mRNA_C-linearis_contig101.725.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A6H5JJZ7_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ7_9PHAE) HSP 1 Score: 708 bits (1827), Expect = 1.230e-233 Identity = 461/727 (63.41%), Postives = 505/727 (69.46%), Query Frame = 3 Query: 537 AREKCTLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRSGEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGTEEERFDDNA-NIVNVSLSALGPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALVDCCSSGRVVSVLEGGYSLEARVSRAKAAQQARANMKRTAKPETAAVASAGVGGQASGTSARP-------ALRERRSRPATRGSAPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----RSD------VINTILPALPVEVELTTSSLSSPPC--------------PSEQMLGDVLRTTTSTXXXXXAVTVGAGDAGIGVVGGAAAPLQAGLRVNGGNKSNSSNSSIGGGAVKKASRKVKVSALTATLVKDEG-DAVLRAGDGGLVRGVVSHVSALMRSASSGQKQHK 2615 A E+ TLVVYPPECLLHMGV+D ENHQE P+RL+LLCGE+GALRR TFQGLEWVDPS + PALITDLLRVHEYDYL ERCAGAPPS TP G D + G N XXXXXXXX R +G+RF AD GYVDVDTRVSRESYGAAR AAGAVILAVDRVVQG NPNAFVAVRPPGHHAGPSGSVP+ SFWKNPGMNSSGFCLLN+AAIGAAYAR RYGRSGE+SRVAIVDIDIHHGNGTEE+VRCLRPM TRLPLPPSWPPMTKTVYKPWLD+ DADNVFFGSVSLQDKDLFYPASGTE+ERF+DN NIVNVSLS LGP PGDE KKRALTKTK++E TNKA NEFK+KCQ TLLARLK+FSPDLLIISAGFDGHVEDYYHYLSNE+YEW+TLAL DCC +GRVVSVLEGGYSLEAR+SRAKAAQQARAN KR KPETAA ALRERR+RPATRGS XXXXXXXXXXXXXXXXXXX ++D +++T+ A+P + LSS P PS+Q G T+S A +V D + V A + +G+ IG G KK SRKV V A K EG DA +RA DGGLVRGVVSHVSALM AS Q++ + Sbjct: 322 ATERRTLVVYPPECLLHMGVEDHENHQEKPKRLDLLCGEQGALRRTTFQGLEWVDPSFVEPALITDLLRVHEYDYL----ERCAGAPPSSTPL---GPDTAAVDHHLRHHGR----------NQLPXXXXXXXXXXXXXXXXXAAGDGRG---GFGRRFEADVGYVDVDTRVSRESYGAARTAAGAVILAVDRVVQGKNPNAFVAVRPPGHHAGPSGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMNTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEDERFNDNDDNIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARMSRAKAAQQARANNKRAYKPETAAXXXXXXXXXXXXXXXXXXXXXXXXALRERRNRPATRGSXXXXXXXXXXXXXXXXXXXXXXXAASFPQPHSSSVGAPGTGNKADSKAAGAMLHTVPAAVPTAAGVPL--LSSAPAGSNTIATMGASSLSPSDQRPGGCFGATSS-----GASSVVGEDPAVPVAVVCGASVSSGV------------GGIGDGNRKKTSRKVPVVAAA----KGEGEDAAIRAWDGGLVRGVVSHVSALMTCASRQQQEQQ 1005
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: D8LN83_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN83_ECTSI) HSP 1 Score: 645 bits (1665), Expect = 7.510e-209 Identity = 501/1053 (47.58%), Postives = 554/1053 (52.61%), Query Frame = 3 Query: 3 DITSFSPYAARLGSG-----TSPGDDVGRTAARLEGLSFEHENGXXXXXXXXXXXXXXXXXXREEPSLQSPAKKYQGD----KGNAPSAASASGV-GVARRMQFFHEGDAPAAPQPLQLLSLPXXXXXVGESLEIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAREKCTLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQG-LEWVDPSLIAPALITDLLRVHEYDYLVHIQ-------------------ERCAGAPPSGTPSSNP------------------GDDN----------------------------------------------NVN----------------------------------------GKKIGTMGTTAPSTTTAP-------------------TNDTQLAATTTEKAXXXXXXXXXXXXXR------HEQEE--------YGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRSGEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGTEEERFDDN-ANIVNVSLSALGPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALVDCCSSGRVVSVLEGGYSLEARVSRAKAAQQARANMKRTAKPETAAVASAGVGGQASGTSAR------PALRERRSRPATRGSAPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSDVIN--------TILPALPVEVELTTSS--LSSPPCPSEQMLGDVLRTTTSTXXXXXAVTVGAGDAGIGVVGGA--AAPLQA--GLRVNGGNKSNSSNSSIGGGAVKKASRKVKVSALTATLVKDEG-DAVLRAGDGGLVRGVVSHVSALMRSAS 2594 DI SFSPYAARLG G SPGD+VGR ARL GL FEH +G +E +++SPAKK+ D + ++ S A GV GVARR GV+D ENHQE P+RLELLCGE+GALRR TFQG LEWVDPS I PALITDLLRVHEYDYLVHIQ E G+ +G P +P GD+N NV+ G +P + P ++ Q A+ R ++EE +G+RF AD GYVDVDTRVSRESYGAAR AAGAVILAVDRVVQG NPNAFVAVRPPGHHAGPSGS P+ SFWKNPGMNSSGFCLLN+AAIGAAYAR RYGRSGE+SRVAIVDIDIHHGNGTEE+VRCLRPMTTRLPLPPSWPPMTKTVYKPWLD+ DADNVFFGSVSLQDKDLFYPASGTEEERF+DN ANIVNVSLS LGP PGDE KKRALTKTK++E TNKA NEFK+KCQ TLLARLK+FSPDLLIISAGFDGHVEDYYHYLSNE+YEW+TLAL DCC +GRVVSVLEGGYSLEARVSRAKAAQQARAN KR KPETAA PALRERR+RPATRGS XXXXXXXXXXXXXXXXXXXXXX G N +L +P V + LSS P S + V ++ S GA +G V G A P+ G V+ G +GGG KKASRKV V+A A K EG DA +RA DGGLVRGVVSHVSALM AS Sbjct: 136 DIASFSPYAARLGWGGSGSTNSPGDEVGRATARLAGLQFEHGDGDDGDD--------------QEWAMESPAKKHHHDHDTYRKDSASPAPTGGVSGVARR---------------------------------------------------------------------------------------------------------GVEDHENHQEKPKRLELLCGEQGALRRTTFQGGLEWVDPSFIQPALITDLLRVHEYDYLVHIQGAVVYALGLLGNASLSALEEYRKGSAANGFPPPSPXXXXXXXXXXXRLSGGGDGDENLFASDPFQYASNAEVEAYAPEPQSMCGDPPCFTGWPINIHESRGEQNVSLRNPWTKARSRSSRGGEGAPHMLLSFGSHASISALEEYRKGSAANGFPPPSPXXSGGPQTSGDRLNGGGDGDENLFASDPFQYASNAEPPETDAWGFQEAVENGRPSIRPSKKKEEAAGDARGGFGRRFEADVGYVDVDTRVSRESYGAARTAAGAVILAVDRVVQGKNPNAFVAVRPPGHHAGPSGSAPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEEERFNDNDANIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQARANNKRANKPETAAXXXXXXXXXXXXXXXXXXXXXXPALRERRNRPATRGSXXXXXXXXXXXXXXXXXXXXXXXXXXFPPQPHSSSVGAPGAGNQADSKSAAAMLHTVPAAVRTAAGAPLLSSAPAGSNTIAA-VGASSLSPSDKPPGGGFGATGSGASSVVGEDPAVPVAVVCGPPVSSG---------VGGGNRKKASRKVPVAASAA---KGEGEDAAIRAWDGGLVRGVVSHVSALMTCAS 1056
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A836CER0_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER0_9STRA) HSP 1 Score: 343 bits (881), Expect = 1.780e-99 Identity = 212/517 (41.01%), Postives = 270/517 (52.22%), Query Frame = 3 Query: 546 KCTLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRSGEVS-----RVAIVDIDIHHGNGTEEM----------------VRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGTEEERFDDN-------ANIVNVSLSALGP-PPGD---EAKKRALTKTKLSELTNKAGN----------------------------------EFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALVDCCSSG--RVVSVLEGGYSLEAR 1892 K TL++Y P+CL H+ +E+HQE P R++ LCG GAL F L+W D + PA ++DLLRVHEYDY+ +Q +C A Q +AT KA R G + + GY+D DT ++ +S+ AR AAGAVI AVDRV+ G N NAFV VRPPGHHAGPSGSVP +FW+NP MNSSGFCL+N+ A+GAAYA +RYGR G+ + RVAIVD DIH GNGTE++ VR LRP RLPLPPSWPP YKPWLDE DA+NV F S++L FYPASG D +I+N +L+ +G PGD A+ + T TN A + + C+ LL RL F+PD+L +SAGFDGH ED YH+ +N+ Y W+T L++C ++G RVVSVLEGGYSL R Sbjct: 193 KPTLLLYVPDCLEHVAWATREHHQECPARMDALCGPAGALHGPAFAALQWGDGAAARPATMSDLLRVHEYDYIALLQAKCEEAAKF-----------------------------------EQRSATDAGKAADPAALGGTRGVDRGAAG--GAEWGSPPGYLDADTLITAKSFAVARKAAGAVIEAVDRVMSGANKNAFVVVRPPGHHAGPSGSVPGPNFWRNPDMNSSGFCLVNNVAVGAAYAMARYGRGGQGASGGRFRVAIVDFDIHQGNGTEDIHXXXXXXXXXXXXXXIVRSLRPRRRRLPLPPSWPPAFAATYKPWLDEDDAENVMFASINLVQGHDFYPASGHASAGGGDGDGDELHGGHIINAALAPVGGVAPGDLPPRARLAQVHNTSQQPQTNSAXXXXXXXXXXXXXXXXXXXXXXXPARAAKLRALASLQLRASCEEALLPRLAAFAPDVLFVSAGFDGHHEDMYHWNTNDDYAWLTRRLMECAAAGGGRVVSVLEGGYSLAPR 672
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A8K1C2K1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K1_PYTOL) HSP 1 Score: 333 bits (853), Expect = 6.520e-96 Identity = 196/470 (41.70%), Postives = 259/470 (55.11%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRY------------------GRSGEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGT----EEERFDDNANIVNVSLSALGPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALV---DCCSSGRVVSVLEGGYSLE 1886 TLVVY P CL H + HQEN RL +LCG +G L++ F+ L+W + + PA + D+LRVH + Y+ H++ C G P S +G + S TA D TT H + Y +G D D+ +SR SY AAR+AAGAV A+D+VV+ + NAFV VRPPGHHAGP+G V SE F + P M + GFCLLN+ AIGA YA S Y G E++R+AIVD DIHHGNGTEE++R L P + PLP SW P++ YKPW DE D DNVFF S+ L D+D FYP SG + NI+N+ LS LGP +E +K LT L ++A +F+ K L+ L+ F PDL+++SAGFDGH +D+Y+YL+ + Y W+T L D C GR+VSVLEGGY++E Sbjct: 210 TLVVYQPTCLDHHN----DTHQENRERLSVLCGPQGILQKPRFRSLKWANLRELKPARLNDVLRVHSFQYIRHLERLCDGLPEQNDRYS------------VGPL--YLESHRTASKKDKSKPKTTLSPLEWMKT--------EHAKRCYEVTNPPSSGLFDTDSPISRRSYDAARLAAGAVCHAIDKVVRRETKNAFVVVRPPGHHAGPNGCVESEGFHRRPEMCTCGFCLLNNVAIGAGYAMSTYSTPYYSKTSPSRSSSKDQGEHAEITRIAIVDFDIHHGNGTEEIIRNLVPHDQKYPLPSSWAPLSFPSYKPWRDENDIDNVFFSSIHLFDEDNFYPCSGKGPQGDSAELQQVENILNLPLSFLGPKYLEEREK--LTVKAKKALMDQASRQFREKVSKKLVPALRAFQPDLILLSAGFDGHADDFYYYLTEDDYAWVTTELTGVADECCEGRLVSVLEGGYNVE 651
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A4D9CVT0_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVT0_9STRA) HSP 1 Score: 337 bits (863), Expect = 2.810e-95 Identity = 225/556 (40.47%), Postives = 282/556 (50.72%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPS-----------GTPSSNPGDDNNVNGKKIGTMG---------------TTAPSTTTAPTNDTQLAATTTEK--------------------AXXXXXXXXXXXXXRH----------------EQE------EYGQRFVADAG--------------------------------------YVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRS--GEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWL-DEQDADNVFFGSVSLQDKDLFYPASGTEEERFDDNANIVNVSLSALGPP---PGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALVDCC--SSGRVVSVLEGGY 1877 TL++YPP CL H + NHQE+ RL +LCG +G LRR F LEW D + + PA +D+LRVHEYDY+ H++ C PP G + G+ V + ++ AP ++P + A++ EK A H E+E E G+ DAG ++D DTRV +S+ A +AAGAVI AVD+V G FVA RPPGHHAGP G+VPS FWK P M SSGFCLLN+ AIGAAYAR YGR+ G +RVAIVD DIHHGNGTE++VR L+P LPLP SW P ++KPWL +E+DA +VFFGS++L D FYP SG E + NIVNV L L PP PG K + L K+ E +A EF+ K S LL +LK F+PDLL ISAGFDGHVED+YHYL+ E Y WIT LV +SG+V+SVLEGGY Sbjct: 273 TLIIYPPACLEHETL----NHQESKDRLLVLCGPQGVLRRPRFASLEWADGASVLPATTSDILRVHEYDYIRHLRAICQALPPVPHHSKPGYGEVGGATIEEGEGEEVASSLLASLPPEFQPEHSPTPPVDLVPAPPVRSSPAFPSSGASSPAEKDEDETXXXXXXXXXXXXHRRANNATPSTCAPILKHHTSIRDFPAEKREVVGEEREKGEGSPEGGEGLGVDAGGHPSGRRLRRADRGGEAFEKKERAGSLSGHGGQETVSQFLDSDTRVCHDSFRVACVAAGAVIQAVDQVAAGRR-RVFVATRPPGHHAGPRGAVPSHCFWKAPSMTSSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVRALQPSRRLLPLPASWAPEHYQIFKPWLSEEEDAASVFFGSINLVDGSHFYPCSGREMDNDQAAPNIVNVELRPLRPPQAAPGT-GKAKMLGPRKVKEYCQRASGEFREKVSSMLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGY 822
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: T0R736_SAPDV (Hist_deacetyl domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R736_SAPDV) HSP 1 Score: 311 bits (796), Expect = 1.560e-89 Identity = 201/461 (43.60%), Postives = 254/461 (55.10%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGY-VDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRS---------GEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDL-FYPASGTEEERFDDNAN---IVNVSLSALGPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALV---DCCSSGRVVSVLEGGYSL 1883 TL+VY P CL H HQEN +R+ LCG G L FQ L W + PA + DL RVH YL H++ CA PP +N N G + ++ + + T K HE + +A +D D +S+ES+ AR A GAV+ AVD VV G + NAFV VRPPGHHAGP G V +++F K+PG S GFCLLN+ AIGAAYA + YG S V RVAI+D DIHHGNGTEE+VR LR R PLPPSW P T Y PW D+ DADNVFF S+ + D+ FYP SG ++ A+ IVN+ L+ LG + KR +T+L + +A +EF+ K LL L+ F+PDL++IS+GFDGHV+DYYH L+ YEWIT LV D C GR+VSVLEGGYSL Sbjct: 103 TLIVYQPSCLDH----HTGRHQENRQRVAALCGPHGVLNLPRFQHLRWAPLDQLVPARLVDLERVHSRAYLRHLEATCALLPPQ---DANLSIQNEFEGHR---------------SHKSWIQTTKAVKC--------------HEDT------ICNAAVDLDPDMPISKESFMTARYAVGAVLHAVDEVVCGRSRNAFVVVRPPGHHAGPYGCVENDAFHKSPGGCSCGFCLLNNVAIGAAYAMTTYGPSHYSKASISHATVRRVAIIDFDIHHGNGTEEIVRNLRLHDHRYPLPPSWAPKTFPSYMPWRDDDDADNVFFASMHVYDETTAFYPGSGRGPHGRNELASCNTIVNIPLTNLGA-----SGKRGTERTRLEHM-ERASSEFQSKATEVLLPALRAFAPDLILISSGFDGHVDDYYHGLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGYSL 515
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: K3WTA3_GLOUD (Hist_deacetyl domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTA3_GLOUD) HSP 1 Score: 313 bits (803), Expect = 1.080e-88 Identity = 188/465 (40.43%), Postives = 254/465 (54.62%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAAT---TTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRS-----------GEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGTEEE----RFDDNANIVNVSLSALGPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWIT---LALVDCCSSGRVVSVLEGGYSL 1883 TL+VY P CL H + HQEN RL +LCG +G L ++ F+ L+W + + + PA + D+LRVH ++Y+ H++ C P S +G + + L+ + +EKA Y +G D+D +S+ SY AAR+AAGAV A+D+V+ D NAFV VRPPGHHAGP+G V +++F + P M + GFCLLN+ AIGAAYA S Y S + RVAIVD DIHHGNGTEE +R L P PLPPSW P+ + YKPW DE+D +NV F S+ L D D FYP SG+ D+ NI+N+ L LGP +E K LT L +A F+ + LL L F PDL+++SAGFDGH +D+Y++LS + Y WIT A+ D C GR+VSVLEGGY++ Sbjct: 239 TLLVYQPTCLDHHN----DTHQENRERLGVLCGPEGVLHKDRFKDLQWANLNELKPARLNDMLRVHSFEYIQHLERVCGLLPEQDEAYS------------VGRLYD----------ENKDLSYSDWINSEKAKKC----------------YTVTNPPSSGTFDMDAPISKSSYLAARLAAGAVCHAIDKVLTHDAKNAFVVVRPPGHHAGPNGCVEADTFHRRPEMCTCGFCLLNNVAIGAAYALSTYSASYYTSHNGKNASKPIERVAIVDFDIHHGNGTEECIRNLTPHKQNYPLPPSWAPLQFSSYKPWRDEKDQENVLFASIHLYDDDNFYPCSGSGPHGCSPELRDHPNIINMPLDTLGPKYLEERLK--LTAKAKKSLMEQASKAFRHNVTTRLLPALTKFHPDLILLSAGFDGHADDFYYFLSEDDYGWITEQIAAVADECCDGRIVSVLEGGYNV 659
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A1W0ABG1_9STRA (Histone deacetylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABG1_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.650e-87 Identity = 197/469 (42.00%), Postives = 252/469 (53.73%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGY-----VDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYGRS---------GEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDL-FYPASGTEEERFDDNAN---IVNVSLSAL---GPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWITLALVDC---CSSGRVVSVLEGGYSLE 1886 TLVV P C+ H HQEN RR+ +CG G L + F L W + + A I DL RVH +YL+HI+ C G P + D N+ + A + K + + ++ A++ Y +D DT +S ES+ +A +A GAV+ AVD+VVQGDN NAFV +RPPGHHAGP G V +++F + P S+GFCLLN+ AI AAYA S Y S E+ RVAIVD DIHHGNGTEE++R L P R PLP SW P + Y PW D QDA NV+F S+ L D + FYP SG D AN IVN+ L L G P D + K + KT + + A EF+ K S L L F+PDL++ISAGFDGHV+DYYH+L+ YEWIT LVD C GR+VSVLEGGY+L+ Sbjct: 72 TLVVCQPICMDH----HTGGHQENRRRMAEICGPNGILLKPRFNHLRWAELDQLKSARICDLSRVHSLEYLMHIERVCMGLPQQNS-------DLNL---------------------ENHFVAGQSYKEWL--------------KTDATMKYFAESDYPALGKLDHDTALSSESFKSALLAVGAVLHAVDKVVQGDNRNAFVVIRPPGHHAGPYGCVENDAFHEAPDTCSNGFCLLNNVAIAAAYAMSNYSTSYYSAGVSPFAEIRRVAIVDFDIHHGNGTEEIIRNLYPHYHRYPLPASWAPKSFHSYMPWRDSQDAQNVYFASLHLHDDQVPFYPGSGKGPHGQHDLANAENIVNIPLKRLIPHGKSPSDCSTK--IRKTFIEQ----ASEEFRLKASSILFPSLLAFNPDLILISAGFDGHVDDYYHFLTEWDYEWITEKLVDIADECCCGRIVSVLEGGYNLQ 488
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A3F2RKP9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKP9_9STRA) HSP 1 Score: 308 bits (790), Expect = 3.060e-87 Identity = 191/473 (40.38%), Postives = 252/473 (53.28%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEKAXXXXXXXXXXXXXRHEQEEYGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRY------------GRSGE---------VSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGTEEE----RFDDNANIVNVSLSALGPPPGDE-AKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWIT---LALVDCCSSGRVVSVLEGGYSL 1883 TL+VY P CL H ++HQE+ +RL +L G +G L + F L W + + + PA + D+LRVH ++Y+ H++ C P + +GT+ D Q +++ E E+ G D+D+ +S+ SY AARMAAGAV AVD+V+ + NAFV VRPPGHHAGP+G V E F P M + GFCLLN+ IGA+YA S Y SG + RVAIVD DIHHGNGTEE++R L P PLPPSW P+ + YKPW DE D DNVFF S+ L D D FYP SG + + NIVN+ L ALGP DE K A K +L E +KA F+ L+ L F PDL++ISAGFDGH +D+Y++L+ + Y WIT A+ + C GRVVSVLEGGY++ Sbjct: 120 TLLVYQPTCLDHHN----DSHQESRQRLCVLGGPEGVLHKERFNDLTWANLNELRPAQLDDILRVHTFEYIQHLERACGNLPEQNSEYL------------VGTL------------YDKQTDEIKSKELTFTEWLKTENALKCFEVEDQ-----PSGGSFDMDSPISKSSYMAARMAAGAVCHAVDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPDMCTCGFCLLNNVCIGASYAMSNYCAPYYTPPTPGSSNSGSLLEPRKRVGIKRVAIVDFDIHHGNGTEEVIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDETDPDNVFFSSIHLYDDDNFYPCSGAGPHGCSPELEKSKNIVNLPLKALGPKYLDERVKLSAKAKRQLMEQASKA---FRDNVTKKLIPALTKFRPDLIMISAGFDGHADDFYYFLTEDDYSWITEQVTAVAEDCCDGRVVSVLEGGYNV 556
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Match: A0A0W8DNI8_PHYNI (ATP-binding Cassette (ABC) Superfamily n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DNI8_PHYNI) HSP 1 Score: 308 bits (788), Expect = 5.490e-87 Identity = 183/472 (38.77%), Postives = 245/472 (51.91%), Query Frame = 3 Query: 552 TLVVYPPECLLHMGVDDQENHQENPRRLELLCGEKGALRRNTFQGLEWVDPSLIAPALITDLLRVHEYDYLVHIQERCAGAPPSGTPSSNPGDDNNVNGKKIGTMGTTAPSTTTAPTNDTQLAATTTEK-AXXXXXXXXXXXXXRHEQEEYGQRFVADAGYVDVDTRVSRESYGAARMAAGAVILAVDRVVQGDNPNAFVAVRPPGHHAGPSGSVPSESFWKNPGMNSSGFCLLNSAAIGAAYARSRYG--------------------RSGEVSRVAIVDIDIHHGNGTEEMVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDEQDADNVFFGSVSLQDKDLFYPASGTEEE----RFDDNANIVNVSLSALGPPPGDEAKKRALTKTKLSELTNKAGNEFKRKCQSTLLARLKDFSPDLLIISAGFDGHVEDYYHYLSNEMYEWIT---LALVDCCSSGRVVSVLEGGYSL 1883 TL+VY P CL H ++HQE+ +RL +L G +G L ++ F+ L+W + + + PA + D+LRVH +Y+ H++ C P N L T +K H + + AG D+D+ +S+ SY AARMAAGAV A+D+V+ + NAFV VRPPGHHAGP+G V E F P M + GFCL+N+ IGA+YA S Y + + RVAIVD DIHHGNGTEE++R L P PLPPSW P+ + YKPW DE D DNVFF S+ L D D FYP SG + + NIVN+ L LGP DE K LT L ++ F+ L+ L F PDL+++SAGFDGH +D+Y++LS + Y WIT A+ D C GR+VSVLEGGY++ Sbjct: 128 TLLVYQPTCLDHHN----DSHQESRQRLCVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLERACGNLPEQ---------------------------------NKKYLVGTLYDKHKGDKELTYAEWLQTEHALKCFEVGDQPSAGSFDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEVIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDENDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSKNIVNLPLKVLGPKYLDERLK--LTSKAKRSLMEQSSKTFRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYNV 560 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.725.1 >prot_C-linearis_contig101.725.1 ID=prot_C-linearis_contig101.725.1|Name=mRNA_C-linearis_contig101.725.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=797bp MQFFHEGDAPAAPQPLQLLSLPPPPPPVGESLEIATTTAAVVAVESAIVTback to top mRNA from alignment at C-linearis_contig101:163348..172270- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig101.725.1 ID=mRNA_C-linearis_contig101.725.1|Name=mRNA_C-linearis_contig101.725.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8923bp|location=Sequence derived from alignment at C-linearis_contig101:163348..172270- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig101:163348..172270- >mRNA_C-linearis_contig101.725.1 ID=mRNA_C-linearis_contig101.725.1|Name=mRNA_C-linearis_contig101.725.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4782bp|location=Sequence derived from alignment at C-linearis_contig101:163348..172270- (Chordaria linearis ClinC8C monoicous)back to top |