Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 576 |
| Cds size | 573 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927358.5947905-CDS-C-linearis_contig101:172322..172778 | 1622927358.5947905-CDS-C-linearis_contig101:172322..172778 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 172323..172778 - |
| 1690879650.9383688-CDS-C-linearis_contig101:172322..172778 | 1690879650.9383688-CDS-C-linearis_contig101:172322..172778 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 172323..172778 - |
| 1622927358.6123812-CDS-C-linearis_contig101:173613..173730 | 1622927358.6123812-CDS-C-linearis_contig101:173613..173730 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 173614..173730 - |
| 1690879650.9488542-CDS-C-linearis_contig101:173613..173730 | 1690879650.9488542-CDS-C-linearis_contig101:173613..173730 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 173614..173730 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.726.1 >prot_C-linearis_contig101.726.1 ID=prot_C-linearis_contig101.726.1|Name=mRNA_C-linearis_contig101.726.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=191bp
SPTHAGDKPKCRAARSNGRASGDSSTPGSIGRVLCCINLNSRQERKNFSL
ASGPPSRRLHLLCGLSPVLQKMSPSPPRPRRSSSPSRRASSPPRRRRPST
SPPQPSPRQPRPAPIMTAAVTGEAAAASGGGGGDDCDGNKTLSNVNVTGE
YGGSSGGGVEAWTSRKRRDSPCAGGSRNVMDVDMGMEVEGG back to topmRNA from alignment at C-linearis_contig101:172322..173730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig101.726.1 ID=mRNA_C-linearis_contig101.726.1|Name=mRNA_C-linearis_contig101.726.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1409bp|location=Sequence derived from alignment at C-linearis_contig101:172322..173730- (Chordaria linearis ClinC8C monoicous)
AGCCCCACGCACGCTGGTGACAAACCCAAGTGCCGGGCTGCACGAAGCAA
CGGAAGAGCTTCAGGTGATTCTTCCACTCCTGGTTCGATCGGCCGCGTGC
TCTGCTGCATTAATCTAGTGAGTGTCGACGAGTATACCAAACGCTCCTTT
GAATTTGAACTCGCGGTAGTCTGTATGTAGACTATGGTATATCCGGGATC
TCCAGCTCCCGGAGCAGAGAGTTGTTCGCTGGTACGGGCGGGCGCAGACA
GCATCGGATACGCGTTTTCTCTTCAAGACCATATTGCGTTCCTCTTACAT
TTTTTGGTGTACCTACACATGGTGTTTTTGTAGTGAACCTACAACAGGCA
GAGAACATGATTAATCCGGAGAAAAAGAGAGAGCGTGGTTGGGTGTCCGA
AAATCAACAACGGGCGGTCACGGGTGGGTGCGTGTTATGTTCCTGGTGAT
CCCTTTATCGGACGCCAGGAGCACACAGATGCGAACACAGTGTTCACGGC
CTGACGGTGCCTCGGTGGTTCGACCGCAGGGTCGTTTGTCATGTTCCTTC
ATTGACTCTAGACTATTGTACTCTGTTAATTCCTTCGCTGGAACTGGAAC
ACACGGCACCGAAGTTGCTGACTGCCCGAAAGCCAGACCACGGCCGCCGC
GTAAGAAGTACGGCCATCCTCCTTTTAGCACCAGCAGCATTTTTGCTATC
GAAAGCTATTGCCCCACCCCGACCTCTCCGTTGTCTGGGATAAACTTTTG
AACCACTCTCTGGGTCTCTAGTAACCTCTCCAGGTTTGCCAGAGTACGAG
TCACGAACACCCTTCCCTCGCCTTCTTTTCGACCGTGGAAAAGACATCAT
GTGGACGAATCACGATTGACTCCCCCGCACCATCCCCTCCCTTCCCCCCT
TCCCCGCCGGCGCTGAACTAAATCGAACCACTGCTGCTGTACGTTGAAAC
AGAACAGCAGGCAAGAGAGGAAAAATTTCAGTCTCGCTTCCGGCCCGCCA
TCGCGTCGGTTGCACCTCCTCTGTGGGCTCTCCCCCGTTCTGCAGAAAAT
GTCACCATCCCCGCCCCGCCCCCGTCGGTCTTCTTCCCCTTCCCGGCGGG
CGTCTTCCCCCCCGCGCCGCCGCCGGCCGTCGACATCGCCGCCGCAGCCT
TCTCCACGACAACCTCGGCCCGCTCCCATAATGACTGCTGCTGTCACTGG
AGAAGCAGCAGCGGCCAGCGGCGGCGGCGGCGGTGACGACTGCGACGGCA
ACAAGACCCTCTCCAACGTCAACGTTACCGGCGAATACGGCGGCAGCAGC
GGCGGTGGCGTCGAAGCCTGGACGAGCAGGAAACGGCGGGACTCGCCCTG
CGCTGGTGGCAGCCGGAACGTGATGGACGTGGACATGGGCATGGAAGTCG
AGGGAGGGC back to topCoding sequence (CDS) from alignment at C-linearis_contig101:172322..173730- >mRNA_C-linearis_contig101.726.1 ID=mRNA_C-linearis_contig101.726.1|Name=mRNA_C-linearis_contig101.726.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1146bp|location=Sequence derived from alignment at C-linearis_contig101:172322..173730- (Chordaria linearis ClinC8C monoicous)
AGCCCCACGCACGCTGGTGACAAACCCAAGTGCCGGGCTGCACGAAGCAA
CGGAAGAGCTTCAGGTGATTCTTCCACTCCTGGTTCGATCGGCCGCGTGC
TCTGCTGCATTAATCTAAGCCCCACGCACGCTGGTGACAAACCCAAGTGC
CGGGCTGCACGAAGCAACGGAAGAGCTTCAGGTGATTCTTCCACTCCTGG
TTCGATCGGCCGCGTGCTCTGCTGCATTAATCTAAACAGCAGGCAAGAGA
GGAAAAATTTCAGTCTCGCTTCCGGCCCGCCATCGCGTCGGTTGCACCTC
CTCTGTGGGCTCTCCCCCGTTCTGCAGAAAATGTCACCATCCCCGCCCCG
CCCCCGTCGGTCTTCTTCCCCTTCCCGGCGGGCGTCTTCCCCCCCGCGCC
GCCGCCGGCCGTCGACATCGCCGCCGCAGCCTTCTCCACGACAACCTCGG
CCCGCTCCCATAATGACTGCTGCTGTCACTGGAGAAGCAGCAGCGGCCAG
CGGCGGCGGCGGCGGTGACGACTGCGACGGCAACAAGACCCTCTCCAACG
TCAACGTTACCGGCGAATACGGCGGCAGCAGCGGCGGTGGCGTCGAAGCC
TGGACGAGCAGGAAACGGCGGGACTCGCCCTGCGCTGGTGGCAGCCGGAA
CGTGATGGACGTGGACATGGGCATGGAAGTCGAGGGAGGGAACAGCAGGC
AAGAGAGGAAAAATTTCAGTCTCGCTTCCGGCCCGCCATCGCGTCGGTTG
CACCTCCTCTGTGGGCTCTCCCCCGTTCTGCAGAAAATGTCACCATCCCC
GCCCCGCCCCCGTCGGTCTTCTTCCCCTTCCCGGCGGGCGTCTTCCCCCC
CGCGCCGCCGCCGGCCGTCGACATCGCCGCCGCAGCCTTCTCCACGACAA
CCTCGGCCCGCTCCCATAATGACTGCTGCTGTCACTGGAGAAGCAGCAGC
GGCCAGCGGCGGCGGCGGCGGTGACGACTGCGACGGCAACAAGACCCTCT
CCAACGTCAACGTTACCGGCGAATACGGCGGCAGCAGCGGCGGTGGCGTC
GAAGCCTGGACGAGCAGGAAACGGCGGGACTCGCCCTGCGCTGGTGGCAG
CCGGAACGTGATGGACGTGGACATGGGCATGGAAGTCGAGGGAGGG back to top
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