mRNA_C-linearis_contig102.783.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A6H5JEV1_9PHAE (Nocturnin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV1_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 1.930e-187 Identity = 295/468 (63.03%), Postives = 342/468 (73.08%), Query Frame = 1 Query: 184 MEMPGGGKAGDNNRI-PQATG------IHSQSVLQREVRAAVDNLNWPPLASRGWAPIPAI---PSDEGGVEGV--------EGGKKLKILSWNILCDGLSGAHPTRGDFLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHLEDGCSFFYRATAPITAATATSAGEGRASDE--RETGTATTTLELLDAHTFTMAVVEG-DDSAEDGEGAGDDG------KDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAG-GETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGHEQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALPNGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSSGLKPVSGSTLPSAEELGPTRAPSFVYPSDHFAIAVDLRIP 1503 M+M G K GD P+A G + SQ+VLQREV AAVD LNWPPLA RGWAP+ A+ PS GG G E GK LKIL+WN+LCDGLSGAHP RG F+ AP+GSLDW KRRW++LEEI++WDCDVLVLQEVDHHHDWLSPMLAK+GYRSLFVKKP+APG+ FNPHLEDGCS FYRATA T +AG+ A + TT L+LLDAH+F++AVVE DD+A D G + D+ PAEPV GNQVA+ISLL VSS G G G E LVIV+TTHLKA K+ HGE IR+RQAKQLLDEVARFRAG E+ARGLP+GS+P+I+AGDFNATP + GGYEPLCY Q+T+HPLALRSALP G+D FTTWK+R A G +ES+HCIDY+W+S GL+PV GSTLPSAE LG RAPSF YPSDHFAIAVDLR+P Sbjct: 1 MDMRGDCKHGDGTEEQPRAGGGRLQGGVRSQNVLQREVSAAVDGLNWPPLAPRGWAPLRALAAFPSPAGGDAGXXXXXXXXXERGKTLKILTWNVLCDGLSGAHPERGGFVYAPEGSLDWEKRRWRLLEEILRWDCDVLVLQEVDHHHDWLSPMLAKQGYRSLFVKKPLAPGMAFNPHLEDGCSLFYRATAATT-----TAGDNAADSVPGKRGAEITTKLDLLDAHSFSLAVVETEDDTAGDNSGXXXXXXXXXXXRTDKADPPAEPVVGNQVALISLLGVSSP-GRGGEGRGEDEALVIVTTTHLKAKKDGHGELIRSRQAKQLLDEVARFRAGQEKARGLPAGSVPVIIAGDFNATPHASGGYEPLCYGQITSHPLALRSALPLGDDLFTTWKVR---------AAGGGGVKESRHCIDYVWLSEGLRPVEGSTLPSAEGLGLERAPSFAYPSDHFAIAVDLRLP 453
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: D7FH22_ECTSI (Nocturnin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH22_ECTSI) HSP 1 Score: 307 bits (787), Expect = 5.910e-95 Identity = 167/264 (63.26%), Postives = 191/264 (72.35%), Query Frame = 1 Query: 499 RWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHLEDGCSFFYRATAPITAATATSAGEGRASDERETGTATTT-LELLDAHTFTMAVVEGDDSAEDGEGAGDDGKD--------DQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVS----TTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGHEQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSA 1251 RWK+LEEI++WDCDVLVLQEVDHHHDWLSPMLAK+GYRSLFVKKP+APG+ FNPHLEDGCS FYRA A AT T+ + S + G TT L+LLDAH+F++AVVE +D AGD D+ PAEPV GNQVA+ISLL VSS G TTHLKA K+ HGE IR+RQAKQLLDEVARFRAG E+ARGLP+GS+P+I+AGDFNATP + GGYEPLCYRQVTAHPLALRSA Sbjct: 11 RWKLLEEILRWDCDVLVLQEVDHHHDWLSPMLAKQGYRSLFVKKPLAPGMAFNPHLEDGCSLFYRAAA----ATTTAGDDAADSVPGKRGAETTAKLDLLDAHSFSLAVVETEDDT-----AGDXXXXXXXXXXXTDKAGPPAEPVVGNQVALISLLGVSSPGGXXXXXXXXXXXXXXXXXXXTTHLKAKKDGHGELIRSRQAKQLLDEVARFRAGQEKARGLPAGSVPVIIAGDFNATPHASGGYEPLCYRQVTAHPLALRSA 265
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A835YLL9_9STRA (Nocturnin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL9_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.090e-78 Identity = 149/374 (39.84%), Postives = 211/374 (56.42%), Query Frame = 1 Query: 400 LSWNILCDGLSGAHPTRGDFLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHLEDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSS----SVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGHEQARGLPSG-SIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALP-NGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDY-MWVSSGLKPVSGSTLPSAEELGPTRAPSFVYPSDHFAIAVDLRI 1500 L +LCD LSGA P G F+++P SL W R+W+ILEEI+++D D++ L EVDH+ DW++PMLA GYR FVKKP +P + + LEDGC+ YRA +E+L++H+ A+ + G + NQVAI++LLR+ + + G DG +GG +++TTHLKA K+A GE +R +QA+QLL EV +FR GL S ++P+IV GD NATP + Y LCY +++ L LRSA P G+D FTTWKIRP K G RE++H IDY ++ G + V+ +P+A+E G +R PSF+YPSDHF++ VD +I Sbjct: 24 LRAQVLCDALSGASPDLGGFVRSPPESLRWSSRKWRILEEILRFDADIITLCEVDHYDDWVAPMLATVGYRGCFVKKPASPTLQYGD-LEDGCAILYRADK---------------------------VEVLNSHSLVYAIAD-------------------TPGAPRKIC-NQVAIMALLRLKTDAEGAAGGDGA-SGGYKHFVLATTHLKADKSAEGEAVRAQQARQLLAEVGKFRDRAAAGLGLASAEALPVIVTGDMNATPHASADYGALCYAELSTSALRLRSAYPLAGDDAFTTWKIRPCKDG-------SGGMRETRHTIDYVLYAGEGCEAVARVAMPTAQECGESRVPSFMYPSDHFSLVVDFKI 341
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A4U5U4X7_COLLU (Nocturnin n=4 Tax=Sciaenidae TaxID=30870 RepID=A0A4U5U4X7_COLLU) HSP 1 Score: 139 bits (350), Expect = 3.250e-32 Identity = 107/354 (30.23%), Postives = 158/354 (44.63%), Query Frame = 1 Query: 457 FLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGH-EQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSA---LPNG---EDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSSGLKPVSGST-LPSAEELGPTRAPSFVYPSDHFAIAVD 1491 F++ P +L W R++ ILEE++ + +L LQEVDH++D P+LA GY S+F KP +P + + DGC+ F+ D+ E LD+ ++ + + NQVA++++LR C + G L V+ THLKA + E +R+ Q LL + H ++A G P+ IPL++ GDFNATP YR+ +A PL+L SA L G E +TTWKIR T E +DY+W S V +P+ E++GP R PSF YPSDH ++ D Sbjct: 106 FVQCPLEALSWSHRKYLILEELLTYRPHILCLQEVDHYYDTFQPVLADLGYSSIFCPKPWSPCLDVEGNNGPDGCALFF--------------------DQSR-------FEFLDSVNIRLSAMR--------------------------IPTNQVAVVAILR---------CRSTGRCLC-VAVTHLKA--RSGWEWLRSAQGSDLLRHLQNLLEKHTDRATGAPTSDIPLLICGDFNATPTEE------VYRRFSASPLSLDSAYKKLSQGGLTEPEYTTWKIR--------------TTGECCTTLDYIWYSQDTLRVDAVLDMPTEEQIGPNRLPSFSYPSDHLSLVCD 374
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A3Q3L7L3_9TELE (Nocturnin n=2 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3L7L3_9TELE) HSP 1 Score: 136 bits (342), Expect = 4.520e-31 Identity = 109/376 (28.99%), Postives = 159/376 (42.29%), Query Frame = 1 Query: 391 LKILSWNILCDGLSGAHPTRGDFLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGH-EQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALPN------GEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSSGLKPVSGST-LPSAEELGPTRAPSFVYPSDHFAIAVD 1491 ++++ WNIL L + F++ P +L+W +R++ ILEEI+ + +L LQEVDH++D P+LA GY S F KP +P + + DGC+ F+ D+ ELLD+ ++ + + NQVA++ +LR C G V V+ THLKA + E +R+ Q LL + H A G IPL++ GDFNA P YR+ PL L SA E +TTWKIRP T E +DY+W S + V +P+ E++GP R PSF Y SDH ++ D Sbjct: 97 IRVMQWNILAQALGEGLDS---FVQCPLEALNWSRRKYLILEEILAYRPHILCLQEVDHYYDTFQPVLAGLGYSSNFCPKPWSPCLDVEGNNGPDGCALFF--------------------DQSR-------FELLDSMNIRLSAM--------------------------MIPTNQVAVVMMLRC--------CSTG--KCVCVAVTHLKA--RSGWEWLRSAQGSDLLRHLQNVVQKHCGGAAGETCSDIPLLICGDFNAIPTEE------VYRRFITSPLGLDSAYKKLSQDGLKEPEYTTWKIRP--------------TGECCTTLDYIWYSQDMLRVDAVLDMPTEEQIGPNRLPSFSYASDHLSLVCD 384
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A672GXP3_SALFA (Nocturnin n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GXP3_SALFA) HSP 1 Score: 133 bits (334), Expect = 1.480e-29 Identity = 115/402 (28.61%), Postives = 168/402 (41.79%), Query Frame = 1 Query: 391 LKILSWNILCDGLSGAHPTRGDFLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARF--RAG-----------------------HEQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALP------NGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSS-GLKPVSGSTLPSAEELGPTRAPSFVYPSDHFAIAVDLR 1497 ++++ WNIL L + F++ P +L+W +R++ ILEEI+ + DVL LQEVDH++D P+++ GY+ F+ KP +P + + DGC+ FYR + AT AH A++ + NQVAI+ L C G L V+ THLKA + E +R+ Q LL + R G E+ GL +PL+V GDFNA P YR+ ++ PL L SA E +TTWKIRP+ +S G +DY+W S L S +P+ E++GP R PS+ YPSDH ++ DLR Sbjct: 144 IRVMQWNILAQALGEG---KDGFVRCPLDALNWHERKYLILEEILTYRPDVLCLQEVDHYYDTFQPIMSGLGYQGSFLAKPWSPCLDVERNNGPDGCALFYRRSRFSLQAT--------------------------AHLRLSAMM---------------------------LPTNQVAIVQTL---------SCRVTGRRLC-VAVTHLKA--RSGWERLRSAQGADLLQRLRSITSRGGGGRQDLDQXXXXXXXXXXXXXXXQEERPGL----LPLVVCGDFNAEPSED------VYRRFSSSPLGLDSAYKLLSRDGQTEPAYTTWKIRPSGESRGT--------------LDYIWYSQEALSVDSLLDIPTEEQIGPDRLPSYHYPSDHLSLLCDLR 453
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: UPI0018EB4E81 (nocturnin-like n=3 Tax=Micropterus TaxID=27705 RepID=UPI0018EB4E81) HSP 1 Score: 132 bits (331), Expect = 3.530e-29 Identity = 105/357 (29.41%), Postives = 159/357 (44.54%), Query Frame = 1 Query: 457 FLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAG---HEQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALP------NGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVS-SGLKPVSGSTLPSAEELGPTRAPSFVYPSDHFAIAVDL 1494 F++ P +L+W +R++ ILEEI+ + D+L LQEVDH++D P++A GY F+ KP +P + + DGC+ FYR + AT +H AV+ + NQVAI+ L C G L V+ THLKA + E +R+ Q LL + +G + Q++ + SG+IPL+V GDFNA P Y++ ++ PL L SA E +TTWKIRP+ ES +DY+W + L+ +P+ E++GP R PS+ YPSDH ++ D+ Sbjct: 174 FIRCPLDALNWQERKYLILEEILTYRPDILCLQEVDHYYDTFQPIMASLGYHGSFLPKPWSPCLDVEQNNGPDGCALFYRRSRFSLQAT--------------------------SHLRLSAVM---------------------------LPTNQVAIVQTLI---------CQVTGRRLC-VAVTHLKA--RSGWERLRSAQGADLLQSLRSITSGGGSNSQSQAV-SGTIPLVVCGDFNAEPSED------VYQRFSSSPLGLNSAYKLLSSDGQREPAYTTWKIRPSG--------------ESCSTLDYIWYTHDALRVECLVDIPTEEQIGPDRLPSYHYPSDHLSLICDI 444
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: UPI001445AF26 (nocturnin isoform X1 n=2 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001445AF26) HSP 1 Score: 130 bits (327), Expect = 1.180e-28 Identity = 103/356 (28.93%), Postives = 155/356 (43.54%), Query Frame = 1 Query: 457 FLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGHEQARG--LPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALP------NGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSSGLKPVSGST-LPSAEELGPTRAPSFVYPSDHFAIAVDL 1494 F++ P +L+W +R++ ILEEI+ + D+L LQEVDH+ D P++A GY F+ KP +P + + DGC+ FYR + +T AH A++ + NQVAI+ L C G+ L V+ THLKA + E +R+ Q LL + + + +R + SG+IPL+V GDFNA P YR+ ++ L L SA E +TTWKIRP+ ES +DY+W + V +P+ E++GP R PS+ YPSDH ++ D+ Sbjct: 175 FIRCPLDALNWEERKYLILEEILTYSPDILCLQEVDHYFDTFQPIMASLGYHGTFLAKPWSPCLDVEQNNGPDGCALFYRRSRFSLQST--------------------------AHLRLSAMM---------------------------LPTNQVAIVQTLN---------CQVTGQKLC-VAVTHLKA--RSGWERLRSAQGADLLQSLRSITSANVSSRQNEVVSGTIPLVVCGDFNAEPSED------VYRRFSSSTLGLNSAYKLLSRDGQTEPAYTTWKIRPSG--------------ESCSTLDYIWYTHDALSVECLLDIPTEEQIGPDRLPSYHYPSDHLSLLCDI 445
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A6J2QI27_COTGO (Nocturnin n=2 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2QI27_COTGO) HSP 1 Score: 129 bits (323), Expect = 2.300e-28 Identity = 103/356 (28.93%), Postives = 154/356 (43.26%), Query Frame = 1 Query: 457 FLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARF--RAGHEQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRSALP------NGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSSGLKPVSGS-TLPSAEELGPTRAPSFVYPSDHFAIAVDL 1494 F++ P +L+W +R++ ILEEI+ + D+L LQEVDH++D P++A GY+ F+ KP +P + + DGC+ FYR+ AT AH A++ + NQVAI+ L C G L V+ THLKA + E +R+ Q LL + + G + SG+IPL+V GDFNA P YR+ ++ L L SA E +T+WKIRP+ ES +DY+W + V +P+ E++GP R PS+ YPSDH ++ D+ Sbjct: 139 FIRCPLDALNWQERKYLILEEILTYRPDILCLQEVDHYYDTFQPIMASLGYQGSFLAKPWSPCLDVEQNNGPDGCALFYRSARFSLQAT--------------------------AHLRLSALM---------------------------LPTNQVAIVQTLN---------CKVTGRRLC-VAVTHLKA--RSGWERLRSAQGADLLQSLCSITSQGGSSCQTEVESGTIPLVVCGDFNAEPSED------VYRRFSSSTLGLNSAYKLLSSDGQTEPAYTSWKIRPSG--------------ESCSTLDYIWYTHDALSVDCLLNIPTEEQIGPDRLPSYHYPSDHLSLLCDV 409
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Match: A0A1Z5KY87_ORNMO (Nocturnin (Fragment) n=3 Tax=Ornithodoros TaxID=6937 RepID=A0A1Z5KY87_ORNMO) HSP 1 Score: 128 bits (321), Expect = 2.300e-28 Identity = 110/380 (28.95%), Postives = 164/380 (43.16%), Query Frame = 1 Query: 379 GGKKLKILSWNILCDGLSGAHPTRGD-FLKAPKGSLDWGKRRWKILEEIIKWDCDVLVLQEVDHHHDWLSPMLAKEGYRSLFVKKPIAPGITFNPHL-EDGCSFFYRATAPITAATATSAGEGRASDERETGTATTTLELLDAHTFTMAVVEGDDSAEDGEGAGDDGKDDQKKGPAEPVAGNQVAIISLLRVSSSVGADGCDAGGETLVIVSTTHLKAVKNAHGETIRTRQAKQLLDEVARFRAGHEQARGLPSGSIPLIVAGDFNATPRSFGGYEPLCYRQVTAHPLALRS--ALPNGEDFFTTWKIRPAKKSPGKGPAVEGATRESKHCIDYMWVSSGLKPVSGST-LPSAEELGPTRAPSFVYPSDHFAIAVDLRIP 1503 G +++L WN+L L+ + D F+ P+ +L+W RRW+ILE+I+ +D D+L LQEVDH++ +LS L + GY +F KP +P + DGC+ FY D+ + +L+ + V A P NQV ++ +L+ S + V TTHLKA + ++R Q K L+ V R G P I+ GD NA P +EP+ ++ L L S A+ E +TTWKIR EG E KH IDY++ S + +PS ++GP R PS YPSDHF++ DL++P Sbjct: 95 GRDSIRVLQWNLLSQALA----EKADRFVCCPEAALNWYWRRWRILEDIVLYDPDILCLQEVDHYN-FLSSTLGRIGYAGVFFPKPDSPCCYVKDNNGPDGCALFY--------------------DQEK-------FQLVMCEKRVLQVF------------------------ASPS--NQVTLLCILQRKSD----------NAQLCVVTTHLKARQGMLLTSLRHEQGKDLVRFVRTHRGGR-----------PTIITGDLNAEP-----WEPVYRTLLSQRDLGLESSYAVNAQEPPYTTWKIR-----------EEG---EVKHTIDYIFFSGQHFTLEARLEMPSEGDIGPGRVPSLAYPSDHFSLVADLKLP 376 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.783.1 >prot_C-linearis_contig102.783.1 ID=prot_C-linearis_contig102.783.1|Name=mRNA_C-linearis_contig102.783.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=496bp MSFLGRVAHFGVLLADSFVLVLLLIPLSLPFSPYSGQQQPASWGGHRRFCback to top mRNA from alignment at C-linearis_contig102:269872..273560+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig102.783.1 ID=mRNA_C-linearis_contig102.783.1|Name=mRNA_C-linearis_contig102.783.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3689bp|location=Sequence derived from alignment at C-linearis_contig102:269872..273560+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig102:269872..273560+ >mRNA_C-linearis_contig102.783.1 ID=mRNA_C-linearis_contig102.783.1|Name=mRNA_C-linearis_contig102.783.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2976bp|location=Sequence derived from alignment at C-linearis_contig102:269872..273560+ (Chordaria linearis ClinC8C monoicous)back to top |