Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 383 |
| Cds size | 366 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.3880777-UTR-C-linearis_contig104:73013..73030 | 1622927381.3880777-UTR-C-linearis_contig104:73013..73030 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig104 73014..73030 + |
| 1690879666.8617215-UTR-C-linearis_contig104:73013..73030 | 1690879666.8617215-UTR-C-linearis_contig104:73013..73030 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig104 73014..73030 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.3991504-CDS-C-linearis_contig104:73030..73396 | 1622927381.3991504-CDS-C-linearis_contig104:73030..73396 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 73031..73396 + |
| 1690879666.8706703-CDS-C-linearis_contig104:73030..73396 | 1690879666.8706703-CDS-C-linearis_contig104:73030..73396 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 73031..73396 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.867.1 >prot_C-linearis_contig104.867.1 ID=prot_C-linearis_contig104.867.1|Name=mRNA_C-linearis_contig104.867.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=122bp
MALLQELKQQQQQQQRLALPQESKQPRRQPNHPPCCCRRLLARRGSCDPV
KVRSAGGCVVCSVFGCVCVCAQSQQVCSSRSPVRSRSSVFSKMVLQGWFR
RRYDCARLLLCASSCVRTAVE* back to topmRNA from alignment at C-linearis_contig104:73014..73396+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig104.867.1 ID=mRNA_C-linearis_contig104.867.1|Name=mRNA_C-linearis_contig104.867.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=383bp|location=Sequence derived from alignment at C-linearis_contig104:73014..73396+ (Chordaria linearis ClinC8C monoicous)
GGGCGCCACAGCAGCGCATGGCGCTACTGCAGGAGTTGAAACAGCAGCAG
CAGCAGCAGCAGCGCCTGGCGCTCCCGCAGGAGTCGAAGCAGCCGCGGCG
GCAGCCGAACCACCCTCCATGCTGCTGCCGTAGGCTGCTGGCACGGAGAG
GCTCATGCGATCCCGTCAAGGTACGCAGCGCTGGTGGGTGTGTCGTGTGT
TCTGTGTTTGGGTGTGTGTGCGTGTGTGCGCAGTCACAGCAGGTGTGCAG
CAGCCGGTCCCCAGTGCGCAGCAGGTCGAGTGTGTTTTCAAAAATGGTTC
TCCAAGGCTGGTTCCGGAGGCGTTATGATTGCGCACGGCTTCTGCTGTGC
GCAAGCTCTTGTGTACGCACGGCGGTTGAATGA back to topCoding sequence (CDS) from alignment at C-linearis_contig104:73014..73396+ >mRNA_C-linearis_contig104.867.1 ID=mRNA_C-linearis_contig104.867.1|Name=mRNA_C-linearis_contig104.867.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at C-linearis_contig104:73014..73396+ (Chordaria linearis ClinC8C monoicous)
ATGGCGCTACTGCAGGAGTTGAAACAGCAGCAGCAGCAGCAGCAGCGCCT
GGCGCTCCCGCAGGAGTCGAAGCAGCCGCGGCGGCAGCCGAACCACCCTC
CATGCTGCTGCCGTAGGCTGCTGGCACGGAGAGGCTCATGCGATCCCGTC
AAGGTACGCAGCGCTGGTGGGTGTGTCGTGTGTTCTGTGTTTGGGTGTGT
GTGCGTGTGTGCGCAGTCACAGCAGGTGTGCAGCAGCCGGTCCCCAGTGC
GCAGCAGGTCGAGTGTGTTTTCAAAAATGGTTCTCCAAGGCTGGTTCCGG
AGGCGTTATGATTGCGCACGGCTTCTGCTGTGCGCAAGCTCTTGTGTACG
CACGGCGGTTGAATGAATGGCGCTACTGCAGGAGTTGAAACAGCAGCAGC
AGCAGCAGCAGCGCCTGGCGCTCCCGCAGGAGTCGAAGCAGCCGCGGCGG
CAGCCGAACCACCCTCCATGCTGCTGCCGTAGGCTGCTGGCACGGAGAGG
CTCATGCGATCCCGTCAAGGTACGCAGCGCTGGTGGGTGTGTCGTGTGTT
CTGTGTTTGGGTGTGTGTGCGTGTGTGCGCAGTCACAGCAGGTGTGCAGC
AGCCGGTCCCCAGTGCGCAGCAGGTCGAGTGTGTTTTCAAAAATGGTTCT
CCAAGGCTGGTTCCGGAGGCGTTATGATTGCGCACGGCTTCTGCTGTGCG
CAAGCTCTTGTGTACGCACGGCGGTTGAATGA back to top
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