mRNA_C-linearis_contig101.724.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A6H5JK20_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK20_9PHAE) HSP 1 Score: 713 bits (1840), Expect = 8.250e-217 Identity = 862/1687 (51.10%), Postives = 945/1687 (56.02%), Query Frame = 1 Query: 2584 QSLLGRYNCRAGPAECGFCRRGPGHLILLGEWARDVQAIRDGKPPPSSQAAL--LPDKASGALMGERASMSDRLAPARAARAANALLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGGTDGDLYARDYRFRGGGARKRGRRDLYDDTVAAPPQG---PARXXXXXXX----RLAERRGIPLGGGGAGSV--------------YGGEMRPSWSSTVEVRLGFTGKRFA--------------------------------------------------------------------------GSVKGQDQDAEMAMADVEASSTPPQTSVSAANGDXXXXXXXGXGKVAVHIKRQQASSPXXXXXXXXXXXXXXXXXXXXVTAVVPGAGVSSGIRSGSAKHFFTPKPMAGPRPAMARGGWASLTASTAAATFAPPSNGAGHVPEKNTDGSTXXXXXXXXXXXPKGNDGDVSRIATAAAVPAPKQAVTEGLGVLGSAAATAAAAGLESWWVHRPAAVLRCLRELLLDSEXXXXXXXXXXXXXXXVVGKGRGQPNGTASEGVAPPSSSLQISPSPXXXXXPAALVSLLLDA--GCGGAVGGVVPPSPSAQKQKQQKA-----------KVVAKEEEDFAAGLRKDPLQQLAGKIRLLLTAELSRGDGEEQGGGLKRGAAGGRAEPGLEEFISLVEDVHRSVERTTRQQHERLMQQRKAGREDGLGRLKERLRRLESKRGAIRADLDRLRRRVTSKTERIKTLRVLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFGARAKELEAQGNETEALSSGIKEDKVRRLADATRRERAAEESLL-EVEASE-----RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVSAMSAASRTXXXXXXXXXXXXXXXXXXXXKPSSAPVGGVESSGTDSAAGPSAASAEALV--------------------------------------APAAPGSGSGSGTSGGEQPAKPT-AMASSERVRQMSNP-----------EGSVGAGXXXXXXXGAVRFIQRDLDAARLMVRARKLDLAAREWVGVRCLLLKRATATAXXXXXXSGADRGGANGPGSCGGVTATPAARSTLVLKPTAIGAAPPSPSXXXXXXXXXKK--NGAGSAAVAELAA------EIDGALRQASPENAGLVVESPEEAKAANGA--SEVGVGWGGWDSGGGEKQYLAQAHTQEFLAAMSARGGWEAWGAASASAACVVRGVKAVLSGKCANALCLLFDDTAAPRGHAPSGGYSDSSGRSGVPKEEGGGGKGGRSVSINSVAVGALYAHMQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASIAVTDGAGAT-GVGAHEHALRLLDGNSRDLSSKSSRRLTRALLEGRPARDSGDASTGSXXXXXALAVLSAALAAFRPDLVIISTGLDGRKGHPCGRGDLVADDYEWLTVEVVKMAERLCAGRVVSVFEWHSVAARADT--DPAA--------------DTQEQASAPKGVGTSSAGTRPTDVARGGGSKSNGKTEISGKSGGEACLEEKXXXXXXENRGAEDGGQESSSSEVECLKGHIRGLRAGC 7065
+S G YNCRAG A C FCRRGPGHLILLGEWARDV+AI +G PPPS++A L P G L G+R ++ DRLAPARAARAANALLRXXXXXXXXXXXXXXXXXXXXXXXX +GD YARDYR R GG RKRGRRDLYDD AA G PA RLAERRG+ G GG+GSV YG E RP+WS TVEVRL FTG+R +V G D+ A AS P XXXXXXX X XXXXXXXXXXXXXXXXXXXX G A FFTP PMAGPRPA+A GGWASL ASTAA XXXXXXXXXXX +WWV+RP +VLRCLRELLL S G R NGTA A XXXXX SLLL+ GCGG PS SA K A +EDFAAGLR L++LAGK+RLLL A LS G E G RG R E GLEE+ISLVEDVHR+VERTTRQ+H+ LMQQRK +EDGLG+LKERLRRLESKRGAIRADLDRLRRR+ SKT+RIKTLR LADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRF ARAKELEA G +TEAL +G+KEDKVRRLADA RRERAAEE+LL +V+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXX GG S A+ PS APA P +G P +P+ A+ ++ ++ P +G+ G G VRFIQRDL+AA+LMVRARKLDLAAREWVG+RCLLL+ ATA XXXXXX XXXXXXXXX N A S A A E+D AL QASPE+AGLVVESP+EA G E +GWGGW SGG EK+YLAQAHTQE+LA MSA G E WGAASASAACVVRGV AVLSG+C NALCLL + P HAPSGGYS R GVPK K G S+NSVAVGALYAH QW+VGRVAVVD LATGTADILCRTLDPAFLYA++AV D A AT GVGAHEHALRLL + S XXXXXA+AVL AAL AFRPDLV+IS GLDGRKG PCGRGDLVA+D+EWLT+EVVKMAERLC GRVVSV E H VAA+ADT DP D++++ G+ + + GS +G E + GE EK E R D SSE+ECLKGHIRGLR+GC
Sbjct: 8 RSSEGMYNCRAGAAGCSFCRRGPGHLILLGEWARDVKAISEGIPPPSTRALLQTTPQDRMGVL-GDRTAIPDRLAPARAARAANALLRXXXXXXXXXXXXXXXXXXXXXXXX-----------AEGDQYARDYRLRVGGTRKRGRRDLYDDASAAAAGGTGAPAEAGLVKRGPGRPRLAERRGVSAGRGGSGSVGIVGXXXXXXXADPYGVERRPAWSGTVEVRLAFTGQRSVRLKLDNCPSSEARVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAVAAVAGIDRVAVSLRTPAVASLLPGTDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSRGGAGPFFTPTPMAGPRPALASGGWASLFASTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XAWWVNRPESVLRCLRELLLSSSSPSSSKDGKRH------GYDRRNGNGTADTADAXXXXXXXXXXXXXXXXX---XXSLLLETAGGCGGT------PSTSAGGAKASTVWQEXXXXXXXXXXXASAQEDFAAGLRGGLLEELAGKMRLLLRAGLSWGGDAE--GDCGRGVM--RLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQQRKNSKEDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFRARAKELEAHGVDTEALLAGMKEDKVRRLADAHRRERAAEEALLLQVQAPPVPTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKXXXXXXXXXXXXXXXXXXGGCGESNGSPASTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAPP-----LAATGACGPPRPSLAIVTTSTASALAAPALAVEFPSSGEDGAKGGRANSNPVGGGVRFIQRDLEAAQLMVRARKLDLAAREWVGLRCLLLRGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSASSFPKAATAVRRSWSKELDAAL-QASPEDAGLVVESPQEAVPPGGGCGEEARMGWGGWGSGGDEKRYLAQAHTQEYLAHMSAMGRQE-WGAASASAACVVRGVSAVLSGRCTNALCLLEN----PGRHAPSGGYSVGH-RCGVPKP-----KEGACCSVNSVAVGALYAHRQWSVGRVAVVDFGTQLATGTADILCRTLDPAFLYATVAVCDAATATTGVGAHEHALRLLGAGA------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVLYAALEAFRPDLVMISAGLDGRKGDPCGRGDLVAEDFEWLTLEVVKMAERLCGGRVVSVVERHCVAAQADTNADPGGAPXXXXXXXXXVGGDSEKEGGPRNAAAGRDDGSDAMETSGDSGSCEDGAGEGATPPSGEKKRHEKGARQMGE-RAPHDDDDGGPSSELECLKGHIRGLRSGC 1622
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI) HSP 1 Score: 689 bits (1777), Expect = 1.500e-209 Identity = 727/1492 (48.73%), Postives = 793/1492 (53.15%), Query Frame = 1 Query: 2413 ADPDFHKMHKLNYRALGFEGEVLESPWLCGGCLRRSTSCGCPEGFPTWLDSDVGQARQSLLGRYNCRAGPAECGFCRRGPGHLILLGEWARDVQAIRDGKPPPSSQAAL--LPDKASGALMGERASMSDRLAPARAARAANALLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGGTDGDLYARDYRFRGGGARKRGRRDLYDDTVAAPPQGPARXXXXXXXRLAERRGIPLGGGGAGSVYGGEMRPSWSSTVEVRLGFTGKRF----AGSVKGQDQDAEMAMADVEASSTPPQTSVSAANGDXXXXXXXGXGKVAVHIKRQQASSPXXXXXXXXXXXXXXXXXXXXVTAVVPGAGVSSG---------IRSGSAKHFFTPKPMAGPRPAMARGGWASLTASTAAATFAPPSNGA--------GHVPEKNTDGSTXXXXXXXXXXXPKGNDGDVSRIATAAAVPAPKQAVTEGLGVLGSAAATAAAAGLESWWVHRPAAVLRCLRELLLDSEXXXXXXXXXXXXXXXVVGKGRGQPNGTASEGVAPPSSSLQISPSPXXXXXPAALVSLLLDAGCGGAVGGVVPPSPSAQKQKQQKAKVVAKEEEDFAAGLRKDPLQQLAGKIRLLLTAELSRGDGEE--QGGGLKRGAAGGRAEPGLEEFISLVEDVHRSVERTTRQQHERLMQQRKAGREDGLGRLKERLRRLESKRGAIRADLDRLRRRVTSKTERIKTLRVLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFGARAKELEAQGNETEALSSGIKEDK-----------VRRLADATRRERAAEESLLEVEASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVSAM--------SAASRTXXXXXXXXXXXXXXXXXXXXKPSSAPVGGVESSGTDSAAGPSAASAEALVAPA----APGSGSGSGTSGGEQPAKPTAMASSERVRQMSNPEGSVGAGXXXXXXXGAVRFIQRDLDAARLMVRARKLDLAAREWVGVRCLLLKRATATAXXXXXXSGADRGGANGPGSCGGVTATPAARSTLVLKPTAIGAAPPSPSXXXXXXXXXKKNG----------AGSAAVAELAAEIDGALRQASPENAGLVVESPEEAKAANGA--SEVGVGWGGWDSGGGEKQYLAQAHTQEFLAAMSARGGWEAWGAASASAACVVRGVKAVLSGKCANALCLLFDDTAAPRGHAPSGGYSDSSGRSGVPKEEGGGGKGGRSVSINSVAVGALYAHMQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASIAVTDGAGATGVGAHEHALRLLDGNSRDLSSKSSRRLTRALLEGRPARDSGDASTGSXXXXXALAVLSAALAAFRPDLVIISTGLDGRKGHPCGRGDLVADDYEWLTVEV 6708
ADPDF KMHK NYRA+ EGE+LE PW+C GCLRRSTSCGCPEGFP WLDSDVGQARQSL RYNCRAG A C FCRRGPGHLILLGEWARDVQAI +G PPPSS+A L P G L G+R ++ DRLAPARAARAANALLRXXXXXXXXXXXX XXXX G +GD YARDYR R GG RKRGRRDLYDD XXXXXXX +V G D+ A AS P V G Q A+ P XXXXX G + G A FFTP PMAGPRPA+ARGGWASL ASTAAATF A XXXXXXXXXX P+ +A +A PAP G+ WWV+RP +VLRCLRELL XXXXXXXXXXXX G + NGTA XXXXX A +EDFAAGLR L+QLAGK+RLLL A LS G E +GGG+ R E GLEE+ISLVEDVHR+VERTTRQ+H+ LMQ+RK REDGLG+LKERLRRLESKRG+IRADLDRLRRR+ SKT+RIKTLR LADECWAEGEPSIGRDTLDNLEAMIRKEKTHLS+F ARAKELEA G +TEAL +G+KEDK A T S+ XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX X A + A+ XXXXXXXXXXXXXXXXXXX P A G S A + ++A AL APA P SG G GG R SNP G G VRFIQRDL+AA+LMV+ARKLDLAAREWVG+RCLLL+ XXXXXX XXXXXXXXX A +A + E+D AL QASPE+AGLVVESP EA G E VGWGGW SGG EK+YLAQAHTQEFLA MSA G E WGAASASAACVVRGV AVLSG+C NALCLL + P HAPSGGYS G GVPK K G ++NSVAVGALYAHMQW+VGRVAVVD HLATGTADILCRTLDPAFLYA++AV SAAL AFRPDLV+IS GLDGRKG PCGRGDLVA+D+EWLT+EV
Sbjct: 146 ADPDFQKMHKFNYRAVDLEGEILECPWVCRGCLRRSTSCGCPEGFPAWLDSDVGQARQSLFRRYNCRAGAAGCSFCRRGPGHLILLGEWARDVQAISEGIPPPSSRALLQTTPQDRMGVL-GDRTAIPDRLAPARAARAANALLRXXXXXXXXXXXXEGGGLEDXXXX-----------GAEGDQYARDYRLRVGGTRKRGRRDLYDDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVAAVAGMDRVAVSLRTPSAASLLPGTDDVG--------------GXXXXXXXXQLAAVPTPATATGVTAPGAEAXXXXXXXXXXXALGAKAAXXXXXXXXXFSRGGAGPFFTPTPMAGPRPALARGGWASLFASTAAATFXXXXXAAVVKEDXXXXXXXXXXXXXXXXXXXXXXXXXAPEATGPSDKAMAVSAGSPAPXXXXXXXXXXSGA------------WWVNRPESVLRCLRELLXXXXXXXXXXXXXXXXDGKRHGYDKRSGNGTADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANAQEDFAAGLRGGLLEQLAGKMRLLLRAGLSWGGNAEGDRGGGVMR------LEMGLEEYISLVEDVHRAVERTTRQKHDSLMQERKNSREDGLGKLKERLRRLESKRGSIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSKFRARAKELEAHGVDTEALLAGMKEDKGGGGEASSLPGTSAAASPTATXXXXXXXXXXXTGSDXXXXXXXXRGASSREDEKPVGVVRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPTKKAGASPATAAAKXXXXXTGGCGESNGFPASAPXXXXXATKXXXXXXGALATXXXXXXXXXXXXXXXXXXXXXPAPPLAATGACAPP-RPSLAIMTTSTASALAAPALAVEVPSSGE-DGARGG---------------RANSNPVG------------GGVRFIQRDLEAAQLMVQARKLDLAAREWVGLRCLLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSFPKAATAVRRSWSKELDAAL-QASPEDAGLVVESPREAVPPGGGCGEEARVGWGGWGSGGDEKRYLAQAHTQEFLAHMSAMGRQE-WGAASASAACVVRGVSAVLSGRCTNALCLLEN----PGRHAPSGGYSVGHG-CGVPKL-----KEGACCAVNSVAVGALYAHMQWSVGRVAVVDFGTHLATGTADILCRTLDPAFLYATVAV----------------------------------------------------------------SAALEAFRPDLVMISAGLDGRKGDPCGRGDLVAEDFEWLTLEV 1488
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: D8LN86_ECTSI (Similar to DNA (Cytosine-5-)-methyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN86_ECTSI) HSP 1 Score: 213 bits (543), Expect = 1.760e-54 Identity = 178/267 (66.67%), Postives = 186/267 (69.66%), Query Frame = 1 Query: 1150 ARCSMRTRRSGGASATVTGASKWPRTASSSPGCAGSIPKQGGSTGXXXXXXXXXXXXXXSRSAGDXXXSRXXRAREXXXXXXXXXXXXXXXXAEVVDGLSPNLVSAGSITA---------------LPTYNTTGTRPPRFGKHDKALLATHGAKQPKGKHPGYTITLHGKKVRRCGSCPRCVSPDCGQCRYCEDMPKHGGRGSYKQPCDARKCDWVEFDRKAKTVITQLSSEQXXXXXXXXXXXXXXXXXXXGVRGAGSPRGRGRGG 1905
ARC +T R+ G SAT T AS+W TASSSP GS K GGS G XXXXXXXXXXXX XXX XX XXXXXXXXXXXXXXXX LPTY+TTGT+PPRFGK DKALLATHGAKQPKGKHPGY ITL+GKKVRRCG C C S DCGQCRYC DMPKHGGRGSYKQPC+ARKC WVEFDRKAKTVITQLSSEQXXXXXXXXXXXXXXXX R + SPRGRGR G
Sbjct: 314 ARCLTKTLRNAGESATGTSASRWRHTASSSPVFVGSTRKHGGSIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLSSEQXXXXXXXXXXXXXXXXPG---RSSASPRGRGRRG 577
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: D7G062_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G062_ECTSI) HSP 1 Score: 138 bits (348), Expect = 6.170e-35 Identity = 62/67 (92.54%), Postives = 66/67 (98.51%), Query Frame = 1 Query: 13 MLERMKNPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLKHAAAYPYKKKAYAGTARLQV 213
MLERM+NP PADEGVDPR+MCLVVFLCEGGHHVTDWV+PGSMRPYL+HAAAYPYKKKAYAGTARLQV
Sbjct: 1 MLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQV 67
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE) HSP 1 Score: 139 bits (349), Expect = 8.550e-29 Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 Query: 1 SRAQMLERMKNPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLKHAAAYPYKKKAYAGTARLQ 210
S+ +MLERM+NP PADEGVDPR+MCLVVFLCEGGHHVTDWV+PGSMRPYL+HAAAYPYKKKAYAGTARLQ
Sbjct: 617 SKREMLERMENPDPADEGVDPRHMCLVVFLCEGGHHVTDWVAPGSMRPYLRHAAAYPYKKKAYAGTARLQ 686
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A6H5L3L8_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L8_9PHAE) HSP 1 Score: 104 bits (259), Expect = 4.740e-19 Identity = 98/291 (33.68%), Postives = 138/291 (47.42%), Query Frame = 1 Query: 5887 AANGASEVGVGWGGWDSGGGEKQYLAQAHTQEFLAAMSARGGWEAWGAASASAACVVRGVKAVLSGKCANALCLLFDDTAAPRGHAPSGGYSDSSGRSGVPKEEGGGGKGGRSVSINSVAVGALYAHMQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASIAVTDGAGATGVGAHEHALRLLDGNSRDLSSKSSRRLTRALLEGRPARDSGDASTGSXXXXXALAVLSAALAAFRPDLVIISTGLDGRKGHPCGRGDLVADDYEWLTVEVVKMAERLCAGRVVSVFE 6759
A +G+ + G GG D GG +++ +A + ++ + G +W AA +A V+ V VL G+ NA C + P GH +GV G G + +N+VA+ ALYAH V RVAVVD D H GT D+LCRT P FLYASI A G G + ++ G + + + + G +G S A A + AAL F+P+L+++S G D + P G L A D+E T +V AERLCAGR+VSV E
Sbjct: 174 AVDGSEDDLGGLGGGDRGGPQERAMA-VYGRDTV------GNKRSWEAAMTAAGAVLEAVDRVLHGEAHNAFCAVR-----PPGH-----------HAGVELHCMGAVSNGFCI-LNNVALAALYAHHYGNVARVAVVDFDVHHGNGTQDVLCRTEHPGFLYASI----HAFNRGEGENTSQAKIFPGTGAEGEAHGN---VLNIPLGDQVHPAGFHS--------ATARVVAALDKFKPNLILVSAGFDAHQADPSHLGTLCARDFEVFTRRMVTAAERLCAGRMVSVLE 425
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A8J2SBW9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBW9_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.610e-17 Identity = 97/292 (33.22%), Postives = 127/292 (43.49%), Query Frame = 1 Query: 5959 LAQAHTQEFLAAMSAR--------------------GGWEAWGAASASAACVVRGVKAVLSGKCANALCLLFDDTAAPRGHAPSGGYSDSSGRSGVPKEEGGGGKGGRSVSINSVAVGALYAHMQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASIAVTD-----GAGATGVGAHEHALRLLDGNSRDLSSKSSRRLTRALLEGRPARDSGDASTGSXXXXXALAVLSAALAAFRPDLVIISTGLDGRKGHPCGRGDLVADDYEWLTVEVVKMAERLCAGRVVSVFE 6759
LA AHT+ ++ A+ R G + WGAA A++A V++ V AVLSG+ NALC + P GH + G P G +N A+GA +A + + RVAV D D H GT DIL RT DP F+Y S+ T G+G H L + ++ T +LE AL + AL AFRPDL+I+S+G D K P G L A DY LT +V AER C GR+VSV E
Sbjct: 1325 LAYAHTRSYVGAVRQRCLDLATEATMIFGGEDEDTCGNRDTWGAAIAASAAVIQAVDAVLSGEARNALCAVR-----PPGHHAGASINSL----GAP--------GNGYCLLNHAALGAKHAAHERGLKRVAVFDFDVHHGNGTEDILARTFDPRFMYLSLHATGEDVFPGSGRRARPDHPGVLNAPHRAEKVVT-------TEWVLE------------------EALPRILNALDAFRPDLLILSSGFDAHKRDPVDLGRLDAADYGVLTRRLVDWAERKCCGRLVSVLE 1574
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A6H5JMT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT6_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.870e-17 Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1483 LPTYNTTGTRPPRFGKHDKALLATHGAKQPKGKHPGYTITLHGKKVR 1623
LPTY+TTGT+PPRFGK DKALLATHGAKQPKGKHPGY ITL+GKKVR
Sbjct: 207 LPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR 253
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A7V7CW34_9PROT (Histone deacetylase family protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7CW34_9PROT) HSP 1 Score: 82.4 bits (202), Expect = 9.950e-13 Identity = 73/247 (29.55%), Postives = 107/247 (43.32%), Query Frame = 1 Query: 6022 WGAASASAACVVRGVKAVLSGKCANALCLLFDDTAAPRGHAPSGGYSDSSGRSGVPKEEGGGGKGGRSVSINSVAVGALYAHMQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASIAVTDGAGATGVGAHEHALRLLDGNSRDLSSKSSRRLTRALLEGRPARDSGDASTGSXXXXXALAV-LSAALAAFRPDLVIISTGLDGRKGHPCGRGDLVADDYEWLTVEVVKMAERLCAGRVVSVFE 6759
W AA SA V V AV+ G C NA C + P GH +++ + G N+VA+GAL+A + + ++AV+D+D H GT DI +P YAS D TG AHE + S+ + + A GS A+++ + +A F PDL+++S G D P L D+ W+TVE+ K+A+ C GR+VSV E
Sbjct: 91 WEAALRSAGATVAAVDAVIRGDCRNAFCAVR-----PPGH-----HAEHNAVMGF-------------CLFNNVAIGALHAQVSHGLKKIAVLDIDVHHGNGTQDIFFD--NPGLFYASTHQQDSFPGTGF-AHE--------------TGSAGNIVNIPMH---------AGAGSDAWREAVSIGILPRIADFSPDLIMLSAGFDAHASDPLAHMRLTTQDFHWITVELCKLADSFCQGRLVSVLE 288
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Match: A0A4R3J512_9PROT (Acetoin utilization deacetylase AcuC-like enzyme n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J512_9PROT) HSP 1 Score: 79.0 bits (193), Expect = 1.450e-11 Identity = 77/239 (32.22%), Postives = 106/239 (44.35%), Query Frame = 1 Query: 6052 VVRGVKAVLSGKCANALCLLFDDTAAPRGHAPSGGYSDSSGRSGVPKEEGGGGKGGRSVSI---NSVAVGALYAHMQWAVGRVAVVDLDAHLATGTADILCRTLDPAFLYASIAVTDGAGATGVGAHEHALRLLDGNSRDLSSKSSRRLTRALLEGRPARDSGDASTGSXXXXXALAVLSAALAAFRPDLVIISTGLDGRKGHPCGRGDLVADDYEWLTVEVVKMAERLCAGRVVSVFE 6759
V++GV AVL+G+ NA C + P GH +S+ GR++ N++AVGALYA V RVA+VD D H G+ + D YAS + TG A +H GN +L +G A+ + L A+AAF PD++++S G DG P DL ADDY WLT E+ +A R C+GR+VSV E
Sbjct: 100 VMQGVDAVLAGRADNAFCAVR-----PPGH-----HSEP----------------GRAMGFCLFNNIAVGALYALEHEGVARVAIVDFDVHHGNGSETVARGRAD--LFYASSHQSPAYPGTGR-ADDHGPL---GN---------------ILNVELPPGTGSAAFRAAYVDKILP----AVAAFAPDMILLSAGFDGHGRDPLAAHDLSADDYAWLTGELCALAGRCCSGRIVSVLE 287 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.724.1 >prot_C-linearis_contig101.724.1 ID=prot_C-linearis_contig101.724.1|Name=mRNA_C-linearis_contig101.724.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2364bp MLERMKNPHPADEGVDPRYMCLVVFLCEGGHHVTDWVSPGSMRPYLKHAAback to top mRNA from alignment at C-linearis_contig101:142094..159590+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig101.724.1 ID=mRNA_C-linearis_contig101.724.1|Name=mRNA_C-linearis_contig101.724.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=17497bp|location=Sequence derived from alignment at C-linearis_contig101:142094..159590+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig101:142094..159590+ >mRNA_C-linearis_contig101.724.1 ID=mRNA_C-linearis_contig101.724.1|Name=mRNA_C-linearis_contig101.724.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=14184bp|location=Sequence derived from alignment at C-linearis_contig101:142094..159590+ (Chordaria linearis ClinC8C monoicous)back to top |