mRNA_C-linearis_contig103.861.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A6H5L5K6_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K6_9PHAE) HSP 1 Score: 705 bits (1819), Expect = 9.170e-244 Identity = 432/718 (60.17%), Postives = 496/718 (69.08%), Query Frame = 1 Query: 73 ANPWDVFGSDSDEEPXXXXXXXXXXX-----AGTHLPAAKRKKKRYAWEALLPTFRFPPGFDVEGRGGSLEGQEADGGSTSVTGEATMAAGAAAAPARAPFSAPPVYQHPSVRYEPCLPHRGGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILELPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKA-SLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCR---PNAIKWRAGQSISDRK-PQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCEDSSXXXXXXXXXXSGTAGAELSAAALEEFVDRPRGD-ADAPDQPLAPLVAEASDKATSAE--QEETGASLSGGQ-------VEGREGTESEGGALELQDENGEQGHGGXXXXXXXXGRGGLVARNVLERRLEAAESVIDLSRAKEVRWAGVLSEVLGYRRQAAQWLAARHISLARVDKLIAKACVTILQVAGSTEAAQLDAECAEAVQHASDQLPPSFGECRGGDDMPPPPLEGSFKTRLLAVFLSALISRRKTQLLYLGDHPHPEAGACLADLSQAMGMLLAQGSEGEKWVERLPVFGDNLPNPCETAGG----GEPGEEV-----LWLGGGGVSGASLFERECGKAAKKIGALFDAPQ 2139
A+PWDVFGSDSDE+ XXXXXXX A LP A+RKK YAWE+LLP F+FPPGFD GG +E E S +G AG AA RAPF PPV+QHPSVRYE +PHRGGGRGF A+ DIAPGTLLL E+RFLPMPTA+ECG GGVGQEELCL+WILELPP +L+ VLGELRWLHPQSL+DLP+SEAA LMSRHE+TAK M+ +L + + + +A ++GLDV GIVRLFGALQSNGFASGIYLHPAMTNHSCR PNAIKWRAGQSISD + P RK + D G G SLLSEIRATE+IR G+E+TISYLEPRE+AL SRQ+RLKDQFGF+C C LCE + + +A A LE F+ + R + D P + TS E + ++ GG+ GR G E G L E+ GG RGGLVARNVLERRLEAAESV+DLSRAKEV+WAGVLSEVLGYRRQA++WL+ RHISLAR DKLIAKAC+ ILQ GSTEAAQ D CA AV AS+ LP SFG RG + PP +G FKTRLLAVF+++LISRRKTQLLYLGD PHPEAGACLADLSQAM MLL QGSEGE W+ RLP + N + GE G+E LW GGVSGASLFEREC K AK+IG LFDAP+
Sbjct: 2 ADPWDVFGSDSDEDQPAAIXXXXXXXXXXXPAAVSLPTARRKKILYAWESLLPRFQFPPGFD---EGGIIEKVE-----DSNSGAVAEDAGGPAA--RAPFCTPPVFQHPSVRYEGSMPHRGGGRGFTAATDIAPGTLLLAEKRFLPMPTAIECGQAGGVGQEELCLQWILELPPARLKRVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLRRESSATEAEAEAMGLDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRRQRPNAIKWRAGQSISDTQMPVSRKTGVNPDPAGEKG--SLLSEIRATELIRTGQEITISYLEPREIALASRQARLKDQFGFNCSCVLCEGHADHRQSNSEATAASAAVHERVAPLEAFLRQGRPEHQDEIAPPTCQKGGAVCRRNTSGEPGRNKSADGRKGGEDIGEDAFSPGRGGAEEGEGREWLGPEDAGHSVGGSGEEDEEEDRGGLVARNVLERRLEAAESVLDLSRAKEVKWAGVLSEVLGYRRQASRWLSGRHISLARADKLIAKACIAILQ--GSTEAAQSDVGCAAAVLQASNDLPMSFGGRRGLESTLPP-TKGGFKTRLLAVFVASLISRRKTQLLYLGDGPHPEAGACLADLSQAMTMLLGQGSEGETWIGRLPGHDSDGTNDAKVKSPREAKGEVGQEGVVGEGLWWCDGGVSGASLFERECDKVAKRIGRLFDAPR 704
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: D7FMG1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG1_ECTSI) HSP 1 Score: 647 bits (1670), Expect = 4.960e-222 Identity = 393/648 (60.65%), Postives = 458/648 (70.68%), Query Frame = 1 Query: 151 AGTHLPAAKRKKKRYAWEALLPTFRFPPGFDVEGRGGSLEGQEADGGSTSVTGEATMAAGAAAAPARAPFSAPPVYQ---------HPSVRYEPCLPHRGGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILELPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKA-SLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCEDSSXXXXXXXXXXSGTAGAELSAAALEEFVDRP--RGDADAPDQPLAPL-----------VAEASDKATSAEQEETGASLSGGQVE-GREGTESEGGALELQDENGEQGHGGXXXXXXXXG--RGGLVARNVLERRLEAAESVIDLSRAKEVRWAGVLSEVLGYRRQAAQWLAARHISLARVDKLIAKACVTILQVAGSTEAAQLDAECAEAVQHASDQLPPSFGECRGGDDMPPPPLEGSFKTRLLAVFLSALISRRKTQLLYLGDHPHPEAGACLADLSQAMGMLLAQGSEGEKWVERLPVFGDNLPNPCETAG 2016
A LP A+RK++ YAWE+LLP F+FPPGFD GG +E +E V+ +A A ARAPFS PPV+Q HPSVRYE +PHRGGGRGF A+ DIAPGTLLLVE+RFLPMPTA+ECG GGVGQEELCLRWILELPP +L+ VLGELRWLHPQSL+DLP+SEAA LMSRHE+TAK M+ +L + + + +A +LGLDV GIVRLFGALQSNGFASGIYLHPAMTNHSCR NAIKWRAGQSISD + K +G + G + SLLSEIRATE+IR G+E+TISYLEPRE+AL SRQ+RLKDQFGF C C LCE + + A + S A LE F+ + +G + D+ P V+ ++ +A+ E G + G GR G E G L E+G GH GXXXXXXXX RGGLVARNVLERRLEAAESV+DLSRAKEV+W GVLSEVLGYRRQA++WL+ RHISLAR DKLIAKAC+ ILQ GSTEAAQ D ECAEAV S+ LP SFG RG + PP +G FKTRLLAVF+++LISRRKTQLLYLGD PHPEAGACLADLSQAM MLL QGSEGE W+ RLP + N + G
Sbjct: 13 AAVSLPTARRKQRLYAWESLLPRFQFPPGFD---EGGIIEKRE-------VSNSGAVAGDAGGPAARAPFSTPPVFQARRVSAWAKHPSVRYEGSMPHRGGGRGFTAATDIAPGTLLLVEKRFLPMPTAIECGQAGGVGQEELCLRWILELPPARLKRVLGELRWLHPQSLQDLPESEAAALMSRHEETAKVMVAKLGRESSATEAEAEALGLDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRANAIKWRAGQSISDTQMPHSKKKGVNPNPAGE-KGSLLSEIRATELIRMGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCEGHAESRQSNSEAAAAAA-VDESFAPLEAFLRQGLRQGRPEHQDEVAPPTCQKGVEVCRRNVSGEPGRSKTADGGEGGEGIGGDAFNPGRGGAEEGEGRKWLGLEDG--GHSGXXXXXXXXXXXRGGLVARNVLERRLEAAESVVDLSRAKEVKWPGVLSEVLGYRRQASRWLSGRHISLARADKLIAKACIAILQ--GSTEAAQSDVECAEAVLQTSNDLPMSFGGRRGLESTLPP-TKGGFKTRLLAVFVASLISRRKTQLLYLGDGPHPEAGACLADLSQAMTMLLGQGSEGETWIGRLPGHDSDGTNDAKCQG 643
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A2D4C5Z6_PYTIN (SET domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Z6_PYTIN) HSP 1 Score: 125 bits (313), Expect = 8.430e-27 Identity = 92/273 (33.70%), Postives = 132/273 (48.35%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEE-----LCLRWILELPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCE-----DSSXXXXXXXXXXSGTAGAELSAAALEEFVD 1209
GG RG++A+ D+APGTL+LVE+ ++P P V+ Q + + +R IL P K+ + L LHPQ LEDLP A+L++ + L L K P A+LG+ +++ A+Q N F SG++LH A+ NH C PN IK+ P+ R E +SE+R ++ GE +TISYL PRE + R L++QFGF C C LC S GT+ A + + ALE D
Sbjct: 98 GGSRGYVATRDLAPGTLVLVEKAYVPWPMDVD--------QSDPSFFIVTVRNILREPSWKI--TVEHLGXLHPQRLEDLP----AELLTAGREKYDAQLAALLKEPE----VAALGVSHDTLLQNVFAMQCNAFDSGVFLHNAIFNHECNPNCIKFT---------PEDR--------------ERGVSEVRVARAVKXGEPLTISYLYPREQSRXRRLRNLREQFGFVCICALCRRGDSRSSRSRLARRSSSTDGTSAAHVLSIALEALSD 329
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A835YYH0_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH0_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.530e-26 Identity = 123/439 (28.02%), Postives = 172/439 (39.18%), Query Frame = 1 Query: 61 SLMAANPWDVFGSDSDEEPXXXXXXXXXXXAGTHLPAAKRKKKRYAWEALLPTFRF-PPGFDVEGRGGSLEGQEADGGSTSVTGEATMAAGAAAAPARAPFSAPPVYQHPSVRYEPCLPHRGGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILELPPTKLEEVLGELRWLHPQSLEDLPDSE----------------------------------------AADLMSRHEQTAKGMLLRLEK---SPAGGDGKASLGLDVRGIVRLFGALQSNG--------------FASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCEDSSXXXXXXXXXXSGTAGAELSAAALEEF 1203
+ A + W FGSD ++E A T P KR +A LP FR P G + E D + S+ APF P+ Q P +R+ LP+RGGGRG + D+APGTLLL E +PM + E G+G EE+C+ +L PP + + + LHPQ L + + DL + + + R + + A D +LGL ++RL AL NG F +G+YLH AM NHSCRPN IKW + + QQR S+++A I G E+T++Y+EP E +L SR + QF F C C LC + +G A E +AAA F
Sbjct: 2 NTTADSAWACFGSDDEDE--------GSVAAPTPAPPPSVTSKRTLPDAQLPWFRLIPVGLNTTTSTSQAPPAEVD--TASI----------------APFQHQPLLQAPCLRFS-LLPNRGGGRGMVVDTDVAPGTLLLAETPVVPMASFAERE-EAGIGPEEMCVMDLLMEPPEEAGPKYRDAQKLHPQCLPNAASRRRGRCCEQXXXXXXXXXXXXXXXXXXXXXXXXXRTHPCSPRSQDLAAVSPDKLRQLRARHDAVIAAAAETDTARALGLRADDVLRLLCALHWNGWRSRCCCVRVAARRFETGMYLHHAMLNHSCRPNCIKWAGVDAQYGGRRQQR------------------SDLQAVRHIPAGSEVTVNYIEPPEQSLRSRSRLIAAQFDFKCACELCTITPQSPLAPLEEVTG-ADREAAAAAEGAF 393
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: W4G1Y7_9STRA (SET domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1Y7_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.040e-22 Identity = 77/232 (33.19%), Postives = 115/232 (49.57%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILE-LPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLC 1113
GGGRG+ A+ DI GTLL+ ER ++ P + + L L + + L +E+ L LHP LEDLP A L + HE+ + L + D A VR +++ +Q N F SG++LH AM NH C PN +K+ ++S +SE+RA + I++G+++ ISY+ PRE + E RQ++L QFGF C CP+C
Sbjct: 80 GGGRGYYAARDIPAGTLLIRERAYVLWPDVDD--------RSALLLATVEQILQCDDADEIATNLAPLHPVVLEDLP---ATLLDAAHEEYTASLTALLARYGRDSDDNAI----VRRWLQVVLGMQCNAFTSGVFLHTAMFNHDCNPNCVKFTPESALS------------------------VSEVRAAKAIKQGDQLFISYVYPREQSRERRQAQLVRQFGFTCRCPMC 272
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A3L6VJX4_9STRA (SET domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VJX4_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.960e-22 Identity = 77/232 (33.19%), Postives = 115/232 (49.57%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILE-LPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLC 1113
GGGRG+ A+ DI GTLL+ ER ++ P + + L L + + L +E+ L LHP LEDLP A L + HE+ + L + D A VR +++ +Q N F SG++LH AM NH C PN +K+ ++S +SE+RA + I++G+++ ISY+ PRE + E RQ++L QFGF C CP+C
Sbjct: 338 GGGRGYYAARDIPAGTLLIRERAYVLWPDVDD--------RSALLLATVEQILQCDDADEIATNLAPLHPVVLEDLP---ATLLDAAHEEYTASLTALLARYGRDSDDNAI----VRRWLQVVLGMQCNAFTSGVFLHTAMFNHDCNPNCVKFTPESALS------------------------VSEVRAAKAIKQGDQLFISYVYPREQSRERRQAQLVRQFGFTCRCPMC 530
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A3F2RZL5_9STRA (SET domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZL5_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.510e-21 Identity = 79/263 (30.04%), Postives = 127/263 (48.29%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILE-LPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCEDSSXXXXXXXXXXSGTAGAELSAAALEEFV 1206
GG RG++A+ D+ PGT +LVE+ ++P P+ V+ E L + L +++ L +L+P+ L +LP DL++ + L K+ + L L +++ A+Q N F SG++L AM NH C PN +K+ + D P DGG +SE+R I++GE++TISYL PRE + E+RQ L++QFGF C C LC+ +G+ + LE+ +
Sbjct: 11 GGCRGYVAACDLQPGTQVLVEQVYVPWPSDVD------TSDPEFFLATMESVLSRPDYTDIMQHLGYLYPEKLSELP----GDLLAAGRTKYGPQVDELCKN------FSELTLTHDQVLQNVFAMQCNAFDSGVFLFNAMFNHDCNPNCVKF----APEDAGP-----------DGG------VSEVRVARPIKKGEQLTISYLYPREKSRENRQKNLREQFGFECKCELCKRGDSLLPPPPSAANGSESVKPDMQELEKVL 236
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A2P4X264_9STRA (Putative SET-domain transcriptional regulator protein, Zn-binding site n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X264_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.820e-21 Identity = 72/233 (30.90%), Postives = 112/233 (48.07%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILE-LPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCE 1116
GG RG++AS D+ PGT +LVE+ ++P PT V+ E L + L +++ L L+P+ L DLP+ A +++ + + L L +++ A+Q N F SG++L+ AM NH C PN +K+ + G E +SE+R I +GE++TISYL PRE + E+R+ L +QFGF C C LC+
Sbjct: 88 GGSRGYVASRDLMPGTQVLVEQVYVPWPTDVD------TSDPEFFLATMESVLSRPDYVDIMEHLGHLYPEKLSDLPEELLAAGRNKYGPQVDELCKNFSE----------LALSHDQVLQNVFAMQCNAFDSGVFLYNAMFNHDCNPNCVKFTPEDA---------------------GPEGGVSEVRVARPIAKGEQLTISYLYPREQSRENRRKNLWEQFGFECSCELCK 283
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A225WSW6_9STRA (SET-domain transcriptional regulator protein, Zn-binding site n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSW6_9STRA) HSP 1 Score: 107 bits (267), Expect = 6.850e-21 Identity = 73/233 (31.33%), Postives = 109/233 (46.78%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILE-LPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCE 1116
GG RG++AS D+ PGT +LVE+ F+P P V+ E L + L E++ L L+P+ L +LP A ++ + + L L +++ A+Q N F SG++L+ AM NH C PN +K+ + G E +SE+R I +GE++TISYL PRE + E+RQ L +QFGF C C LC+
Sbjct: 86 GGSRGYVASRDLEPGTQVLVEQMFVPWPNDVD------TADPEFFLATMESVLSRPDYVEIMEHLGHLYPEKLSELPQELLAAGRDKYGPQVDELCKNF----------SDLALTHDHVLQNVLAMQCNAFDSGVFLYNAMFNHDCNPNCVKFTPEDA---------------------GPEGGVSEVRVARPIAKGEQLTISYLYPREQSRENRQKNLWEQFGFECSCELCK 281
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Match: A0A3M6V9K2_9STRA (SET domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9K2_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.990e-20 Identity = 77/263 (29.28%), Postives = 120/263 (45.63%), Query Frame = 1 Query: 421 GGGRGFIASADIAPGTLLLVERRFLPMPTAVECGLGGGVGQEELCLRWILE-LPPTKLEEVLGELRWLHPQSLEDLPDSEAADLMSRHEQTAKGMLLRLEKSPAGGDGKASLGLDVRGIVRLFGALQSNGFASGIYLHPAMTNHSCRPNAIKWRAGQSISDRKPQQRKGQGHGDDDGGSGEESLLSEIRATEVIREGEEMTISYLEPREVALESRQSRLKDQFGFHCDCPLCEDSSXXXXXXXXXXSGTAGAELSAAALEEFV 1206
GG RG++A D+ PGT +LVE ++P P V+ E L + L +++ L L+P+ + DLP+ +L++ Q + L K+ + L L +++ A+Q N F SG++L+ AM NH C PN +K+ + G E +SE+R I +GE++TISYL PRE + E+RQ L +QFGF C C LC+ G + S LE+ +
Sbjct: 88 GGSRGYVAVKDLKPGTKVLVEHVYVPWPRHVD------TSDPEFFLATMESILSRPDYSKIMKHLGHLYPEQVSDLPE----ELLAAGRQKYDPQVSELCKN------FSELALSHDQVLQNVFAMQCNAFDSGVFLYNAMFNHDCNPNCVKFTPEDA---------------------GPEGGVSEVRVARPIVKGEQLTISYLYPREQSRENRQKNLWEQFGFVCKCQLCQRGDSVMPPPPSAAESIDGTKPSMQDLEKML 313 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.861.1 >prot_C-linearis_contig103.861.1 ID=prot_C-linearis_contig103.861.1|Name=mRNA_C-linearis_contig103.861.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=694bp MAANPWDVFGSDSDEEPSAATPTPTPIPAGTHLPAAKRKKKRYAWEALLPback to top mRNA from alignment at C-linearis_contig103:559456..567676+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig103.861.1 ID=mRNA_C-linearis_contig103.861.1|Name=mRNA_C-linearis_contig103.861.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8221bp|location=Sequence derived from alignment at C-linearis_contig103:559456..567676+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig103:559456..567676+ >mRNA_C-linearis_contig103.861.1 ID=mRNA_C-linearis_contig103.861.1|Name=mRNA_C-linearis_contig103.861.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4164bp|location=Sequence derived from alignment at C-linearis_contig103:559456..567676+ (Chordaria linearis ClinC8C monoicous)back to top |