mRNA_C-linearis_contig102.776.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: D7FH30_ECTSI (Alcohol dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH30_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 3.700e-138 Identity = 250/401 (62.34%), Postives = 265/401 (66.08%), Query Frame = 2 Query: 233 TGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEG--------YESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFL-RTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNR------------------GQMKGASRGG-----------------GGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTEYS 1303 TGGSKGIGRSCVESFA+RGARVLFTYCSDA AA V SFQP G VQGR LDQGDFD VRAFAAEVD WR GREI TVVNNAALGS+TV Y GLPPP SSS A + GA G YE+ARRRADEDMA+MRVN+LGPMWVTEALLPMM A + G GR G A P L T +KKTVLFVGSVGGGS +VFPGFR+ADAMSKAAVAY KYFAA++R G A+ G GGVDF+CLCPGATLTDMFR STLDKMEA GPGELERFL ALPQGRLMLPEEVGEAVYW CSSPAATMFHGAVIDASAGLAVRPG LTEY+ Sbjct: 59 TGGSKGIGRSCVESFARRGARVLFTYCSDAKAAETVAASFQPAGLVQGRWLDQGDFDSVRAFAAEVDRWRGGREISTVVNNAALGSSTVSNYCGLPPPVP-SSSRPAAADRDGASGRGLTADDDYEAARRRADEDMALMRVNALGPMWVTEALLPMMVPPPTPARGENEDPVAGAEVTETAA----------AIDGAATANGGGREG-ASAFPCALGSTKKKKTVLFVGSVGGGSHAVFPGFRSADAMSKAAVAYGAKYFAARSRQLRQQQEAGHDATARADDGSSATAAAGDVRAPAPAATAESDFDHPSGGVDFLCLCPGATLTDMFRASTLDKMEASGPGELERFLRALPQGRLMLPEEVGEAVYWFCSSPAATMFHGAVIDASAGLAVRPGTLTEYT 447
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A6H5K7X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X4_9PHAE) HSP 1 Score: 385 bits (990), Expect = 1.010e-125 Identity = 235/400 (58.75%), Postives = 252/400 (63.00%), Query Frame = 2 Query: 233 TGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARR--------RADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFL-RTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMK---------------GASRGG-------------------GGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTEYS 1303 TGGSKGIGRSCVESFA+RGARVLFTYCSDA A V SFQP G VQGRRLDQGDFD VRAFAAEVD WR GREI VVNNAALGS+TV Y GLPPP+ S RADEDMA+MRVN+LGPMWVTEALLPMM A + G GR G A P L T +KKTVLFVGSVGGGS +VFPGFR ADAMSKAAVAY KY AA++R Q++ G+S G GGVDF+CLCPGATLTDM R STLD +EA+GPGELERFL ALPQGRLMLPEEVGEAVYW CSSPAATMFHGAVIDASAGLAVRPG LTEY+ Sbjct: 105 TGGSKGIGRSCVESFARRGARVLFTYCSDAKGAEAVAASFQPAGVVQGRRLDQGDFDSVRAFAAEVDRWRGGREISAVVNNAALGSSTVSNYCGLPPPAPVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADEDMALMRVNALGPMWVTEALLPMMVPRSRPAGENEDPLTGAE-----------------ATETAAAANGGGREG-ASAFPCALGSTKKKKTVLFVGSVGGGSHAVFPGFRYADAMSKAAVAYGAKYMAARSR-QLRQQQDAGRDATARADNGSSAGAXXXXXXXXXXXAESDFDHPSGGVDFLCLCPGATLTDMLRTSTLDAIEARGPGELERFLRALPQGRLMLPEEVGEAVYWFCSSPAATMFHGAVIDASAGLAVRPGALTEYT 485
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A7S0G6R5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6R5_9RHOD) HSP 1 Score: 200 bits (508), Expect = 2.130e-56 Identity = 141/364 (38.74%), Postives = 184/364 (50.55%), Query Frame = 2 Query: 218 LLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREI---GTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVL-FVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297 L VV+TGGS GIG++ VE FA+ G RVLFTY + + F V V RLDQGD + V F AE +W E E+ +VNNAALGSATV +Y G GA +E +D A+MRVNSLGP+WV+ L+P LR E++TV+ FVGSVGGGS +VFP + AAD MSKAAVAY K+ AA N VD C+ PGAT T+MF++STL+++ + + F+ +P+G L+ P V E +++L +SPA+ +FHGAVIDAS GLAVRPG+ TE Sbjct: 34 LNVVITGGSSGIGKAIVEEFAREGHRVLFTYLRNIDGVAALRSKFAHVTAV---RLDQGDENSVSEFVAETKVWLEDSEVPHVDVIVNNAALGSATVDSYCGK-----------------GATEFE-------KDTALMRVNSLGPLWVSRGLIP------------------------------------------------------------LRKQEERTVVVFVGSVGGGSAAVFPEYHAADLMSKAAVAYLSKHLAADNVHS----------NVDIFCISPGATETEMFQKSTLNQLN-----DPDGFIAGMPKGVLISPTHVAENIFYLSTSPASKIFHGAVIDASMGLAVRPGLQTE 295
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: R7QEK9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEK9_CHOCR) HSP 1 Score: 203 bits (517), Expect = 3.980e-56 Identity = 145/371 (39.08%), Postives = 193/371 (52.02%), Query Frame = 2 Query: 209 EAPLLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAY-----GGLPPPSQYSSSAAATGEWSGAEGYESAR---RRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297 EAPL VVVTGGS GIG+S VE FA G RVLFTY S A +E ++ V + +LDQG V FA V W +G + +VNNAALGSATV Y G G A+ ESA RRA +D A+MRVN+LGP+WVT+AL+ + +G GR +++F+GSVGGGS SVFP + AAD MSK+A++Y K+ AAQ+ +D C+ PGAT T+MFRRSTL K+ +++ F++++P+ RL+ PEE+ +AV+WL + +FHGAV+DAS GLAVRPG+ TE Sbjct: 134 EAPLNVVVTGGSTGIGKSIVECFAAAGHRVLFTYLSSVHGADALEAKYKAVTKA---KLDQGSVLSVANFAGVVAEWAKGEGVHVLVNNAALGSATVQKYVDGVGGHSVVDVVMKDMKLCNGGEKKADLPESALGMIRRAAQDEALMRVNALGPLWVTDALMDSIKMAASV-------------------------------------QGRGR----------------SSIVFIGSVGGGSASVFPEYCAADLMSKSALSYLSKHLAAQHVRDS----------IDVCCVAPGATETEMFRRSTLSKVS-----DVDAFVDSMPKRRLIQPEEIADAVFWLATQSPPGIFHGAVLDASMGLAVRPGLQTE 433
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A2V3IE52_9FLOR (Protein FixR n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE52_9FLOR) HSP 1 Score: 176 bits (447), Expect = 5.150e-47 Identity = 132/375 (35.20%), Postives = 182/375 (48.53%), Query Frame = 2 Query: 203 PDEAPLL-VVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYG---------GLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297 P P+L VVVTGGS GIG + V FA+ G RVLFTY + A +++ + V Q LDQ V +F+ VD W + +VNNAALGSATV Y G Q SSA RA D+A+MRVN+LGP+WVT+AL + + R G + T++F+GSVGGGS +VFP + AAD MSKAA+ Y K+ AAQ+ +D +C+ PGAT T+MFR+STL + ++ F++++P+ RL+ P E+ ++V+WL +FHG+V+DAS GLAVRPG+ TE Sbjct: 49 PPRRPVLSVVVTGGSTGIGEAIVTLFAEAGHRVLFTYLTRRGNAERLQSRYPHVTATQ---LDQAQVSSVASFSRTVDDWAGAAGVHILVNNAALGSATVRQYVHQKCQSPNFGKLATEQLPSSAV------------DMLMRAQNDLALMRVNALGPLWVTDAL----------------------------------------------SDSIRRAADVSG---------RATIVFIGSVGGGSAAVFPEYCAADLMSKAALTYFSKHLAAQHVRD----------NIDVMCISPGATETEMFRQSTLATIP-----DVPAFVDSMPKRRLIQPHEIAKSVFWLSVESPQGVFHGSVLDASMGLAVRPGLQTE 338
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A0G4J4J7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4J7_PLABS) HSP 1 Score: 171 bits (433), Expect = 2.100e-45 Identity = 132/365 (36.16%), Postives = 173/365 (47.40%), Query Frame = 2 Query: 203 PDEAPLLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297 P A VVVTGGS GIGRS VE+F RVLFTY A AA ++ + + V R DQGD V A +V W +G+ + +VNNAALGS TV Y L A + GA + +A D A+MRVN+LGP+WV++AL+P+M + P + V+ VGSVGG S +VFP + +D MSKAAVAY ++ AA VD VC+ PGAT TDM R S +K A + L +GRL+ P E+ + +YW+C+ A +FHGAV+DAS GLA RPG+ TE Sbjct: 4 PPGAVKNVVVTGGSSGIGRSIVEAFCGESHRVLFTYLRHAEAAARLVERYPTATAV---RCDQGDLQSVVALHDDVARWLDGQPLDVLVNNAALGSQTVLTYENLRDNDAREHLDAGS---RGAH-IQQLLSKACRDEALMRVNALGPLWVSDALIPLM--------------------------------------------------SGP---------NRAVVVMVGSVGGSSGAVFPEYHPSDLMSKAAVAYLTQHLAADLIRSH----------VDVVCVSPGATDTDMMRASMTNKELA-----MPMTRGMLAKGRLIDPREIADVIYWICTQAQARVFHGAVLDASMGLACRPGLQTE 287
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A0H5REI3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5REI3_9EUKA) HSP 1 Score: 169 bits (429), Expect = 6.230e-45 Identity = 118/360 (32.78%), Postives = 174/360 (48.33%), Query Frame = 2 Query: 218 LLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297 L VV+TGGS GIGRS V+ FA+ G +VLFTY + A A + + DQG+ + + +V W G + ++NNAALGS TV Y + P S + + RA +D A+MRVN+LGP+W+T +++P+M + + +GSVGG S +VFP + AD MSKAA+ Y ++ AAQ+ +D +C+ PGAT+TDMFR+STLDK+ AK ++ F++ P+ RL+ PEE+ A+ +L + + +FHG+VIDAS GL+ RPG+ TE Sbjct: 16 LRVVITGGSSGIGRSVVQEFAEAGHQVLFTYLKNKAGADSLIAKYP--NNTHAVYCDQGNLECISNLYRQVKEWLNGSTLHALINNAALGSETVRTYDNVSPV--LSKPVRKDDDLD----IQDVLGRAWQDEALMRVNALGPLWITNSMIPLMVGP-----------------------------------------------------------SRCVCIMIGSVGGSSCAVFPEYCPADLMSKAALGYLTRHLAAQHIYDH----------IDVLCVSPGATITDMFRKSTLDKIGAK----VDDFIQKFPKRRLIEPEEIAAALLFLTTQSSCRIFHGSVIDASMGLSTRPGIQTE 294
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A2P6N3E0_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N3E0_9EUKA) HSP 1 Score: 164 bits (416), Expect = 3.030e-42 Identity = 129/364 (35.44%), Postives = 182/364 (50.00%), Query Frame = 2 Query: 218 LLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFA----AEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297 L V++ GGS GIG S V+ FA+ G RVL TY S+ A V +++ V LDQGD + + FA +VD+ +VNNAALGSATV Y + Q S T + RR+A ED A+M+VNSLGP+W+T+ + P++ G T P P+ T++++GSVGG S VFP +RA+D MSKAAV Y K+ AA+ Q++ VD CL PGAT+T+MFR+STL+ + + F +P+ RL+ +E+ +A + L + P A +FHGAV+DAS GL +RPG+ TE Sbjct: 89 LNVIIIGGSSGIGVSIVKRFAEAGHRVLSTYYSNMTGALDVHKAYPHAEYVF---LDQGDLESIETFAHGGMQKVDV---------LVNNAALGSATVINY--VNDKLQKSGGDIKT--------ISTLRRKALEDEALMKVNSLGPLWITDVITPLL-------------------------------------------RGPATSETTPTQPVR----NYSTIIYMGSVGG-STGVFPEYRASDLMSKAAVTYLSKHIAAE---QVRSH-------VDVFCLAPGATMTEMFRKSTLETCS-----DPKLFTSMMPKQRLIETKELADATFVLSTEPWARIFHGAVLDASLGLGIRPGLQTE 367
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: UPI00055A680A (SDR family oxidoreductase n=1 Tax=Kitasatospora azatica TaxID=58347 RepID=UPI00055A680A) HSP 1 Score: 157 bits (396), Expect = 1.380e-40 Identity = 123/361 (34.07%), Postives = 167/361 (46.26%), Query Frame = 2 Query: 224 VVVTGGSKGIGRSCVESFAKRGARVLFTYC--SDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTEY 1300 +++TGGS GIGR+CVE FA+ G V FTY ++ AAA E + + G + DQG++ AE+ + +VNNAA+GSATV Y G P Q D AM+R+N+LGP+W++ ALLP + + +G G+ ++ V SVGGG S FPGFR AD MSKAA+ + + AA+ Q V +CPGA T MF STLD + + EL L+ LPQGRL+ P EV E ++WL + PA+ + HGAVIDAS GL V PG+LT + Sbjct: 6 ILITGGSAGIGRACVERFARAGDNVWFTYRLGAERAAAIVAEVNQERPGAARAFAFDQGNWPDQERLLAELP-----GPVHVLVNNAAVGSATVARYAGPHEPEQ--------------------------DEAMLRINALGPLWLSRALLPQL-----------------------------------------IRQGGGK------------------IINVSSVGGGV-SQFPGFRLADGMSKAALCHLTRQLAAELVHQS----------VHVFAICPGAVDTGMFEASTLDPLTPENRAEL---LKRLPQGRLIEPAEVAELIWWL-AGPASGLLHGAVIDASMGLGVHPGLLTGH 261
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A540W882_9ACTN (SDR family oxidoreductase n=2 Tax=Kitasatospora TaxID=2063 RepID=A0A540W882_9ACTN) HSP 1 Score: 152 bits (385), Expect = 5.180e-39 Identity = 120/359 (33.43%), Postives = 168/359 (46.80%), Query Frame = 2 Query: 224 VVVTGGSKGIGRSCVESFAKRGARVLFTYC--SDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLT 1294 V++TGGS GIGR+CVE FA+ G V FTY +D A + + + G V+ DQGD+ + E+ + +VNNAA+GSATV Y G PSQ+ + D AM+R+N+LGP+W+T LLP + +++G G+ ++ V SVGGG S FPGFR AD MSKAA+ + + AA+ + V+ +CPGA T MF STL+ ++ P E + LP+GRL+ P EV E ++WL + P +T+ HGAVIDAS GL V PG+LT Sbjct: 6 VLITGGSAGIGRACVERFAQAGDNVWFTYRLGADRATVLAEKLNAEGPGTVRAFAFDQGDWADHQRLLDELP-----GPVCVLVNNAAVGSATVARYAG---PSQH-----------------------ERDEAMLRINALGPLWLTRKLLPQL-----------------------------------------IEQGCGK------------------IVNVSSVGGGV-SQFPGFRLADGMSKAALGHFTRQLAAELAHEP----------VEVFAICPGAVETGMFEASTLNALD---PVEQAELVHRLPRGRLIDPAEVAELIFWL-AGPDSTLLHGAVIDASMGLGVHPGLLT 259 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.776.1 >prot_C-linearis_contig102.776.1 ID=prot_C-linearis_contig102.776.1|Name=mRNA_C-linearis_contig102.776.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=409bp MEPSRAEGDHEHPSNKPSPHPAPADPATVKASSSATAGNSPDEAPLLVVVback to top mRNA from alignment at C-linearis_contig102:206350..207949+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig102.776.1 ID=mRNA_C-linearis_contig102.776.1|Name=mRNA_C-linearis_contig102.776.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1600bp|location=Sequence derived from alignment at C-linearis_contig102:206350..207949+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig102:206350..207949+ >mRNA_C-linearis_contig102.776.1 ID=mRNA_C-linearis_contig102.776.1|Name=mRNA_C-linearis_contig102.776.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2454bp|location=Sequence derived from alignment at C-linearis_contig102:206350..207949+ (Chordaria linearis ClinC8C monoicous)back to top |