA_C-linearis_contig104.883.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4254bp|location=Sequence derived from alignment at C-linearis_contig104:197776..204602+ (Chordaria linearis ClinC8C monoicous)back to top |