mRNA_C-linearis_contig102.790.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A6H5K3X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X2_9PHAE) HSP 1 Score: 583 bits (1502), Expect = 5.820e-191 Identity = 294/488 (60.25%), Postives = 334/488 (68.44%), Query Frame = 1 Query: 1081 ASASASAEDEAAVVELVGMGFDREHVVRALGECERGESWKEAAISLLLEPQTSMTPESR--LSGGARHEVAG-QGLSGHA-AGGSSACPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNT-CSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQRVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTPFTEQQPEVAARSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMACRDPKHAHHIYQLINGSMPLAAAS 2529 AS +A+A DE A+ ELVGMGFDREHVVRAL EC RGESWKEAAISLLLEPQ S E+ LSG R A QG + A A S CP+C DI+AGEVFTVDC++QH FCV CLH HC VQLLD+ LIPACPLS C HEL QEEVERVFLLK+YSS G + + +RRALD C LLT RGL+STGA+PC SPECGNWMV EGGGQRVKC +CL+EFC CKR+P+HY A CDEVV + R WS WL+EGKA FL AMAAQ+ +++ALLD RME+WKE RCRCCP+CGR +EKLSGCD MVCGVD HGGNVQNGCG F+WS+A PY+GDRGE K TPFTEQ+P AARSRHFIA+GI LRCDRCHRDVVGPLFRCVHCPSFACCLECQD+A DP+H HHI++L+NG A+S Sbjct: 256 ASPAAAAADEEAIFELVGMGFDREHVVRALKECGRGESWKEAAISLLLEPQVSSLAEAEEGLSGTGRQGAAAMQGFADAAPAASQSPCPVCFEDIQAGEVFTVDCEEQHTFCVDCLHHHCRVQLLDSALIPACPLSTMKCGHELGQEEVERVFLLKSYSSASAGGKDGGETTGASEEDRRALDTCRNLLTRRGLESTGAIPCASPECGNWMVPEGGGQRVKCASCLVEFCSRCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQEDQHRALLD--------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXRMEEWKEQRCRCCPRCGRTIEKLSGCDSMVCGVDTHGGNVQNGCGKSFLWSQARPYRGDRGECKVTPFTEQEPAAAARSRHFIADGIALRCDRCHRDVVGPLFRCVHCPSFACCLECQDIASNDPRHVHHIFRLVNGDTEQNASS 705
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: D7FH16_ECTSI (Zinc finger family protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH16_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 1.000e-122 Identity = 206/354 (58.19%), Postives = 233/354 (65.82%), Query Frame = 1 Query: 1135 MGFDREHVVRALGECERGESWKEAAISLLLEPQTSMTP--ESRLSGGARHEVAGQGLSGHAA--GGSSACPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNT-CSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQRVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIM 2181 MGFDREHVVRAL EC RGESWKEAAISLLLEPQ S E LSG R A AA S CP+C DI+AGEVFTVDCK+QH FCV CLH HC VQLLD+ LIPACPLS C HEL QEEVERVFLLK+YSS G + + +RRALD C LLT RGL+STGA+PCVSPECGNWMV EGGGQRVKC +CL+EFC CKR+P+HY A CDEVV + R WS WL+EGKA FL AMAAQD +++ALLD+HNR+K A+R+RLEY+RME+WKE RCRCCP CGR +EKLSGCD+M Sbjct: 1 MGFDREHVVRALRECGRGESWKEAAISLLLEPQVSSLAGWEEGLSGTGRQGAAAMQRFADAAPAASQSPCPVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDS-LIPACPLSTMKCGHELGQEEVERVFLLKSYSSASAGGKDGGDTTGVSEEDRRALDTCRNLLTRRGLESTGAIPCVSPECGNWMVPEGGGQRVKCASCLVEFCRRCKRSPYHYAAECDEVVRLSREWSHWLSEGKAAFLGAMAAQDDQHRALLDRHNRKK--------------------------------------XXXXXXXXXAQRVRLEYERMEEWKEQRCRCCPHCGRTIEKLSGCDMM 315
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A4D9D9T2_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9T2_9STRA) HSP 1 Score: 209 bits (533), Expect = 5.410e-54 Identity = 142/414 (34.30%), Postives = 198/414 (47.83%), Query Frame = 1 Query: 1351 IEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSN------TCSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLC---GTLLTC---------------RGLQSTGAVPCVSPECGNWMV----LEGGGQRVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKT-TPFTEQQPEVAARSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMACRDPKHAHHIYQLING 2505 + A + +DCK H F L+ L+D LIPACPL+N C++ L+Q+EVE V N A ++ R L LC G L+ +G + G + C + C W+ LE QRV C CL+ FC CKR P+H+ +CDEV+ I + W W G+A +L MA +D Y+A LD R+ H V+EV+ Q + L L A+ E++K SRC+ CP C RV+E++ GCD MVCG +AHGGN+QNGCG F W+ A Y D GE+++ PF E P AR H I +G P++CD C ++GPL C++CPSF+CC+ CQ+ R H +Y G Sbjct: 230 VPASLAYRLDCKCAHAFSTETLYGCIKAALID-DLIPACPLANHPDAPQRCNYLLTQKEVEHVL-------------NRHAPPSQLPAQDRKL-LCFRRGRLVDGGLGWVSERVTEAFLRKGKIAAGCIECPNGRCSYWVEPTRPLEK--QRVDCPKCLMAFCSLCKR-PYHFRCSCDEVMTITKQWLEWQQHGRAPYLTKMAREDSSYQAALDVFKSRRAAH---VQEVRTAE-----------------QNWGL---------LVAD---------ENYKASRCKRCPHCNRVIERVDGCDTMVCGQNAHGGNIQNGCGQAFDWNDALLYVADIGEKRSIVPFQEVPPAEIARVEHQIMDGTPVKCDVCSAKIMGPLAMCINCPSFSCCIRCQNKHTRG--HVLRLYMYGTG 585
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A0L0D5A8_THETB (RING-type domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5A8_THETB) HSP 1 Score: 209 bits (531), Expect = 3.250e-53 Identity = 125/401 (31.17%), Postives = 187/401 (46.63%), Query Frame = 1 Query: 1330 CPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNTCSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQST-GAVPCVSPECGNWMV--LEGGGQRVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGE--RKTTPFTEQQPEVAARSRHFIAEG-----IPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMACRDPK-HAHHIYQLI 2499 C +C C+ E +++TVDC H FC C+ R + + + CP C+H +S+ EV ++T G+ L T R + S GA+PC + +C + + + G +RV C C FC CK +HY C +V RAW W+T G+ +L +AA D EY+ + + N ++ H +EV+ + +RLR E + E+WK + CRCCP CGRV+ +++GC MVCG + HGG+ Q+GCG F W AP Y R T F + PE + R+ H + G + LRCD C +D+ GP FRC+ CP+FA CL CQ +A + H H++ +I Sbjct: 315 CELCFCEFEVSQMYTVDCAASHRFCFECIGRMVEMNIRE-NTEAVCP-GGECNHVMSEIEV-----MQTVGEGE------------------LLTKFRTQQLTRAITSIPGAIPCPTADCTGYEIASMPGEKERVTCSVCRAVFCSLCKNQ-YHYKYECGQVQQAERAWLEWVTSGRRAYLDQLAAADAEYEERISEFNEAREAHQ---REVEAAL----------------------------------QRLR-ENENDEEWKAANCRCCPSCGRVINRVAGCSSMVCGRNYHGGDNQDGCGASFNWETAPAYVPATSSHIRVDTEFGTEAPEHSIRTEHILFAGTDGTAVRLRCDLCQQDIFGPEFRCIACPAFAVCLRCQPLAIDEGSPHRTHVFDII 651
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A7S1F1J6_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F1J6_NOCSC) HSP 1 Score: 197 bits (500), Expect = 2.010e-49 Identity = 126/403 (31.27%), Postives = 181/403 (44.91%), Query Frame = 1 Query: 1330 CPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNTCSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLE----GGGQRVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTPFTEQQPEVAA-----RSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQD----MACRDPKHAHHIYQLI 2499 C IC D + + H+FC CL +H +L D G++PACPLS+ C+H S +V V GNG +E +N R AL + LQ+ A PC + C +W++ G Q ++C C FC +C+R PFH+ +C +V + W WL G+ +L+ +QD Y+ +L+ + +K + ++E AE R E + ME WK +C+CCP+C RV+EKLSGCD+M CG + HG +VQNGCG F WS+AP Y P T P R I G+ LRC C V GPLF C+ C + CL C + A R K H++ ++ Sbjct: 241 CAICFDDAPP-DTTPLCSSPSHIFCQECLWQHVRTELEDKGVLPACPLSSECNHLYSSAQVRAVL---------GNGDASEVLRN-----RFAL-----IEQRARLQAMAAFPCAT--CEDWLIPHPQSAGPQQFIECPGCKTRFCSACRRRPFHFRVSCSDVARVQAEWHEWLRVGRDLYLERRVSQDPSYRPVLEALHSKKAEQLRMLEE--------------------------------------AEARRSEVEAMEKWKSEKCKCCPRCSRVIEKLSGCDLMRCGANYHGDDVQNGCGHNFKWSQAPAY---------VPATVTTPTACVDASLDRVVWQIERGLFLRCAMCKCAVEGPLFLCIDCDACCACLLCANGQGAAAGRRHKADSHVFAIL 574
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A7S4TBH3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TBH3_9DINO) HSP 1 Score: 174 bits (440), Expect = 6.940e-42 Identity = 163/541 (30.13%), Postives = 229/541 (42.33%), Query Frame = 1 Query: 931 DPRAAGTAA-PLP-PPVGKQQQQRQSSFGVAGSAAPSIDDLFLTSRGAPSSAASASASAEDEAAVVE-LVGMGFDREHVVRALGECERGESWKEAAISLLL---EPQTSMTPESRLSGG--ARHEVAGQGLSGHAAGGSSACPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNTCSHELSQEEV-------ERVFLLKTYSSGDGNGSNA-EAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQR-VKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATF---LKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTPFTEQQPEVAARSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMAC--RDPKHAHHI 2487 +PR A AA PL PP+G Q+R S+ G+A S A +EAAV E L MGF ++ V RA + EAA+ LL E ++ SGG A+ E G G +G A + C IC + EA E + C D H +C C+ RH +D+ P CP C EL +E++ ERV + + SNA +A + A G+ + GL+ V C +P C N +V G +R +CG FC C++AP+H+ A C EV + W W++ G+ + ++A A + + +AL + +R ++ LE D E WK CR CP+C R V+KL GCD MVCG DAHGGN Q GCG F W+ AP Y+ R E + P + F A C+ ++GP FRCVHC +F+ CL C+ + DP H I Sbjct: 137 EPRGARKAAGPLQLPPLGAPAQRRASAAGLAARXXXXXXXXXXXS-------------AYEEAAVCEQLRHMGFSQDRVRRARATPAGRQGTLEAAVEALLALPEEPPAIAGSEAFSGGRQAQPEEEGAGPAGRAPPAAWECQICFAEQEA-EGWR--CPDGHRYCADCMRRH-----VDSVPFPCCPTPG-CGIELEEEDLLVLGVATERVDAFR-----EARLSNAVDALGSCAGGTASAGPAAGSSSSGAGLEVV--VRCPNPGCRNAVVAAAGERRRYRCGCGTEPFCTLCRQAPYHFQAECSEVQPLRERWLEWISGGRDEYHGRVRASADSEAQVRALREALSRHEE---------------------------------------------------LEAD--EQWKAKHCRLCPQCRRPVQKLEGCDSMVCGSDAHGGNDQPGCGHAFSWTAAPAYRA-RVESRELPRVSGEETRCRGKGAFHAFADCGLCEDGGHGILGPRFRCVHCENFSVCLACEPLLAVLHDPGHVFQI 594
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A7S4TB23_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TB23_9DINO) HSP 1 Score: 169 bits (427), Expect = 2.650e-39 Identity = 157/536 (29.29%), Postives = 220/536 (41.04%), Query Frame = 1 Query: 931 DPRAAGTAA-PLP-PPVGKQQQQRQSSFGVAGSAAPSIDDLFLTSRGAPSSAASASASAEDEAAVVE-LVGMGFDREHVVRALGECERGESWKEAAISLLL---EPQTSMTPESRLSGG--ARHEVAGQGLSGHAAGGSSACPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNTCSHELSQEE--VERVFLLKTYSSGDGNGSNA-EAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQR-VKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATF---LKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTPFTEQQPEVAARSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMAC--RDPKHAHHI 2487 +PR A AA PL PP+G Q+R S+ G+A S A +EAAV E L MGF ++ V A + EAA+ LL E ++ SGG A+ E G G +G + CPIC + +A E + C D H +C C+ RH +D+ P CP C EL +E+ V V + + D SNA +A + V C +P C N +V G +R +CG FC C++AP+H+ A C EV + W W++ G+ + ++A A + + +AL + +R ++ LE D E WK CR CP+C R V+KL GCD MVCG DAHGGN Q GCG F W+ AP Y+ R E + P + F A C+ ++GP FRCVHC +F+ CL C+ + DP H I Sbjct: 137 EPRGARKAAGPLQLPPLGAPAQRRASAAGLAARXXXXXXXXXXXS-------------AYEEAAVCEQLRHMGFSQDRVRHARATPAGRQGTLEAAVEALLALPEEPPAIAGSEAFSGGRQAQPEAEGAGPAGRGLPATWECPICFAEQDA-EGWR--CPDGHRYCADCMRRH-----VDSVPFPCCPTPG-CGIELEEEDLLVLGVAAERVEAFRDARLSNAVDALGSGAGGXXXXXXXXXXXXXXXXXXLEVVVRCPNPGCRNAVVAAAGERRRYRCGCGTEPFCTLCRQAPYHFQAECSEVQPLRERWLEWISGGRDEYHGRVRASADSEAQVRALREALSRHEE---------------------------------------------------LEAD--EQWKAKHCRLCPQCRRPVQKLEGCDSMVCGSDAHGGNDQPGCGHAFSWTAAPAYRA-RVESRELPRVSGEETRCRGKGAFHAFADCGLCEDGGHGILGPRFRCVHCENFSVCLACEPLLAVLHDPGHVFQI 596
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A6A6RB37_9PEZI (Uncharacterized protein n=2 Tax=Mytilinidiaceae TaxID=281242 RepID=A0A6A6RB37_9PEZI) HSP 1 Score: 158 bits (400), Expect = 3.660e-38 Identity = 123/399 (30.83%), Postives = 174/399 (43.61%), Query Frame = 1 Query: 1330 CPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGL----IPACPLSNTCSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQ--RVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRMEDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTP-FTEQQPEVAARS--RHFIAEGIPLRCDRC-HRDVVGPLFRCVHCPSFACCLECQDMACR-DPKHAHHIYQ 2493 C IC+ D + + DC H FC R CS +++ + +P CP C HELS++E++++ EQ LD T+L R L S G P + +C + M G+ RV+C C FC C +HY TC E+ W+AWL +G+ + +A Q+ R+KQQ++ KE + +L +LQQ E +K R CP CGRVVEK++GCD M CG DAHGGNVQ+GCG F W+ AP Y+ T F Q P+ A RH A RCD C ++VG F C++CPS+ C +C+ R D +H I++ Sbjct: 76 CGICMDDKPRTDSYVFDCLTSHTFC-----RDCSREVVRGDIAGSKVPKCP-GERCKHELSEQEMKQLLP-------------------EQ------LDKYSTMLLNR-LVSQG--PFLVCKCKHVMAAHSAGEQERVECPKCQYTFCSLCNE-DYHYRCTCQELKQYRNIWTAWLRKGRNDYQSTVAQQE----------RRQKQQYEKQTKEFVAAQKKHEEDRATALRAFETLQQD------------------------EQYKARSARMCPHCGRVVEKITGCDAMTCGQDAHGGNVQSGCGRGFTWTSAPMYRAAAVNTPTIEAFVAQAPQQAGTQGFRHEYA-----RCDNCGSEEIVGLKFECLNCPSYDLCGKCERNGTRHDQRHVFRIWK 400
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A813YUI2_9BILA (RBR-type E3 ubiquitin transferase n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A813YUI2_9BILA) HSP 1 Score: 160 bits (406), Expect = 7.570e-37 Identity = 109/403 (27.05%), Postives = 169/403 (41.94%), Query Frame = 1 Query: 1330 CPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNTCSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQ---RVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRM---EDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTPFTEQQPEVAARSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMACRDPKHAH-------HIYQLI 2499 C +C+ +++ DC D H C +C + C ++ + G I C L C++ L + E+ ++ + SN E K ++ D + ++ G + C + C W+ RV C C EFC C + +HY TC ++ I + W W + +L A QD Y L +NR+ +++ ++ LR YD + E +K CR CP+C RVV++L GCD MVCG DAHGGN+Q+GCG KF W++A Y TP +Q + + + ++CD C DVVG F CVHCPS C +C+ A D + H+++LI Sbjct: 419 CDVCMESCPYDDIYVFDCSDNHKLCYSCYYESCKTKM-NNGEILTCAL---CTNPLREGELNQLRI-----------SNDELKKIRDYQIKKTFDAYSS-------RTRGIIKCPNQNC-LWIAEAADPNERFRVTCPICNKEFCSLCNQQ-YHYRTTCQQLPQITQRWFFWCQTERGRYLTMRAQQDTAYATQLSDYNRQNNENENRNRD-----------------------------------------LRRRYDELMNDEKYKADNCRLCPQCKRVVQRLEGCDSMVCGQDAHGGNLQSGCGAKFNWTQAQQYNA-----AATPQPKQVILDLPKPENPVVHHNGVKCDHCQNDVVGIRFDCVHCPSLTYCEKCEQQATLDHSRENQFLQQQQHVFKLI 751
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Match: A0A813U5D0_9BILA (RBR-type E3 ubiquitin transferase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A813U5D0_9BILA) HSP 1 Score: 161 bits (408), Expect = 1.470e-36 Identity = 109/403 (27.05%), Postives = 169/403 (41.94%), Query Frame = 1 Query: 1330 CPICLCDIEAGEVFTVDCKDQHLFCVTCLHRHCSVQLLDAGLIPACPLSNTCSHELSQEEVERVFLLKTYSSGDGNGSNAEAAKNEQDNNRRALDLCGTLLTCRGLQSTGAVPCVSPECGNWMVLEGGGQ---RVKCGACLIEFCGSCKRAPFHYTATCDEVVAIGRAWSAWLTEGKATFLKAMAAQDGEYKALLDQHNRRKQQHDLAVKEVKPTIRAQASQLFCSLSLSLSLQQYSLVPFALPIPMLQAERLRLEYDRM---EDWKESRCRCCPKCGRVVEKLSGCDIMVCGVDAHGGNVQNGCGVKFMWSRAPPYKGDRGERKTTPFTEQQPEVAARSRHFIAEGIPLRCDRCHRDVVGPLFRCVHCPSFACCLECQDMACRDPKHAH-------HIYQLI 2499 C +C+ +++ DC D H C +C + C ++ + G I C L C++ L + E+ ++ + SN E K ++ D + ++ G + C + C W+ RV C C EFC C + +HY TC ++ I + W W + +L A QD Y L +NR+ +++ ++ LR YD + E +K CR CP+C RVV++L GCD MVCG DAHGGN+Q+GCG KF W++A Y TP +Q + + + ++CD C DVVG F CVHCPS C +C+ A D + H+++LI Sbjct: 767 CDVCMESCPYDDIYVFDCSDNHKLCYSCYYESCKTKM-NNGEILTCAL---CTNPLREGELNQLRI-----------SNDELKKIRDYQIKKTFDAYSS-------RTRGIIKCPNQNC-LWIAEAADPNERFRVTCPICNKEFCSLCNQQ-YHYRTTCQQLPQITQRWFFWCQTERGRYLTMRAQQDAAYATQLSDYNRQNNENENRNRD-----------------------------------------LRRRYDELMNDEKYKADNCRLCPQCKRVVQRLEGCDSMVCGQDAHGGNLQSGCGAKFNWAQAQQYNA-----AATPQPKQVILDLPKPENPVVHHNGVKCDHCQNDVVGIRFDCVHCPSLTYCEKCEQQATLDHSRENQFLQQQQHVFKLI 1099 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.790.1 >prot_C-linearis_contig102.790.1 ID=prot_C-linearis_contig102.790.1|Name=mRNA_C-linearis_contig102.790.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=856bp MSDHEGFEMLDETFGVRSESDSSAPNSPQPTSFSPEKLQPQQGDAGSPSNback to top mRNA from alignment at C-linearis_contig102:399332..404911- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig102.790.1 ID=mRNA_C-linearis_contig102.790.1|Name=mRNA_C-linearis_contig102.790.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5580bp|location=Sequence derived from alignment at C-linearis_contig102:399332..404911- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig102:399332..404911- >mRNA_C-linearis_contig102.790.1 ID=mRNA_C-linearis_contig102.790.1|Name=mRNA_C-linearis_contig102.790.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5136bp|location=Sequence derived from alignment at C-linearis_contig102:399332..404911- (Chordaria linearis ClinC8C monoicous)back to top |