Homology
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI)
HSP 1 Score: 795 bits (2054), Expect = 1.960e-257
Identity = 633/1552 (40.79%), Postives = 771/1552 (49.68%), Query Frame = 3
Query: 138 LRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSLGLTSLLEIQSRCPGKESYAKVVREGQTQFFGPTRLPIRAGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFN----------FKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEF--LQKVINSAFAPCLALLCGRGGADGQGV-RRVRNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDWAAAKNACVAMLLAFLPHFPHAVPSSVLRDLRRAFHKNEGDG--AWRMASSPP--TARRNSTKPTPSLSPSPMRLGMPDVDTYSDVGVGSPPDSCAWMGRDRDSGTISEEGQETIAKEFRAEGLLCRPPASHVGACDSGPSRTAG------------------LPFGTMDAGSPLTGV----------HSNHD-------SPYFIQLDQQP--------------KLALDEEDICED-RAGPHWPD--SAAGSLYVSTYDEPTVAD--NDGVRREDGVLTEKVQESFGYMEGGGW---------------------------------------AAETPGARSHNADQLPPRRPSSLEHDHDPQLANGRERG-----WLRRLPSVAQKIISGEELNQGEFSVADGSITP-SLSSLFAYVFPDDDQHQGWLPGSRESSRS----GVGGGTHSKCSGVVGTDLKSPHIPSSMPPVLP---GGGAEAMMKENNPLVGVTVRRPQSPQFSFMAE-----------------------------------------------NCCSP-DAGISPATSPKPQNPEDGQEREVQGMSCVND---IGAWMS----------GASRHEDDSAQSTRPSGIPFEDDA----------ETSTASTPTIDEAGSVSAEAGRVTGEGVRIPALSRKRKHPDARKAITPRESHCSPSVGYNGASSPSEDGSCFGSRRRRGDRRK---GWWGATEGYKSPAVHNHAVVGASR--------------------------------------------------------------LRAEDLSCG---KRSNTLRKNIEASR--------ATEAGRYEPATAGDIALCETEASKRSTGANGTPTAVVAGDGEMSH--------------------IEGDGRRGGGDSR---------AALAYDQDVLGGEGAAEAGVGDFEPQTVAGVLGN-LRCDDYRTVICRISSAGGAAVHSPLGAGGSRVPKA----ESAAGAR-----PALRGRERPIPQVLQAGHDEIGAGAGAVAVTVTREELVQSFLIGQAGRKFIILRARTGAILCVDQHAADERIKLEELERQVFGEDGDRRNVEVLHLDPPESISITQSDASLLQLHQEVLSSWKFEFVVEQAQ-GISGCAPTATLVSVPVVCGVRLSVQDLVSFLTYLRESMEPGSLAGK--PPQIQHILNYKACHGAIR 3857
LR ++SNS+DAGATSVE+K+DL YR+++ DNGRGIPAE L+SL AT +ASSKA+S E+Q ASTYGFRGEALYSL LTSLLEIQSRC GKE +AKVVREG+ FGP+R P+RAGTIVTLRDAFFKWPVRRKAANE E+ IK+ VSRMAL+NN+VAITV DSAKSK+V++A ATGS T+TFAQ+F+SDKLSL RK++ + L I SS+ + F Y + +R + F L +N+AFAPC+ALL GRGGADGQGV RRVRNPNASSGQ+QELFPVFVLNLECPR EVD+M + EKT VEFSDWAAA+NAC++MLLAFL F HAVPSSVLRDLRRAFHKNEG G AW+ AS P AR S P M+LG PDV S GVGSP +SCAWMGRDR+ G I EE E + FR EG+L PAS GA D+GPS ++ LP + A SP H +D SPYF + +LAL E E+ R W SA G+ Y P+ A +G+ ED L+++ + S G+ + A G H++ R S G RG WLR +P V + ++L+QG+ + D + SLS LF Y F D D + LP E + + GV GG + SS P +LP G VGVTVRRP SPQF+FM E C+P + A + P + G SC D GAW + G++R S+ S + ET +S D GS S GR+ G R+ R R P + SP +G G R G R GWWG ++ P+ A L+A++ G S T R R A++AG P D C + A G + G+ + + +EG G RGG S AALAYDQDVLGG+G G + EP TV GVLG L DY + C +S AGGAAV+SP G GG R KA E AA + P RER IPQVLQAG DE+GAGAGAVAVTVT EEL ++ LIGQAGRKFI+LRA+TGA+LC+DQHAADER+KLEELERQVFGE +RRNVE L LDPPE +SIT+SDA LL+ H+EVLSSW+FE V+QAQ G G P TL +VP+VCGVRLSVQD V FL +LRES+EPG A + PPQ+QHILNYKACH AIR
Sbjct: 40 LRAVVSNSIDAGATSVEVKVDLPSYRITVVDNGRGIPAETLRSLTATERASSKANSAVEMQHASTYGFRGEALYSLALTSLLEIQSRCAGKEPHAKVVREGEVLHFGPSRAPVRAGTIVTLRDAFFKWPVRRKAANEVTEMTRIKDCVSRMALVNNSVAITVRDSAKSKVVVRATATGSATRTFAQVFSSDKLSLARKVQIPVCVTSSAVHPLWRIHLPFCICSIGSSSGMVAFPFSTRY-DTSQLRCVPFMVLLLAVNAAFAPCMALLAGRGGADGQGVVRRVRNPNASSGQRQELFPVFVLNLECPRSEVDIMSDPEKTWVEFSDWAAARNACISMLLAFLSRFSHAVPSSVLRDLRRAFHKNEGGGGDAWKPASPPXXXAARGASPDPGXXXXXXXMQLGTPDVGV-SPAGVGSPLESCAWMGRDREVGGIGEEAMEFQDQGFRGEGVLYPSPASRFGARDTGPSSSSSSRMPGLSFSAGGGVGDDNLPGSSSAAVSPYFAASFEDDGKSRYHEGYDDDGHPTSSPYFARCHHYDVRRRSPPDNRLRGRQLALGEYTGGEEERRRRRWDPRPSALGAEAAPPYPAPSFAAVRYEGLGIEDKALSDQARGSGGHADSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEISCSAKAHRGNGRHSSRSDGQRWQSGXXXXXXXXSIAGSTRGSRRGGWLRHVPGVTEMRPGEKDLDQGQQQLEDDAADRGSLSRLFDYAFADSDGRR--LPTGPERTGALDEWGVRGG-----------------VRSSSPRLLPRSEGXXXXXXXXGRKAFVGVTVRRPPSPQFAFMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTCNPVNQQQVGARTRSPARATTSPHQSSGGFSCQGDGDTPGAWGAAPAFGGTAPLGSARRMASSSSSPKTXXXXXXXXXXXXXXXXXXPETPGSSWGGADRRGSPST--GRLAGH--RMEDAERHRSPPPPASDRWWGVVNNSPGGEGDGDXXXXXXDGWLGWTRGHGRARNSGGGWWGRSQDDTPPSAAGDRATPAXXXXXXXXXXXXAEAPAKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVARLLQADNDGLGWHDDASPTPRGGTNEPRHHPEHVGAASQAG--VPPRRRDERFCAADGESLGLSAQGEAAETMPGEASVYNKESDQTVRPAPAGRQQNACRVEGGGGRGGARSSKEDRMRAAGAALAYDQDVLGGDGLGGDGEEEEEPDTVDGVLGKFLATGDYDS--CHVSDAGGAAVYSPQGPGGDRARKAGGEAEKAAPEKDSRYNPLPGRRERQIPQVLQAGQDEVGAGAGAVAVTVTPEELSEALLIGQAGRKFILLRAKTGAVLCLDQHAADERVKLEELERQVFGEGRERRNVERLLLDPPEKLSITRSDAELLEEHREVLSSWQFEVRVDQAQQGGDGLTPVVTLTAVPMVCGVRLSVQDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYKACHSAIR 1562
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
A0A6H5JWV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV7_9PHAE)
HSP 1 Score: 494 bits (1273), Expect = 4.890e-147
Identity = 367/857 (42.82%), Postives = 433/857 (50.53%), Query Frame = 3
Query: 174 ATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSLGLTSLLEIQSRCPGKESYAKVVREGQTQFFGPTRLPIRAGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRK-----------------------------------------LKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGADGQGVRRVRNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDWAAAKNACVAMLLAFLPHFPHAVPSSVLRDLRRAFHKNEGDG--AWRMASSPP--TARRNSTKPTPSLSPSPMRLGMPDVDTYSDVGVGSPPDSCAWMGRDRDSGTISEEGQETIAKEFRAEGLLCRPPASHVGACDSGPS----RTAGLPF------------GTMDAGSPLTGV----------HSNHD-------SPYFIQLDQQP-------------KLALDEEDICED-RAGPHWPD--SAAGSLYVSTYDEPTVAD--NDGVRREDGVLTEKVQESFGYME--GGGWAAETPGARSHNADQLPPRRPSSLEHDHDP------------------------------------------QLANGRERGWLRRLPSVAQKIISGEELNQGEFSVA-DGSITPSLSSLFAYVFPDDDQHQGWLPGSRESSRS----GVGGGTHSKCSGVVGTDLKSPHIPSSMPPVLP-----GGGAEAMMKENNPLVGVTVRRPQSPQFSFMAENCCSP 2294
ATSV++K+DL YR+++ DNGRGIPAE L+SL AT +ASSKA+S E+Q ASTYGFRGEALYSL LTSLLEIQSR GKE +AKVVREG+ FGP+R P RAGTIVTLRDAFFKWPVRRKAANE E+ IK+ VSRMAL+NN+VAITV DSAKSK V++A ATGS T+TFAQ+F+SDKLSL RK L FNFKQFR+TG++SPPSS+ACHWSKEFQ ELFPVFVLNLECPR EVD+M + EKT +EFSDWAAA+NAC++MLLAFL FPHAVPSSVLRDLRRAFHKNEG G AW+ AS P AR S P M+LG PDV S G GSP +SCAWMGRDR+ G I G E + + R EG+L PAS GA D+GPS R GL F G+ A SP H +D SPYF + +LAL E E+ R W SA G+ + Y P+ A +G+ ED L ++ + S G+ + GGGWAAE P +D LP R GWLR L V + E+L QG+ + D + SLS LF Y F D D G LP E + + GV GG + SS P +LP GGG A K VGVTVRRP SPQF+FM E SP
Sbjct: 3 ATSVQVKVDLPSYRITVVDNGRGIPAETLRSLTATERASSKANSAVEMQHASTYGFRGEALYSLALTSLLEIQSRYAGKEPHAKVVREGEVLHFGPSRAPARAGTIVTLRDAFFKWPVRRKAANEVTEMTRIKDCVSRMALVNNSVAITVQDSAKSKEVVRATATGSATRTFAQVFSSDKLSLARKVEFSVCVTSKAANPRWWIHLPFCICSIGSRSGMVGFSIFHALAFNFKQFRITGYLSPPSSTACHWSKEFQ-------------------------------------------------------ELFPVFVLNLECPRSEVDIMSDPEKTWIEFSDWAAARNACISMLLAFLSRFPHAVPSSVLRDLRRAFHKNEGGGGDAWKPASPPXXXAARGASPDPXXXXXXXXMQLGTPDVGV-SPAGAGSPLESCAWMGRDREVGGI---GVEAMDEGSRGEGVLYPSPASRFGARDTGPSSSSWRMPGLSFIPGGGIGDDNVPGSSVAVSPYFAASFEDDGKSRYHEGYDDDGHPTSSPYFARCHHYDGRRSPPDKRLRGRQLALGEYTGGEEERRRRMWDPRPSALGAEAGAPYPPPSFAAVRYEGLGIEDNALRDQTRGSRGHADSSGGGWAAEGPPGGIGTSDFLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSTRGSRRGGWLRHLQGVTEMRPGEEDLVQGQQQLENDAADQGSLSRLFDYAFADSD---GRLPTGPERTGALDEWGVRGG-----------------VRSSSPRLLPRGEGGGGGTVAGRKA---FVGVTVRRPPSPQFAFMNEERSSP 777
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
A0A2R6XQ32_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XQ32_MARPO)
HSP 1 Score: 192 bits (487), Expect = 1.460e-45
Identity = 323/1381 (23.39%), Postives = 543/1381 (39.32%), Query Frame = 3
Query: 57 MAEVERIDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQA-STYGFRGEALYSLGLTSLLEIQSRCPGK-ESYAKVVREGQTQFFGPTRLPIRAGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVIN----SAFAPCLALLCGRGGADGQGVRRVRNPNASSG-QKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDWAAAKNACVAMLLAF------------LPHFPHAVPSSVLRDLRRAFHKNEGDGAWRMASS---PPTARRNSTKPTPSLSPSPMRLGMPDVDTYSDVGVGSPPDSCAWMGRDRDSGTISEEGQETIAKEFRAEG------LLCRPPASHVGACDSGPSRTAGLPFGTMDAGSPLT-GVHSNHDSPYFIQLDQQPKLALDEEDICEDRAGPHWPD---------------------SAAGSLYVSTYDEPTVADNDGVRREDGVLTEKVQESFGYMEGGGWAAETPGARSHNADQLPPRRPSSLEHDHDPQLANGRERGWLRRLPSVAQKIISGEELNQGEFSVADGSITPSLSSLFAYVFPDDDQHQGWLPGSRESSRSGVGGGTHSKCSGVVGTDLKS-PHIP-SSMPPVLPGGGAEAMMKENNPLVG--VTVRRPQSPQFSFMAENCCSPDAGISPATSPKPQNPE----DGQEREVQGMSCVNDIGAW---MSGASRHEDDSAQSTRPSGIPFEDDAETSTASTPTIDEAGSVSAEAGRVTGEGVRIPALSRKRKHPDARKAITPRESHCSPSVGYNGASSPSEDGSCFGSRRRRGDRRKGWWGATEGYKSP---AVHNHAVVGASRLRAEDLSCGKRSNTLRKNIEASRATEAGRYEPATAGDIALCETEASKRSTGANGTPTAVVAGDGEMSHIEGDGRRGGGDSRAALAYDQDVLGGEGAAEAGVGDFEPQTVAGVLGNLRCDDYRTVICRISSAGGAAVHSPLGAGGSRVPKAESAAGARPALRGRERPIPQVLQAGHDEIGAGA------GAVAVTVTREELVQSFLIGQAGRKFIILRARTGAILCVDQHAADERIKLEELERQVFGEDGDRRNVEVLHLDPPESISITQSDASLLQLHQEVLSSWKFEF---VVEQAQGISGCAPTA-----TLVSVPVVCGVRLSVQDLVSFLTYLRESMEPGSLAGKPPQIQHILNYKACHGAIRFGDLLSRSESLELVRQLAACAHPFVCAHGRPSVVPL 3965
M ++ R+ ++I N +R+ ++ ++Q EL+ NS+DAGAT +++ +D Y + + D+G GI + L +LV A+SK S EE+++ ST GFRGEAL SL +L+EI SRC G ++ K++++ T G GT V ++D F+ PVRR+ N +KE V R LM+ ++ V D A+ ++ + + + S+ T + +F D L+ +++ + + R TG+IS S SK Q+ Y+N + V++ + K++N S AL+ + +G R G + LFP FVLNL CP E D+ EA KT VEF DW + +L + L P + SV D R + + + AS+ P + RR + S SP++ + GS C R+R S T +E + ++ G L P+ D G + L+ + S+ D F+ + P+ D + + R P +PD S V +Y E T+AD + +D + K+ + G E GA S D +SL D + L LP V + G E+ + FA++ D + + G T S+ +G+ DL H+ SS +L + +E VG + ++ +S +F A++ + AT+ NP +GQE +W +S AS + D + P + ++G+ ++ + S + RK + RE C S +R + G Y P +H++ S ++ + +RS+ R+ EA++ +E + + A+ T AS S A +A D +E GG A+ YD + Q V +G++ D I +S + G + ++ +G + ++ +E L + ++ Q +KFI A G +L +DQHAADER++LEEL V G + + L + +++ ++ +LQ +++ + W + F +++ ++ G + T L +VP + GV LS DL+ YLR+ M+ + PP + +LN KAC GAI FGD L E +LV L + F CAHGRP++VPL
Sbjct: 1 MLQIRRLSDSIVNRLRSSTVLLDVAQIAEELVCNSIDAGATQIQVDVDAEAYFMKVDDDGCGIQRDDL-TLVGERHATSKLQSLEELERGVSTLGFRGEALSSLSDIALVEITSRCRGTPNTHRKILKDCATVSIGLCSQQRSHGTTVVVKDMFYNQPVRRRLLNTRKIPQSVKERVMRFVLMHPKISFKVTDLARQEVSVHSKSATSMGTTLSGMFGKDFLASLKEVDCSQGRLRFTGYISRNYHSLS--SKTVQYFYINRRFVKKTP-IHKLLNTWAQSKNNDSRALVVT---STQRGTYEKRGTGKQDGIGDKHLFPAFVLNLICPLSEYDITFEASKTLVEFKDWQPVVDFVRGILRSIWGDLSSVFEGGSLHASPRSPELSVKADSRSKTVRQQTSSSLYTASNMIPPMSVRRALVQGGLSDRCSPVKGSAIEHKGVDIASHGSRQSRCKQ--RERPSPTQNESDKGNLSSGTFVTGGVTIGKFLAESPSHR----DDQSLAPRGWTLASCRQAQTLSKSILSSKDIDVFVPCFEAPRSPCDSDSLTTLRLEP-FPDNISRKPTCTVDRIRSRFDFLHSPTRPFLVKSYTESTLADGMTEQSQDLIPYTKLAKFRSCRLGENMDIERGGASSEVPDL---NMRASLWSGSDDSYDYTSKPDSLDLLPEVRSRSPDGSEVQES----------------FAWMCSGSDPEDKCITHGK--------GLTRSETNGLERFDLNDFDHLEESSRFSLLRTQMSITEQEEGEQEVGERLELKSERSVRFKLEAQDWRDHEDFDQQATNIFSWNPSKIGSEGQE-------------SWNRDLSDASGRKSDYCR--------------------PRVKRKLETF-----LSGQSAQLLSPSGNTVEHETRKYDSEREW-------------------CIISSKRHRRSQSG----PPFYIPPNRCGIHDNPPNSLSTIKKVLVEISERSDHNRR--EAAQRSEKSTCQTSHYDTCAMDTTSASSFSASCIRNGQACIADD----LVERPLTEGGCSGPASRTYDAASV---------------QKVLPDVGSVGLDQTAHTDDAIQDMLKEFSNSYMTKDGGVL-----------------------------DLSSGILCWNSMSFLPESIVKESLQHARVLQQVDKKFIPAVA-DGVLLIIDQHAADERVRLEELRDDVLGSG---QFGQASPLSCTQQLTMAFTEQQMLQTYRDQIEDWGWRFKLRLIQSSETTEGGSSTTGMCTVLLSAVPCILGVMLSGADLME---YLRQLMDTQGSSAPPPAVIRVLNNKACRGAIMFGDTLLPVECTQLVEHLKKTSLCFQCAHGRPTMVPL 1222
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
UPI001425B8A7 (DNA mismatch repair protein Mlh3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B8A7)
HSP 1 Score: 168 bits (425), Expect = 3.700e-38
Identity = 103/359 (28.69%), Postives = 202/359 (56.27%), Query Frame = 3
Query: 66 VERIDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSL-GLTSLLEIQSRCPGK-ESYAKVVREGQ-TQFFGPTRLPIRAGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGADGQGVRRVRNP-NASS-GQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDWAAAKNACVAMLLAFL 1127
+E + ++I + +R+G + +++Q + EL++NS+DAGA+ + ++ ++ R + DNG G+ ++L S++ A+SK + ++++ +GFRGEA+ SL L+S+LEI+SR ++ K+ TQ F GT VT+ F PVR+K NE+ E+ I+ ++ +AL++ ++ ++ D + + I+L+ TGS+ ++FA +F K + +++K+ + F + GFI H +K QF+Y+N + + + + L K++N+ + L + + + ++ N NA+S G+ + F +FVLN+ CP + ++ ++ KT VEF +W C ++ FL
Sbjct: 8 IEHLQKSIVSRLRSGIAIDSITQCIDELVTNSIDAGASCIAVRTNISILRFQVVDNGCGLTKDQL-SIIGERYATSKCNELSDLERLEKFGFRGEAIASLKDLSSILEIESREKASLNTFCKIFSNSSPTQVFQKKNDRPSQGTTVTVHSLFHNLPVRQKRINESLELESIRHRLAAIALIHPKISFSLRDDSSNSIILQTRKTGSIGRSFASLFGDKKAACLKEIKYCNEDFSIEGFIGTDG----HHNKSLQFMYINSRLLLKTK-LHKLVNTLLSKSL-IARKKLWQTSETIQSTYNQINANSPGKATDQFGIFVLNISCPLADYEITLDPRKTLVEFKEWEKIIGCCTELVNDFL 359
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
A0A6H5JXH6_9PHAE (MutL_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH6_9PHAE)
HSP 1 Score: 151 bits (382), Expect = 5.190e-38
Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 3
Query: 3507 QVFGEDGDRRNVEVLHLDPPESISITQSDASLLQLHQEVLSSWKFEFVVEQAQ-GISGCAPTATLVSVPVVCGVRLSVQDLVSFLTYLRESMEPGSLAGK--PPQIQHILNYKACHGAIR 3857
+VFGE +RRNVE L LDPPE +SIT+SDA LL+ H+EVLSSW+FE V+Q Q G G P TL +VP+VCGVRLSVQD V FL +LRES+EPG A + PPQ+QHILNYKACH AIR
Sbjct: 15 KVFGETRERRNVERLLLDPPEKLSITRSDAELLEEHREVLSSWRFEVRVDQGQQGGDGLTPVVTLTAVPMVCGVRLSVQDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYKACHSAIR 134
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
A7RP06_NEMVE (Predicted protein (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RP06_NEMVE)
HSP 1 Score: 155 bits (393), Expect = 8.760e-38
Identity = 102/342 (29.82%), Postives = 186/342 (54.39%), Query Frame = 3
Query: 66 VERIDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSL-GLTSLLEIQSRCPGK-ESYAKVVREGQTQFFGPTRLP-IRAGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGADGQGVRRVRNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDW 1082
+ +D I + +R+G +ST++QA+ EL++N++DAGA+ + + +D+ +R+ +SDNG GI + L+ ++ +SK S ++++ S+YGFRGEAL S+ + +LEI ++ ++Y K+ R G+ + P GT VT+ D F PVRRK + + +++ + +AL++ V+ + + A + L+ SVT TF+Q+F + K + + K F+++G I H +K QFVY+N + + + + + K++NS + + V +R+P S +K +F++N+ CP DV++E KT VEF DW
Sbjct: 2 IRHLDTGIRSHLRSGVAISTLTQAIDELVTNALDAGASCINVHVDIPSFRVQVSDNGSGITKDNLE-ILGQRYCTSKCHSLSDLRKLSSYGFRGEALASIRDICGVLEIVTKHSSSYKTYCKLFRSGKPLTVTQSCFPRSNTGTTVTIHDIFSNLPVRRKLLSSVLDFERVRQRLLSIALIHPEVSFILFNDATFQKCLQTRKCLSVTSTFSQLFGNLKARSLKDVFSEHKHFKVSGHIGIEP----HHNKNLQFVYINSRLLLKTK-IHKLLNSMLSKSSFIKQLPSNMSENDVP-MRSPPQRSSEKNA---IFIINITCPLMVYDVILEPSKTLVEFQDW 333
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
A0A1Y2GRJ7_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GRJ7_9FUNG)
HSP 1 Score: 159 bits (402), Expect = 1.080e-35
Identity = 109/355 (30.70%), Postives = 195/355 (54.93%), Query Frame = 3
Query: 57 MAEVERIDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSLGLTSLLEIQSRCPGKES--YAKVVREGQTQFFGPTRLPIRA--GTIVTLRDAFFKWPVRRKAANEAA------EIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGS----VTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGADGQGVRRVRNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSD 1079
MA + + +A+E+RA +V ++ Q EL+ NS+DA A+++E+K+D+ + L +SDNG GI + + + + T A+SK SS ++++ STYGFRGEA+ ++ SLL+I SR P +++ ++ + + G+ F GP+ R GT +++RD F+K+PVR++ +EA+ E+ +K + +AL N ++ V+D + +L S +T F Q +S L+ R + + TG+IS + H+++ FQF ++N + ++ E LQK + F +++ +A + +E +PV+VL+L CP E D+ V+ K+ VEF D
Sbjct: 1 MASIHTLASGVADELRASLVVHSLEQCAAELVQNSIDANASTIEVKVDIAGHSLQVSDNGDGITSADM-ARIGTRYATSKCSSLQDLKCVSTYGFRGEAVAAIAEMSLLDIVSR-PREQNQVFSTIFKGGEKLFCGPSSKSPRYIHGTTISVRDLFYKFPVRQRYWSEASISKLDLELEKVKRSIEALALANPKISFIVVDMMRGNKILNCRKADSRLHRITAVFGQALSSS-LTFVRS-NAEDQTYSFTGYIS----TVGHYNRLFQFFFLNNRPIQ-CESLQKTVTQLFQQ-----------SSFSKDSLQHHDADVRRSRERYPVYVLSLVCPTSEYDICVDPAKSMVEFED 335
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
UPI000C6CC2D6 (DNA mismatch repair protein Mlh3-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6CC2D6)
HSP 1 Score: 157 bits (398), Expect = 1.190e-35
Identity = 99/357 (27.73%), Postives = 200/357 (56.02%), Query Frame = 3
Query: 75 IDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSLG-LTSLLEIQSRCPG-KESYAKVVREGQTQFFGPTRLPIR---AGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGAD-GQGVRRVRNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDWAAAKNACVAMLLAFL 1127
+ + ++R+G +++ Q L EL+ N++DA AT+V ++LDL +R+S+ DNG+GIP+++LQ + +SK + +++ +G+RGEAL SL ++ ++EI S+C ++++K+ +G+T+ G T+ + +GTIV++ + + PVR+ + ++ + ++ +AL+++N++ +++ +IVL+ + S+ F ++ K +K++ + + G+IS S H SK++QF+YVN ++V + + L K+ N L L+ RG D +P+ +S Q +F+LN++CP + D+ +E +K+ +EF +W + AFL
Sbjct: 6 LPSEVVCKIRSGIAITSFGQCLNELVLNAIDAFATNVCVRLDLSSHRISVKDNGKGIPSDQLQ-FIGERYFTSKCHNLKDLNNLKYFGYRGEALASLREVSGIIEIVSKCSNCSDTFSKLFVKGKTE--GVTKCSTKISESGTIVSVINLMYNMPVRQNMISNILDLEHCRNQLANIALIHSNISFVLINEITEEIVLQTHKSNSILTNFITLYGQKKAKNLKKVECVLSPYEIKGYISLDS----HHSKDYQFIYVNNRHVLKTK-LHKITNLLLKKYL-LIKHRGSKDISSSTPNSNSPSKNSNQ----HAIFILNIKCPFNKYDLCLEPQKSLIEFKEWRQVLKCLQEAVYAFL 349
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
Q8R407_MOUSE (MutL-like protein 3 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=Q8R407_MOUSE)
HSP 1 Score: 148 bits (373), Expect = 3.980e-35
Identity = 96/341 (28.15%), Postives = 185/341 (54.25%), Query Frame = 3
Query: 75 IDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRLSISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSLG-LTSLLEIQSRCPGK-ESYAKVVREGQ---TQFFGPTRLPIRAGTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGADGQGVRRVRNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDW 1082
+ +++ ++R+G +S++ Q + EL NS+DA AT V I++++ +++ + DNG G+ + ++ V +SK S +++ + YGFRGEAL S+ + +EI S+ +++ K+ + G+ T TR + GT VT+ + F+++PVRRK+ + E +++ V ++LM+ +++ ++ + +VL+ T + F QI+ K R+++F +K+F +G+IS S H++K QF++VN + V R + L K+I+ + + G+ R N + EL ++V+N++CP E DV +E KT +E W
Sbjct: 5 LSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRVNMETFQVQVIDNGLGMAGDDVEK-VGNRYFTSKCHSVRDLENPAFYGFRGEALASIADMAGAVEISSKKNTTLKTFVKMFQNGKALATHEADLTRPSV--GTTVTVYNLFYQFPVRRKSMDPRLEFEKVRQRVEALSLMHPSISFSLRNDVSGSMVLQLPKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFSGYIS----SEAHYNKNMQFLFVNRRLVLRTK-LHKLIDFLLRKESIICRPKNGS----ASRQMNSSPRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIELQSW 333
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Match:
A0A139A5T6_GONPJ (DNA_mis_repair domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A5T6_GONPJ)
HSP 1 Score: 148 bits (374), Expect = 5.370e-34
Identity = 109/367 (29.70%), Postives = 197/367 (53.68%), Query Frame = 3
Query: 57 MAEVERIDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLLRYRL--SISDNGRGIPAEKLQSLVATAQASSKASSTEEIQQASTYGFRGEALYSLGLTSLLEIQSRCPGK-ESYAKVVREGQTQFFGPTRLPIRA-GTIVTLRDAFFKWPVRRKAANEAAEIMLIKEHVSRMALMNNNVAITVLDSAKSKIVLKAAATGSVTKTFAQIFASDKLSLCRKLKFNFKQFRLTGFISPPSSSACHWSKEFQFVYVNCKNVRRLEFLQKVINSAFAPCLALLCGRGGADGQGVRRV-------RNPNASSGQKQELFPVFVLNLECPRKEVDVMVEAEKTRVEFSDWAAAKNACVAMLLAF 1124
M +V+++ + ++R+ ++++++Q L E++ NS+DAGAT ++I D L +SDNG GI E L+ +V +SK S+ +++++ TYGFRGEAL S +L+EIQSR +S+A VV++G+T +GP+ +P + GT VT R+ F K+ VR K N ++ V + L+ +++T++D + + ++ T S++ F Q+F + ++ + +++++G IS S H +K QF+YVN + + + K IN F + +C AD + + + P+ E + +F L + CP D++++ K+ VEF+DW A +LLAF
Sbjct: 1 MPQVQQLPNDAIRKLRSTVVINSVAQLLSEVLQNSLDAGATVIDITFDANADDLFVEVSDNGEGIRPEDLK-MVGQRYHTSKCSNLDDLKKLETYGFRGEALSSASDVALVEIQSRHRDHVQSFASVVQDGRTIRYGPSLIPRKGPGTTVTARNIFSKFSVRLKRVNSDEIRDQVQRAVETIILVWPQLSLTLVDRGQQRRIITKRKTNSLSVVFQQLFGASIAQHLSQVDYKSGEYQVSGVIS----SRGHHTKLLQFIYVNNHALAVCD-IHKRINQLFTD--SDICRP--ADSEDINQTVGGSETRLGPSRERKTTLEKYGIFALCVTCPPSAYDILIDPSKSHVEFADWDA-------VLLAF 350
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.761.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.96e-257 / Id = 40.79 Expect = 4.89e-147 / Id = 42.82 Expect = 1.46e-45 / Id = 23.39 Expect = 3.70e-38 / Id = 28.69 Expect = 5.19e-38 / Id = 65.83 Expect = 8.76e-38 / Id = 29.82 Expect = 1.08e-35 / Id = 30.70 Expect = 1.19e-35 / Id = 27.73 Expect = 3.98e-35 / Id = 28.15 Expect = 5.37e-34 / Id = 29.70 Sequence D7G9D8_ECTSI A0A6H5JWV7_9PHAE A0A2R6XQ32_MARPO UPI001425B8A7 A0A6H5JXH6_9PHAE A7RP06_NEMVE A0A1Y2GRJ7_9FUNG UPI000C6CC2D6 Q8R407_MOUSE A0A139A5T6_GONPJ Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 813.9 Seed ortholog evalue 1.1e-232 Seed eggNOG ortholog 2880.D7G9D8 Preferred name MLH3 KEGG ko ko:K08739 KEGG Pathway ko03430,map03430 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000228,GO:0000280,GO:0000793,GO:0000794,GO:0000795,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003696,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005712,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048285,GO:0050896,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0099086,GO:0140013,GO:1901360,GO:1901363,GO:1903046,GO:1990391,GO:1990837 EggNOG free text desc. mismatched DNA binding EggNOG OGs COG0323@1,KOG1977@2759 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03400 Exons 16 Model size 4592 Cds size 4032 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927366.6368103-UTR-C-linearis_contig101:571176..571232 1622927366.6368103-UTR-C-linearis_contig101:571176..571232 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 571177..571232 + 1690879656.4589221-UTR-C-linearis_contig101:571176..571232 1690879656.4589221-UTR-C-linearis_contig101:571176..571232 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 571177..571232 + 1622927366.8254888-UTR-C-linearis_contig101:588743..589247 1622927366.8254888-UTR-C-linearis_contig101:588743..589247 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 588744..589247 + 1690879656.6383579-UTR-C-linearis_contig101:588743..589247 1690879656.6383579-UTR-C-linearis_contig101:588743..589247 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 588744..589247 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927366.6451323-CDS-C-linearis_contig101:571232..571323 1622927366.6451323-CDS-C-linearis_contig101:571232..571323 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 571233..571323 + 1690879656.4715147-CDS-C-linearis_contig101:571232..571323 1690879656.4715147-CDS-C-linearis_contig101:571232..571323 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 571233..571323 + 1622927366.6566908-CDS-C-linearis_contig101:571552..571690 1622927366.6566908-CDS-C-linearis_contig101:571552..571690 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 571553..571690 + 1690879656.4803245-CDS-C-linearis_contig101:571552..571690 1690879656.4803245-CDS-C-linearis_contig101:571552..571690 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 571553..571690 + 1622927366.6670103-CDS-C-linearis_contig101:572189..572329 1622927366.6670103-CDS-C-linearis_contig101:572189..572329 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 572190..572329 + 1690879656.4958816-CDS-C-linearis_contig101:572189..572329 1690879656.4958816-CDS-C-linearis_contig101:572189..572329 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 572190..572329 + 1622927366.6798487-CDS-C-linearis_contig101:572912..573035 1622927366.6798487-CDS-C-linearis_contig101:572912..573035 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 572913..573035 + 1690879656.5046494-CDS-C-linearis_contig101:572912..573035 1690879656.5046494-CDS-C-linearis_contig101:572912..573035 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 572913..573035 + 1622927366.690769-CDS-C-linearis_contig101:573239..573324 1622927366.690769-CDS-C-linearis_contig101:573239..573324 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 573240..573324 + 1690879656.5146718-CDS-C-linearis_contig101:573239..573324 1690879656.5146718-CDS-C-linearis_contig101:573239..573324 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 573240..573324 + 1622927366.7023358-CDS-C-linearis_contig101:573591..573689 1622927366.7023358-CDS-C-linearis_contig101:573591..573689 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 573592..573689 + 1690879656.5256405-CDS-C-linearis_contig101:573591..573689 1690879656.5256405-CDS-C-linearis_contig101:573591..573689 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 573592..573689 + 1622927366.7131417-CDS-C-linearis_contig101:574491..574578 1622927366.7131417-CDS-C-linearis_contig101:574491..574578 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 574492..574578 + 1690879656.53444-CDS-C-linearis_contig101:574491..574578 1690879656.53444-CDS-C-linearis_contig101:574491..574578 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 574492..574578 + 1622927366.7258224-CDS-C-linearis_contig101:574837..575002 1622927366.7258224-CDS-C-linearis_contig101:574837..575002 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 574838..575002 + 1690879656.5435774-CDS-C-linearis_contig101:574837..575002 1690879656.5435774-CDS-C-linearis_contig101:574837..575002 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 574838..575002 + 1622927366.7375762-CDS-C-linearis_contig101:575431..575866 1622927366.7375762-CDS-C-linearis_contig101:575431..575866 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 575432..575866 + 1690879656.5541327-CDS-C-linearis_contig101:575431..575866 1690879656.5541327-CDS-C-linearis_contig101:575431..575866 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 575432..575866 + 1622927366.7509878-CDS-C-linearis_contig101:576253..578007 1622927366.7509878-CDS-C-linearis_contig101:576253..578007 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 576254..578007 + 1690879656.5699656-CDS-C-linearis_contig101:576253..578007 1690879656.5699656-CDS-C-linearis_contig101:576253..578007 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 576254..578007 + 1622927366.761727-CDS-C-linearis_contig101:578279..578511 1622927366.761727-CDS-C-linearis_contig101:578279..578511 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 578280..578511 + 1690879656.5838447-CDS-C-linearis_contig101:578279..578511 1690879656.5838447-CDS-C-linearis_contig101:578279..578511 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 578280..578511 + 1622927366.7724044-CDS-C-linearis_contig101:584295..584400 1622927366.7724044-CDS-C-linearis_contig101:584295..584400 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 584296..584400 + 1690879656.5962532-CDS-C-linearis_contig101:584295..584400 1690879656.5962532-CDS-C-linearis_contig101:584295..584400 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 584296..584400 + 1622927366.7833352-CDS-C-linearis_contig101:584557..584668 1622927366.7833352-CDS-C-linearis_contig101:584557..584668 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 584558..584668 + 1690879656.6050706-CDS-C-linearis_contig101:584557..584668 1690879656.6050706-CDS-C-linearis_contig101:584557..584668 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 584558..584668 + 1622927366.793968-CDS-C-linearis_contig101:585137..585257 1622927366.793968-CDS-C-linearis_contig101:585137..585257 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 585138..585257 + 1690879656.6127992-CDS-C-linearis_contig101:585137..585257 1690879656.6127992-CDS-C-linearis_contig101:585137..585257 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 585138..585257 + 1622927366.8060849-CDS-C-linearis_contig101:588202..588318 1622927366.8060849-CDS-C-linearis_contig101:588202..588318 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 588203..588318 + 1690879656.6211135-CDS-C-linearis_contig101:588202..588318 1690879656.6211135-CDS-C-linearis_contig101:588202..588318 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 588203..588318 + 1622927366.814742-CDS-C-linearis_contig101:588511..588743 1622927366.814742-CDS-C-linearis_contig101:588511..588743 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 588512..588743 + 1690879656.629711-CDS-C-linearis_contig101:588511..588743 1690879656.629711-CDS-C-linearis_contig101:588511..588743 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 588512..588743 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.761.1
>prot_C-linearis_contig101.761.1 ID=prot_C-linearis_contig101.761.1|Name=mRNA_C-linearis_contig101.761.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1344bp
MAEVERIDENIANEVRAGAIVSTMSQALRELISNSMDAGATSVEIKLDLL back to top mRNA from alignment at C-linearis_contig101:571177..589247+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.761.1 ID=mRNA_C-linearis_contig101.761.1|Name=mRNA_C-linearis_contig101.761.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18071bp|location=Sequence derived from alignment at C-linearis_contig101:571177..589247+ (Chordaria linearis ClinC8C monoicous)AGAGACCCGCCGGCCGTTGAACCACACCACAATTTGTCTCGTCTCTCTGG
GTAGCT ATGGCTGAGGTGGAGAGAATCGACGAAAACATTGCCAATGAAGT
TCGAGCTGGTGCTATTGTTTCCACGATGTCCCAAGCTCTCCGAGAAC GTG
AGGATGGCCCAAATCTGCAATCTGCCTATGCTTTGAAATCAATGTCGGCA
TACTCTCTGAACATCCGTGTTGGGGTGTCCGCCGACCCGGCCTGCTGTGT
CCTGGCCCAGATTGTTGGGTGGAGTGGAAATATTCGCTGGGGTTGTGCTC
TGGAGCTGGTCTTGAATGTCGACCCAACCCATTTCTTCACCACCCTGCTG
CTGTAACTCTTGATATCAAAACGAAGTCATCTCCAACAGCATGGATGCCG
GTGCAACCTCCGTGGAGATCAAGTTGGATTTGCTCAGATATCGACTCTCC
ATTTCGGACAACGGCAGAGGCATTCCGGCAGAAAAGCTGCAGTCACTCGT
TGCAACTGCACAAG GTGTGAAAATAGCTTGAAGACTGTACTTAGACTGCG
GTGCCACAGGAAAAACCACGGTGTGTAATGTGTTCATCGACGACACCGAG
GGGCCGGCCCTTTGATGTACCGTAGTTTTGTTCAATAGCGGCACTCAGCA
CTTGGAATGGCACCTTTTGTGTGAGCTTGATCGCACATCGCGAGGGAGGT
GTCAATTAACTTTGATTTCCCCCGTGGGTGGCAAGGAAATAACTCAAGTC
GCACACGCTAGCCTGTATCTAGCTGTATCCAGTTAGGCCATCCTCTGCTG
TTGTTCATCCACACTCGGGCGACAGAGCTGGTGCCTTCTTTCCCCCCCTA
CGGATACCCCCCGCATTTACCAATACTGGACGAAGATCCGGTAAATTTGA
TGCCTTTGTTTTTTTCAGCGGACGGGGGGGCGGGTCTCGAGTCTTGAGTC
GATGTTTTGGTTTTCTCCCCTGCCTCCCCCATTTCTTGCTTTTCCGCCGC
GGTATCAACCCAGCCAGCTCGAAGGCCAGCTCAACCGAAGAGATACAGCA
AGCATCCACGTATGGGTTTCGCGGCGAGGCTCTGTACAGTCTTGGCTTGA
CATCTCTGCTCGAAATCCAGAGCCGCTGTCCGGGCAAGGAGTCATACGCA
AAG GTTGGAGGCTTCACAGCTGTTCGTTTCTGATGCGTAAGAAGAGTCCC
CTCCCTGCAAACACTCCCTCACACGTAAACCGCTGTCCTGCCCATACAAA
ACGACAGCAGTGCCCACGAGGCTGTTCTGGCTGTACAAAAACGATGAACA
GCGTTGCCCACAAGTAGCTTTCCAAATTTGTTCCACCCCTGCAGGGGTAC
AATAAAAGCAGTCGTGCGACAGCCCTCAGAAAGCAGTAGTTGCCAGCCTA
CCAGAGTAGCGACCACCCCATTCAGAGATGTGACAGGACAAGAGCGCATT
CTGCCGGGCGAAATTATGTCGTCGCTCTCTCTGCTTAAAGGAGCAGACTC
TGGGTTCCGAGAGGAGCCTCTCGGTTGGCAAGACTCCAATCCTGTCTATG
AAGCCTTACCTATGCTGTGAATGAAGTCTTGAGCCGCTAGCTTCGTTGTC
GCCACCAGGTGTCTGTCGTACATAGAAAGTTGTGAACGCCTGAAAACTCA
ACTTGAACGGTAGAAAAAACTGCTGGCTGGGTCCTGATGCTGGGGGCTGC
TGCGGGGTGGTGCTGCTTCTGGTGCTGAAATTACAGGTGGTTCGAGAGGG
CCAAACCCAATTTTTCGGGCCCACTCGACTCCCCATCCGCGCGGGCACTA
TCGTCACGTTGCGGGACGCGTTCTTCAAGTGGCCCGTGCGTCGAAAGGCA
GCCAACGAG GTGCCGACAACAATCGAGGGACTGCAAAAATCCCATCAAGT
TTATCATGGAACTTTAGCTCTGACTCGACAATCGCGCAGATCGAGCGGCA
CCTTGTACCGTATCTTTTTTGTGCAGGAGTCAATGCTGACGTGACGTATG
TTAGCTGTCGGCTCTTACCTCGAGATTCTTGACAGCATTCCATTGCCCGC
TTCCTTGAAACAGGCGGCGGAGATAATGCTCATCAAAGAACACGTATCTA
GGATGGCTCTCATGAACAACAACGTGGCGATCACTGTGCTGGACTCCG GT
GAGTTTGGCCTTCTATGATGCTTTTTTGCTCACTGAGCTTAGGCAACACG
AGACAAAGCTTGACAATTGGGAGTTTTGTTGTTCGCTCGTGTGGTGGCCG
CTTCGCTAATTTATTATCTGCCAGCAGAGCGTGCGAATCCGGTGGAACTG
CTGTAATCTTTTTGTCTTCTGCACATTCTGGGGTGCGTCATTTGTCTGAA
GAAAGTTGCTCTCTTGCTGAATCTCTGCTCATTTTCCGTCCGTGTGTTTG
TGTGCGTGCGGTCAGCCAAGTCTAAGATAGTGCTGAAGGCTGCTGCGACG
GGGAGCGTAACCAAGACCTTCGCACAAATATTCGCCTCGGACAAGCTCTC
CTTATGCCGCAAG GTGAAAAGTTAACTATTGTGCCATGCGTGATATTTTT
TTTCCTTTTTTTTCCGTCCCATCAGAGGCCTAGCCCGCCTTCTCTTCGGT
GCACACTGCACGTTGCGGTGTAGGCGCACATACACGTTTCGGTGTACACT
CCCTACAACTAGCTAGACTACCATCCAGGGTCACACAGGAGGGGGTACCC
ACGCCTGGGGGTTTTCTTCTTTTTCTTTTTTCTTTTGTCCCCACCTACCT
CCTGCAGTGGCTGCCTCTGAACTTTTTATCGCGAGGCGGGTACAGCAATC
CCTCCCCTCGTCATCAAACAATGAAGTGGACGTTTTTTTGTTTACTACCG
AGCTTCCAGCTTTATAGCTTTCAACGTACCAGGGACAAAAGTGAGAAAAA
AGCTCGCTTCGTCGGGACTCGAACCCATGACCTGGCGCTTAGGAGGCTGC
GTGGGTACCTACTAGACCTTCGGGGCGACCGGCAATGATATGGAGACATG
TGATCCCAACGCCCGTTTTACGGCGATCGCATGTAGCACGCAGCTCGTGT
CCTGTTGAGATTCACTTCCCACGTACTTACTTGACTCTTGACTAAGCATC
TGTGCCCGTCACGGCTAAGCTTCCATCTTCAGTAGCAGCCAGCACATCAC
GCCCATTTTCAAAGCAGGCGCAGCGATTCGCGTGTGTTTGGCACCAACTA
CCTACCTGCTTCACGACGAACCGAGCTATGTAGGCGTTCAAAACATGGCG
TGCTCCACGTGGTGATTGAACCATTCGCTATGCCCCATCGACGCGCGATA
TTTCGACCCGCGCAGTTGAAGTTCAACTTCAAGCAGTTCCGGCTCACGGG
CTTCATTTCTCCGCCTTCATCCAGTGCCTGCCACTGGTCCAAAGAGTTTC
AG GTGGAGTCAGATTTCGTGTCCCTTCCTGGTCGATATGTGGAAAGTGAC
CCATCTTTTGGACAAACCTTGAGTCACTCATTGGAACTGGGCAAAGGAAA
GCGTGTCGTGGTGTCAATACTTTATTCGTACTAAACGAGCTTTACTCCCT
TTTGTTTTGCTGATCCTGTTTTCCCTTCTCTCATTCTTCGCTGACCCAGC
ACCCTTGGCTGCCACTCTACGATTTGCCATTTGGTGCTGTTTGCTCACAA
CTGCATCGCAGTTCGTGTACGTTAACTGCAAGAATGTTCGAAGACTCGAG
TTCCTGCAAAAGGTGATAAACTCCGCCTTCGCGCCTTGCCTGGCCCTCCT
CTGCGGCCGTGGCGGCGCTGATGGGCAGGGTGTTCGGAGAGTGCGAAATC
CGAACGCATCTTCAGGGCAGAAGCAG GTGATTTTATACGTTTTGGTATTG
GAGGGAATGCAAATGCCCCAAAGTACATTGCGGCCAAGAGGTGTGCGTAG
TGATGAGTGTTGTGGCCGCGTATTGTCGCGGCTGTGGAAGAACGGCGCGA
AGCATCCCCGCCAACTTGTCTCACTGCGCCAAGCGTCTTGCGTGTGTTCA
TCTCGTTAGTATCGGAAGCTCGTGGCCTGCTAGGTATTCGCTCTACCATG
CGCTACAGAGCTTCGATTGCAATGCTGCTGTTGTTTGGACAGCTTTTTCT
AGGGTTGTGACTCGAACGTCGATGGCAGGTCAAACAATCGTTTGATGGAC
GCTCTCCGTTTTGAGTATTTACTCTTGGTAAAATGCGCGAAGGCGTGCGA
CCTTGATTCGACGCCAGCAATACCCCCAGACACTCTCGCTTTGGCTTTCG
AACAGGAGCTGTTCCCGGTGTTCGTTCTCAACTTAGAGTGCCCTCGAAAG
GAGGTGGACGTCATGGTGGAGGCGGAGAAGACGCGGGTGGAATTCTCCGA
CTGGGCGGCTGCTAAAAATGCATGCGTTGCTATGCTGCTCGCTTTCTTGC
CTCATTTCCCACATGCGGTTCCGAGCTCTGTGTTGCGGGACCTTCGGCGT
GCGTTCCACAAGAACGAGGGCGATGGAGCGTGGAGGATGGCTAGTTCGCC
GCCCACCGCCAGACGAAACTCCACAAAGCCCACGCCGTCACTTTCTCCGT
CTCCCATGCGGCTGGGTATGCCGGACGTAGATACATATTCTGACGTGGGG
GTGGGCTCGCCGCCGGACAGCTGCGCCTGGATGGGACGGGACCGAGACTC
GGGCACAATCAGCGAGGAAGGGCAAGAGACTATCGCCAAG GTGTGGCACA
GTAAACGACCTGAAGCTCACACGTGTTTCACATCCGGGCTGGTTTGCCTG
AGCATAGCTGACACGTGGGGAGCTACTTGCACTGCAGCTTCGTTGTGCTT
CCTTTTTCTTAAGCCGTTGGCTGTTTGCATCTGGCTATCCCTTTCGGTGA
ATACCCGAGTGGGGCTGCTCCCTGTGGAAGTTGATGGTTGAATTGGCCGT
GCTTTCATCCCCCTCCGTTGTCGATATATATTTTGTCCTAGTGTTCGAAC
AACATTGCCCCCCCCTGGAAACATGACGCTTGTACGTCACTCGTTCGCCA
CATGGCCGACGCACGGCTTTGTGTTAGACCCTTTCTCCTCCGCTGTAATA
TGTTTCCTTCAGGAACTTCAACGCGAGGAATTCAGGGCTGAGGGCCTTCT
GTGCCGGCCTCCCGCCTCGCACGTTGGTGCTTGTGACAGCGGTCCATCAC
GAACTGCAGGTCTTCCGTTCGGTACCATGGACGCGGGTTCCCCACTTACC
GGCGTGCACTCGAATCACGATTCGCCGTATTTCATTCAACTCGATCAACA
GCCGAAACTTGCCCTCGACGAAGAAGATATTTGCGAGGATCGGGCTGGAC
CACATTGGCCAGATTCCGCAGCTGGTTCCCTCTACGTGTCGACGTATGAT
GAGCCGACGGTAGCGGACAATGACGGCGTCAGAAGGGAAGATGGCGTGTT
GACGGAGAAGGTGCAGGAGTCGTTCGGGTACATGGAGGGCGGAGGCTGGG
CGGCGGAGACGCCCGGTGCTAGGTCTCATAATGCCGATCAGCTGCCGCCA
CGTCGGCCGTCGTCATTGGAGCATGACCATGATCCTCAGTTGGCTAACGG
CCGAGAACGTGGCTGGCTTCGTCGCCTTCCGAGCGTAGCCCAAAAGATAA
TCTCCGGTGAGGAGCTCAACCAGGGCGAGTTCAGTGTTGCCGATGGCTCG
ATTACGCCCAGCCTGTCAAGTCTCTTCGCCTACGTCTTCCCTGACGATGA
CCAGCACCAGGGGTGGCTTCCGGGATCGAGAGAAAGTAGCCGCAGTGGTG
TTGGCGGCGGCACACATTCAAAGTGTTCCGGGGTCGTAGGGACAGATCTG
AAATCTCCGCATATCCCGTCTTCGATGCCACCGGTACTGCCGGGGGGTGG
CGCCGAAGCCATGATGAAAGAGAATAACCCGCTTGTTGGTGTCACTGTGC
GACGCCCGCAAAGCCCGCAGTTTTCTTTCATGGCCGAGAACTGCTGTTCG
CCAGATGCCGGTATCTCTCCGGCGACTTCCCCGAAGCCTCAGAACCCAGA
AGACGGCCAAGAGCGGGAGGTGCAGGGGATGAGCTGTGTGAACGATATCG
GTGCATGGATGAGTGGTGCAAGTCGGCATGAAGACGATTCTGCTCAAAGC
ACAAGACCGTCTGGGATTCCTTTTGAAGACGACGCTGAAACATCTACTGC
ATCGACGCCCACCATCGATGAGGCTGGATCAGTGTCAGCAGAAGCGGGCC
GGGTGACTGGCGAAGGAGTGCGCATCCCCGCCCTCTCGAGAAAGCGAAAG
CACCCGGATGCAAGAAAGGCCATTACTCCGAGAGAGTCGCACTGTTCACC
ATCTGTAGGCTACAACGGTGCCAGTTCTCCTAGCGAAGATGGTTCCTGTT
TCGGTTCGAGGCGCCGTCGTGGTGACCGACGTAAGGGGTGGTGGGGTGCA
ACAGAAGGGTACAAGTCTCCTGCTGTACACAACCACGCAGTAGTAGGCGC
TTCCCGTCTTCGAGCCGAAGATCTGTCATGTGGAAAAAGGAGCAACACCC
TGCGAAAAAACATCGAGGCGAGCAGGGCAACAGAGGCCGGACGATACGAA
CCCGCTACGGCGGGAGACATCGCTCTGTGTGAAACTGAGGCCAGCAAGCG
GAGCACGGGGGCAAATGGCACACCAACTGCTGTGGTTGCAGGGGATGGTG
AGATGTCCCATATCGAGGGTGATGGAAGAAGGGGTGGGGGTGACAGCAGG
GCCGCACTCGCCTATGATCAGGATGTGCTAGGCGGTGAAGGGGCAGCTGA
GGCAGGCGTGGGGGACTTTGAGCCGCAAACCGTGGCCGGTGTTCTTGGAA
ATCTCAGGTGCGACGATTATCGTACCGTGAT GTGTACGTTGAGGCATGTG
GGCTGGTTCAAGTCGAACCTCAGACGCCACACGCTGTAGTGGCGCATGTC
GGTATAATTGCTGTGTCTCTCACACGGGGGTTGTGTCCCGTCTCTTCCAA
TGGCCTTAGCTATTCTGTCCCTAAACCTCATCGCTGGCAGGAAACGCGTT
GGACACAGCAGTACTGTAGTTCTGCCCTGACTTAAGCACCACCCGCGGCT
TTTGCTCCCTTGCGTCGTTTTGCACGGTGATTTTTCGGTGAACGCTCCCA
TAGTTGTCGTATCTCAAGTGCGGGTGGCGCCGCCGTCCACTCGCCCCTTG
GGGCTGGCGGAAGTAGAGTACCCAAGGCTGAGAGTGCAGCCGGCGCGCGG
CCCGCGTTGCGTGGGAGGGAAAGGCCTATACCTCAAGTTCTTCAAGCTGG
TCACGACGAGATCGGTGCAGGGGCAGGGGCAGTCGCAGTGACGGTCACGC
GCGAAGAACTGGTACAGTCGTTTTTGATTGGTCAG GTGAGAGGGACGCGA
GCGGTTGGCAGCGTCATTGTCGATAAGATTGCGGGGCCTCATTACTCAGT
TGGATCAGAAAGTGTTTGTTTTCGTTTCCGGCTTGGTTTATGCTGAAGTC
AAATCAAAGGCATGCCATGGGGCTCATTCGCCACTTTCATCTGTGGGTTC
GTCGCCGCTCTCTCGCCGTTCTCGTCGTCTGTATCGTCGTTCGGGCTCAG
GAGTAGGGAGTTCAGAATTCAAGATCGAATTAAAAATAAATAATGGTGAG
CACTGCCCATCAGCGAAAGAAAAAGGCGCGCATGCCTACGAAATCGACTA
GAGTGCTCGTCTTTCCTATCCACCCGCCTGAGGAAGAAGAGGATTTGAAA
GCAACTATGAATACTTGGATTTATGAGCTTTTAGGGAGAAAATAGAGACT
CTACAGGGGGAGATGAGAATTAGGAGCATATCTAAGTTTATTACCCCGGT
GGGAAAACGATATTCATTGTAGGTGATACTTGGTGGCCATCTAGATCAAA
CAGATGTCCAATTTTCAGTTTAAATTGGCTGCTGTCGCCGGGCGTTTTCA
AACCTTTATCTTTTCTCTGTAATCACTTTCCACTACTTGTTAACCATATG
ATTCTTTGAGAACCTCTCAGGCCTTTTTTTTGCCCAAAACGTGACCCCTC
TTTTCCTCCTACTTTAGTCCCTATTGATTTCGGGTTGTTGCACATATCTT
TCTCCAACAGAAACCAAACGCCTATTCCTGGCAGGGGCGCCTCAACACAC
AACAGTAGTCCCCGCTCTCTGCCAAGTCTCATCTTCCATCTCGAACGTTT
GATCAGTCACGGCCGTCAACCTTGTTGACCGAATCCATACAAAACACCCC
TTCATCAACAAATAGCAATCGTGCGTTTTGGTCACATCCAACCCGACATC
ACCACACACGGTGCACGGCAGTATCGACAGGAACAAGAGATATGGCATCG
CAGCAGTATCGCTTTTGTTCCCCCTGCTGGCAGCAGCAGAGAGAGGCCTA
CAGACCAGGGTGGGCGGTGCTTCAGCACAGCAGGCAGGCGAACAAATGCG
GACAGTTTTGATTTTTTTTTTCGATTTTTCATCAGAGACAACGACAGGGG
AGCCCAATCCATACCCATCGCTTTCGGCCAAGTAGAGAGCTCCTCCTCTA
CAGGTCGCGGCTTCTCATATTTACATATCACAAAGGTCGTGCGCGTGAGG
TTTTCGGACCGAGAGCAGAAGTGGTCGCGGCGCACGCCTACGATGCGAGA
GTTGCTGTCTCTGCGCGTGCCTGGGTTGTGTTTTTTTCTTGCGAGACGTC
TGTGTGTCTCCTCGCCCAGAGGTCGCCTTTCGTGCTCCCTCCCGCCCTCG
AGCTCCGCAGACATTCCCACATTATCTGGGTTGTGTGATCAGTGTCGGCT
GTCATGTGCGGAGGTGTAGTGTTACTCTCTGTGGTGTTCTGCTATCTGCC
GGGGTGCGCGCCGATCTCTCCTCCCGTTGTTGATAATATTGTTTTACAAG
GGCCTCGGACGCGGGGGCCTGCCGCCCCCCCCGTCCTCCGGTGGCTGTAG
GATTTATGGTTTGTTGCGAGTAGTTGTTACCCTACTCGGAGGGAGTCGAC
CGTGGTTACGGTCCGGTCCGTATGTAACCCGGCATACCAAGGGTGGCGCT
ATTTGTTGTTAGGGTTTGAAGCCGAAGTCGCGAAAGGGTACGTCGCAATG
ACGTGGAAACGTGAAAGGTAAATGAAACGCCCGTAAAGATCCACCTGAAA
CGACTGAAAATTCAAGGGCTTCGGACGCGATGGCCTGCCGCCCCCCCCGT
CTTCCGGTGGTCGTAGGCGTTGGTAGTTTGTGGTGAGTATTTGTTACCCC
CGGAGGGCGACGCACGCACGCACGAAACGACATAAGATCTCGACGCGGGA
CATCTACTTAACGGACAGCAAGCAGCCGTCCAGGCTGAGATGCTACATCA
TCCGTGTTGATTCTGCTGCAGGTCTTCTCCTCTCAAATCAGTACTCTTGT
TGCGTACTGCTGTTTCCCTGCCTGCTGAACTTTACGAACCGCCCGTTCGT
GCTGAAATTTCAAAGGCCATTTCAAAACGCGGTGCTTCCAGGGTGCGCAC
ATTTATGTATGTACGTACGCGCGTAGGTAGCAGCGTAATTTCTGTCATTT
TTGCTGAAAGCAGTGTCTGCTGCTTTGACGCTGTGACAGTAAGCCCGTTC
GTGCTGAAATTTCAAAGGCCATTTCAAAACGCGGTGCTTCCAGGGTGCGC
ACATTTATGTATGTACGTACGCGCGTAGGTAGCAGCGTAATTTCTGTCAT
TTTTGCTGAAAGCAGTGTCTGCTGCTTTGACGCTGTGACAGTAACTTAGT
TCCACCACTCTTTGGCCGATGGAACATGCCAAGCTACAACAACATCAATC
CCACGCACGCACGCTCTTACTACTTGAAAGACGCGGTATTATTTTCGCGG
AGAGAGTCAGGGCTTCGGACGCGGGGGCCTGCCGCCCCCCCCCGTCCTCC
GGTGGTTGTTGGTAGTTTATCGTGAGCATTTGTTACCTCCAGAGGGCGAT
ATGACATGTTTACGGTGCGTATGTTACCCGGCATACCAAGGGTGGCGATA
TTTGTGGTGAGGTGGAGATGATGATTTATTTGCGGGTAGAGCAACCGTGG
GATATGTGGTGTTGGTTGTTATGTAGAAAGATGTTTAGCCAGAGTCGCTC
AAAACATACGTCGCAGTGAGGCGGAAAGGTGGGATTCGATGCAAACAGAC
CGCACGCACACACCCACCTGAGAAGTCTGAAAACTCAAATTTCCACTGGC
ACAGTGAATGGTGAATGCGCATTTTAGCATCCATGCTGATGGTTAACGCC
TGGGGCTCTTGCAAGTCTGAGCAACAAAATGATGATTCAAGTTTGCCGAA
GAAGACTGCTGTGAGCACAGAACAAAAACCTCAAACGAAAGTTTCAATAA
ATTTTGCAGGTAGGTTTAGTTTGCTGGGCACGCGCGCTGAGACGGGCAAC
TTCAACATACTGATTCGAGAGGTGTGAAAGATGACGCGCTGCGCTCACAG
CGGCGAACTGTTCGAGAGGGCGCTTATCTCTACTTCGAGTGTGTTGTTGT
GTAGTTTGATGGAGCGGGGGGCATGGCATGATCGTAAGATCGCGTGACTG
AAAAGAACCGTTCGTCACCCACGGAGATTTATTTATGGCGAGGTGGAGCT
AGAAAATGAAGATCTAATTTTACCGAGAGAAGACAGCGGTGAGCGCGGAA
AAAACACCTCAAACTAAAGTTTCGATAAACATCTTGTGTTTGGTTTCTGG
ATGATATTGGATCCCAGTTTTGCCCTGTGGGTTTCACGGACCTCGCCCGA
GCCGAGCGCGTACGATCAAGCCCTTGATCGACAGCATGAGATGCACGAGA
GCCACGCAGCGACCGCGCAGCGTGCGCGAACGAGGGTCGCCGCCTGTGTG
CCGGGAGAGTGGCGAAAATCGGAGCGAAACCACCCGAGCGGGGCTCTAAG
CCGCCGAAAACAATCTCTCCGCGCGTCAGAAAAGTCAGCCTTTTTGGAGC
GGACGCACGAGAGGCCAGCATGTCAAAATGCTGGCACCTCAGCGAGCGCG
CACGACGGGCGCCGAGTGTGTGTGCGTGCGGGGAGAATGTCGAAAATCGG
AGCGAAACCGCCGACAGGGGCTCGAAGCCGCCGAAAAAAGTCTCTCGGTG
CACGAGAGGCCGGCATTTCAAATGCTGCACGCTCAGCGACTCTCAGCGAC
TCAGGCGTAAAGAGTCAAATACGTGTGATATTAGTTAGATACCTCTATTG
TTTTTGCGCCAGGGTCCAGCTGGGGGAATTATATTTTTTCGCACCAAGCG
CAAAAAACATAAAAATAATCTAAATAGGCGTTTGCGTTTGCTGTGTACAC
GTACCTCTTGACGCTCTAACTCGGAGAGGGTGTATTCGATTTCCAAACGG
GTTTTTGCATAGTGACCCCTTGAACCTCCAGGATTCCCGTGAACCCTCCA
TTGCTGTCACCTTTTCTCCCACGTAACATATAGCTCCCCCTCAACGCCTG
CGAAACTCAGAGAGAGCGGCTCATCCTGCGGGCCTAATGAAATCTGCGAA
TGAATCAAGTAAAACAACGTCTTTCGGGCTCGAACGATTTGTGACTTCTG
AGTCAAGTACTACAGTCCTGGTGCGATACACGAGAGCTTCACTGCCGTTC
ATCCTGCATGGTTTTCAATTCCGTCCTTCTTCTACCTATCTATCCGTCCT
CTCGTACCTACTTGTAGCCCTCTCATGATTTTCATCGAGGCCGTCTGAAC
GTCAGAGAGTCTGTTTCTTGTGAAAAAACGGAGAGAAAATTGGAAGCGCG
ATGCCACGCAGAGCAATTTATTTTTTAGGGAAGCGGCCAAATGGTGGTAC
GTCTCCAGGGAGCATTAACGGTGCTCCGATGGCATGCATGATGAATCGTC
GAAAGACGAAGCAACCCACAAAATAGTACGCCCCCTCGTAGAATATTTCC
TGAAAAAAGCTTCAGGGACCTGCATCGATGGTTTCGGGCCGACCCTGTCA
TTTTTCGAGCTACGAAACCACGTGAGGTTTCCTTCTTCGGTATTTCGGCC
TACACAGCCGGCTCCGTTCGGATTTTTGTGTATGCACACATATTGGTTTT
AGTGCGCCTTTGTGAAGACCGCATACTTCCTCTGTCCCATAAGTCTGGGC
TGTTGTGAATGCGCAGTCGTTAGGGTACTTACACGTTGCCGTTTAGCCTT
TGGCCGGGTGCGTTAGAAAGGCAAAACACATACAAAGCTGACTAAAGATA
AAATAAAAAAATCGAAGACCGTGTTATACACTAAAATTAGGTCAAAACAT
GCCCATTTTGGCCCTTTTTGAGAATGTTTTACCATATTTTACATCAACAG
ACGTTTTTTGCCCGCAAGTGTCTTGGTTTTAGTGTGGTCCCCCCAAATGT
CTTGGTTTTAATGTGTAACCCCAAGTGTCTTAGTTTTAGTGTGGGGTCAC
TATTATACTGGTTTGAGTATAGGGGGACGCGACATGGATCGTTGATTAGA
GGGGGGGTTGGGTTCGGGCCCTACTCTGTTGTTTTTTTTGCCCCGCAAGT
GTAATGGTTTTAGTGTGGGACCCCCAAGTGTCTTGGTTATAGTGTGGGAC
CACCGAGTGTCTTGGGTTTAGTGTGAGGTCCTTATTTTACTGGTTTTAGT
ATAGGGGGACGCGACATGGATCGTCTAGTAGAGGGGGGTTGGGTATTGCC
CTACTGCTGTTCCTTTGCCCCGCAAGTGTCTTGGTTTTTGTGTGGGCCCC
CCAAGTGTACTGGTTTTAGTGTTGGACCTTAGTGTCTTGGTTTTTGTGTG
GGAGCCACTATTATACTGGTTTTAGCATAGGGGGACGCGACATGGATGTT
TGAGGAGAGGGAGGGTTAGCCTTGGGGTTGGGGAGAATTCTTTTTTTTCT
GGGGGGGGTTAGGCTTAGTGCCCCACCCACCCACCTCCTGGAAAGGGGCA
AAATATGGCCGTTTTTGGGCCGACTCAATGTTTTCTGGCCGTTCCGCCGC
ATGGTTCAAGCACCAGCGTAAAAAAAAAAAAGTTTTTCTTGCTAAAAAAA
CGCCGGAGAATTCAACAAAAAAATCGGAAAACAGATCGGACACCGTTAAG
GGGGCGCAAAAACATAACAGCCCAGACTTATGGGACAGAGGAAGTATGTA
CACTTCAATTTTGCCATCTTTCAGCACAAAAAATTGCGACCCGTTTGTTT
TTTTCCCGCCGTTTGGCAGGCGGGGCGCAAGTTCATAATTTTGCGCGCAA
GGACGGGTGCTATTCTCTGCGTCGACCAGCATGCGGCCGATGAACGAATA
AAACTGGAGGAGCTCGAACGTCAG GTGCGGCCTTGCTTTCGTTAATCTTG
ACGTACGACTGCAGCCTGTGAGGCGTCTGCAACTCGTCGTCCAGCTTCGT
GGTCGAGTTGGCGCGAACCCTTCTTTTGTTCCCGATCACCAATACTTGCA
ACCGTTCGTTCCGAACGATGTCGCTGTTTAGGTGTTCGGTGAAGACGGGG
ATAGGCGCAACGTGGAGGTTCTTCACCTGGACCCTCCAGAGAGCATATCA
ATCACACAGTCGGACGCATCTCTGCTCCAGCTCCACCAAGAG GTATGTCT
GTGATCCTGTTACATAGGGTTGCTTCCCCAAGACGTTGCGGCCAGGCGGT
CATGAGGGCCCAGCCCTCTGAGACACGAATCGGTATCATATTTCTTCTCC
CTTGACGACCTGTACGTCTTACAAACAGTCCATCCAACGGCGTCTAAGGA
GCTGTGTGTGAGTTCCCAAGACGCCAGATGCACGGATGGTCACCTGCCCG
CCCCCACTCTCCTAAAACATAGTTTCCCCAGGTTAATTATCTTTTGGGTA
ATTACTGGTGCAAGACTGGCGTAGGTAATATGACATATCCGATTTGTTTC
ACTCACGCCCCCTCCCTACAGTGGTCGTTGTTGTACACGAAACCGTCAGC
TCGCATCGCTCGAAGCGGCTCGGCCTCGGTGGCAAGTTTTTGCCGGCAAT
ATCTCCGGTTCTTTGTATGGATGCGCATGATTTAACCTGGGGCTCGCCGA
TCGTGATACAGGTGCTGTCCTCTTGGAAGTTCGAGTTTGTGGTGGAGCAG
GCGCAGGGAATTTCAGGGTGTGCGCCAACCGCAACTTTGGTGTCTGTGCC
AGTGGTATGCGGAGTTCGGCTTTCGGTTCAG GTACGAAGAGTGCTGGCAA
TCAAAGCATTCTGCTGGCAAGTTGCGAATTCGGCATGCACAAACAAGGGG
ATAGCGGCGACCACGTACGTGGTGGTCTTGCCTACCCTGGTGATTTCGCC
CGAAGTAAGGCTTTGAGGCGCGATTTATGGTTCTGTTCTCCGAGCCGCGT
CTATTTGCTAGGGTGTATACTCCTAGTTCACAAGGTGAAATGGTTTCTGT
TCCCGATTGAAAAATTCCGATTGCTTTTTTTTGCGACTTTTTTCTTGCGA
TTTTTTCTTGTTATAACCCTGTTGATTGTGATCGCTCTGTAGACATTTCG
GCACACAAAAGCCGCGGGCGCGAAATTCAGGCGGGGCCTTCTTCCTTACG
AGTTCTCGCCTTCTGTGCAGCAGAATCTCGATCGCGGCTGCACGGGCGTA
GAAAACGGCTTCTGCACATGCCTGCCACACTAACTTTCAGTTCAAAACTT
GGTTGATTTGTACGCTTTTTTTTCGATGATTAGATGCGTTTTTCCCTGTC
CTACAGCGCGCCACACACTAACAAGCAGACAAATCTTTGTCCTGACTGAT
GAGGAGTGCGCACACCCGGCACCACCGCTGTTTTTTTTTTATCTGAGCGC
GCGATTGATCAACTTTTATCCTTCGCCAGACACGCAAGCAGAGAGCTCTT
CTCCTACACAACCCCCGGCTTTCCCTATCTACATATCATAGAGGTTGGTC
GCGTGAGTTTGTCAGTTCGCGAGAAGACGTGGTCGCCACATACTTCCAAT
CGGCGAGACGTCGAGTTGCTTTGGTGTGTCCTGTCTCGGAGAGGGAGCAG
TCTTCTCGGAGAGCATTTTTTTTTTCAAATTTGGGCGCCCGAGTGACCAA
CTTGTGTCCTTCGCCAAACACGCAGGCAGCGCGCCCACCCGCCCGAGTGA
GTGAGGTGGTCTATCAAGCTCTCTCGCTCTCTTGATCTCCTGCTCTGTCG
CTGGGCCGTATGCAACCGCGTGCTGAGGGAGGTTAGAGAGGACGGATGGA
CCAATAAAAATAAAAATAAAAGGATTTTTGAAATATTTTTGAATTTCATC
TGAAGTCTCTCCACATAGCAACATAATCTGCACCTGCACCCACGAGAAGA
CGAGTCCGGATGCAGGGTAATCAAGCTTGCCCCACTCGCATACGTAACAA
CGCGGAGCCTTTACCCCGAGGGGGTAGATCTATCGATATGAACATTATTC
GTACACACACACTTTATAAAGGGAGCGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGACAGAGTTTCAAATTTCAAATTTGCTTGAAGATTAAC
CCGGAGTAATCAACACTGAGGACAACCAAGCGGACACACAGACCCAGCCA
AAGTACGTACAACACACCAATACGCCCGAGTGAGTGAGGTGGTCTATCAA
GCTAGAATTTCGAAGCGTTCTGTGCTGATGTGTGTCCGTTGCTGGTAAGA
TGCCTTCGGGACAGGTGGTCAATCCCATCGGAAAATATCCTTGTCCTGCC
AAGCTACAGCGCTTTTTTATCTGAGTTTTATCTGAGCGCGCGAGATTGTT
CGCGTACGGTTGTCAGATCGCGAGAGGACGTGGTCGCCACATGCATGCTT
CCAATTAGCGAGACGCAGAGTTGTGTGTCTCGGAGAGGGAGCCGTCTGAG
CTTTTTTTTTCATTTTAATCTGCGCACGCGAGTGGCCAAATTGTATCCTT
CGCCAGACACGCAAGCAGCGCGCCCACCCGACCGAGTGAGTGAGGTAGTC
TATCAATCGAGAAGTAGCACGTTGGACCGTTGTGGACGGATGTGGTTGTT
CCAGACACGCAAGCAGAGAGCTCTTCTCCTCACGACCCCCGGCTTTCCCT
ACCGTGTTATGTTTTTTTAAGTCTTCTTCCCTCTCGGAGAATATAAGCAT
CTCGCACAACAGCTAGGTGTGTTTTCACGTGCCCAGGGCCTTCCAATTTC
AATTTATTAGGAGGTGGGTTTGCCAAGAGGAGGGTGTGTGTGCGTTGTTG
CTCTGCACTCTGCTGTCGAGCAGAGAACGTTTTGTGGACTGATGTGGTTG
ATGTTGTTAAACGAAGACACAAGATGACGGTCAACCGGTTGGTATATTTA
TTTGATGCACCCCGTCGCTTCGCGCTCTTGGTTGAAACAGCCAAAAGCTA
CATCGCGCGCCCACCCGGCCGAGTGAGTGAGGTGGTCTATCAAGCGATAA
GTGGGAAGCGTTGTGTGCTGAAGTGTGTCCGTACTTGAAACACACATCAG
TAGGACTACTCTCTACTTTCACCACCACACCGCCACCACCACCACCCCAG
TTTTCACTTCCAAGGCACAAAATGTAACCGACTGCCGAGAGACCCCAATC
CTTGCCGCTACGTACCGTTAATCGAGTTGGCGGGGTCGCAAAGTCAGACA
ACAGGTGGCTCTATAATATGCTTTCGCGACAGGCGGTCAGTCTCATCGAT
CACAACAAATCACGGAAAGTTTTTTTTTTTTCAAGTTTGTGTCGAGTGTA
CAGCCATACATCGGGTGGTGAGTGTGTTGTCGGCCTCCCCCCCTTCGCAA
AGCCTACTACCTCGTTCTGATGATAAATTGAAATAGGAAGTGCCCCGGAC
ACAGGTCCAGGGCAAATCTATTACTTCGTATGATATCTAGTTGTCCTTTT
CGAGAGAAGAGTGTACCGCATATACGGAGTAGAATAAAGACCACCCACCT
GAGTACGAGCGCGTGTGCTCTGGATGGAGGATGTGCTTGACCTGGTTGAA
ATGTTGCAACAGGAGGCTAGGTAGGTTTGATGCTTCCACAGCATAGCGTC
GAGGAGCCCCCCCCCTCCCCGTAGCTCTCGCAGGCCCGTTGCCTTGAATT
TGAAATGTTTTGCGAGGATTTCTTGCGCACCCGAACCGTCCCTGGTTGAT
CTCTCCGTTTACTTTTCCCCCTTCAGGACCTAGTGAGCTTCTTGACCTAC
TTGCGCGAGAGCATGGAGCCCGGGTCGCTGGCGGGTAAACCTCCCCAGAT
CCAGCACATCCTAAATTACAAGGCGTGCCACGGCGCCATCAG GTACATGG
TATCTGTGGTGCCATGTCAGGAGCATACCGTTGGCTCTTCAGAGTCAGGT
TTGATTTCGCATGCAGGCTCGGGTAAGGCAACGGCATGCTCATCGCTCTG
TTTTTCTATCTAGATGATTGGAGTTGTGTGCGCGCGGATCCAACTTTCCT
ACCCCTTTCCGAACATGGCCATATTATTATCTCAGGTTCGGAGACCTGCT
ATCGCGCTCGGAATCTCTCGAGTTGGTCCGCCAGCTAGCGGCCTGCGCCC
ACCCGTTTGTCTGTGCCCACGGACGCCCAAGCGTGGTTCCTCTTTGTGTT
GTAGGGGGAACTTTGCCATCATCAAAGGCCCTAAAAGGACCGCCGGGAAG
GGGCAGGTGGGCTGCAACCGGCAGGGGCAGGAAGAAGTTGCCGACTTCTG
CCGAGGGGCCGCAATAA GCACGTCATCCGTTCTACGTCGAAAATTGCTGG
CGGCCGCGCGAACTTGAAAATCTCGCTCATACTGCTGCATTTTGTAGAGT
TGTTCGATGTTGCGTTGCAGATCGCGTTCTGTTTGTTCGATACCGCCTGA
GGAGCCCCACCCCTGCTCTGAGCTACCCGGCTAAAACAAGTAACCGGCAA
TTGTCCAAAATGAAGGGGGTTTGGCTAATTACGTAATTACTCTATGGAGA
CAACCGGCCGAAATGTGGGCTGCAACGGTAGTGCTGCACATGCCATAGTA
CACAGATCCACCAAACGTGAAACATCACGACTGCTGTGAGAAGGACACTG
CGGAGCCAGATGGGCCAAGCTGTGTAATGTCCACAAGCGGTTCAGCCATA
CTTCCAAGCTGGTTTACCGCAGGAACCAAGTAACACATCTGCCGCACCCC
GCTAAAAACGCAATTGACAAACGCGAAAAGCGTGCCTCAAGCTAGCTCGC
AGACAAGTACACCCACGCGCG back to top Coding sequence (CDS) from alignment at C-linearis_contig101:571177..589247+
>mRNA_C-linearis_contig101.761.1 ID=mRNA_C-linearis_contig101.761.1|Name=mRNA_C-linearis_contig101.761.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=8064bp|location=Sequence derived from alignment at C-linearis_contig101:571177..589247+ (Chordaria linearis ClinC8C monoicous) back to top