mRNA_C-linearis_contig102.794.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI) HSP 1 Score: 1541 bits (3990), Expect = 0.000e+0 Identity = 939/1473 (63.75%), Postives = 1011/1473 (68.64%), Query Frame = 1 Query: 55 MSQQFLSKYFKRPGDTGDNASPKGSECK----------ALPKGIGRGRVASSXXXXXXXXXXXXXXXLKRKRIAGCRE-AEWNCPHCTFKNLDNKTKACGMCGRQGAIQGVSTATPEEVEILSSDPETSTANNTEAIRLSDDXXXXXXXXXXXXXXXKRTKAHNGLGKNK----------------------------QPRPSNRSSDSSSSGSPSRRAQEAAPLDSTLEVQEQEGGSASMSGTGRSSVFSGRASPTGSASSKA-----------------AFSASSFDLQENTKRRNAFQAGLKAALPDDEIPSATKARGSGSGLAVDSKEGGAGAE-----GAHSERSGTTSSXXXXXXXAAAGRVKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXX-TGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKE-DKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALN-GGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFEAAQASLSKYYGKGCTST--------------IRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRALASPGLVSFSQSQYMTLDAVTLRDLEV------------------------------------------------------------LQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELATDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGA---------RSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVS--------GDSG-------VDEIVLRGARHPTVERVLEGGFVPNDVSLRRGGCLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSK----AESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEMRDR 3975 MSQQFLSKYFKRPGDT D+ P GS K A P+ G AS XXXXXXXX R A+W CP CTF N K +AC MCG + G TA EE+EI SD E + + I DD RT A G NK Q +P D+ S R+ AA LD +E ++ GG + G S FSA SF+L+E+ +RR FQAGL+AALPDD + A G G XXXXXXX RVKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFG+DALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTE+GKKSGTFKRELAAVFSQATWVEGAVEALMP+S S GKS QGSFRKIGGAWR+VGGWG +G K E + + +P SEA+MD PLPQ+DH RSEQWLMS+YEEDAS GA++ GEPLSISIALN GG G EK+ E+VRVGLIAVDVR GKVVHD FEEGSGQRQELHTRLRHLRPLELL+PGPRLSK TEAT+ARYCESAVD+ G RRV+RTERLP E+FCFEAAQASLSKYYGKG S+ GDGC PVLTRVLDL RPA+CALGPLMTHLERFGLDR+LASP L SFS+SQYMTLDAVTLRDLEV LQCQADGREAGSLFS+LD TQTAFGRRVLAGWVRQPLLSPEDI ARQDAVEEL TDPP V+ERLRPTLRDLKDLDPAIASLHHRRIQP+RLLSLLGTMRKVF VFHPP R +GA RS VL +A+ VP M PV+AR+L EL+A AA SDDYV ALVDGESLCKEL A EEEEAAKA LE ELQS+R LRKPSLQWKTLRTG TSTVEYLVELRKSEAKKL PS WMQVSQTKDLARFHTPEVLRLQQELLRA+ESRN+AARQAWAELVSQVD+ECY GFRTAV ALGTLDALLSL+ VAKLPGYVRP+YRP + GD G VDEIVLRGARHPTVERVLEGGFVPNDVSLRRG CLVVTGPNMGGKSSTVRMAALICI+GQ+GS+V ADSA+MYCLDGV+TRMGAGDDLAADMSTFMVELWHTSYIIK AT+RSLVVLDELGRGTSTHDGVAIALATLRHVVRD+GCATLFVTHYPQVADLASDKSLSG V+NAHMSF+E+S G AE+ GVTFLYRLVVGQAHKSYGLNVARAAGMDE LIDLAARKSAEMRDR Sbjct: 1 MSQQFLSKYFKRPGDTNDD--PAGSSKKPAAKEKVKRQASPQTGSPGDAASGGSRYRETXXXXXXXXXXXXXXXDTRRSADWQCPKCTFNNPAAK-RACEMCGGHQVVGG--TAAREEIEISGSDSEADANSKSGGIGDDDDGSDFEDLPIGRNPKRPRTGA-GAQGSNKPTSSSSLXXXXXXXXXXXXXXXXXXXPGQSKPPPAGGDTCVS---LRKEGGAAALDGAMEEIQEIGGERGRARGGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFSADSFNLEEDARRRKDFQAGLRAALPDDSDDGPSVAXXXXXXXXXXXDNGAPGGXLXXXXXXXXXXXXXXXXXXXXXXXXXXXRVKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGDDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTETGKKSGTFKRELAAVFSQATWVEGAVEALMPSSSGSNTGTGGRSGTDAGKSGGQGSFRKIGGAWRRVGGWGKKGGKXXXXXXXXXEDSDQPGEPQPPSEADMDAPLPQLDHERSEQWLMSMYEEDASPGASTEGEPLSISIALNDGGGGGAEKQVERVRVGLIAVDVRTGKVVHDAFEEGSGQRQELHTRLRHLRPLELLLPGPRLSKETEATVARYCESAVDARGDRRVVRTERLPPEDFCFEAAQASLSKYYGKGRGSSKPDASEGEKDGNGXXGGDGC-APVLTRVLDLPRPAICALGPLMTHLERFGLDRSLASPDLSSFSKSQYMTLDAVTLRDLEVSTTVVLPRKDAIVFVAACCLVLSGVTSFSSLVPPGEVGGAEQKIGSWSTDSRAPEVIPSVLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVTDPPSVMERLRPTLRDLKDLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPTARGADETEGAGPSQQRGGPRSVVLLDALADVPANMAPVIARYLGELNAEAAASDDYVRALVDGESLCKELKTAAEEEEAAKADLETELQSVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSGWMQVSQTKDLARFHTPEVLRLQQELLRARESRNLAARQAWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPNYRPTADAKGDESGGDGGSDDEADGVDEIVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICILGQMGSYVAADSADMYCLDGVYTRMGAGDDLAADMSTFMVELWHTSYIIKQATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDIGCATLFVTHYPQVADLASDKSLSGTVRNAHMSFIEDSAXXXXXXXXXXXXXXXXXXXXXGVGNPKRNAEARGVTFLYRLVVGQAHKSYGLNVARAAGMDEALIDLAARKSAEMRDR 1463
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE) HSP 1 Score: 695 bits (1793), Expect = 1.240e-235 Identity = 396/609 (65.02%), Postives = 421/609 (69.13%), Query Frame = 1 Query: 2233 VLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELATDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGA---------RSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSG---------------VDEIVLRGARHPTVERVLEGGFVPNDVSLRRGGCLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEV-EAPGNCGGGS---KAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEMRDR 3975 VLQCQADGREAGSLFS+LD TQTAFGRRVLAGWVRQPLLSPEDI ARQDAVEEL DPP V+ERLRP LRDLKDLDPA ASLHHRRIQPSRLLSLLGTMRKVF +FHPP VR +GA RS VL +A+ VP M PV+AR+L EL+A AA S +R LRKPSLQWKTLRTG TSTVEYLVELRKSEAKKL PS WMQ AWAELVSQVD+ECY GFRTAV ALGTLDALLSL+ VAKLPGYVRP YRP + D G VDEIVLRGARHPTVERVLEGGFVPNDVSLRRG CLVVTGPNMGGKSSTVRMAALICIMGQV ELWHTSYIIKHAT+RSLVVLDELGRGTSTHDGVAIALATLRHVVRD+GCATLFVTHYPQVADLASDKSLSG VKNAHMSF+E+S A + + P N++EV E+ G G G+ E+ GVTFLYRLVVGQAHKSYGLNVARAAGMDE LI+LAARKSAEMRDR Sbjct: 2 VLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVADPPSVMERLRPALRDLKDLDPATASLHHRRIQPSRLLSLLGTMRKVFGIFHPPTVRGADKTEGAGSSQQGGGPRSAVLLDALADVPANMAPVIARYLGELNAEAAAS------------------------------------CVRTILRKPSLQWKTLRTGATSTVEYLVELRKSEAKKLVPSDWMQ-----------------------------------AWAELVSQVDEECYAGFRTAVQALGTLDALLSLAVVAKLPGYVRPKYRPTASDKGDESXXXXXXXDEADGVDEIVLRGARHPTVERVLEGGFVPNDVSLRRGECLVVTGPNMGGKSSTVRMAALICIMGQV------------------------------------ELWHTSYIIKHATRRSLVVLDELGRGTSTHDGVAIALATLRHVVRDIGCATLFVTHYPQVADLASDKSLSGTVKNAHMSFIEDSAAASTEETPVNEQEVGESAGGSGVGNLKRNTEARGVTFLYRLVVGQAHKSYGLNVARAAGMDEALIELAARKSAEMRDR 503
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A8H7Q3L1_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q3L1_9FUNG) HSP 1 Score: 527 bits (1358), Expect = 5.340e-164 Identity = 368/1010 (36.44%), Postives = 542/1010 (53.66%), Query Frame = 1 Query: 970 RVKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFC---FEAAQASLSKYYGK--GCTSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRALASPGLVS-FSQSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEEL-ATDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDEIVLR--GARHPTVERVLEGGFVPNDVSLRRGGC--LVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 + TP+E QVV+LK K+PGVLL++E GY+Y+FFGEDA A+K+L I +MDHNF AS+PT RL H+RRLV+AG+KVGVVRQ E+AALKA G K G F REL ++++ T+VE A + +G S GS +LM I EE+ GG G E+ VRVG++AV G +V+D+FE+ + R EL TR+ H++P ELL+P LS+ TE + + G +R ER+P + + AA +S +Y G S+ +GD + +L L + +L + +L F LD + FS +MTL+A T+ +LE+ + + E SLF +L+ T T+FG+R+L WV +PL++ ++ R +AVEEL +TD P V ++R L+ L DL+ + +H+ + PS LL +L + KV +FH A A + + + + + + ++ + + LD TA + V L + +E+++ + + ++ L +RK LR + Q+ T+ + +EYLVE++ +E KK+ P +W+++S TK ++RFHTP ++ +E + ++ IA+++A+ + + QV E YE FR V L LD LLSL+ VA PGY +P Y VD ++++ RHP VE++L GGFVPNDV +V+TGPNMGGKSS +R ALI IMGQ+GS+VPADSA + LD V+TRMGA D+L STFM+EL TS I+K AT RSLV+LDELGRGTSTHDGVAIA A L+H + + T+FVTHYP +A+L ++ S KN HM+F+EN KE+ E +TFLY+L G A +SYGLNVAR A + + ++D+A +K++EM Sbjct: 126 KTNYTPLEVQVVELKEKYPGVLLVIEVGYKYKFFGEDAKTASKILNIAHYMDHNFYCASIPTHRLPFHVRRLVNAGHKVGVVRQTETAALKAVG----DNKQGPFLRELRNLYTKGTFVEEMAAADIEGD-------------SGTSPGSGS----------------------------------------------------------NYLMCIVEEN------------------RGGGGPDER----VRVGIVAVQPATGDIVYDSFED-TYMRSELETRVLHIQPCELLLPAT-LSRPTEKLIQHIALQRTTAFGDN--VRVERIPKDMVFATDYNAAFTYVSDFYANATGSQSSSQGDVKSETLFAEILRLPEVIIKSLALTVKYLTDFQLDHVFKLTKYFNHFSSKSHMTLNANTMANLEIYRNSTNYGEKHSLFWILNHTNTSFGKRLLKRWVGRPLINKGLLEERTNAVEELISTDNPKV-PKIRSLLKHLPDLEKGLCRIHYGKSSPSELLQVLNALEKVAELFHQAAPVADIKFGSSLLNTIFDCLPLILEEVITLKSM----LDVTAVERGNDVTNLFQSDEPWQEISEYKLKINDTEQEFQEYLTELRKILRNSTTQYVTV-----AGIEYLVEVKNTELKKV-PQNWIKISGTKAVSRFHTPFIIAKAKEKEQYRDRLKIASQKAYQDYLHQVS-ERYELFRDVVQRLAQLDCLLSLATVAIQPGYCKPEY--------VDHLIMKVENGRHPMVEQLLSGGFVPNDVEFDSDASRTMVLTGPNMGGKSSYIRQVALIAIMGQIGSYVPADSARLGILDAVYTRMGALDNLQTGESTFMIELHETSDIMKQATARSLVILDELGRGTSTHDGVAIAYAVLQHFIAKIQSITIFVTHYPSLAELVNEHSEHA--KNCHMAFIEN------------KEDDE------------HSTLTFLYKLTNGVAMRSYGLNVARLANLPKSILDVAHQKASEM 988
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A8H7UJH4_MORIS (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UJH4_MORIS) HSP 1 Score: 510 bits (1314), Expect = 8.830e-158 Identity = 362/1010 (35.84%), Postives = 536/1010 (53.07%), Query Frame = 1 Query: 973 VKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFE----AAQASLSKYYG---KGCTSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRALA-SPGLVSFSQSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELATDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDEIVLR--GARHPTVERVLEGGFVPNDVSLRRGG--CLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 +K TP+E Q+V+LK K+PGVLL+VE GY+Y+FFG+DA A+K L I +MDHNF AS+PT RL H+RRLV+AGYKVGVVRQ E+AALKA G K G F REL +++++T+V+ V + +G SA +LM+I EE L GG G E+ V++G++AV G +++D FE+ + R EL TR+ H++P ELL+P LS+ TE + + G +R ER+ AE+ F AA +S +Y K TS+ G + + +L L + +L + +L F L+ + FS +MTL+A T+ +LE+ + + E SLF +L+ T TAFG+R+L WV +PL+ ++AR +AVEEL T I+ L LR L DL+ + +H+ + P+ LL +L ++++ VF N S +L + V +P + V++ L+ A D + L E+++ E+ + + L+ +RK LR + + T+ + +EYL+E++ +E KK+ P +W+++S TK ++RFHTP ++ +E + ++ IA+ A+ + + QV + YE FR V L LD LLSL+AVAK PGY +P Y VD + ++ RHP VE++L G FVPND+S +V+TGPNMGGKSS +R ALI IMGQ+GS+VPADSA++ +D V+TRMGA D+L STFM+EL TS I+K AT RSLV+LDELGRGTSTHDGVAIA A L+H + + T+FVTHYP +A+L ++ S KN HM+F+E+ + +D T +TFLY+L G A +SYGLNVAR A + ++++D A +K++EM Sbjct: 127 IKYTPLELQIVELKEKYPGVLLVVEVGYKYKFFGDDAKVASKTLNIAHYMDHNFYCASIPTHRLPFHVRRLVNAGYKVGVVRQTETAALKAVG----DNKQGPFLRELKNLYTKSTFVDELVVS-------------DIEEDSGASAGS------------------------------------------------------------NYLMTIVEE------------------LRGGGGPDER----VQIGIVAVQPATGDIMYDCFED-TYMRSELETRVLHIQPSELLLPAT-LSRPTEKLVHHMAVQRTTAFGDS--VRVERV-AEDIPFSKNYNAAFTHVSDFYAQSVKSQTSSQEGFKSET-LFAEILRLPEVVIKSLALTIKYLSDFHLEHVFKLTKYFTHFSSKSHMTLNANTMANLEIYRNSTNYGEKHSLFWILNHTHTAFGKRLLKRWVGRPLVDRAHLEARINAVEELITAENPKIKELASLLRQLPDLEKGLCRIHYGKSSPAELLKVLNALQRISQVF---INTMPMENTRFISPILNDIVDFLPTILEDVIS-LKSMLNIKAVERGDDMSELFQSHEPWPEISEFKEKIHETEQEFTEHLKELRKLLRNSTTSYVTV-----AGIEYLIEVKNTELKKV-PQNWIKISGTKAVSRFHTPFIISKTRERDQHRDRLRIASENAFRDYLQQVADK-YELFRDVVQRLAHLDCLLSLAAVAKQPGYCKPEY--------VDHVSIKVENGRHPMVEQLLGGNFVPNDISFDSNDYRTMVLTGPNMGGKSSYIRQVALITIMGQIGSYVPADSAQLGIVDAVYTRMGALDNLLTGESTFMIELHETSDIMKQATPRSLVILDELGRGTSTHDGVAIAYAVLQHFITQIRSITIFVTHYPSLAELVNEHS--DIAKNCHMAFIEDKV---DDDQST---------------------LTFLYKLTDGVAMRSYGLNVARLANLPKDVLDTAFKKASEM 986
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A8H3FZD5_9LECA (DNA mismatch repair protein n=4 Tax=Parmeliaceae TaxID=78060 RepID=A0A8H3FZD5_9LECA) HSP 1 Score: 513 bits (1320), Expect = 2.200e-157 Identity = 374/1034 (36.17%), Postives = 541/1034 (52.32%), Query Frame = 1 Query: 958 AAAGRVKLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIY--------------AHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLS-ISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFEAAQASLSKYYG-KGCTSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRAL-ASPGLVSFSQSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELATDPPGV-IERLRPTLRDLK-DLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTND-GARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDD---YVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKT----LRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDE--IVLRGARHPTVERVLEGGFVPNDVSLR--RGGCLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 A G KLTPME+Q +D+K KH L+++E GY+++F+GEDA AAK L I AH+D F AS+PT RL VH++RLV AG+KVG++RQ E+AALKAAG ++ F R+L ++++ T+++ +E L +AS GA S G P + + + + G EKV +GL+AV G V+HD FE+G R E+ TRL H+ P E+L+ G LSKAT+ + S + G + +R ER+ + A + +S +Y K S++ D +L VL LA L ++THL +GL+ + SFS +M L+ +L LE+ Q Q D E GSLF LD T+T FG+R+L WV +PLL D++ R AVEEL D P V +++++ L ++ DL+ ++ +++ + LL++L TM+++ F V S +D G RS+++ A+ +P VV+ +L +++ AA DD + V+ E + E + A +E+EL + R ++K + + T+ + +EYL+E+ + K + P+SW ++S TK ++RFHTPEV+RL QE + KE+ A A+A L++ + + Y+ FR V AL TLD LLSL+A+A PGYV+P Y DE I + RHP VE++L +VPND L R L++TGPNMGGKSS VR ALI IMGQ+GS+VPA+SA++ LD VFTRMGA D++ A STFMVEL TS I+K AT RSL++LDELGRGTSTHDGVAIA A L H+VR+ TLF+THY ++ LA +G +KN HM F E A + +TFLY + G AH+SYGLNVAR A + E ++D+AA KS E+ Sbjct: 222 AKKGASKLTPMEKQFLDIKQKHLDTLMIMEVGYKFKFWGEDARVAAKELSIVCIPGKFRFDEHPSEAHLDR-FASASIPTHRLHVHVKRLVGAGHKVGIIRQLETAALKAAG----DNRNAPFVRKLTNLYTKGTYIDD-IEGL---------------------------------------------------------------------------------------------EASVGAPSSGAPSTGYLVCITESNAKGWGTDEKVHIGLVAVQPATGDVIHDDFEDGF-MRSEIETRLLHIAPCEILIVG-HLSKATDKFVQHLSGSKTNVFGDK--VRLERVEKPKTMAVQAYSHVSNFYAEKMKASSVEKDEKASKILDNVLKLAEGVTICLSAMITHLTDYGLEHVFDLTKYFQSFSARSHMLLNGTSLTSLEIYQNQTDHTEKGSLFWTLDRTKTRFGQRLLRKWVGRPLLRKADLEERIAAVEELNDDQPTVRVDKVKHLLSQIRSDLEKSLIRIYYGKCARPELLTVLQTMQRIATEF----VSVKSPSDAGFRSSIINNAIAALPTIAEDVVS-YLDQINPEAAKVDDKYAFFREEVESEDIM--------EHKMGIASVEQELDAHRPVAAGKVKKMKVDYVTV-----AGIEYLIEIDNALLKNV-PASWAKISGTKKVSRFHTPEVVRLIQERDQHKEALAAACDAAFAGLLADISSK-YQSFRDCVQALATLDCLLSLAAIASQPGYVKPEY--------TDETCISVEQGRHPMVEQLLLDAYVPNDTGLASDRTRALLITGPNMGGKSSYVRQVALIAIMGQIGSYVPAESAKLGMLDAVFTRMGAFDNMMAGESTFMVELSETSDILKQATSRSLIILDELGRGTSTHDGVAIAQAVLDHIVREKKSLTLFITHYQNLSALAKGFE-NGELKNVHMRFTETGDAGQD--------------------------ITFLYEIGEGVAHRSYGLNVARLANVPESVLDIAAVKSKEL 1097
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A197JM36_9FUNG (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JM36_9FUNG) HSP 1 Score: 508 bits (1308), Expect = 3.490e-157 Identity = 372/1025 (36.29%), Postives = 541/1025 (52.78%), Query Frame = 1 Query: 982 TPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFC-FEAAQASLSKYYGKGCTST-----IRGDGCDVP----------VLTRVLDLARPAVCALGPLMTHLERFGLDRALA-SPGLVSFSQSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELA--TDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGV--DEIVLRGARHPTVERVL--EGGFVPNDVSLRRGGCL-------VVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 TP+EQQ +D+K ++P LL +E GY+YRFF +DA A++ L I MD NF AS+P RL VH+RRLV AG+KVGVV+Q E+AALK+AG KS F R+L ++++AT++E + + SF VGG K PSS Q++M I+E+ PL GG G E+ V++ +IAV G +V+D F +G R EL TRL HL+P EL+VP +SKATE +A G + +R ER + F ++ A + +S++Y I+G+G + +L VL L++ + AL +++HL FGL S F+ +M L+ T+ +LE+ + Q DG GSLF++LD T T FGRR+L WV +PL+ E ++ R DAVEE+ T ++ R L+ L D++ + +H+ + P L+++ T KV A+ T+ + G S +L + + + + FL L+ ++A +D +L D L + + + L++EL IRK LR+P L++ T+ S +EYLVE++ + K+ P +W+++S TK ++RFHTPEV++L + +E +A +A+A + E YE FR V L LD L SL+ VA LPGYV+P Y D+ V I ++ RHP VE++L G FV ND+ L L ++TGPNMGGKS +R AL+CIM Q+GS++PADSA + LD V+TRMGA D++ STFMVEL TS I+K AT+RSLV+LDELGRGTST DGVAIA A L+HVV+++ TLFVTHYP +AD+A + G V+N HM F+ ++ + + G GGG+ + + FLY+LV G + KSYGLNVAR A + LI A KS E+ Sbjct: 46 TPLEQQYLDIKGQYPDALLCIEVGYKYRFFDKDAEIASRELSIAHFMDRNFYTASIPIHRLDVHVRRLVHAGHKVGVVKQMETAALKSAG----DNKSAPFTRKLTNLYTKATFIESLDQD-----------------------EEQSF---------VGG-----------------------KAPSS-----------------QFIMCIHEQ-----------PL-------GGSGPDER----VKLAMIAVQPATGDIVYDEFVDGHF-RNELETRLLHLQPAELIVPTEPMSKATEKLFGHL--TAYSGRGTQEDVRIER--TDGFVKYDRAFSLVSEFYSSSLKEEQLKQKIKGEGGNADGQAKKSQKEALLKTVLGLSKELIVALSAILSHLTAFGLASIFRLSKYFECFTSRSHMLLNGNTIANLELYRNQTDGTSKGSLFAILDHTNTGFGRRLLKKWVGKPLVDKEALQERVDAVEEILALTGKNVYLDNARAVLKGLMDMEKGVCRIHYGKSSPKEFLAIVQTFMKVSAILPEEKRCRTNADFGLTSPMLNRLIGSLSNALEDS-QYFLEGLNKSSAAKNDKLLMFQD--ELIADKWPEILDIVTTEDDLKEELARIRKLLREPKLEFATV-----SAIEYLVEVKNKDTAKV-PKNWVKISGTKQVSRFHTPEVIQLMASKAQNQERLAMACERAFASFQHEFS-ERYEVFRDLVQNLAVLDCLFSLAVVACLPGYVKPQY---VDDAAVATTTIDIKNGRHPMVEQLLLSSGSFVANDIQLGTNPALGTDEKTIILTGPNMGGKSCYIRTVALLCIMAQIGSYLPADSARVSMLDAVYTRMGASDNIFGHESTFMVELQETSDILKMATERSLVILDELGRGTSTLDGVAIAYAVLKHVVKNIRAVTLFVTHYPSLADVAREFP-QGTVRNFHMGFMASAAGS-----------LSLSGG-GGGAVLDDMDIVFLYKLVPGVSLKSYGLNVARMAKLSGSLIKKAKVKSKEL 941
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A0L0H3Q5_SPIPD (DNA mismatch repair protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H3Q5_SPIPD) HSP 1 Score: 512 bits (1318), Expect = 5.990e-157 Identity = 366/1007 (36.35%), Postives = 528/1007 (52.43%), Query Frame = 1 Query: 982 TPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFEAAQASLSKYYGKGC-----TSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRALA-SPGLVSFSQSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELAT-DPPG--VIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDEIVLRGARHPTVERVLEGGFVPNDVSL---RRGGCLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 TP+EQQ +++KA HP LL+VE GY++RFFGEDA AAK L I A+ DH+ AS PT RL VH+++LV GYKVG+VRQ E+AALKA G K+ F R+L V+S+ T+V+ GGE D+ RS +L+ I EE+ G+ + ++ ++AV + G V+ D F++ + R EL TR+ H++P E+++PG LS TE + + CES S G +R ERL A+ L+++Y + T G + ++ L L R + L L+ +L +FGL+ L + +F+ +M L+A TL LE+ + Q D E GSL +LD T+T FG+R+L W+ +PL+ D++ R DAVEE+ D G I+R+R + L DL+ ++ +H+ R PS L + L K+ + F A + RS +LK+ + +P + V F ++ +AA SDD + D S E+ + E E + L L+ +R ++KP+L + T+ + +EYL+E+ ++A K+ PS+W+++S TK +ARFHTP V+ +E R +E A A+A V +V YE FR V ++ T+D LLSL+ VA PGY +P + P + ++++ RHP VE V+ +V NDV L RR CL++TGPNMGGKSS +R ALI IMGQ+GS+VPA SA++ D V TRMGA DDLA STFM EL TS I++ AT RSLV+LDELGRGTSTHDG AIA ATL++ + DL TLFVTHYP + L +K G ++N HM+F E +EE E+ SH + FLY+L G AH+SYGLNVAR A + EL+ A K+AE+ Sbjct: 252 TPLEQQFLEIKANHPDCLLVVEVGYKFRFFGEDAKIAAKELNIVAYRDHSMYTASFPTHRLHVHVKKLVQLGYKVGIVRQMETAALKAVG----DNKNAPFVRKLTNVYSKGTFVDDI--------------------------------------------GGE----------------------------DIAF----EVRSS-YLLCINEEE------------------------GKGAMDTAKISIVAVQLHTGDVIFDEFDD-NYMRNELETRMMHIQPTEIILPGNPLSDMTETLIRQLCES-FGSTGD--TVRIERLKGAFLDHATARKVLAEFYEQPILDNKPTGNDNGTALAAELYSQALSLPRRVIICLAALLKYLVQFGLEDILRLTKFFTAFASVAHMVLNANTLNSLEIFRNQTDFEEKGSLLWILDHTKTKFGQRLLKKWIGRPLVQLPDLQKRIDAVEEIIQGDAQGNVFIQRMRGLICQLPDLEKSVCRIHYGRCSPSELNNTLLAFEKIGSSFISDAW------EKFRSPILKDIYKSLP-AIKSDVMYFRGMINESAAKSDDKIEFFSDT-SKWPEIGEFKENLETVEEELLAHLKEVRGEIKKPNLTYVTV-----AGIEYLIEVPVNQASKV-PSNWIKISNTKAVARFHTPFVIEKIKERDRYREQLVAACDTAYAAFVREVGSR-YELFRGVVQSIATMDCLLSLATVAAQPGYCKPEFVPDA------TVLVKEGRHPMVENVVSS-YVTNDVDLTQDRR--CLLITGPNMGGKSSYIRQVALIVIMGQIGSYVPAKSAQLGIFDSVHTRMGASDDLAGGQSTFMKELQETSDIMRTATNRSLVILDELGRGTSTHDGTAIAFATLKYFIEDLKSITLFVTHYPVLGQL--EKEFPGALRNCHMAFHET------------EEEDES-----------SHSIIFLYKLTRGLAHRSYGLNVARLANLPNELLATAREKAAEL 1100
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: UPI0015B13C0E (DNA mismatch repair protein Msh3 isoform X1 n=3 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B13C0E) HSP 1 Score: 509 bits (1311), Expect = 2.510e-156 Identity = 366/1019 (35.92%), Postives = 529/1019 (51.91%), Query Frame = 1 Query: 982 TPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFEAAQASLSKYY-------------GKGCTSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRALASPGLVSFS----QSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELATDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHP--PAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDEIVLRGARHPTVERVL--EGGFVPNDVSLRRGG--CLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSM-ATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 TP+E Q +++K KH VLL VECGY+YRFFGEDA AAK L I+ H+DHNF AS+PT RL VH+RRLV GYKVGVV+Q E+ ALKA+G KS F R+L+A+++++T V V L+ GA E+ E + +D P +LM + E + + + +++ VGL+AV G V+ D F++G R EL R+ ++P+E+L+P LS+ TE L ++V + IR ERL + F F A +++ +Y G TS D L+ ++ L P +C LGP++ +L F L R L P SF ++ M+L A T+R+LE+L Q D + GSL VLD TQT FGRR++ WV QPL S +I+ARQDAV E+ + + +R L L DL+ I S++H++ + T+ ++ A PA+++ + ST LKE + +P + P FL L+ TAA + D D + + EE +A + + + + +R+ LR PSL + T+ S E+L+E++ S + + PS W++VS TK + R+H+P ++ + LL+ +E I + W + Q E Y R AV L TLD SL+ VAK Y RP + G+S +I++R RHP ++ ++ + +VPND L+ G +++TGPNMGGKSS +R AL+CIM Q+GSFVPA A + +DG++TRMGA D+L+ STFM EL S I+ AT RSLV+LDELGRGTSTHDG+AIA ATL +RD+ TLFVTHYP + +L ++ V N HM+F+ N M A A+D +A +TFLY+L G A +SYGLNVAR A + E +I AA KS E+ Sbjct: 201 TPLELQYLEIKEKHKDVLLCVECGYKYRFFGEDAEVAAKALNIFCHLDHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETTALKASG----ANKSAIFTRQLSALYTKSTLVGEDVNPLLT------------------------------------------------------LGALEEAE---DVVLDAP---------NNYLMCVSE-------------------------NWDSKTKELTVGLVAVQPSTGDVMLDCFKDGPP-RSELEARVLRIQPVEILLPSD-LSQTTEQLLRGIASASVQADDR---IRVERLDSSRFEFTTALRTVTDFYSDASHQKAGEADRGAAGTSLRTCHLHDSNSLSSIISLETPVICCLGPVIQYLADFNLQRVLTCPS--SFRRLSCEADCMSLSATTMRNLEILCNQTDCKVRGSLLWVLDHTQTPFGRRLMKKWVSQPLKSATEIRARQDAVAEVLSSEHSALPSVRALLCRLPDLERGICSIYHKKCSTQEFYLISSTLSRLGAELQALVPAIQSQLS-----STHLKELLTELPRLLAPAQG-FLSVLNETAAKTGDKTQLFADLTDF-PVIRERKEEIQAVLSDILEHRREVRRVLRNPSLDYVTV-----SGQEFLIEVKNSLSSSV-PSDWVKVSSTKAVGRYHSPFIVEKHRRLLQLREQLVIDCGREWTNFLQQFG-EHYHIMRKAVCHLATLDCFFSLADVAKQGNYCRPEV--LEGES---QIIIREGRHPVIDVLIGEQEQYVPNDTELQGDGRRTMIITGPNMGGKSSYIRQVALVCIMAQMGSFVPAREATLGIVDGIYTRMGASDNLSRGRSTFMEELLEASEIVSRATSRSLVILDELGRGTSTHDGIAIAYATLEFFIRDVKSLTLFVTHYPPLCEL--ERVFPQHVGNYHMAFLLNEMDAQADD------------------EEARPEFITFLYQLTEGAAARSYGLNVARLAEVPESVIRTAALKSKEL 1078
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: UPI0018646986 (DNA mismatch repair protein Msh3 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018646986) HSP 1 Score: 507 bits (1305), Expect = 8.390e-156 Identity = 357/1005 (35.52%), Postives = 526/1005 (52.34%), Query Frame = 1 Query: 982 TPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIYAHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFEAAQASLSKYYGKGCTSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRALASPGLVSFSQ----SQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEELATDPPGVIERLRPTLRDLKDLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHP--PAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDDYVLALVDGESLCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTSTVEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDEIVLRGARHPTVERVL--EGGFVPNDVSLRRGG--CLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAEDGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 TP+E Q +++K KH LL VECGY++RFFGEDA AA+ L I+ HMDHNF AS+PT RL VH+RRLV GYKVGVV+Q E+ ALKA+G KS F R+L+A+++++T V V L+ K+G D E + + +D P +LM +YE S + +A+++ VGL+AV G V+ D F++G R EL TR+ ++P+E+LVP LS+ TE L ++ + IR ER + +F F AA +++++Y TS + D L+ ++ L P +C LGP++ +L F L+R L SF Q + M L A T+R+LE+L Q D + GSL VLD TQT FG R++ WV QPL S +I+ARQDAV E+ + + LR L L DL+ I S++H++ + T+ ++ P +++ + S +LK+ V +P ++ V FL L+ AA + D D + + E+ ++ +++ + +R LR PSL + T+ S E+L+E++ S + + P W++++ TK + R+HTP ++ ++LL+ +E I + W + Q E Y + AV L TLD L SL+ VAK Y RP G +IV+R RHP ++ ++ + +VPND L+ G +++TGPNMGGKSS +R AL+ +M Q+GSFVPA A + +DG++TRMGA D+L+ STFM EL S I+ AT RSLV+LDELGRGTSTHDG+AIA ATL + VRD+ TLFVTHYP + +L +K V N HM+F+ N +DG EE++ +TFLY++ G A +SYGLNVAR A + E +I AA KS E+ Sbjct: 208 TPLELQFMEIKEKHKDTLLCVECGYKFRFFGEDAEIAARELNIFCHMDHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETTALKASG----ANKSALFTRQLSALYTKSTLVGEDVNPLL---------------------------KLG------------------------------DLEEAEDVVLDAP---------NNYLMCVYE-------------------------SWDGQAKELTVGLVAVQPSTGDVLLDCFKDGPS-RSELETRVMRVQPVEILVPSD-LSQTTERLLQSIASASTQADDR---IRIERRDSSQFEFAAAMQTVTRFYSD--TSRQKSGVSDPGTLSSIISLDSPVICCLGPVIEYLIEFNLERVLLCTS--SFKQLSCEADCMILSATTMRNLEILCNQTDRKVKGSLLWVLDHTQTPFGSRLMKKWVSQPLKSATEIQARQDAVAEILSSKSSALPSLRALLSRLPDLERGICSIYHKKCSTQEFYLISSTLSRLGMELQALVPTIQSHLS-----SALLKDLVLALPQ-LLASVQDFLNVLNEKAAKAGDKTQLFADLTEF-PVIRERKEQIQSVICDIQEHRREVRLVLRNPSLDYVTV-----SGQEFLIEVKNSMSSTVPPD-WVKINSTKVVGRYHTPFIVERYRQLLQLREQLVIDCGREWINFLQQFG-EHYHIMKKAVCHLATLDCLFSLADVAKQGSYCRPQVL-----EGEMQIVIREGRHPAIDLLMGEQDQYVPNDTDLQGDGKRAMIITGPNMGGKSSYIRQVALVAVMAQLGSFVPAQEAMVGIVDGIYTRMGASDNLSRGRSTFMEELLEASEIVSRATSRSLVILDELGRGTSTHDGIAIAYATLEYFVRDVKSLTLFVTHYPPLCEL--EKVFPQHVGNYHMAFLLNEPDGQDDGL---DEELQP------------EFITFLYQVTEGAAARSYGLNVARLAEIPEAIIRTAALKSKEL 1072
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Match: A0A8A3NXC9_9HELO (DNA mismatch repair protein n=1 Tax=Monilinia vaccinii-corymbosi TaxID=61207 RepID=A0A8A3NXC9_9HELO) HSP 1 Score: 507 bits (1306), Expect = 2.150e-155 Identity = 381/1026 (37.13%), Postives = 545/1026 (53.12%), Query Frame = 1 Query: 976 KLTPMEQQVVDLKAKHPGVLLLVECGYRYRFFGEDALAAAKVLRIY--------------AHMDHNFQVASVPTFRLAVHLRRLVDAGYKVGVVRQAESAALKAAGLTESGKKSGTFKRELAAVFSQATWVEGAVEALMPASISSGXXXXXXXXXTGKSAAQGSFRKIGGAWRKVGGWGGEGEKGAGSSPPEGEAGAKEDKEPSSEAEMDVPLPQVDHARSEQWLMSIYEEDASTGAASRGEPLSISIALNGGDGSGEKEAEKVRVGLIAVDVRIGKVVHDTFEEGSGQRQELHTRLRHLRPLELLVPGPRLSKATEATLARYCESAVDSLGHRRVIRTERLPAEEFCFEAAQASLSKYYG-KGCTSTIRGDGCDVPVLTRVLDLARPAVCALGPLMTHLERFGLDRAL-ASPGLVSFSQSQYMTLDAVTLRDLEVLQCQADGREAGSLFSVLDCTQTAFGRRVLAGWVRQPLLSPEDIKARQDAVEEL---ATDPPGVIERLRPTLRDLK-DLDPAIASLHHRRIQPSRLLSLLGTMRKVFAVFHPPAVRATSTNDGARSTVLKEAVRGVPDGMVPVVARFLRELDATAAVSDD-YVLALVDGES--LCKELAKAGEEEEAAKAGLEKELQSIRKTLRKPSLQWKTLRTGVTST-VEYLVELRKSEAKKLAPSSWMQVSQTKDLARFHTPEVLRLQQELLRAKESRNIAARQAWAELVSQVDKECYEGFRTAVHALGTLDALLSLSAVAKLPGYVRPSYRPVSGDSGVDEIVLRGARHPTVERVLEGGFVPNDVSLR----RGGCLVVTGPNMGGKSSTVRMAALICIMGQVGSFVPADSAEMYCLDGVFTRMGAGDDLAADMSTFMVELWHTSYIIKHATQRSLVVLDELGRGTSTHDGVAIALATLRHVVRDLGCATLFVTHYPQVADLASDKSLSGGVKNAHMSFVENSMATAE-DGPPTNKEEVEAPGNCGGGSKAESHGVTFLYRLVVGQAHKSYGLNVARAAGMDEELIDLAARKSAEM 3966 KLTPME QV+D+K KH LL+VE GY+++FFGEDA AAKVL I AH+++ F AS+P RL VH +RLV AG+K+G+VRQ E+AALK AG ++ F R+L V+++ T+++ VE L SG GA + G L I+ G G+ EK V VG++AV G V++D FE+G R E+ TRL H+ P ELL+ G L+KAT+ + S + G R IR ER+ + + A ++++Y K + + +L +VL L+ P L ++TH+ +GL+ + SFS +M L+ TL LE+ Q D E GSLF LD TQT FGRR+L WV +PLL + ++ R AVEEL A P +++L TLR+++ DL+ ++ +++ + LL++L TM ++ F A T ++ G S +L EAV +P + ++ FL +++A AA DD Y L D E+ +C+ G +E++L++ R T+ +L KT T VT+ +EYL+E+ S+ K + P+SW ++S TK L+RFHTPEVL+L +E + KES + A A+A ++++ Y R + LGTLD LLSL+ VA PGY +P++ S EI + G RHP VE++L ++PN SL + L++TGPNMGGKSS VR ALICI+ Q+GS+VPA+SA + LDG++TRMGA D L STFM+EL T+ I+K A RSLV+LDELGRGTSTHDGVAIA A L VVR++ C LF+THY +A +A+ ++N HM F TAE +G + +V G GG E +TFLY + G AH+SYGLNVAR AG+ + ++D AA KS E+ Sbjct: 208 KLTPMELQVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSEAHLNY-FASASIPVHRLHVHAKRLVAAGHKIGIVRQTETAALKKAG----DNRNAPFVRKLTNVYTKGTYIDD-VEGLDSTDGPSG-----------------------------------------------------------------------------------------GAPATGYLLCITETKPKGWGADEK----VEVGILAVQPATGDVIYDNFEDGF-MRSEIETRLLHIAPCELLIVG-ELTKATDKLVQHLSGSTTNVFGDR--IRLERVERAKTMAAESYAHVTQFYADKLKAHQSSHNEREQELLEKVLKLSEPVTMCLSAMITHMTEYGLEHVFDLTKYFQSFSARSHMLLNGNTLTSLEIYTNQTDHTEKGSLFWTLDKTQTKFGRRLLRKWVGRPLLDKQRLEERVAAVEELKDHAHTPK--VDKLNATLREVRSDLERSLLRIYYGKCTRPELLTVLQTMHRISNEF---AHVKTPSDAGFASVLLNEAVASLP-AIGEIILPFLDKINAQAARQDDKYAFFLEDYETEEICEHKCGIG--------AVEQDLEAHR-TVAATTLSKKTPVTYVTTAGIEYLIEVPNSDLKNV-PASWAKISGTKKLSRFHTPEVLKLLRERDQHKESLSSACATAFAAFLAEISTH-YAAIRDTLSHLGTLDCLLSLATVASRPGYCKPTF------SATTEICVTGGRHPMVEQLLPSTYIPNHTSLATDPDQTRALLITGPNMGGKSSYVRQVALICILAQIGSYVPAESARLGLLDGIYTRMGAYDSLFTAQSTFMLELSETAAILKSAGPRSLVILDELGRGTSTHDGVAIAEAVLDWVVREMKCLCLFITHYQTLASVANGFEKGKELRNVHMKF------TAERNGRRVSHTDV---GKDRGGVDEE---ITFLYEVGEGVAHRSYGLNVARLAGVPKAVLDTAASKSREL 1095 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.794.1 >prot_C-linearis_contig102.794.1 ID=prot_C-linearis_contig102.794.1|Name=mRNA_C-linearis_contig102.794.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1326bp TCFAPPRAASPQRLLYAGMSQQFLSKYFKRPGDTGDNASPKGSECKALPKback to top mRNA from alignment at C-linearis_contig102:432611..445152- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig102.794.1 ID=mRNA_C-linearis_contig102.794.1|Name=mRNA_C-linearis_contig102.794.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12542bp|location=Sequence derived from alignment at C-linearis_contig102:432611..445152- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig102:432611..445152- >mRNA_C-linearis_contig102.794.1 ID=mRNA_C-linearis_contig102.794.1|Name=mRNA_C-linearis_contig102.794.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7956bp|location=Sequence derived from alignment at C-linearis_contig102:432611..445152- (Chordaria linearis ClinC8C monoicous)back to top |