mRNA_C-linearis_contig104.874.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: D8LL13_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL13_ECTSI) HSP 1 Score: 146 bits (369), Expect = 2.650e-39 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 1 Query: 1 EYFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 EYFLLKDSNTNHP DFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVT +TEYVRDPQFVSEEWNQ Sbjct: 608 EYFLLKDSNTNHPADFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTPITEYVRDPQFVSEEWNQ 677
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: A0A6H5JFJ7_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ7_9PHAE) HSP 1 Score: 134 bits (336), Expect = 7.440e-35 Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 1 Query: 1 EYFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 EYFLLKDSN NHP DFVKNKVTGIFFESKVDYTTWFG NVEYIHGIQNIPVTA+TE+VRD QF EEW+Q Sbjct: 427 EYFLLKDSNQNHPDDFVKNKVTGIFFESKVDYTTWFGDNVEYIHGIQNIPVTAITEFVRDAQFCKEEWDQ 496
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: D7FGU3_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU3_ECTSI) HSP 1 Score: 134 bits (336), Expect = 7.520e-35 Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 1 Query: 1 EYFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 EYFLLKDSN NHP DFVKNKVTGIFFESKVDYTTWFG NVEYIHGIQNIPVTA+TE+VRD QF EEW+Q Sbjct: 607 EYFLLKDSNQNHPDDFVKNKVTGIFFESKVDYTTWFGDNVEYIHGIQNIPVTAITEFVRDAQFCQEEWDQ 676
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: D7FTA2_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA2_ECTSI) HSP 1 Score: 125 bits (315), Expect = 5.140e-32 Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 1 Query: 4 YFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 YFLLKDSN NHP DFV+NKVTGIFFE K+DYTTWFG NVEYIHGIQNIPVTA+T YVR +FV EEW+Q Sbjct: 607 YFLLKDSNNNHPVDFVRNKVTGIFFEGKIDYTTWFGDNVEYIHGIQNIPVTAVTGYVRSAEFVREEWDQ 675
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: A0A813UQ71_9BILA (Endo-1,3(4)-beta-glucanase n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813UQ71_9BILA) HSP 1 Score: 107 bits (266), Expect = 2.120e-25 Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 4 YFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 YFL+ D NT P F+KNKVTGIFFE+K DY TWFGAN E+IHGIQ IP T +TE VR P+FV EEWNQ Sbjct: 571 YFLMSDDNTALPKQFIKNKVTGIFFENKADYATWFGANPEFIHGIQMIPATPITEEVRLPKFVEEEWNQ 639
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: K0KFI1_WICCF (Endo-1,3(4)-beta-glucanase n=1 Tax=Wickerhamomyces ciferrii (strain ATCC 14091 / BCRC 22168 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031 F-60-10) TaxID=1206466 RepID=K0KFI1_WICCF) HSP 1 Score: 105 bits (262), Expect = 7.370e-25 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 4 YFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 YFLL D N N P DF+ NKVTGI FE+KVDYTT+FG N EYIHGIQ IPVT+++ ++R P+F EEW+Q Sbjct: 648 YFLLADDNKNQPKDFIANKVTGILFENKVDYTTYFGTNTEYIHGIQVIPVTSVSSFIRGPKFTKEEWDQ 716
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: A0A2G4T8C4_RHIZD (Endo-1,3(4)-beta-glucanase n=5 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T8C4_RHIZD) HSP 1 Score: 102 bits (255), Expect = 6.510e-24 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 1 EYFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTA-MTEYVRDPQFVSEEWNQ 210 EYF + DSN N PP VKNKV GIFFE K+DYTT+FG +EYIHGIQ +P+T + EY+R PQFV+EEW+Q Sbjct: 613 EYFWMLDSNENRPPAMVKNKVAGIFFEQKIDYTTYFGRFIEYIHGIQQLPMTPILAEYMRTPQFVAEEWDQ 683
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: A0A1E3BSI4_9EURO (Endo-1,3(4)-beta-glucanase n=4 Tax=Aspergillus TaxID=5052 RepID=A0A1E3BSI4_9EURO) HSP 1 Score: 102 bits (253), Expect = 1.220e-23 Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 1 Query: 4 YFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWN 207 YFLL+ N NHPP+FV NKVTGI FE+KVD+TT+FG+N+EYIHGI +P+ + YVR+ +FV+EEWN Sbjct: 750 YFLLEKENINHPPEFVPNKVTGILFENKVDHTTYFGSNIEYIHGIHMLPLLPASSYVRNRKFVTEEWN 817
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: A0A6A3JNW1_9STRA (Endo-1,3(4)-beta-glucanase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JNW1_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.090e-23 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 4 YFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTAMTEYVRDPQFVSEEWNQ 210 YFL++D+N HPP+F NKVTGIFF++KVDY TWF A IHGIQ IPV+A+TE+VR QFV EEW+Q Sbjct: 663 YFLMEDANQIHPPNFRPNKVTGIFFDNKVDYATWFSAEKYCIHGIQMIPVSAVTEFVRTKQFVKEEWDQ 731
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Match: A0A8H7RPI0_9FUNG (Endo-1,3(4)-beta-glucanase n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RPI0_9FUNG) HSP 1 Score: 100 bits (248), Expect = 5.750e-23 Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 1 EYFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPVTA-MTEYVRDPQFVSEEWNQ 210 EYF KD N N P + VKNKV GIFFE KVDYTT+FG +EY+HGIQ +P+T + EY+R P+FVS+EW Q Sbjct: 618 EYFWFKDDNKNRPAEMVKNKVAGIFFEQKVDYTTYFGRFMEYVHGIQQLPMTPILAEYIRTPEFVSQEWTQ 688 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.874.1 >prot_C-linearis_contig104.874.1 ID=prot_C-linearis_contig104.874.1|Name=mRNA_C-linearis_contig104.874.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=70bp EYFLLKDSNTNHPPDFVKNKVTGIFFESKVDYTTWFGANVEYIHGIQNIPback to top mRNA from alignment at C-linearis_contig104:117238..118029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.874.1 ID=mRNA_C-linearis_contig104.874.1|Name=mRNA_C-linearis_contig104.874.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=792bp|location=Sequence derived from alignment at C-linearis_contig104:117238..118029- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:117238..118029- >mRNA_C-linearis_contig104.874.1 ID=mRNA_C-linearis_contig104.874.1|Name=mRNA_C-linearis_contig104.874.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at C-linearis_contig104:117238..118029- (Chordaria linearis ClinC8C monoicous)back to top |