Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 173 |
| Cds size | 171 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927358.9340346-CDS-C-linearis_contig101:395424..395518 | 1622927358.9340346-CDS-C-linearis_contig101:395424..395518 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 395425..395518 - |
| 1690879651.1766648-CDS-C-linearis_contig101:395424..395518 | 1690879651.1766648-CDS-C-linearis_contig101:395424..395518 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 395425..395518 - |
| 1622927358.9482157-CDS-C-linearis_contig101:395887..395964 | 1622927358.9482157-CDS-C-linearis_contig101:395887..395964 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 395888..395964 - |
| 1690879651.1863298-CDS-C-linearis_contig101:395887..395964 | 1690879651.1863298-CDS-C-linearis_contig101:395887..395964 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 395888..395964 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.746.1 >prot_C-linearis_contig101.746.1 ID=prot_C-linearis_contig101.746.1|Name=mRNA_C-linearis_contig101.746.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=57bp
RPSSWTWRWAPSRSGSLGTVPRATSRVYEQAFGQRKDKGKEDSTKKKQKT
TETGDWG back to topmRNA from alignment at C-linearis_contig101:395424..395964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig101.746.1 ID=mRNA_C-linearis_contig101.746.1|Name=mRNA_C-linearis_contig101.746.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=541bp|location=Sequence derived from alignment at C-linearis_contig101:395424..395964- (Chordaria linearis ClinC8C monoicous)
CGGCCGAGTTCCTGGACGTGGCGGTGGGCTCCATCAAGAAGTGGGAGCTT
GGGTACCGTACCAAGGGCCACATCGCGGTGAGAGCAATGATTTCTAAGTC
GCGTGAGCATACGACTCTTAGGTGGGTCTTTGTACAGCAGTGGGCAACGT
ACACATGCATTTGATGGTGAGGTGTGTGATGTACAAAACCCGACACAACT
TGAAAAACACAGCAGTTTTGATTTTAATCCTGCCTCTCTCCTCGCGCGCT
TTCTCTGATATGTGTGTCACTTCCCCACGTTCTTGGCAAGCACTCTGTTG
TGTTTTCGTTTTACAGTAGGGTGGCGATAATTTTTCAAAGAAAAAGAACA
CCCCGGGGCGAAAACACCCCGGGGCGTGGTCTAATTTTTCACACATTTTC
ACTCACACACAAGTTTGGCAAAACACGCGATGTCGGGCCTCGGTAGTGTC
TACGAGCAAGCTTTCGGGCAGAGGAAGGATAAGGGCAAGGAGGATTCTAC
CAAGAAGAAGCAGAAGACGACCGAGACGGGCGATTGGGGAT back to topCoding sequence (CDS) from alignment at C-linearis_contig101:395424..395964- >mRNA_C-linearis_contig101.746.1 ID=mRNA_C-linearis_contig101.746.1|Name=mRNA_C-linearis_contig101.746.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=342bp|location=Sequence derived from alignment at C-linearis_contig101:395424..395964- (Chordaria linearis ClinC8C monoicous)
CGGCCGAGTTCCTGGACGTGGCGGTGGGCTCCATCAAGAAGTGGGAGCTT
GGGTACCGTACCAAGGGCCACATCGCGCGGCCGAGTTCCTGGACGTGGCG
GTGGGCTCCATCAAGAAGTGGGAGCTTGGGTACCGTACCAAGGGCCACAT
CGCGTGTCTACGAGCAAGCTTTCGGGCAGAGGAAGGATAAGGGCAAGGAG
GATTCTACCAAGAAGAAGCAGAAGACGACCGAGACGGGCGATTGGGGATG
TCTACGAGCAAGCTTTCGGGCAGAGGAAGGATAAGGGCAAGGAGGATTCT
ACCAAGAAGAAGCAGAAGACGACCGAGACGGGCGATTGGGGA back to top
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