mRNA_C-linearis_contig100.688.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: D7FTB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB8_ECTSI) HSP 1 Score: 879 bits (2272), Expect = 1.640e-292 Identity = 525/919 (57.13%), Postives = 591/919 (64.31%), Query Frame = 1 Query: 2308 GGGNATELPGPLDVQPVIGVEVELGQVSISNTTKRRSTGLLPSDPN----------SPPL-AATNGDMQQSKMLRPAP------ALSSSSSSSPRSSVPLTTRHPRSAAGNPNDSDNAAVRVLGVLGEVWQEAKAVPRSPSKVATTLSKDGTHGGLNLTPRDSRAGQAARVSDVDSYTKGNK---NSTAALT--PPRQHQELPIASPRARERINNSSGLPQPNLQAGSGNAEKRGHGSFTASCKQ------PDG------------VTSKSSDRALTRYSDCYSRFAAVLTAHHNGXXXXXXXXXRSLPLTSSIMSAGRNGRAAGCEGSRS----GLTVAEEEACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDASALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETGAAQDSPLHHAKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEGELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIRPQPGDDDEP 4932
G G EL GPL VQP+ + +I +T+ + P PN +P L A+ NG + S + P + S+ +S+SPR SVPL + S + + A V V +L E P ++ A K+GT G N + Q R SY+ G+ N++A T PP + A P+ R R S L P + + K A+C Q P G V S L Y+DC+ RFAA+L+AHHNG RSLPLTS I+S GR G R GLT AEEEAC WQWKLY+IHVRVIKDYAAVFSYGDGWS N ++DDSNSLVYSGD+SALHYRVNSKARPEVYNIVTDVLNNRC+QWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKH+SRFMA GGRLA+EFHIMPQTFVLPHEFTLFVSAFT+S +R +NLWIMKPVGMSRGRGIRLIDDIK+I YADKVVLQRY+GNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKG I+NRFIHLTNSSIQRLNE GAA+DSPL+ AK SEAGGTKTTLSYLWRRLAASGVDVGALWA ICSVVVKSLVCVE SIPNQPNSFELFGYDVLIDDRLRPWLIEVN+SPSMARDTHVDRQ KLVD+LGRRL ++SK R FKQ +E G+A+ G S + + RPRR + E +L+ DLD IL GRRPR+VGE PARMGNFVRLCPGTAAHRRARRLRR+VIRPQPGDDD+P
Sbjct: 319 GSGATLELQGPLHVQPLAETRQAEHRSAIRSTSCGALGTVTPQLPNCDADETKQGRNPGLIASANGIVSVSDVDLAGPRRPTGLSPSAPTSASPRLSVPLLSMDLCSPSDGGTGNGCAVVGVEPLLPEPPAPRMYQPEGRNQAAAGR-KEGT--GDNWKAPINSKSQECRDVSKQSYSAGDAIVDNTSARFTVEPP----DAFTAVPQGR-RPRRSGSLTTPPVMGTGDDGSK-------ATCLQAEVPETPGGAAGGDVAGHFEPVEKVPSSNTLATYTDCFPRFAAILSAHHNGRALTRQADCRSLPLTSKILSRGRAGAGGSAANRRGIKGLGLTGAEEEACFHWQWKLYAIHVRVIKDYAAVFSYGDGWSGNGTSDDSNSLVYSGDSSALHYRVNSKARPEVYNIVTDVLNNRCQQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHVSRFMAPGGRLAKEFHIMPQTFVLPHEFTLFVSAFTSSSGTR--------------------------------------------ENLWIMKPVGMSRGRGIRLIDDIKDICYADKVVLQRYIGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGAIDNRFIHLTNSSIQRLNEAGAARDSPLNQAKTSEAGGTKTTLSYLWRRLAASGVDVGALWAEICSVVVKSLVCVESSIPNQPNSFELFGYDVLIDDRLRPWLIEVNASPSMARDTHVDRQ---------------------KLVDILGRRLKETEHSKTRAFKQRHYPHHHQQAFDT--TEVQGDARAGDNVYPSPSAKASASREHQRPRRTRGEADLESDLDQILRGRRPRQVGELPARMGNFVRLCPGTAAHRRARRLRRKVIRPQPGDDDDP 1155
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: A0A6H5L5P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P9_9PHAE) HSP 1 Score: 738 bits (1905), Expect = 8.390e-236 Identity = 460/864 (53.24%), Postives = 526/864 (60.88%), Query Frame = 1 Query: 2239 EWEEGKGNNGATKRIDGRGGXXXGGGNATELPGPLDVQPVIGVEVELGQVSISNTTKRRSTG------LLPSDPNSPP-----------LAATNGDMQQSKMLRPAP------ALSSSSSSSPRSSVPLTTRHPRSAAGNPNDSDNAAVRVLGVLGEVWQEAKAVPRSPSKVATTLSKDGTHGGLNLTPRDSRAGQAARVSDVDSYTKGNK---NSTAALTPPRQHQELPIASPRARERINNSSGLPQPNLQAGSGNAEKRGHGSFTASCKQPD-----GVTSKS-------------SDRALTRYSDCYSRFAAVLTAHHNGXXXXXXXXXRSLPLTSSIMSAGRNGRAAGCEGSRS----GLTVAEEEACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYS------------------GDASALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELT-----------RKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETGAAQDSPLHHAKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQ 4599
EWEE G + D G G E+ GPL VQPV E Q + + +RSTG + P PN +A+ NG + S + AP +LS+ + + PR SV + S + +D A V V +L E P S+ A K+GT G N + Q R SY+ G++ N++A T +H + R R SG P G+G+ + A+C Q + GV + S L Y+DC+ RFAA+L+AHHNG RSLPLTS I+S G+ R GLT EEEACL WQWKLY+IHVRVIKDYAAVFS GDGWS ++D SNSLVYS GD+SALHYRVNSKARPEVYNIVTDVLNNRC+QWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKV + R ++ K+LLNKH+SRFMA GGRLA+EFHIMPQTFVLPHEFTLFVSAFT+S GK +NLWIMKPVGMSRGRGIRLIDDIK+I YADKVVLQRY+GNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDI+NRFIHLTNSSIQRLNE GAA+DSPL+ AK SEAGGTKTTLSYLWRRLAASG+DVGALWA ICSVVVKSLVCVE SIPNQPN +LRPWLIEVN+SPSMARDTHVDRQVKEALIFETVHL+DPLPFDR+KLVD+LGRRL ++SK R FKQ
Sbjct: 516 EWEEVSGQRYGPQDDDCDSDNTEGSGATLEIQGPLHVQPV----AENRQAK--HRSAKRSTGYGSLVTVTPQPPNCDAGETKQGRKPGLIASANGIVCVSDVDLAAPRMPPGLSLSAPTLACPRLSVSSPSMDHCSPSDGETGNDCADVGVEPLLPEPPARRMYPPEGHSQAAAGR-KEGT--GDNWKAHSNPKAQDCRDVSKQSYSAGDEIVDNTSAKFTVEPRHAFATVPQGRRPRR----SGTPP---VTGTGDDGSK------ATCLQVEVPETPGVAASGDVAGHLKPVEKVPSSNTLATYTDCFPRFAAILSAHHNGRALTRQADCRSLPLTSKILSRGKADAGGSAANRRRIKELGLTGVEEEACLYWQWKLYNIHVRVIKDYAAVFSCGDGWSGTGTSDASNSLVYSHFDYNQILASLSKCLLVSGDSSALHYRVNSKARPEVYNIVTDVLNNRCQQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVITVLSVRSMSATDGKHPRPSLNKNLLNKHMSRFMAPGGRLAKEFHIMPQTFVLPHEFTLFVSAFTSSS--------------------------------------------GKRENLWIMKPVGMSRGRGIRLIDDIKDICYADKVVLQRYIGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIDNRFIHLTNSSIQRLNEAGAARDSPLNQAKTSEAGGTKTTLSYLWRRLAASGLDVGALWAEICSVVVKSLVCVESSIPNQPNR----------QVKLRPWLIEVNASPSMARDTHVDRQVKEALIFETVHLIDPLPFDRQKLVDILGRRLDETEHSKTRAFKQ 1303
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: A0A225V5E3_9STRA (Tubulin-tyrosine ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V5E3_9STRA) HSP 1 Score: 442 bits (1136), Expect = 5.730e-136 Identity = 256/583 (43.91%), Postives = 334/583 (57.29%), Query Frame = 1 Query: 3211 LRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDASALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETG-AAQDSPLHHAKISE---------------AGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKE--EGELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
+R Q KLY +++DYA VF + + + + A HYR+NS AR EV IVT+ L++ WEE P+GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ LTRKD L KHI +++A GGRL + F I+P TF+LP E+ FV AF RS R + +GASE KN+WIMKPV +SRGRGI LI+D+ + Y +++V+Q Y+ P LLDG+KFDLRLYVLVTSFN LEA++Y EGF RL T YE DI N F+HLTNSSIQ+ NE+ +P+ K AGGTKTTL+YLWRRLAA GVDV + I VV+K+L+C E IP Q NSF+L GYD+L+D LRPWLIE+NSSPSMARD ++D QVK+A++ +T+ +VDPL FDR KL +V+ RR ++ K RP T PR +E +L+ DL IL G+ PR GE P +GN+ RLCP T + + +L+R +R
Sbjct: 1 MRLQQKLYESWQSIMQDYATVFG------AKIVVPEGMVPIAAAEPWAPHYRINSTARKEVSEIVTEALHHLGGGWEEHPSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYIAAGGRLRQAFDIIPPTFLLPKEYVAFVQAFQE--RSERLKQ----------------SGASET------------------KNIWIMKPVALSRGRGISLINDLSQVIYGEQMVIQEYIAAPRLLDGFKFDLRLYVLVTSFNPLEAYLYNEGFVRLCTQPYEDNDINNIFVHLTNSSIQKDNESAIVGSTNPIARVKKQNQLPNSNNDNESDQKGAGGTKTTLAYLWRRLAAEGVDVEQVKRNIEEVVIKALLCGEDHIPYQVNSFDLLGYDILLDADLRPWLIEINSSPSMARDNNLDYQVKDAMMVDTLRVVDPLHFDRAKLAEVIARRQRDLEDEKRRPHAN-----------------------------------------TRHPRETEELTARQLNEDLTAILRGKIPRAYGEMPENIGNYRRLCPYTTIYNQLVKLKRSCLR 500
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: D0N8L1_PHYIT (Tubulin polyglutamylase, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0N8L1_PHYIT) HSP 1 Score: 434 bits (1117), Expect = 1.260e-133 Identity = 251/569 (44.11%), Postives = 321/569 (56.41%), Query Frame = 1 Query: 3211 LRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDAS--ALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETGAAQDSPLHHAKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
+R Q KLY +++DYA VF P +V A A HYR+NS AR EV IVT L WE+ P+GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ TRKD L KHI +++A GG+L + F I+P TF+LP E+ FV AF RS R R V A KN+WIMKPV +S+GRGI L++D+ + Y ++VV+Q Y+ P LLDG+KFDLRLYVLVTSFN LEAF+Y EGF RL T YE DI N F+HLTNSSIQ+ N+ I++ GGTKTTL+YLWRRLAA GVDV + I VV+K+L+C E IP Q NSF+L GYD+L+D LRPWLIE+NSSPSMARD +D QVK+A++ +T+ +VDPL FDR KL +V+ RR + K RP T PR +E +L+ DL IL G+ PR GE P +GN+ R+CP T + +L+R +R
Sbjct: 1 MRLQQKLYESWQSIMQDYATVFG--------PRIVAPEGMVPIAAAKPWAPHYRINSTARKEVAEIVTQALLRLGGGWEDHPSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKAFTRKDCLKKHIGKYLAAGGKLRQAFDIIPPTFLLPKEYVSFVQAFQE--RSERLRRNGVSEA----------------------------------KNIWIMKPVALSQGRGISLVNDLGQVIYGEQVVIQEYIAAPRLLDGFKFDLRLYVLVTSFNPLEAFLYDEGFVRLCTRPYEDSDISNIFVHLTNSSIQKENQEA-----------ITDTGGTKTTLAYLWRRLAAEGVDVKQVKRSIEEVVLKALLCGEDHIPFQVNSFDLLGYDILLDADLRPWLIEINSSPSMARDIDLDYQVKDAMMLDTLRVVDPLHFDRAKLAEVIARRQRDQEEEKRRPHAH-----------------------------------------TRHPRETEELAARQLNEDLTAILRGKVPRAYGEMPEDIGNYRRMCPHTNIYNHLVKLKRSCLR 473
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: A0A662X3H0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3H0_9STRA) HSP 1 Score: 439 bits (1128), Expect = 2.050e-131 Identity = 258/605 (42.64%), Postives = 332/605 (54.88%), Query Frame = 1 Query: 3202 EACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDASAL--HYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNE--------------------TGAAQDSPLHH-------------AKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
E LR Q KLY +++DYA VF P ++ + + HYR+NS AR EV +IVTD L WEE P+GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ LTRKD L KHI +++A GGRL + F I+P TF+LP E+ FV AF A G R +SG + G +N+WIMKPV +SRGRGI L++D+ + Y D+VV+Q Y+ P LLDG+KFDLRLYVLVTSFN LEAF+Y EGF RL T YE GD+ N F+HLTNSSIQ+ N+ G++ H A SEAGGTKTTL+YLWRRL A G DV + I VV+K+L+C E IP Q NSF+L GYD+L+D LRPWLIE+NSSPSMARD +D QVK+A++ +T+ +VDPL FDR +L +V+ RR + K RP PR +E +L+ DL IL GR PR GE P +GN+ RLCP T+ + + +L+R +R
Sbjct: 235 EHTLRLQLKLYESWQSIMQDYATVFG--------PKIAAPEGMMPAAAVTPWTPHYRINSTARKEVCDIVTDALKCLGGGWEEHPSGLGLKTTWNLLWTWSKPRVERQTLLAWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGRLRQAFDIIPPTFLLPKEYVAFVQAFQARGERLR-----------------------------ESGVAEG-------RNVWIMKPVALSRGRGISLVNDLSQVIYGDQVVVQEYIARPRLLDGFKFDLRLYVLVTSFNPLEAFLYDEGFVRLCTRPYEDGDLTNLFVHLTNSSIQKDNQDAIAGSANPIASVMAEADSGAGSSSXXXXKHXXXSLENESKGPGASQSEAGGTKTTLAYLWRRLEAEGADVAQVKRDIDEVVLKALLCGEDHIPFQVNSFDLLGYDILLDADLRPWLIEINSSPSMARDNDLDFQVKDAMMLDTLRVVDPLHFDRTRLAEVIARRQHDLEAEKRRPHAN-----------------------------------------MRHPREAEELATRQLNEDLTAILRGRVPRAYGELPEAVGNYRRLCPHTSTYNQLVKLKRSCLR 754
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: K3W656_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W656_GLOUD) HSP 1 Score: 450 bits (1158), Expect = 2.280e-131 Identity = 252/584 (43.15%), Postives = 337/584 (57.71%), Query Frame = 1 Query: 3157 AGCEGSRSGLT------VAEEEACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDASALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETGA-AQDSPLHHAKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRAR 4881
A SR LT + LR Q KLY +++DYA VF G V PS S++ S S HYR+NS R EV +IV L+ + WEE P+GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ LTRKD L K++ +++A+GG++ + ++P TF+LP E+ FV A+ +D +A + D G KN+WIMKPV +SRGRGI L++D+ + Y ++VV+Q Y+ NPLLLDGYKFDLRLYVLVTSFN LEAF Y EGF R+ T +YE D+ N F+HLTNSSIQ+ N+ ++P++ A E GGTK TL+YLWRRL A G DV + I V++KSL+C E IP Q NSF+L+GYD+L+DD RPWLIE+NSSPSMAR+ +D QVK+ALI +T+ LV+PL FDR K VD++ RRL +N K RP P++ +E +L+ DL IL G PR G+ PA +G++ R+CP T + +AR
Sbjct: 631 AASSSSRESLTNTPPVAAPHNDQSLRLQLKLYESWQSIMQDYATVFG---GNIVTPS-----SMLPSPSPSTAHYRINSTTRREVSDIVIHALD-KLGDWEEHPSGLGLKTTWNLLWTWSKPRVERKTLLAWQKVNHFQHAKALTRKDCLKKNMGKYLAMGGKMKAAYDVIPLTFILPQEYIAFVQAY-----------------------QDKSARLANKD-------------GSTHKNIWIMKPVALSRGRGISLVNDLSQVVYGEQVVIQEYIANPLLLDGYKFDLRLYVLVTSFNPLEAFFYDEGFVRMCTRQYEDSDLSNLFVHLTNSSIQKENQEAIKTSNNPINAAAGEEVGGTKMTLAYLWRRLEAMGADVEKVKNEIIEVILKSLMCGEDHIPFQVNSFDLYGYDILLDDTFRPWLIEINSSPSMARENELDYQVKDALILDTIKLVNPLRFDRTKFVDIVSRRLQDLENEKKRPHAH-----------------------------------------IRHPKQAEELAIRQLNEDLTEILHGEAPRNFGDMPAHLGSYRRICPHTTTYNQAR 1128
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: W2PH88_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PH88_PHYPN) HSP 1 Score: 447 bits (1151), Expect = 1.420e-130 Identity = 257/582 (44.16%), Postives = 333/582 (57.22%), Query Frame = 1 Query: 3193 AEEEACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDAS--ALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETG-AAQDSPL------HHAKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
A E +R Q KLY + +++DYA VF P +V A A HYR+NS AR EV IVT L WE+ P GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ LTRKD L KHI +++A GG+L + F I+P TF+LP E+ FV AF G + +SG S + KN+WIMKPV +SRGRGI L++D+ ++ Y ++VV+Q Y+ P LLDGYKFDLRLYVLVTSFN LEAF+Y+EGF RL T YE DI N F+HLTNSSIQ+ NE +P+ + A +AGGTKTTL++LWRRLAA GVDV + I VV+K+L+C E IP Q NSF+L GYD+L+D LRPWLIE+NSSPSMARD +D QVK+A++ +T+ +VDPL FDR KL +V+ RR ++ K RP T PR +E +L+ DL IL G+ PR GE P +GN+ RLCP T + + +L+R +R
Sbjct: 632 ATGEHTMRLQQKLYESWLSIMQDYATVFG--------PKILVPEGMVPVAAAKPWAPHYRINSTARKEVAEIVTQALQLLGGGWEDHPAGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGKLRQAFDIIPPTFLLPKEYVSFVQAFQERGERLK-----------------------------RSGLS-------EAKNIWIMKPVALSRGRGISLVNDLSHVIYGEQVVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLAAEGVDVEQVKRSIEEVVLKALLCGEDHIPFQVNSFDLLGYDILLDADLRPWLIEINSSPSMARDNDLDYQVKDAMMLDTIRVVDPLHFDRVKLAEVIARRQRDQEDEKRRPHAH-----------------------------------------TRHPREAEEMAARQLNEDLTAILRGKIPRAYGEIPENIGNYRRLCPHTTIYNQLVKLKRSCLR 1128
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: A0A329RHQ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RHQ2_9STRA) HSP 1 Score: 445 bits (1145), Expect = 1.200e-129 Identity = 256/582 (43.99%), Postives = 327/582 (56.19%), Query Frame = 1 Query: 3202 EACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDAS--ALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNE----------TGAAQDSPLHHAKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
E +R Q KLY +++DYA VF P +V A A HYR+NS AR EV IVT L WE+ P+GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ LTRKD L KH+ +++A GGRL + F I+P TF+LP E+ FV AF RS R R A KN+WIMKPV +SRGRGI L++D+ + Y ++V++Q Y+ P LLDG+KFDLRLYVLVTSFN LEAF+Y EGF RL T YE DI N F+HLTNSSIQ+ NE A ++ A +AGGTKTTL+YLWRRLAA GV+V + I VV+K+L+C E IP Q NSF+L GYD+L+DD LRPWLIE+NSSPSMARD +D QVK+A++ +T+ +VDPL FDR KL +V+ RR ++ K RP T PR +E +L+ DL IL G PR GE P +GN+ RLCP T + + +L+R +R
Sbjct: 647 EHTMRLQQKLYESWQSIMQDYATVFG--------PKIVAPEGMVPVAAAKPWAPHYRINSTARKEVSEIVTQALQRVGGGWEDHPSGLGLKTTWNLLWTWSKPRVERQTLLVWQKVNHFQHAKALTRKDCLKKHVGKYLAAGGRLRQAFDIIPPTFLLPKEYVSFVQAFQE--RSERLKRSGFSEA----------------------------------KNIWIMKPVALSRGRGISLVNDLSQVIYGEQVIIQEYIAAPRLLDGFKFDLRLYVLVTSFNPLEAFLYNEGFVRLCTRPYEASDISNIFVHLTNSSIQKDNEEAIAGSANPIASALKEEEKTEASQKDAGGTKTTLAYLWRRLAAEGVNVEKVKRSIEEVVLKALLCGEDQIPFQVNSFDLLGYDILLDDDLRPWLIEINSSPSMARDNELDYQVKDAMMLDTLRVVDPLHFDRAKLAEVIARRQRDQEHEKRRPHAH-----------------------------------------TRHPRETEELAARQLNEDLTAILRGEVPRAYGEIPENIGNYRRLCPHTTIYNQLVKLKRSCLR 1143
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: H3GRE1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRE1_PHYRM) HSP 1 Score: 446 bits (1146), Expect = 1.410e-129 Identity = 262/596 (43.96%), Postives = 330/596 (55.37%), Query Frame = 1 Query: 3193 AEEEACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDAS--ALHYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNETG-AAQDSPLHHAKISE--------------------AGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
A E +R Q KLY ++ DYA VF P +V + A+ A HYR+NS AR EV IVT L WE+ P+GLGLKTTWNLLWTWSKP ++ +LL WQKVNHF +++ LTRKD L KHI +++A GGRL F I+P TF+LP E+ FV AF R +SG S G KN+WIMKPV +SRGRGI L++D+ + Y ++VV+Q Y+ P LLDG+KFDLRLYVLVTSFN LEAF+Y EGF RL T YE GD+ N +HLTNSSIQ+ NE A +P+ A E AGGTKTTL+YLWRRLAA GVDV + I VV+K+L+C E IP Q NSF+L GYD+L+D LRPWLIE+NSSPSMARD +D QVK+A++ +T+ +VDPL FDR KL +V+ RR ++ K RP T PR +E +L+ DL IL GR PR GE P +GN+ RLCP T H + +L+R +R
Sbjct: 654 ANGEHTMRLQQKLYESWQSIMHDYATVFG--------PKIVAPEGMVPAAAATPWAPHYRINSTARKEVSEIVTQALQRLGGDWEDHPSGLGLKTTWNLLWTWSKPRVERQTLLAWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGRLRHAFDIIPPTFLLPKEYVAFVQAFQERSERLR-----------------------------QSGFSEG-------KNIWIMKPVALSRGRGISLVNDLSQVIYGEQVVIQEYIAAPRLLDGFKFDLRLYVLVTSFNPLEAFLYDEGFVRLCTRPYEDGDLSNILVHLTNSSIQKDNEDAIAGSANPIASAMKEETGLRSHEVDGCKESSSAQIDAGGTKTTLAYLWRRLAAEGVDVDQVKRTIEEVVLKALLCGEDHIPFQVNSFDLLGYDILLDADLRPWLIEINSSPSMARDNDLDYQVKDAMMLDTLRVVDPLHFDRAKLAEVIARRQRELEDEKRRPHAH-----------------------------------------TRHPREAEELAARQLNADLTAILRGRVPRAYGEIPENIGNYKRLCPHTTIHNQLVKLKRSCLR 1164
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Match: A0A662WHA2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHA2_9STRA) HSP 1 Score: 446 bits (1148), Expect = 1.560e-129 Identity = 264/608 (43.42%), Postives = 339/608 (55.76%), Query Frame = 1 Query: 3202 EACLRWQWKLYSIHVRVIKDYAAVFSYGDGWSVNPSTDDSNSLVYSGDASAL-----HYRVNSKARPEVYNIVTDVLNNRCEQWEELPTGLGLKTTWNLLWTWSKPHIQYSSLLTWQKVNHFPNSRELTRKDLLNKHISRFMALGGRLAREFHIMPQTFVLPHEFTLFVSAFTASGRSRRGGRGSVDAAWGGSRDEDDTAGASENDGDWKSGQSRGSTRGGKEKNLWIMKPVGMSRGRGIRLIDDIKNISYADKVVLQRYVGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIENRFIHLTNSSIQRLNE--------------------TGAAQDSPLHH-------------AKISEAGGTKTTLSYLWRRLAASGVDVGALWAGICSVVVKSLVCVEVSIPNQPNSFELFGYDVLIDDRLRPWLIEVNSSPSMARDTHVDRQVKEALIFETVHLVDPLPFDRKKLVDVLGRRLSANDNSKARPFKQHXXXXXXXXXXXXXXSETSGNAQEGGTDSTSGQPPTATGDQTHRPRRCKEEG--ELDRDLDGILCGRRPRRVGEPPARMGNFVRLCPGTAAHRRARRLRRRVIR 4905
E LR Q KLY +++DYA VF P +V A+A+ HYR+NS AR EV +IVTD L WEE P+GLGLKTTWNLLWTWSKP ++ +LLTWQKVNHF +++ LTRKD L KHI +++A GGRL + F I+P TF+LP E+ FV AF A G R +SG + G KN+WIMKPV +SRGRGI L++D+ ++ Y D+VV+Q Y+ P LLDG+KFDLRLYVLVTSFN LEAF+Y EGF RL T YE GD+ N F+HLTNSSIQ+ N+ TG++ +S H A SEAGGTKTTL+YLWRRL A G DV + I VV+K+L+C E IP Q NSF+L GYD+L+D LRPWLIE+NSSPSMARD +D QVK+A++ +T+ +VDPL FDR +L +V+ RR + K RP PR +E +L+ DL IL GR PR GE P +G++ RLCP T+ + + +L+R +R
Sbjct: 679 EHTLRLQLKLYESWQSIMQDYATVFG--------PKIVAPEGMV---PAAAMTPWTPHYRINSTARKEVCDIVTDALKCLGGDWEEHPSGLGLKTTWNLLWTWSKPRVERQTLLTWQKVNHFQHAKALTRKDCLKKHIGKYLAAGGRLRQAFDIIPPTFILPKEYVAFVQAFQARGERLR-----------------------------ESGVAEG-------KNVWIMKPVALSRGRGISLVNDLSHVIYGDQVVVQEYIARPRLLDGFKFDLRLYVLVTSFNPLEAFLYDEGFVRLCTRPYEDGDLTNLFVHLTNSSIQKDNQDAIAGSANPIASAMAQADIGTGSSSNSGSKHGSSSLENETKGPGASQSEAGGTKTTLAYLWRRLEAEGADVAQVKRDIDEVVLKALLCGEDHIPFQVNSFDLLGYDILLDADLRPWLIEINSSPSMARDNDLDFQVKDAMMLDTLRVVDPLHFDRARLAEVIARRQHDLEAEKRRPHAN-----------------------------------------MRHPREAEELATRQLNEDLTAILRGRVPRAYGELPEAVGSYRRLCPHTSTYNQLVKLKRSCLR 1198 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig100.688.1 >prot_C-linearis_contig100.688.1 ID=prot_C-linearis_contig100.688.1|Name=mRNA_C-linearis_contig100.688.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1612bp MCQHTSGKDDPVAGYARIQRERTSAILSGRAAQARVQALLAGTAFVGRERback to top mRNA from alignment at C-linearis_contig100:213865..229155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig100.688.1 ID=mRNA_C-linearis_contig100.688.1|Name=mRNA_C-linearis_contig100.688.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15291bp|location=Sequence derived from alignment at C-linearis_contig100:213865..229155- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig100:213865..229155- >mRNA_C-linearis_contig100.688.1 ID=mRNA_C-linearis_contig100.688.1|Name=mRNA_C-linearis_contig100.688.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9672bp|location=Sequence derived from alignment at C-linearis_contig100:213865..229155- (Chordaria linearis ClinC8C monoicous)back to top |