mRNA_C-linearis_contig101.722.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: D7G072_ECTSI (HpcH_HpaI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G072_ECTSI) HSP 1 Score: 546 bits (1406), Expect = 1.430e-188 Identity = 274/287 (95.47%), Postives = 277/287 (96.52%), Query Frame = 1 Query: 349 MRSVLYTPGSSRHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDTDLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEAGQESG 1209
MRSVLYTPGSSRHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEV KGGYGRKAVVVRINSLDSPWGEDDIREVAKLT+DAVVIPKVESAADVKRVADLLR HGAKDTDLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAA+GEGCAVLDGSLVERLHAENAR SIAALEAG E+G
Sbjct: 1 MRSVLYTPGSSRHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVAKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTVDAVVIPKVESAADVKRVADLLRHHGAKDTDLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAARGEGCAVLDGSLVERLHAENARRIIELHESIAALEAGHEAG 287
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: A0A835ZHS4_9STRA (Pyruvate/Phosphoenolpyruvate kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHS4_9STRA) HSP 1 Score: 317 bits (813), Expect = 3.790e-99 Identity = 163/298 (54.70%), Postives = 213/298 (71.48%), Query Frame = 1 Query: 307 STSSGGSAKPLL-KPMRSVLYTPGSSRHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLT-LDAVVIPKVESAADVKRVADLLRQHGAKD-TDLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALE 1191
ST +G +A+ L +P+RSVLYTPG +HL K++ D +LIDLEDGVAP +K AR+ V GG + + VR+N LD+ WG DD++ VAKL +DA+ +PKVES A+V+ VA L + GA T +W +IETP GV + IA+AH S LV+GTSDL R+L HT DR PLLYSLS+C++AAR L LDGVHLD+ D+ GFE+AC+QG+++GMDGKTLIHPSTVAVANWFFGP+A +VEQ+YR+VEA +EA A+G+G +LDG L+E LHA+NA +I A E
Sbjct: 6 STVAGSAAQKLQGRPLRSVLYTPGFGKHLAKVKTSVADCALIDLEDGVAPSSKVAARKAVAELFQAGGLSNRMLTVRVNGLDTEWGWDDLKAVAKLERVDAIALPKVESPAEVQEVAAYLEKEGASQHTTIWSLIETPKGVQNVDAIAAAHPRQSALVMGTSDLCRELHCLHTKDREPLLYSLSKCVVAARANDLLILDGVHLDLEDSTGFEQACKQGKELGMDGKTLIHPSTVAVANWFFGPSAEDVEQSYRIVEAMQEAMARGQGACLLDGKLIENLHADNALRIIALHEAIQAFE 303
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: A0A3S0HXF6_9PROT (CoA ester lyase n=2 Tax=Azospirillum TaxID=191 RepID=A0A3S0HXF6_9PROT) HSP 1 Score: 311 bits (798), Expect = 3.720e-97 Identity = 158/290 (54.48%), Postives = 202/290 (69.66%), Query Frame = 1 Query: 340 LKPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDT-DLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEAGQE 1203
++P RSVLY PGS+ R L K R + D ++DLED VAP+AK AR+ + + GGYG + +V+R N L++PWG DD+R A DAV++PKVESA V++ LLR GA D+ LWCM+ETPLG+ A EIA A T+ LVLGTSDL +DL A HT DR P+L SL C+LAAR YGL LDGVHLD+ D EGF ++CRQGR++G DGKTLIHP T+A N FGP+A E+ QA+R++ AH EAAA+G+G ++DG LVE LH ENAR +IAALE +
Sbjct: 5 VRPRRSVLYMPGSNARALDKGRSLPADGLILDLEDAVAPDAKAQARDTIAQAIAAGGYGGRELVIRTNGLNTPWGYDDLRMAATSGADAVLLPKVESADAVRQAESLLRAAGAPDSLRLWCMMETPLGMLNAKEIAGASPTLGALVLGTSDLAKDLHAAHTRDRLPMLTSLGLCLLAARAYGLAVLDGVHLDLNDEEGFAQSCRQGRELGFDGKTLIHPKTIAACNAVFGPDAEEIAQAHRLIAAHAEAAAQGKGVVLVDGKLVENLHVENARRLVALSDAIAALEGNAQ 294
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: UPI000E5D605A (CoA ester lyase n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5D605A) HSP 1 Score: 306 bits (784), Expect = 4.410e-95 Identity = 157/286 (54.90%), Postives = 197/286 (68.88%), Query Frame = 1 Query: 343 KPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDT-DLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEA 1194
+P RSVLY PGS+ R L K R I DA ++DLED VAP+AK AR V + + +GGYGR+ ++VR+N LDSPWG DDI +A DA++IPKVESA V+ V L+ GA + CM+ETP G+ A EIA A ++CLV+GTSDL +DL A HTP+R P+L SLS C+LAAR YGL +DGVHLD+ DAEGF+ C QGR++GMDGKTLIHP TVA AN F P+ +V QA R++EAH EA G+G VLDG L+E LH E+A+ SI LEA
Sbjct: 7 RPRRSVLYMPGSNTRALEKGRGIPADALILDLEDAVAPDAKAEARANVVAALAEGGYGRREIIVRVNGLDSPWGRDDIAAIAPTGADAILIPKVESAEMVQEVERLMVSAGAAGAMGIMCMMETPRGILHAGEIAGASARLTCLVMGTSDLVKDLNAKHTPERLPVLTSLSLCVLAARAYGLAVVDGVHLDLNDAEGFDAQCNQGRELGMDGKTLIHPKTVAAANTAFAPSEDDVAQAKRIIEAHSEATRAGKGVVVLDGKLIENLHVEDAQRTVALAESITDLEA 292
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: A0A3B8ZVP8_9DELT (CoA ester lyase n=3 Tax=Desulfuromonadales TaxID=69541 RepID=A0A3B8ZVP8_9DELT) HSP 1 Score: 305 bits (780), Expect = 2.110e-94 Identity = 152/287 (52.96%), Postives = 198/287 (68.99%), Query Frame = 1 Query: 340 LKPMRSVLYTPG-SSRHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDT-DLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEA 1194
++P RS+L+ PG ++R L K RE+ D + DLED VAP AK AR V + + GGYGR+ +VVR+N LD+PWG DD+ A+ DAV++PKVES A V+R DLL + A D ++WCM+ETP G+ RA EIA+A V+ LV+GTSDLT++L+A HTPDR PLL SL C+L AR YGL LDGVHLD+ D GF ACRQG D+G DGKTLIHP T+AVAN F P+A+ + A +V+ H A +GEG V+DG L+E LH ++AR +I+ALEA
Sbjct: 5 MRPRRSLLFMPGVNARALAKARELPADGLIFDLEDAVAPAAKGEARAAVGTALAAGGYGRRELVVRVNGLDTPWGRDDLAAAARCGCDAVLLPKVESGASVRRTLDLLEEFAAPDNLEIWCMLETPRGILRAEEIATASTRVAALVMGTSDLTKELRARHTPDRRPLLASLGHCLLVARAYGLTALDGVHLDLHDDTGFAAACRQGVDLGFDGKTLIHPKTIAVANSLFAPDAAALAWARKVITVHSAAMERGEGIVVVDGQLIENLHVDDARRLVALAAAISALEA 291
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: A0A2E6QIK9_9PROT (CoA ester lyase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QIK9_9PROT) HSP 1 Score: 304 bits (778), Expect = 3.300e-94 Identity = 150/285 (52.63%), Postives = 200/285 (70.18%), Query Frame = 1 Query: 343 KPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGA-KDTDLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALE 1191
+P RSVLY PGS+ R L K R + DA ++DLED V P+AK AR+R+ V GGYG++ +VVR+N+L +PWG DD+ +A DAV++PKVESA +V++ +L ++GA +D +WCM+ETP G+ EIA+AH V+CLV+GTSDLT+DL ANHTP R PL+ S+ C+LAAR +GL LDGVHLD+ D GF ACRQGRD G DGKTLIHP T+A AN FGP+ E+ + R++ AHEEAA +G+G ++DG L+E LH A+ IAA+E
Sbjct: 5 RPRRSVLYMPGSNQRALEKGRTLPADALILDLEDAVTPDAKAEARDRIAEAVGTGGYGKREIVVRVNALSTPWGYDDLAGLAGCGADAVLLPKVESAGEVRQAVAVLEENGAPEDLAVWCMMETPRGILAVAEIAAAHPRVACLVMGTSDLTKDLHANHTPGREPLMTSIGLCLLAARAHGLAILDGVHLDLDDEAGFAAACRQGRDWGFDGKTLIHPKTIAAANAAFGPSDDEIAWSRRIIAAHEEAAREGKGVVLVDGKLIENLHVAEAQRLVVMAEMIAAME 289
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: A0A1Y6BHD5_9HYPH (Citrate lyase subunit beta / citryl-CoA lyase n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6BHD5_9HYPH) HSP 1 Score: 300 bits (768), Expect = 1.030e-92 Identity = 154/287 (53.66%), Postives = 201/287 (70.03%), Query Frame = 1 Query: 343 KPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAK-DTDLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEAG 1197
+P RS+LY PGS+ R L K R + D ++DLED VAP+AK ARE + + V GGYGR+ +VVR+N L++ WG DD+ +A DA+++PKVESAA V+ + LL GA D + CM+ETP G+ +A EIA+A +SCLV+GTSDL +DL A HTPDR P+L +LS C+LAAR +GL +DGVHLD++D EGF CRQGR +G DGKTLIHP T+A AN FGP+ +++ +A R++EAH A A G+G VLDG LVE LH E AR +IAALEAG
Sbjct: 6 RPRRSMLYMPGSNTRALDKGRSLPADGLILDLEDAVAPDAKAAARENIVAAVAAGGYGRRELVVRVNGLETAWGRDDVAALATSGADAILLPKVESAAMVQELERLLAAAGAPADLSIMCMMETPRGILKAEEIAAASTRLSCLVMGTSDLVKDLDAVHTPDRLPVLTALSLCVLAARAHGLAIVDGVHLDLSDDEGFAAHCRQGRALGFDGKTLIHPKTIAKANEVFGPSEAQIAEARRIIEAHGAAVAAGKGVVVLDGKLVENLHVEAARRTVAQAEAIAALEAG 292
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: W4M873_9BACT ((3S)-malyl-CoA thiolesterase n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4M873_9BACT) HSP 1 Score: 298 bits (763), Expect = 5.110e-92 Identity = 151/286 (52.80%), Postives = 199/286 (69.58%), Query Frame = 1 Query: 343 KPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDT-DLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEA 1194
+P RS+L+ PGS+ R + K + + D + DLED VAP+AK ARE+VC+ V GGYG + +VVR N+L + WG DD+ VA AV++PKVESA V++V +L +HG D+ +WCM+ETPLG+ RA IA+A V+ LV+GTSDLT+DLQA HT +RTPLL+SL C+L R YGL LDGVHL+++D EGF CRQG +MG DGKTLIHP T+ AN + P+ +V A RV+EAH EA AKG+G ++DG L+E LH E+A+ SIAALEA
Sbjct: 6 RPRRSMLFMPGSNARAIEKAKTLPADGLIFDLEDAVAPDAKVMAREQVCAAVRAGGYGGRELVVRANALTTLWGRDDLAAVATCGAHAVLVPKVESADGVRQVISILTEHGGPDSLAIWCMLETPLGILRAESIATASPRVAALVMGTSDLTKDLQAKHTRERTPLLHSLGHCLLVGRAYGLVVLDGVHLELSDDEGFAEVCRQGAEMGFDGKTLIHPKTIDAANAAYAPSPEDVAWARRVMEAHAEAEAKGQGVVLVDGQLIENLHVESAQRVVRIAESIAALEA 291
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: UPI0018723A97 (CoA ester lyase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018723A97) HSP 1 Score: 298 bits (762), Expect = 7.180e-92 Identity = 142/286 (49.65%), Postives = 205/286 (71.68%), Query Frame = 1 Query: 343 KPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDT-DLWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAALEA 1194
+P RSVLY PGS+ R L K R + D ++DLED VAP+AK+ ARE++ + + +GGYG++ + VR+N LDSPWG+DD++ +A DA+++PKVE+AA + + L+ GA + + CM+ETPLG+ A E+A A + ++CLV+GTSDL +DLQA HTP+R P+L SL CILAAR YG+ DGVHLD++D EGF +CRQG+++G DGKTLIHP T+A AN F P+ +E++ +++++ AH EA A+G+G V+DG L+E LH E+A+ +I LEA
Sbjct: 5 RPRRSVLYMPGSNARALEKGRSLPADGLILDLEDAVAPDAKETAREQIVAALKEGGYGKREIAVRVNPLDSPWGKDDVKAMATSGADAILLPKVETAAMIHELEKLMDAAGAPQSMGIQCMMETPLGMLNAQEVAGASKRITCLVMGTSDLVKDLQAAHTPERLPVLTSLGLCILAARAYGIAITDGVHLDLSDEEGFAASCRQGKELGFDGKTLIHPKTIAAANEVFAPSQAEIDWSHKIIAAHAEATAEGKGVVVVDGKLIENLHVESAQRLVALSEAIKELEA 290
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Match: G7Z9B5_AZOL4 (Citryl-CoA lyase n=7 Tax=Azospirillum TaxID=191 RepID=G7Z9B5_AZOL4) HSP 1 Score: 297 bits (761), Expect = 9.130e-92 Identity = 150/285 (52.63%), Postives = 194/285 (68.07%), Query Frame = 1 Query: 340 LKPMRSVLYTPGSS-RHLYKIREIACDASLIDLEDGVAPEAKDNARERVCSEVVKGGYGRKAVVVRINSLDSPWGEDDIREVAKLTLDAVVIPKVESAADVKRVADLLRQHGAKDTD-LWCMIETPLGVTRANEIASAHETVSCLVLGTSDLTRDLQANHTPDRTPLLYSLSRCILAARTYGLRCLDGVHLDMTDAEGFERACRQGRDMGMDGKTLIHPSTVAVANWFFGPNASEVEQAYRVVEAHEEAAAKGEGCAVLDGSLVERLHAENARXXXXXXXSIAAL 1188
++P RSVLY PGS+ R L K R + D ++DLED VAP+AK AR+ + + GGYG + +++R+N L++PWG DD+R A DAV++PKVESA V++ +LR GA + +WCM+ETPLGV A EIA A V LVLGTSDL +DL A HT R P++ SL C+LAAR YGL LDGVHLD+ D EGF +CRQGR++G DGKTLIHP T+A N F P+A E+ A+R++ AH EAAA G+G ++DG LVE LH ENAR +IAAL
Sbjct: 5 VRPRRSVLYMPGSNARALEKGRSLPADGLILDLEDAVAPDAKAAARDTIAQALAAGGYGGRELIIRVNGLNTPWGYDDLRMAAASGADAVLLPKVESADSVRQAEAVLRTAGAPASQTIWCMMETPLGVLNAKEIAGASPAVGALVLGTSDLAKDLHAAHTAQRLPMITSLGLCLLAARAYGLAVLDGVHLDLNDDEGFAASCRQGRELGFDGKTLIHPKTIAACNAAFAPDADEIAHAHRIIAAHAEAAASGKGVVLVDGKLVENLHVENARRLVALAEAIAAL 289 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.722.1 >prot_C-linearis_contig101.722.1 ID=prot_C-linearis_contig101.722.1|Name=mRNA_C-linearis_contig101.722.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=397bp MKVLTAVARRAGVVRTAISSGRSFACGGLSGEPPASTAAVLCACPGRPYSback to top mRNA from alignment at C-linearis_contig101:124307..130162- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig101.722.1 ID=mRNA_C-linearis_contig101.722.1|Name=mRNA_C-linearis_contig101.722.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5856bp|location=Sequence derived from alignment at C-linearis_contig101:124307..130162- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig101:124307..130162- >mRNA_C-linearis_contig101.722.1 ID=mRNA_C-linearis_contig101.722.1|Name=mRNA_C-linearis_contig101.722.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at C-linearis_contig101:124307..130162- (Chordaria linearis ClinC8C monoicous)back to top |