mRNA_C-linearis_contig100.689.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: D7FTB9_ECTSI (Glucose-6-phosphate 1-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTB9_ECTSI) HSP 1 Score: 491 bits (1264), Expect = 3.030e-169 Identity = 243/301 (80.73%), Postives = 261/301 (86.71%), Query Frame = 2 Query: 74 MVLGVIKGETTGQPCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEP-TPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
M LGV TTGQPCVAL HPNGG VEVQLHG+TVTSFKTS G +VLF+SEKA+FNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATW LSEE P V+GHVKANFVLGHSE+TLAKWPH FSLRYEVDL DVL+VTLHVTNPGE+AFDFQ LLHTYL++ EIE AK+ GF NV Y+DQ L+N+ F DERPQADFT EVDR IY+GEIGDVGVVGGT VTNSC KTAPGAAEVCVPVDVVLWNPW+AKAKSL DFGDEE+HKMVCIEPGIV K HSIAPGETFSLKQ+IT
Sbjct: 1 MALGVTTSATTGQPCVALAHPNGGSVEVQLHGATVTSFKTSSGNDVLFLSEKAVFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWSLSEEEGEPAVEGHVKANFVLGHSEETLAKWPHSFSLRYEVDLGADVLSVTLHVTNPGEEAFDFQALLHTYLTVPEIEGAKVNGFQNVQYIDQ-LENNESFKDERPQADFTREVDR-------IYAGEIGDVGVVGGTTVTNSCEKTAPGAAEVCVPVDVVLWNPWIAKAKSLGDFGDEEYHKMVCIEPGIVSKSHSIAPGETFSLKQVIT 293
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: W7TQG6_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQG6_9STRA) HSP 1 Score: 227 bits (579), Expect = 3.100e-66 Identity = 128/298 (42.95%), Postives = 172/298 (57.72%), Query Frame = 2 Query: 107 GQPCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQ---QLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGG----TKVT-NSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIITP 976
G P V L H G EV G+T+TS+K + REVLFVS KA+F+G KAIRGG+PLVFPQFGQP K M HG ART+ W+LS+ T + V+A F L +E T WP F L Y + L L +L + N GE F+ Q LLHTYL + +I + + GF + +VD+ Q P T+ R + E DR +Y ++ ++ G KV +C G+ E D VLWNPW+ K++++ADFGD EF +MVC+EPGIV F+S+APG+ F L+Q I P
Sbjct: 16 GMPRVLLKHKAGATAEVYNFGATLTSYKPTPEREVLFVSHKALFDGQKAIRGGVPLVFPQFGQPKKEMAQHGFARTSHWELSD--TAVTEDVVRAVFHLTDTEITRMLWPFSFLLSYTLSLTAQTLTTSLRIENKGEAPFEAQALLHTYLRVRDIGQVALRGFQHHPFVDKVAAQAVERLP-TETRNSVNIAQETDR-------VYQTGANEITLLEGGAERVKVEYTACTVNRDGSDEALPHPDCVLWNPWVQKSQAMADFGDREFQEMVCLEPGIVSAFYSLAPGQAFLLEQTIRP 303
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A2R5G5X7_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5X7_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.060e-59 Identity = 114/281 (40.57%), Postives = 158/281 (56.23%), Query Frame = 2 Query: 140 GGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSC---VKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
G + V G T+ S+K ++G E LF SE+ + +K +RGG+PLVFPQFG + +P HG ART+ W L + PT E DG V FVL +E+TL WP F L + + L ++HV N GE+AF FQ LLHTY I +I + ++ G + YVDQ L+ S FT+E F E DR IY+ G + ++ G S + T ++ P D VLWNPW K+K + DFGDEEFH M+C+EPG V ++ + P T+ L Q +T
Sbjct: 28 GASIRVTKFGGTLYSYKDADGEEKLFASEEGHTDRSKPVRGGVPLVFPQFGGGE--LPKHGFARTSEWLLEDTPT-EQDGIVTVAFVLESNEETLKIWPFKFKLVHNIVFGASKLQTSMHVVNVGEEAFKFQALLHTYYLIEDISQVQVVGLKGLSYVDQ-LRESNTFTEENDPITFEAETDR-------IYTDAKGPIEILDGKSKKISIELSLSTGEDGTDI-KPCDAVLWNPWTEKSKGMGDFGDEEFHTMMCLEPGCVSRYETCEPNATWVLTQRVT 296
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A7S3PID4_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PID4_9STRA) HSP 1 Score: 206 bits (523), Expect = 4.940e-58 Identity = 115/311 (36.98%), Postives = 167/311 (53.70%), Query Frame = 2 Query: 80 LGVIKGETTGQ-PCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKA---MPSHGVARTATWKLS---------EEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
+ +K T G + + + +G V+V L+G T+ ++ S GRE LFVS+KA+ +G+K IRGGIPLVFPQFG +PSHG AR + W E+ DG V +L SE+ LA W HPF L +V + LA L V NPG + F+FQ LLHTY +S +E ++G + Y+DQ L+ +E + E D IY+ + + G TN + + PVD V+WNPW+ KAK + DFG EE+ +M+C+EPG V +F + PG+T++L+Q I+
Sbjct: 1 MATVKSTTFGSLEALEVKNSSGACVKVALYGGTIVAYADSNGRERLFVSDKALTDGSKPIRGGIPLVFPQFGDGQGKYPNLPSHGFARRSKWTFQGSSPTGSSFEDALTNADGSVTFYLILTDSEEILASWNHPFKLTLKVTFDNSNLATELSVENPGTEGFEFQALLHTYYLLSAVENIAVQGLKGLTYIDQ-LQGRIQVKEEGEELPINKETDW-------IYTNATQPLRITG-VDNTNIEISISLKKGNQSHPVDAVVWNPWIKKAKGMGDFGHEEYRRMICVEPGCVSRFETCEPGQTWALEQKIS 302
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: UPI001F04F7E2 (putative glucose-6-phosphate 1-epimerase n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04F7E2) HSP 1 Score: 202 bits (514), Expect = 4.050e-57 Identity = 110/275 (40.00%), Postives = 155/275 (56.36%), Query Frame = 2 Query: 149 VEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
VEV LHG+TVTS+K +G+E+LFVS+ A+FNG KAIRGGIP+VFP FG P + P HG ART TWK+ ++P + G++ A VL +EQT W + F Y + L DD + + + N G + F F TL+HTY ++ +I + K+ G H Y+D+ +ER + VD S+Y ++ + G + P D V+WNPW+ KAK ++DFGD E+ MVC+EPG V K + + P E F KQ IT
Sbjct: 18 VEVYLHGATVTSWKC-KGKEMLFVSKNAVFNGVKAIRGGIPVVFPNFG-PWELGPQHGFARTETWKIHQQPEKDESGNIVAALVLEDTEQTRKIWDYNFKFLYTLTLKDDEFSTEVSIENTGTKGFHFTTLVHTYYNV-DISKMKLRGLHGCEYIDKV--GGGEKKEEREALQISGNVD-------SVYKNTANELLLSTGDHEIRITKENLP---------DTVVWNPWIEKAKQMSDFGDTEYKNMVCVEPGYVAKPYDLRPAEVFKAKQTIT 271
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A6S7GEJ5_PARCT (Glucose-6-phosphate 1-epimerase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GEJ5_PARCT) HSP 1 Score: 199 bits (506), Expect = 5.940e-56 Identity = 107/275 (38.91%), Postives = 161/275 (58.55%), Query Frame = 2 Query: 149 VEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
V V LHG TVTS+K +G+E+LFVS++A+F+G KAIRGGIP+VFP FG P K P HG ARTATWK+ ++P + DG++ A +L +E+T W H F Y + L + ++ +++ N G + F+F +LLHTY ++ +IE+AK++G ++D+ N +E + VD S+Y ++ ++ G + P D V+WNPW KAK ++DFGD E+ M+C+EPG V + P ETF+ KQI+T
Sbjct: 18 VHVYLHGGTVTSWKC-KGKEILFVSKQAVFDGKKAIRGGIPVVFPNFG-PWKLGPQHGFARTATWKVHKQPEKDKDGNIVAVLLLEDTEETRKIWNHNFKFWYTLTLKNCEFSMEVNIQNTGAEDFEFTSLLHTYYNV-DIEKAKLQGLQGCDFLDKV--NGGEHKEENEFLQISANVD-------SVYKQTPNELKLLTGNHNIRITKENFP---------DTVVWNPWFEKAKQMSDFGDNEYQDMICVEPGFVAAPCKLQPNETFTAKQILT 271
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A3M6VKU2_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU2_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.280e-55 Identity = 122/306 (39.87%), Postives = 168/306 (54.90%), Query Frame = 2 Query: 104 TGQPCVALMHPNGGRVEVQLHGSTVTSFKTSEG--REVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSE--EPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKI--EGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDR-------RVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIITPSA 982
T + V L HP+G R +V L+G+TVTSF T++ R VLFVS+KA+ +G+K IRGGIPLVFP FG + P+HG AR WKL + + E + V A F L S+ A +PH F+L YEV L +VL +H+ N E FQ LLHTYLS+ ++ + EG + Y D+ + R F E D VF+R +G+ V T +C+K+ G++ + DVV+WNPW KAK + DFGDEE+ M+C+EPG V + G TF+L+Q I SA
Sbjct: 4 TKESVVELRHPSGSRAQVYLYGATVTSFYTAQEPTRNVLFVSKKALLDGSKPIRGGIPLVFPVFGAAE-GFPNHGFARIHKWKLDQLIQSANEDESPVVATFSLDVSDDIKAMYPHDFALVYEVKLCANVLTTAIHIQNKSEGEISFQALLHTYLSVDDVRGGGVVVEGLKGLMYYDKVAAEEK--IEHRDTLSFCQETDSVYANAPSPVFVRIKRANGKEQVV-----TIEKEACIKS--GSSHMSQDSDVVVWNPWSDKAKEMNDFGDEEYPAMLCVEPGRVSDQQKLLAGHTFTLQQAIKVSA 299
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A662XI35_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI35_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.390e-55 Identity = 119/301 (39.53%), Postives = 170/301 (56.48%), Query Frame = 2 Query: 119 VALMHPNGGRVEVQLHGSTVTSFKTSEG--REVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSE--EPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEI--EEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGV----VGGTKVTNSCVKTA---PGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIITPSA 982
+ L HP+G R EV L+G+TVT+F ++ R VLF+S++A+ +G+K IRGGIPLVFP FG P+HG RT WKLS+ + + D A F + ++ T A +PH F L YEV L + LA LHV N + FQ LLHTYLS ++ E +EG + Y D+ + T++R F E D S+Y+ V V G + + K+A GA++ DVV+WNPW+ KAK++ DFGD+E+ M+C+EPG V + +A G+TF+L+Q I SA
Sbjct: 12 IELRHPSGSRAEVYLYGATVTAFYAAQEPERNVLFLSKQALLDGSKPIRGGIPLVFPVFGSAP-GFPNHGFVRTTNWKLSQLDQTVGDDDSPTVATFAMAATDATKAMYPHDFDLVYEVKLFANSLATALHVHNKSDGEIAFQALLHTYLSADDVRNEAVTVEGLKGLQYHDKVAADEK--TEDRALLSFAQETD-------SVYANAPSPVVVRMKRADGREQVVTIEKSAFIKSGASQTAQDSDVVVWNPWVDKAKAMGDFGDDEYPTMLCVEPGRVSEQQKLAAGQTFTLQQAIKLSA 302
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: UPI00106A87BB (putative glucose-6-phosphate 1-epimerase n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A87BB) HSP 1 Score: 195 bits (496), Expect = 1.700e-54 Identity = 110/287 (38.33%), Postives = 159/287 (55.40%), Query Frame = 2 Query: 113 PCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
P + L + VEV LHG TVTS+K GRE+LFVS+ A++NG KAIRGGIP+VFP FG P + P HG ART TWK+ + P + DG++ A +L +E+ W + F Y + L D + +++ N G + F+F TLLHTY ++ ++E+ KI+G ++D+ TD+ Q + VD S+Y ++ + G + P D V+WNPW KAK ++DFGDEE+H MVC+EPG V + P E+F KQ +T
Sbjct: 6 PKIHLKKDDSSEVEVCLHGGTVTSWKC-RGREMLFVSKNAVYNGKKAIRGGIPVVFPNFG-PWELGPQHGFARTETWKVHKSPEKDEDGNIVAILLLEDTEELRKIWNYNFKFWYTLILKDREFIMEVNIQNTGSKEFEFTTLLHTYFNV-DVEKVKIQGLQGCDFIDKINGGERKETDKYVQ--ISGNVD-------SVYKQTSNELLLFTGDHNIQIKKENFP---------DAVIWNPWSEKAKQMSDFGDEEYHDMVCVEPGYVSSSFKLQPNESFKAKQTLT 271
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A197K0K7_9FUNG (Glucose-6-phosphate 1-epimerase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K0K7_9FUNG) HSP 1 Score: 194 bits (493), Expect = 6.210e-54 Identity = 122/298 (40.94%), Postives = 167/298 (56.04%), Query Frame = 2 Query: 125 LMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDK-----AMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGH---SEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTC--EVDRRVFMRASIYSGEIGDVGVV-----GGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
L HP+G EV L+G+T+TS+ + +E +FVSEKAI +G+KAIRGGIPLVFP FG+ A+P HG AR + WKL + + D V A F L H SE+ WP FSL Y V LA + + L V N G+++FDF TLLHTY I + + K+ G V YVD+ L +A Q D EVD S+Y+ DV + GG +V + DVV+WNPW+AKA +ADFG+EEFHKM+C+E G V +F ++A G ++ Q+++
Sbjct: 12 LTHPSGASAEVYLYGATLTSWNVAN-KERIFVSEKAILDGSKAIRGGIPLVFPVFGKGKAPHVTAALPQHGFARISLWKLLNS-SDDADT-VTAEFGLDHTLISEENRKLWPFDFSLVYTVKLAAETIETKLRVHNVGDKSFDFNTLLHTYFLIPDASKVKVVGLSGVDYVDKVLATTA-----HQQGDIVIKGEVD-------SVYANVKSDVQIPYVAEQGGVQVHLKGLN------------DVVVWNPWVAKAAGMADFGNEEFHKMICVEAGQVAEFIALAAGGSWEGSQVLS 282 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig100.689.1 >prot_C-linearis_contig100.689.1 ID=prot_C-linearis_contig100.689.1|Name=mRNA_C-linearis_contig100.689.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=304bp MVLGVIKGETTGQPCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSback to top mRNA from alignment at C-linearis_contig100:229837..237519+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig100.689.1 ID=mRNA_C-linearis_contig100.689.1|Name=mRNA_C-linearis_contig100.689.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7683bp|location=Sequence derived from alignment at C-linearis_contig100:229837..237519+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig100:229837..237519+ >mRNA_C-linearis_contig100.689.1 ID=mRNA_C-linearis_contig100.689.1|Name=mRNA_C-linearis_contig100.689.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at C-linearis_contig100:229837..237519+ (Chordaria linearis ClinC8C monoicous)back to top |