mRNA_C-linearis_contig103.814.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.450e-100 Identity = 193/340 (56.76%), Postives = 210/340 (61.76%), Query Frame = 1 Query: 1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLE-EGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEA 909 +I+ E VC TSDGWT CANDTY+SLT TLIT+AWKLVTLSVDC KSEGTTTGDALAAGI A V KHGLTGKVTA+ TDCEPSMVKMGRLL + V T IGCCN+RLEST++IV NGP VKKVM LARG+VTRY TSSQAADRLKQFVKTYLG +NKRVIQDV VTGS VVPF YDLRNSLEDA++DL +LPP SDA+VNTA AAVMPC VLATAL PRTKI YGV ++ KADVWKLVQEEA Sbjct: 35 LIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV----------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEA 310
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 295 bits (755), Expect = 3.620e-91 Identity = 195/481 (40.54%), Postives = 247/481 (51.35%), Query Frame = 1 Query: 1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDV-CTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSS-DADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFM---------AAAQAVGDAPAQELGEGADSSTT----------------------------SLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERL 1218 M+ E+V T+DGWT +N++Y+SLTV I W+L LS++C K G+T G+ LA IT+ + +HGLTG+VTA TDCEPSMVK GRLLE G HIGC NHR+ESTT+ V NG + +A AR VV RY SSQ + RL F+ L V+QDV TRWWS+ +M+ RLL L AI HE+ D + P+L +W VL LI PIL PF Q LEG KYVTGS VP +LRN LE A+ DL A A AV+P V ATA+ PR K LYG+ A VW+ V +A AAQ VG P G+GA + + V +E+ +F+ + GI ++ +G KVY DPLDWWR R +FPHLA LARRVLAIP++QA SER+ Sbjct: 71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 295 bits (756), Expect = 4.260e-91 Identity = 208/512 (40.62%), Postives = 261/512 (50.98%), Query Frame = 1 Query: 1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLE-EGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNT-ARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQE--------LGEG-------------------------------ADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGT---KVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 M+ +E V T+DGWT N++Y+SLTV I WKL LS+DC K GTTTG+ LAA + V +H LTG+V A TDCEPSM+K GRLLE +G +HIGC NHR+ESTT+ V NG + + LAR +V RY SSQ A RL Q L E V+QDV TRWWST +MV RLL L AI HE+ D++ PLL +W VL LI PIL PF Q LEG +YVTGS + +LR LE A+ DL + + A AV P V ATAL PR K LYG+ A VW+ V A A A + PA + LG G AD L+ V +E+ AFKA+ GI+++ + K T KV+ +PLD WR + ++P LA LARRVLAIP++QA+SER+FS AG VT R+ L ELLV L Sbjct: 35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVA-IVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 290 bits (742), Expect = 1.150e-85 Identity = 192/542 (35.42%), Postives = 266/542 (49.08%), Query Frame = 1 Query: 4 IKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFM----------------------------------------------------AAAQAVGDAPA-----------------------QELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 + EHV TSDGWTP +NDTY+S T T I++ + LV L ++C+K T G+ L + A + ++GLTG+ AI TDCE SMVK GRLLEE + TH+GC HRLES T+ GPGV K +ALARGVVTRY+ SSQA+DRL+Q V + E K V+QDV TRWWST + RL+ L+ I +HE D PLL +W VL+L+ +L+PF Q LE K VT V P+ DL++ L++A+E L +++ V A+ V+ C VLATAL PR+K LYG+ + +DVW EA A++ + PA Q+ + S + + + E+ AFK + G+ + +++G +V PL+WWRV+ ++P LA+LARRVL IPA QA+SER+FS AG +VTK R + P L+V L Sbjct: 1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAV-SWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 279 bits (713), Expect = 1.360e-85 Identity = 176/451 (39.02%), Postives = 240/451 (53.22%), Query Frame = 1 Query: 4 IKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLN-------DLPPSSDADVNTARAAVMPC-------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 + EHV TSDGWT +NDTY+ T T I++ + LV L V+C+K G TTG+ L + A + ++GLT + A TDCEPSMVK GRLLEE + TH+GC HRLES T+ GPGV K +ALAR VVTRY+ SSQA+DRL+Q ++ + E K+V+QDV TRWWST + + RLL L+ I +HE D + PLL +W VL+++ P+ +PF +Q E K VT S V+P+ DLR+ L++A+E L + + DV A V P VLATAL PR+K LYG+ + +DVW+ V EA Q+ G + + E A + A A G K + + RVL IPA+Q +SER+FS AG +VTK R + P EL++ L Sbjct: 45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSLIPVEPA---AXXXXXXXXXXDFAAASAVPGDKQQSANASSS-----------------------TSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.310e-64 Identity = 125/204 (61.27%), Postives = 131/204 (64.22%), Query Frame = 1 Query: 814 VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXX-------------------------------------------FMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 VLATAL PRTKILYGV ++ KADVWKLV+EEA AQAVG A +L EGADSS LIT+SVRVEL AFK S GIKMY+ DKEG KVYLDPLDWWRVRC DFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTT ELLVLL Sbjct: 80 VLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 205 bits (522), Expect = 2.030e-58 Identity = 125/322 (38.82%), Postives = 174/322 (54.04%), Query Frame = 1 Query: 52 ANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEA 909 +NDTY++ T T I++ + LV L ++ +K G TTG+ L + A + ++GLTG+ A TDCEP MVK GRLLEE + +H+GC HR ES T+ GPGV K +AL RGVVTRY+ SSQA++RL+Q + E K+V+QDV TRWWST + D + PLL +W VL+L+ P+L PF Q LE K VT S V + DLR+ L++A+E L +++ V A+ ++ C VLATAL PR+K LYG+ + +DVW+ V EA Sbjct: 5 SNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWSTPREI----------------DSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEA 309
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI) HSP 1 Score: 139 bits (349), Expect = 4.160e-32 Identity = 129/454 (28.41%), Postives = 196/454 (43.17%), Query Frame = 1 Query: 28 TSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVK-HGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELK----VAIDKHEAADK----LDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMED---LNDLPPSSDADVNTARAAVMPC---------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVG-DAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYL---------DPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 T+D WT ++Y+ +T I W L++ ++ E T + LAA + K H V AI D ++V +L+E C H L+ L P + K ++ ARG+V S A+ +LKQ K +G ++IQDVA RW S+ M+ RLLE + + E + LD L +W +L+ + +L+P+ +L G+ YVT S + P L S ++ D +N ++ ++ + + ++A AL PR + L + + VQ EA Q VG +A A + T L T+S + G + ++ +Y DPL WW+ T FP LANLA+ LA+PAT SERLFS AGNIVTK R +L E+L L Sbjct: 173 TTDAWTSLVTESYLGVTCHFINDNWDLLSFNLATLPVEERHTAENLAAWVEKVAEKFHISLHNVLAIVHDNASNIVAALHILKEKFGVVSYRCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIRKSEPASTKLKQKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTQRGKQYLD--LKNDQWILLDELKEVLKPYEQATNVLSGQSYVTVSVLPPLLKGLLKSTQNKSFDSAAVNSFQNCAEEEILSRWQPEVSAFQADGKNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQREALDLKREQRSQLQQQHVGQEASASPPTKKRSVLDTLLGTDSEEEDCNENTDQGGDGENEAVRKEVLLYFGEAPIPRDNDPLTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 623
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU) HSP 1 Score: 137 bits (344), Expect = 9.370e-32 Identity = 124/458 (27.07%), Postives = 194/458 (42.36%), Query Frame = 1 Query: 1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGL-TGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPL------LPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDL----------NDLPPSSDADVNTARAAVMPCVLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLI-----TNSVRVELQAFKASQGIK----MYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 + KS+ + T+D WT A + Y+ +T I+ W+L + + E TG +AA I A+ + + + A+ D ++V +L+E + C H L+ + L P + K + AR +V + S A+ +LK K +G K++IQDV+TRW ST MV RLLE + + + + P L +W +LE + L+ F L G YVT S + P L+ S + E + +V + ++A AL PR + L + + V VQ A + ++ S SL T+S + + +Q I MY + +K +PL WW+ +P LA+LAR L IPAT SERLFS AGNI +K R +L P ++L L Sbjct: 77 LTKSK-IALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQKQ-MGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTYETAPVQAFQAAASQETTACWSREVTVKDDSPDTQIIAAALDPRFRKLKFLTPEERFSVQSKVQSLASQSMQEETAKKQCATENEESITCFKRTSNGSLDSLFGCDSSTDSDSETAEQYAQNQAITNEVLMYFGEHPLSKTE-NPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFL 531
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A1A8UYZ5_NOTFU (Uncharacterized protein (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8UYZ5_NOTFU) HSP 1 Score: 131 bits (330), Expect = 2.850e-30 Identity = 120/453 (26.49%), Postives = 192/453 (42.38%), Query Frame = 1 Query: 37 GWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVK-HGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPL------LPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMED---LNDLPPSSDADVNTARAAVMPC---------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKM-----YQLDKEGTKVYL---------DPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296 WT ++Y+ +T I W L++ ++ E T + LA+ + K H V AI D +MV +LEE C H L+ L P + K ++ ARG+V S A +LK+ K +G ++IQDVA RW S+ M+ RLLE + + + ++ P L +W +L + +L+P+ +L G+ YVT S + P L S ++ D +N S++ ++ + + ++A AL PR + L + + VQ++A VG QE + S++ + + + ++ I + ++ +Y DPL WW+ T FP LA LA+ LA+PAT SERLFS AGNIVTK R +L E+L L Sbjct: 1 AWTSLVTESYLGVTCHFINDNWDLLSFNLTTLPVEERHTAENLASWVEKVAEKFHISLHNVLAIVHDNASNMVAALHILEEKFGVVSYRCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIKKSEPATIKLKEKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTPRGKQYLDLKNDQWILLGELKEVLKPYEQATNVLSGQSYVTASVLPPLLKGLLKSTQNKSFDSAAVNIFQNSAEEEIMSRWQPEVSAFQEDGKNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQKDALDLKREQRSQLQQATVG----QEASASPPTKKRSVLDTLLGTDSEEEDCNENIDQGGDGENETVRKEVLLYFGEAPIPRDNDPLTWWKNNATRFPTLATLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 448 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.814.1 >prot_C-linearis_contig103.814.1 ID=prot_C-linearis_contig103.814.1|Name=mRNA_C-linearis_contig103.814.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=432bp MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTback to top mRNA from alignment at C-linearis_contig103:36585..38117+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig103.814.1 ID=mRNA_C-linearis_contig103.814.1|Name=mRNA_C-linearis_contig103.814.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1533bp|location=Sequence derived from alignment at C-linearis_contig103:36585..38117+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig103:36585..38117+ >mRNA_C-linearis_contig103.814.1 ID=mRNA_C-linearis_contig103.814.1|Name=mRNA_C-linearis_contig103.814.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2592bp|location=Sequence derived from alignment at C-linearis_contig103:36585..38117+ (Chordaria linearis ClinC8C monoicous)back to top |