mRNA_C-linearis_contig100.685.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: D7FTB5_ECTSI (Inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTB5_ECTSI) HSP 1 Score: 690 bits (1781), Expect = 1.970e-242 Identity = 355/393 (90.33%), Postives = 368/393 (93.64%), Query Frame = 3 Query: 129 LQRAALAALMV--GSASGFVLPQASMNGLRAGPAPAAARSSSALRMADEPLGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC 1301 +Q A+ ALM S S FVLPQAS N L A +A+R++S LRMA+EPLGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEK PISFDVPTIDVAL+ VADNDVKLLLGFQRRFDSNFRTIREKIN G IGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEI+EVFVTATAFDPEAKEADD+DTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFG GGS+SGANRSPQ+VLVN EDGLNAGVPYSFFLDRYADSYVNIMSAFV +VKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC Sbjct: 2 MQSGAMLALMATCSSCSAFVLPQASFNRLPTA-ASSASRAASPLRMAEEPLGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEK--PISFDVPTIDVALKAVADNDVKLLLGFQRRFDSNFRTIREKINEGTIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIDEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGAGGSISGANRSPQNVLVNNEDGLNAGVPYSFFLDRYADSYVNIMSAFVKYVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC 391
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A6H5JF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF67_9PHAE) HSP 1 Score: 539 bits (1389), Expect = 7.090e-185 Identity = 270/285 (94.74%), Postives = 277/285 (97.19%), Query Frame = 3 Query: 447 MVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC 1301 MVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEK PISFDVPTIDVAL+ VADNDVKLLLGFQRRFDSNFRTIREKIN G IGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEI+EVFVTATAFDPEAKEADD+DTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFG GGS+SGANRSPQ+VLVN +DGLNAGVPYSFFLDRYADSYVNIMSAFV +VKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC Sbjct: 1 MVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEK--PISFDVPTIDVALKAVADNDVKLLLGFQRRFDSNFRTIREKINEGTIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIDEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGAGGSISGANRSPQNVLVNNKDGLNAGVPYSFFLDRYADSYVNIMSAFVKYVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC 283
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: W7T7P4_9STRA (Myo-inositol 2-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7P4_9STRA) HSP 1 Score: 395 bits (1016), Expect = 6.030e-127 Identity = 199/346 (57.51%), Postives = 257/346 (74.28%), Query Frame = 3 Query: 252 LRMADEPLGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVK-TGDESLEP-ALGIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 LRM+ PLGVGVIGCGRIG IH+ TLAFRTPGA+LVA++D FE+ G +V++ G+P ++K++ +++ + ++ A+VV SPTP+H EQI+ A + GKH+FCEK PIS D+ TID ++ A KL+LGFQRRFD+NF+ ++++I GAIG VRTI I SRDPAPPP YL+ SGGIF+DM+SHDFDMARFLVG +IEEVFV TA+ PEA A D DT T L+F+NG FG +ENSR CSFGYDQRVEVFG+ GS+ G NRSP V + +G+ AG+PYSFF+DRY D+YV+I+ AFV V G +E A DGK T+ GMAA S + R VK+SE+ Sbjct: 64 LRMSQSPLGVGVIGCGRIGQIHSNTLAFRTPGARLVAITDPFEDMGKKVLDQTGGIPSYHKNYLDLLDEEDIKAVVVASPTPYHVEQIMAAVERGKHVFCEK--PISNDLATIDSCIEAAAKAGTKLILGFQRRFDANFQAVKQQIVQGAIGKVRTIRIVSRDPAPPPADYLKTSGGIFLDMSSHDFDMARFLVGSDIEEVFVQGTAWGPEAAGAGDLDTQITLLRFENGVFGTLENSRLCSFGYDQRVEVFGELGSLQGENRSPSTVTRSDAEGVTAGLPYSFFMDRYGDAYVDIVRAFVREVSGDGGGGVEHLASAADGKATVMAGMAAKASVQGRRLVKVSEM 407
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A5J4YNW9_PORPP (Putative oxidoreductase YrbE n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNW9_PORPP) HSP 1 Score: 376 bits (966), Expect = 5.310e-120 Identity = 194/351 (55.27%), Postives = 248/351 (70.66%), Query Frame = 3 Query: 243 SSALRMADEP----LGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 + ALRMAD +G+GVIGCGRIG +HAK++A GA LVAVSD+FEE G ++ ++ KDWK+MV DP + +V+GSPTPFHAEQI+ A GK IFCEK PIS D+ ID L V + +L++GFQRRFDSNF I+++I AGAIG VR I SRDPAPPP YL+ SGGIF+DM SHDFDMARF+ G EI+EV+V TAFDPEAK A+D D+ LK +G+FG I+NSRRC+ GYDQR+EVFG+ G ++G N++P V +++ G+ AG+PYSFF+DRY D+Y + AFV VKTG + P G DG+ I AA+ SAKE RPVK+SE+ Sbjct: 32 TQALRMADAAAGSGVGIGVIGCGRIGQVHAKSVA-AAKGATLVAVSDVFEEFGLKLANAYG--VEYEKDWKKMVEDPRIQGVVIGSPTPFHAEQIMACAAAGKDIFCEK--PISNDLAVIDECLAAVEKSKSRLMVGFQRRFDSNFLNIKKQIEAGAIGPVRMFQIVSRDPAPPPQEYLEKSGGIFLDMASHDFDMARFVTGAEIDEVYVCGTAFDPEAKGANDLDSLIMTLKMSDGSFGTIQNSRRCALGYDQRIEVFGRDGILTGNNKAPNTVTLSSATGVQAGLPYSFFMDRYLDAYAGAIDAFVEMVKTG--APPPCTGADGRAPIVAAKAASLSAKENRPVKLSEV 375
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A2V3J1X4_9FLOR (Putative oxidoreductase YrbE n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1X4_9FLOR) HSP 1 Score: 372 bits (955), Expect = 3.310e-118 Identity = 185/336 (55.06%), Postives = 248/336 (73.81%), Query Frame = 3 Query: 273 LGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISE 1280 +G+GVIGCGRIG +HA+T++ + A L+AV+D FE+ G V + + ++ W++++ + +V IV+GSPTPFHAEQII++A+ GK IFCEK PIS D+ ID L VA N V+LL+GFQRRFDSNF ++RE++ +GAIG VR HITSRDPAPPP YL SGGIF+DMTSHD+DMARF+ G EIE V+VT AF+ AK+ADD DTA T LK +G+FG I+NSRRCS+GYDQR+EVFG G+++ NR+P V+ + E G++AG+PYSFF+DRYA++Y M+ FVN + G P G+DG+ +I MAAA+S KEGR V++ E Sbjct: 51 VGIGVIGCGRIGQVHARTIS-QLNSASLIAVADPFEKFGRMVAK--DFATQWTPKWEDLLTNDDVQGIVIGSPTPFHAEQIIKSAEAGKDIFCEK--PISNDLAVIDKCLDAVAANGVRLLVGFQRRFDSNFASVREQVASGAIGQVRMFHITSRDPAPPPAEYLAQSGGIFLDMTSHDWDMARFITGAEIESVYVTGAAFEDAAKQADDIDTAITVLKMSDGSFGTIDNSRRCSYGYDQRIEVFGSTGTINSNNRAPNTVVTSNEMGISAGLPYSFFMDRYAEAYSGAMTTFVNMISNGTPP--PCTGLDGRASIVAAMAAAKSHKEGRAVRLEE 379
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A7J7ILE1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILE1_9RHOD) HSP 1 Score: 369 bits (948), Expect = 2.430e-117 Identity = 186/337 (55.19%), Postives = 241/337 (71.51%), Query Frame = 3 Query: 273 LGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 +G+GVIG GRIG +HA T+A R A+L ++D E AG +V EG K++ D++ ++ DP V +V+GSPTPFHAEQ++ AA+ GKHIFCEK PIS D+ TID L+ V VKLL+GFQRRFDSNFR IRE+I GAIG VR HI SRDPAPPP YL SGGIF+DM SHD+DMARF+ G EIE+V+V AFDPEA+ A+D DT T L+ GAFG I+N+RRC++GYDQR+EVFG GS++G N+S V+ +DG G PY FF+DRY ++Y NIM+AFV+ ++ E P G+DG+ + MAAARS +E RPV++SE+ Sbjct: 41 VGIGVIGAGRIGQVHAATIA-RLLNAELRGIADPIESAGRKVAEGFQ--TKYFGDYRALLQDPGVHGVVIGSPTPFHAEQMMAAAEAGKHIFCEK--PISNDLATIDRCLEVVRSKGVKLLVGFQRRFDSNFRHIREQIERGAIGQVRMFHIHSRDPAPPPAEYLAKSGGIFLDMCSHDYDMARFVTGQEIEQVYVVGKAFDPEAQAANDLDTQVTVLRMSGGAFGTIDNARRCAYGYDQRIEVFGAEGSLTGMNKSSHTVVAAGKDGYQLGRPYDFFMDRYLEAYGNIMAAFVDMIERDTEP--PVSGLDGRAPVLAAMAAARSVQENRPVRLSEV 370
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A1X6NLA5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLA5_PORUM) HSP 1 Score: 368 bits (945), Expect = 1.410e-116 Identity = 194/341 (56.89%), Postives = 240/341 (70.38%), Query Frame = 3 Query: 261 ADEPLGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 A + +G+G+IGCGRIG +HAK ++ T GAKLVAV+D FE+ G V + + DWKE+V +PEV +V+GSPTPFHAEQII A+ GK IFCEK PIS D+ TID L+ V + VKLL+GFQRRFDSNF+ ++ +++GAIGDVRT ITSRDPAPPP YL SGGIF+DM SHDFDMARF+ G EIE VFVT A + A+EA D DT T LK NGAFG IENSRRC FGYDQRVEVFG GSV G+N++ V VNT+ G+++ +P+ FF+DRYA +Y IM AFV+ V E P G DG+ I AA S KEGR V++ E+ Sbjct: 53 APKTVGIGIIGCGRIGQVHAKAIS-STLGAKLVAVADPFEKFGRAVASEFSTT--WVADWKELVANPEVDGVVIGSPTPFHAEQIIACAEAGKAIFCEK--PISNDLATIDNCLEAVDKSGVKLLVGFQRRFDSNFQKVKSVVSSGAIGDVRTFTITSRDPAPPPADYLAKSGGIFLDMASHDFDMARFVCGAEIESVFVTGAAIESAAQEAGDLDTVITVLKMSNGAFGTIENSRRCGFGYDQRVEVFGGKGSVIGSNKANDTVTVNTDSGIDSSLPFDFFMDRYAAAYTGIMGAFVDMVAQDGEV--PVGGADGRAPIVAAKAAQLSVKEGRLVRLDEV 386
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A7S2ZAH6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAH6_9RHOD) HSP 1 Score: 365 bits (936), Expect = 8.600e-116 Identity = 185/345 (53.62%), Postives = 246/345 (71.30%), Query Frame = 3 Query: 252 LRMADEPLGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPAL-GIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 +RM+ EP+G+GVIGCGRIG +HAKTLA + A+LV ++D + V + F D+K++V+DP V +V+GSPTP+HAEQII +A+ GK IFCEK PIS D+ ID L+ V D V+LL GFQRRFD NFR ++++I GAIGDVR HITSRDP+PPP YL+ SGGIF+DM SHDFDMARF+ EI+EVFVT AF PEA EA+D+D+ T L+ KNG+FG IENSR C+FGYDQR+EVFG G+++G NR P +V+++ +G+ +G+P+SFF+DRY + Y +IM+ FVN + EP++ G DG+ I MA SA E RPV + E+ Sbjct: 20 VRMSAEPVGIGVIGCGRIGQVHAKTLA-ASMDAQLVVMADPVVDFAEPVAKSFGA--DFVPDYKDLVNDPRVRGVVIGSPTPYHAEQIIASAEAGKDIFCEK--PISNDLEVIDKCLKVVEDKGVRLLTGFQRRFDPNFRKVKQEILNGAIGDVRMFHITSRDPSPPPAEYLKKSGGIFLDMISHDFDMARFVSQSEIDEVFVTGKAFGPEAAEAEDFDSVVTMLRMKNGSFGTIENSRSCAFGYDQRIEVFGSKGTLTGNNRGPSEVVLSNSEGITSGLPFSFFMDRYTEGYRDIMTEFVNMIVN---QKEPSVDGYDGRAPILAAMACKLSAAENRPVLLKEV 356
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: M2X2D7_GALSU (Myo-inositol 2-dehydrogenase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2D7_GALSU) HSP 1 Score: 366 bits (940), Expect = 2.150e-115 Identity = 184/337 (54.60%), Postives = 242/337 (71.81%), Query Frame = 3 Query: 273 LGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVEGCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 LG+GVIGCGRIG IHAKTLA + G KL+ V+D E G ++ E C ++Y D+++M+ DP++ A+V+GSPT FHAEQ+ AK GK IFCEK PIS D+ ID LQ V +V+L +GFQRRFD+NF+ I+ ++ G+IG++R HI SRDPAPP YL NSGGIF+DMTSHDFDMARF+ G EI++VFV+ AFD EAK+A+D DT HL+ KNG+ G I+NSRRCS+GYDQR+EVFG GS+ G N SP V+ + + GL+ P+SFF+DRY +YV+IM AF+ ++ G S P G DG+ + +AAARS KE RP+ +SEI Sbjct: 92 LGIGVIGCGRIGRIHAKTLA-QEAGVKLIGVADPIESVGRQLAEACQ--TRWYGDYRQMLQDPQLQAVVIGSPTSFHAEQLKYVAKAGKDIFCEK--PISNDLGVIDDCLQVVEKANVRLFIGFQRRFDTNFKAIKAQVEDGSIGELRMFHIHSRDPAPPTAEYLANSGGIFLDMTSHDFDMARFITGSEIDQVFVSGNAFDDEAKQANDLDTVIIHLRMKNGSMGTIDNSRRCSYGYDQRIEVFGSKGSLLGNNISPNQVIWSNDQGLHQSRPHSFFMDRYEKAYVHIMQAFLEMLRKGMPS--PVDGKDGRAPVVAALAAARSWKENRPIALSEI 421
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Match: A0A7S1TMJ0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMJ0_9RHOD) HSP 1 Score: 362 bits (930), Expect = 6.040e-115 Identity = 186/339 (54.87%), Postives = 239/339 (70.50%), Query Frame = 3 Query: 273 LGVGVIGCGRIGDIHAKTLAFRTPGAKLVAVSDIFEEAGARVVE--GCNGLPKFYKDWKEMVHDPEVGAIVVGSPTPFHAEQIIEAAKLGKHIFCEKARPISFDVPTIDVALQTVADNDVKLLLGFQRRFDSNFRTIREKINAGAIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDYDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGKGGSVSGANRSPQDVLVNTEDGLNAGVPYSFFLDRYADSYVNIMSAFVNFVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEI 1283 +G+GV+GCGRIG +HA +A PGAKLV VSD FE+AG +V + G P D+K ++ DP V +V+GSPTP+HAEQI+ A GK IFCEK PIS D+ ID ++ V VKL++GFQRRFDSNF I+ +I AG IG+VR I SRDPAPPP YL+ SGGIF+DM SHDFDMARF+ G EIEEV+V TAFDPEAK A+D D+ T LK NG FG I+NSRRC+ GYDQR+EVFG G ++G N++P V ++ G+ + +PYSFF+DRY D+Y N M AFV+ +K ++ P DG+ +I + AA+ SAKEGRPVK+SE+ Sbjct: 26 VGLGVLGCGRIGVVHAGAIA-AMPGAKLVMVSDPFEQAGRKVQDMFGVEWTP----DFKTLIDDPRVQGVVIGSPTPYHAEQIMACAAAGKDIFCEK--PISNDLAVIDECIEAVQKAGVKLMVGFQRRFDSNFGEIKRQIEAGTIGEVRMFQIVSRDPAPPPQEYLEKSGGIFLDMASHDFDMARFITGAEIEEVYVCGTAFDPEAKGANDLDSVITTLKMSNGTFGTIQNSRRCALGYDQRIEVFGSDGVLTGQNKAPNTVQLSNNKGIQSPLPYSFFMDRYLDAYSNAMRAFVDMIKK--DAPAPVTFTDGRASIVVARAASLSAKEGRPVKLSEV 355 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig100.685.1 >prot_C-linearis_contig100.685.1 ID=prot_C-linearis_contig100.685.1|Name=mRNA_C-linearis_contig100.685.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=395bp MCGLQRAALAALMVGSASGFVLPQASMNGLRAGPAPAAARSSSALRMADEback to top mRNA from alignment at C-linearis_contig100:188631..195131+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig100.685.1 ID=mRNA_C-linearis_contig100.685.1|Name=mRNA_C-linearis_contig100.685.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6501bp|location=Sequence derived from alignment at C-linearis_contig100:188631..195131+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig100:188631..195131+ >mRNA_C-linearis_contig100.685.1 ID=mRNA_C-linearis_contig100.685.1|Name=mRNA_C-linearis_contig100.685.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2370bp|location=Sequence derived from alignment at C-linearis_contig100:188631..195131+ (Chordaria linearis ClinC8C monoicous)back to top |