mRNA_C-linearis_contig10.675.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E) HSP 1 Score: 486 bits (1251), Expect = 1.850e-146 Identity = 416/1318 (31.56%), Postives = 577/1318 (43.78%), Query Frame = 1
Query: 1 CQYCHAWKWHEESLN---CCSSGKYVAEPLIPLPPDVELLYRTRHFLDNQRRYNGLFSFTAMGAAPTPTWSQPSYPSMLQLHGRAYHRVMDAFRSTYSENVPAVNKARLYMYDSEMLQHADKQKALNRSVVESLSASLYANNSWIRTYRSVLLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKETPPYTSRTMSTNSDKHVKIWTFCRQRLLCEKAFKILSVVAQEYACDAYSRQEDSVLDFIGSNKTQR-RITTYKALSSAV---GTASTGK-KLPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDITNG-LFGKATYFLSVIEFQKRGMPHAHIIVKYPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYVETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMARARVLY--DGNEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVVHDE----------------------------------------DTTEQ----------------QR-----------------------------------RTL-----------------------------------------------------AATLWDAHNGNLMSDHLCHMSQSS-ALDRTLRDIDLMLRKHGKTTESVGLPRVEHPDTEYHRLLAAFDRADMRAEADNLIPQLNSEQRSVFDAVTTSVES-NSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAE-------------------------------------------------------------------------------RFRLVQSMRDRLDLPYSRTVRAVGEGHEDSPTSISDTTTCTLN---GATDFQELINFVYPDILTAAPASFADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSPLVKVPRITFEVKVGKQGMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
C++C A + EE CC G +V + PL YRT +FLD R +N LF+F+A+G + S +++ GR YHRV D S E N LY+ D E + L + + A L N IR RS+ H ++++ + F + +++ GPI+GDAP + EIA +I + E ++ V + G +P + S Y +LQYPL+ GWSP M + + + R LL F L +AQEY D + R E+ L FI N+ RI + + L V G GK LP+S+ SP R LDGMA+V+RKG+PS +TVTCN +W EI+ +L PG+ DRPDLC RVF KL+ ++ I +G LFG+ Y L VIEFQKRG+PHAHI + G Q E+D ++ +P ANG+LRE V++ MVH CG PNAPCM D CSK +P+ D T G YRR +T I++ I + +IVPYNP +L+ +CH +++ T V+ Y++KY KG D AR ++ +E+E Y ++RYIS+ EA+WRI +D+ R P VI L++HLE + V+ +TTE+ QR RT+ AA LW+ L D++ + + A R L DID MLR HG+ +GLP VE TE R + +D D A P+L EQ SV DA+ +V + F ID P G+GKT + I A LR++G +VLCTASTGIAAL GG+TAHS F++P H C V ++RAE + RL +R R D Y+ V VGE S SI L AT ++L+NFVYP + P R ILS TN++ EIN VL +LPN+ L S++S + P D + + + L V GVP H L LKVGC+V+ IRN++F G+VNG K V IS R V+ V R ++ +PRI F+ +V G+ R+QFPL+V Y MTINK+QGQTL +VGL
Sbjct: 225 CRFCSAPLFEEEKSRKMWCCHQGAHVVNEIPPLEAP---FYRTNYFLDKARSFNNLFAFSALGVSGGFQNPAGGGLSFVKIQGRIYHRVFDL--SWRGEK----NNMALYIEDPEERLRLARGLELREEITSEVLAYLTEVNRLIRDLRSL------HHHASESAQLVFQRTSRRVDGPILGDAP--AVNEIAGII-RTSAEYTPRQVVIW--KKG----AAKPHQVNYLSETYEALQYPLIFPHATCGWSPD------------MRDREGRKLTQVKYYRYLLLSNPRFTFLRRLAQEYFVDMWCRAEEERLQFIKYNQRNALRIASREELDETVAAEGGILPGKIYLPSSYTNSPRFMHLRYLDGMAIVSRKGKPSFFLTVTCNPSWQEIKSSLNPGEKHSDRPDLCVRVFHEKLRKLLIAIRSGILFGELIYILYVIEFQKRGLPHAHIAFRVAGGGPTQSAEIDSFVRATIPSREEANGRLRELVLQHMVHGPCGINYPNAPCMDRDNGK----CSKRFPRAEND-VTHADRRGFMLYRRPCE-ETVRIRRNR--------VITDSWIVPYNPAVLLMMECHCNLEVATGQRVIKYLFKYINKGPDRARVAIVEHPSRDEVENYANLRYISACEALWRILEYDISCREPTVINLHIHLEQQDNVIFQPGQEMEALQRSKSNLWLYLNRPDTPELTSLTYLEFFEQFIVETTEKRGNEPFADGRHFLKKRQRGKCVARLRWLSPTLGELFFLRMLLIKFPCRSYEDLRTVDGVIYATFQEAAMARGLLDEQSEFDHALQEASAFKTGRGLRQLFFAVIMFGAPAAILWEKFKDCLSEDYMGNEDNARIAHRRALCDIDHMLRPHGRCLRDMGLPEVEDVSTELGREVTRWDAEDAARSALEWRPKLTEEQLSVSDAIINAVTGEDENKVFFIDGPSGTGKTVVLNYITARLRSEGAVVLCTASTGIAALNHLGGITAHSMFQLPLETNDPHA-TCGVTGGSQRAELIRRASLIIWDEAPMAHKVTVEILDRCLRDICQNRQAFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLWPNIIKKRLRTILRSREDQDYTDFVLEVGENKVPS-ISIGIYRPIPLRMIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHT-DVLNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFVEKISRRFVEARVPGRPDTVL-IPRICFKFQVSNSGIEMIRRQFPLKVAYGMTINKAQGQTLDKVGL 1488
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: UPI001568188F (uncharacterized protein LOC117996074 n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568188F) HSP 1 Score: 420 bits (1080), Expect = 2.130e-121 Identity = 390/1352 (28.85%), Postives = 581/1352 (42.97%), Query Frame = 1
Query: 1 CQYCHAWKWHEESLN---CCSSGKYVAEPLIPLPPDVELLYRTRHFLDNQRRYNGLFSFTAMGAAPTPTWSQPSYP-SMLQLHGRAYHRVMDAFRSTYSENVPAVNKARLYMYDSEMLQHADKQKA-LNRSVVESLSASLYANNSWIRTYRSVLLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKETPPYTSRTMSTNSDKHVKIWTFCRQRLLCEKAFKILSVVAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSAV----------------GTASTGK-KLPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDITNGL-FGKATYFLSVIEFQKRGMPHAHIIVKYPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFN-PNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYV-----ETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMARARVLYDGN---EIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVVHDEDT-----------------------------------------------------------TEQQRRTLAATLWDA--HNGN------LMSDHLCH-----------------------------------MSQSSA-------------------------------------------LDRTLRD----IDLMLRKHGKTTESVGLPRVEHPDTEYHRLLAAFDRADMRAEADNLIPQLNSEQRSVFDAVTTSVESNS-----GGTFMIDAPGGSGKTFAMTAIAADLRAK-GKLVLCTASTGIAALLLPGGLTAHSTFKIPF-----------------------------------------------------------------GD------TLTHG------FPCNVKAET--ERAERFRLVQSMRDRLDLPYSRTVRAVGEGHEDSPTSISDTTTCTLNGAT------DFQELINFVYPDILTAAPASFADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSPLVKVPRITFEVKVGKQG-MSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
C C + EE CC G Y + L PL E Y FL+ R YN LF+F+A+G + + QP+ + L++ GR YHRV D YS++ N +Y++D + Q L+ V+ S++ ++ N +I ++ + E S +N I F Q ++ SHG I+GD P G+E+AA+I + + E + + + E + P + P + S QYPLL G+ GW P + K ++ + R LL E F + +++E+ D ++R D L +I + +T+ + AL SA G GK LP SF SP K + LD +A+V R G+PS IT+TCN W EI+Q++ GQ A P +C RVF +KL ++KDI +G FG Y + VIEFQKRG+PHAH+ + G ++DK++ ++P+ A G+LR+ V+ M+H CG N + PC +KK CSK +P+ R++ TT D+R +K+ + + + + +I++R++VPYN LL+KYDCH+ V++ TA AVV Y++KY KGAD +R V+ D N EIE Y + RY+ S EA WRI FD+ R PNV L VHLE +Q V T T++QR L A L+ + G L++ H C M+++ A +DR ID +LRKHG GLP V TE R ++R +R ++ +P+L+ EQ +F+ V V + S ID PGG+GKT + I A +R +VLCTAS+GIAA G TAHS F+ P GD + H F +VK+ ++ + F L+ S R R D +S + +G S T ++ T L + + +LI+FVYP+++ P R ILS N S EIN ++L+LLP S + ++ N + V+ L + G+P H L LKVGC+ M +RN+NF +VNG K IV SPR++ V + +PRI F+ + + R+QFPL+VCYAMTI+KSQGQT+ RVG+
Sbjct: 462 CSICQTRLFFEEKTRTKWCCGQGAYNVQNLEPL---TEEFYSHTSFLNRPRAYNNLFAFSALGVSHG--YQQPNTGITFLKIQGRVYHRVFDL---GYSDSA---NPIGMYVHDDNETRERQAQNLNLDMQVIRSITNFIHNVNPYIECFKRLNRETS------ENAHIIFEQTSRCSHGNILGDLP--LGREVAAII-RTEVEQFTPHCIAIWK-----EGHRSPHTVDILHPCFESFQYPLLYPYGNPGWYPN-----------KLDNKGSKLTQL-KYIRCLLLSESRFSEFNRLSEEWIIDMFNRISDERLRYISNMQTKN---SDSALRSAPLHEIEALNNDETIQGEGGIVPGKIYLPYSFTGSPRYMKLKYLDSIALVNRLGQPSYFITITCNPNWVEIKQSVPSGQKA--NPLICARVFNLKLAQLIKDIRSGKWFGNFIYLMYVIEFQKRGLPHAHVCFRVEGGGPVHNTDIDKFVRADIPNPSEAEGRLRKAVLDHMIHGPCGPPNRTDLPCWDDEKKK----CSKFFPK--RETDTTF----------CDDRGFVNLKRNSQNEAEITYRGRKIKINDRWVVPYNAALLLKYDCHLNVEVSTATAVVKYLFKYITKGADHSRVAVVLDENRNDEIENYVTKRYLGSCEATWRILEFDLVCREPNVKQLAVHLEGQQYVYFKPGTETEAANRTTSDLITYFNRPAGINFDELTYQDFYEKYIVHATRPRTKNVEILETTNNRFVTQRQRGELVARLFFVAPNRGEQFYLRLLLASHPCRSYRDLLNLGGPDCMTFQEAAKTIGLANDEAEYEKAMTEACAFFTGPRLRNFFVLLAVNGIPVASLWTKFRDQISEDFIHRQPDNIDRAYHSCLVAIDRLLRKHGTCLIEQGLPDVSDNTTELGREQTEYNRNTLRDFVNDWLPKLSPEQNEIFEFVNKLVTNQSFRGTQNSAIFIDGPGGTGKTLILNVITAHVRGNLNGIVLCTASSGIAAQNHENGTTAHSMFRFPLNLVDDLEYWNITNGSQRAELIFNANVIIFDEAPMAHKWLIHLLERSLRDLMKNDKIFGGKIIIFAGDYRQIPPVVVHARSNSDVFNASVKSSPIWQKLKTFSLITSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLINLSIISFVLELDDLIDFVYPNVVLNEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQI--FLGVDALNRMHPKGIPEHDLTLKVGCVCMIMRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYL-IPRIIFKAPIETGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGV 1752
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: UPI000CE1B892 (uncharacterized protein LOC111984391 n=2 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1B892) HSP 1 Score: 402 bits (1034), Expect = 5.720e-116 Identity = 404/1399 (28.88%), Postives = 603/1399 (43.10%), Query Frame = 1
Query: 1 CQYCHAWKWHEE----SLN--------CCSSGKYVAEPLIPLPPDV-ELLYRTRHFLDNQRRYNGLFSFTAMGAAPTPTWSQPSYPSMLQLHGRAYHRVMDAFRSTYSENVPAVNK----ARLYMYDSEMLQH--------ADKQKALNRSVVESLSASLYANNSWIRTYRSVLLEISRDH---SSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKE----TPPYTSRTMSTNSDKHVKIWTFCRQRLLCEKAFKILSV-VAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSAVGTAST-----GKK--LPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQ--NLVPGQCAMDRPDLCNRVFKIKLKAIMKDITNGL-FGKATYFLSVIEFQKRGMPHAHIIVK-YPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYVETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMARARVLYDG---------------NEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVVH--------------------------------------------------------------------------------------------------------------------DED-------------TTEQQRRTLAATL------------WDAHNGNLMSDHLC------------HMSQSSALDRTLRDIDLMLRKHGKTT---ESVGLPRVEHPDTEYHRLLAA---FDRADMRAEADNLIPQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAERFRLV--------------------QSMRDRLDLP-------------------YSRTVRAVGEGHEDSPTSISDTTTCTLN------------------GATDFQELI---------------NFVYPD-------------ILTAA----PASFAD------RGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNP----TDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSPL---VKVPRITFEVKVGKQGMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
C+YC+A W+EE S N CC G+ L PP++ ELL + H+ N RR+N +F+ T+MG ++ P + +L+G+ +HR+ +P V K A+LY++D++ H + + L+ ++V+ LS L NN ++T+R ++RD S NV + ++ S G + P+ E+AA+I D + R + RSG QR I P + ++QYPLL G+ G+ K+ P T ++ + + + Q+ E IL + Q++ DAY+ E+ L ++ +++ Q R Y + AV T GK+ LP+SF SP + D M++ G P L IT TCN WPEI+ +L+P Q DRPD+ RVFKIKL +++D+ +G FGK +E+QKRG+PHAHI++ YP ++DK I +PD ++ N + E + ++M+H CG NP +PCM K C KH+P+ F S T G A YRR DN T +KNG +DNR++VPYN LL+KY HI V+ + Y++KY KG+D A VLY+ +EI+ Y RYIS+SEA WR+F FD+Q R P V L H+E+EQ V D+D + +Q R L TL W A N L+SD + H+++ D L +I+ +L K G++ + + P V +RLL FDR ++ AE L+ +LN EQR ++DAV V NSGG + + GG+GKT+ + A LR++GK+VL AS+GIAALLLPGG TAHS F+IP +T C +K T AE V +S+RD L + + + + +GH + S + N + +F E I N V P I+TA +++AD R IL+PTN +EIN+ ++DLL + S++SI K++ DV + VEFL ++ PG+P H+L LKVG VM +RN+N G+ NG + +V +S +++ +VI GS + V +PRI K R+QFP+ VC+AMTINKSQGQ+L VGL
Sbjct: 172 CEYCNAILWYEERNRKSKNTKNPKFSICCREGRVKLPSLKSPPPELQELLQHSEHYKANIRRFNSMFAMTSMGGNVDVHANKGRGPYIFRLNGQNHHRI--------GSLLPVVGKDPSFAQLYIHDTKKEIHYRLSALPGQESEYDLDIAIVQILSKMLDENNVLVKTFR-----MARDRFKDSDMHNVRLRLIG-SRSSDG---REQNMPTCSEVAAIIVGDLSDENIHRDIIVEKRSG---LLQR---INELHPKFMAMQYPLLFPYGEDGFRNEILKKGLGGATPLTEEYVTMQ-----EYYAYQLQQRENEGETLILGRRLRQQFLVDAYTCVEEYRLIWVRNHQLQLRSEVYFGIKDAVFRGDTTPSSIGKRVVLPSSFTGSPRYMIQNYQDAMSICRWAGYPDLFITFTCNPKWPEIESYLSLIPAQRPEDRPDIIARVFKIKLDQLLRDLKHGKHFGKVIAVNYTVEWQKRGLPHAHILLYLYPDDKHPTPADIDKIISAEIPD-KVTNPRDYEVISQYMIHGPCGFANPKSPCMVDSK------CRKHFPKKFY-SDTVIDEDGYAIYRRRDNGMTV---EKNG------VMLDNRFVVPYNIDLLVKYQAHINVEWCNRSKSIKYLFKYVNKGSDRATF-VLYENLHTGATSEAQHITNIDEIKTYLDCRYISASEACWRLFEFDIQYREPAVQRLSFHIENEQNVTFKDSDYLDNVLERPDITKTMFTEWMKANEMYDTERNLTYCDFPTKWVWHRKQREWRPRKSGRCIGRIFHAHPASGDRFYLRMLLNVVKGARSFEEIRTIDHVVYPTYRAACYAHGLLDDDKEWDDAIKEASNWASGRQLRELFTTLLLFCEVTDPHALWMA-NWELLSDDILYRQKRLLMYDNLHLTEEQIQDHALFEIEQILVKSGRSLKEFDGIKYPNVSTIRENNNRLLQEELDFDRLELAAEHKKLLNELNVEQRKIYDAVIQDVACNSGGLYFVYGHGGTGKTYLWKTLIACLRSQGKIVLAVASSGIAALLLPGGRTAHSRFQIPI--IVTEESTCGIKQGTHAAELMTKVSLIIWDEAPMAHRNCFEAVDRSLRDLLRFTDINSADKTFGGKTVVLGGDFRQILPVIAKGHREDIVDASVNRSYLWNFCKVFVLTQNMRLQQPNADSNNFAEWILKLGNGELGEVDSQSNIVIPSDLLIDVGDDPIQSIVTATYPNLHSNYADGKYLEERSILAPTNDVVNEINDYIIDLLASNEETYLSADSICKASRYIQNEDV--LYPVEFLNSLKFPGIPNHRLRLKVGLPVMLLRNINQSVGLCNGTRLVVTQLSKWVIEAKVIT-GSHVGNKVFIPRIVLSPSDTKWPFVLKRRQFPISVCFAMTINKSQGQSLKHVGL 1518
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: UPI0019629509 (uncharacterized protein LOC120524463 n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019629509) HSP 1 Score: 385 bits (990), Expect = 4.670e-112 Identity = 364/1233 (29.52%), Postives = 542/1233 (43.96%), Query Frame = 1
Query: 1 CQYCHAWKWHEESLN-CCSSGKYVAEPLIPLPPDVELLY-----RTRHFLDNQRRYNGLFSFTAMGAAPTPTWSQPSYPSMLQLHGRAYHRVMDA--------------FRSTYSENVPAVNKARLYMYDSEMLQHADKQKALNRSVVESLSASLYANNSWIRTYRSVLLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKETPPYTSRTMSTNSDKHVKIWTFCRQRLLC-EKAFKILSVVAQ---EYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSAVGTASTGKK------LPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDITNG-LFGKATYFLSVIEFQKRGMPHAHIIVKYPGASAEQR---HEVDKWIWTNLPDERIANGKLREKVVKF-MVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEY----RRLDNRDTATIKQKNGDRKYVETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMAR-ARVLYDGNEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVVHDEDTTEQQRRTLAATLWDAHNGNLMSD-HLCHMSQSSALDRTLRDID----LMLRKH------GKTTESVGLPRVE-HPDTEYHRLLAAFDRADMRA------EADNLIPQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAERF-----------------------RLVQSMRD----------------RLDLP---------------------------------------------YSRTVRAVGEGHEDSPTSISDTTTCTLNGATDFQELINFV-------YPDILTAAPASFA---DRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVI---ARGSPLVKVPRITFEVKVGKQGMSFHRKQFPLRVCYAMTINKSQGQTLSRVG 3234
C +C A W ES CC++GK EPL P ++ L R++ FL R YN F T+ GA + ++ ++ G+ YH + F S+N+ A + +Y LN +V+ L L+ N++I ++++ L + ++ V I + Q H G P E+A LI D +KR + +S + QR I Y LQYPL+ G+ G Y + NS K V TF R R++ E L Q +Y D Y++ E L FI +N+ + R+ Y L A+ + + LP+SF P ++ D M V + GRP L IT T N WPEI L+ GQ A DR D+ +R+F +K+K ++ +T +FG T ++ IE+QKRG+PH HI++ EQ+ +++D I PD+ L ++K MVH CG NP +PCM DK C+K YP+ SF +++ TG+ Y RR + ++ K G +E DN ++VPY P L ++ HI V+ ++ + YI KY KG D A A V + +E+ Y+S RYISSSEA+WRI F + R P V L VHLE Q V Q ++W H +L D + L+ T DI L++ +H GKT + GLP H T + D+ E +NL L S+Q+ +D + SV + G F +D+PGG+GKTF + I A +R+ GK+ + AS+GIAA LL GG TAHS FK+P T CNVK T A+ R +Q +R+ R LP +S+ + A+G G I +T+ ++ D L+N V YP+++ S A +R +LSPTN S DEINN VL LP S +S++ T +EFL +++ PG+ P++L LKVG V+ +RN+N + NG + V A+ I++ ++ A+G V +PRI + F R QFP+++C+A+TINK+QGQT S G
Sbjct: 5 CSHCKAVTWKGESSGICCNNGKVKLEPLRHPPEPLKGLLMGTDSRSKMFLSCIRTYNNAFQITSFGAKSIVC--EGTFMPTFKIQGQVYHLIGSLLPEGNEHPQFLQLYFMGNDSDNIEATLRCNIY-------------PGLNLGIVQDLQKMLHVENNYINSFKTALDQHVHRENNDFRVIIRAENIPIQHHK---GRYNAPVNNEVAVLIVGQD---FTKRDIILHLKS---DQLQR---ISELHRSYDPLQYPLMFPYGEDG-----------YHINVLQCNSTKTVSAMTFYRYRIMVRENETNYLHYFRQIYNQYLVDMYAKIESERLSFIRNNQKKLRVDDYIHLKDAIHSDGNIEYVDQLVILPSSFTGCPRYMHEKTQDAMTYVRKFGRPDLFITFTTNPKWPEITDTLLQGQQAHDRHDIISRIFHLKVKRLINLLTKRKIFGTCTCYMYSIEWQKRGLPHVHILLWL-----EQKITPNQIDLIISAEFPDKH--QDPLLFSIIKSNMVHGPCGSLNPKSPCMKNDK------CTKRYPR----SFVSHTITGQDGYPTYKRRSPEEGGSVVEIKIGG---IEITDDNHWVVPYCPLLCKTFNVHINVEFCNSVKSIKYICKYVNKGTDQATFAIVNKENDELYQYQSGRYISSSEAVWRILSFPIHERYPPVTHLAVHLEKGQRVYFTTTNVLQH----PFSIWVKHRNSLTEDIYRREQRLFPDLNITYNDIMYNEVLIMLQHKLQSVSGKTLQDYGLPAPHLHTSTSFRTKYTTQTTYDIHRLLFYVQENENL---LVSDQKRAYDEILESVHKSHGKIFFLDSPGGTGKTFLINLILAKIRSDGKVAIAVASSGIAATLLEGGKTAHSAFKLPLNLTYNEAPVCNVKKGTLLAQVLQDCVIIIWDECTMSHKAAIEALNRTLQDIRNNENVMGGVTVLFSGDFRQTLPVIPRGTRADEVRALLKSSFLWSCIHTLTLTINMRVLLHCDTSADAFSKLLLAIGNGE------IKETSNGNIDIPNDLANLVNTVEELTERLYPNVINLQEKSDAWLCERALLSPTNNSADEINNYVLQKLPGDKKSYFSIDSVLDGKETVH---YPIEFLNSLNPPGMAPNKLFLKVGVPVILLRNLN-SLKLCNGTRLRVIALQSNIIEASILTGCAKGEK-VFIPRIPM-ISSNDYPFQFKRLQFPIKLCFALTINKAQGQTFSLAG 1160
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66) HSP 1 Score: 379 bits (974), Expect = 1.840e-109 Identity = 359/1245 (28.84%), Postives = 529/1245 (42.49%), Query Frame = 1
Query: 316 LYMYDSEMLQHADKQKA-LNRSVVESLSASLYANNSWIRTYRSVLLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKETPPYTSRTMSTNSDKHVKIWTFCRQRLLCEKAFKILSVVAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSAV----------------GTASTGK-KLPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDITNGL-FGKATYFLSVIEFQKRGMPHAHIIVKYPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFN-PNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYV-----ETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMARARVLYDGN---EIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVVHDEDT-----------------------------------------------------------TEQQRRTLAATLWD----------------------------------------------------------------------------AHNG-----------NLMSDHLCHMSQSSALDRTLRD----IDLMLRKHGKTTESVGLPRVEHPDTEYHRLLAAFDRADMRAEADNLIPQLNSEQRSVFDAVTTSV------ESNSGGTFMIDAPGGSGKTFAMTAIAADLRAK-GKLVLCTASTGIAALLLPGGLTAHSTFKIPFG--DTL-----THG----------------------------------------------------------------------FPCNVKAET--ERAERFRLVQSMRDRLDLPYSRTVRAVGEGHEDSPTSISDTTTCTL------NGATDFQELINFVYPDILTAAPASFADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSPLVKVPRITFEVKVGKQG-MSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
+Y++D + Q L+ V+ S++ ++ N +I ++ + E S +N I F Q ++ SHG I+GD P G+E+AA+I + + E + + + E + P + P Y S QYPLL G+ GW P + K ++ + R LL E F + +++E+ D ++R D L +I + +T+ + AL SA G GK LP SF SP K + LD +A+V R G+PS IT+TCN W EI+Q++ GQ A P +C RVF +KL ++KDI +G FG Y + VIEFQKRG+PHAHI + G ++DK++ ++P+ A G+LR+ V+ M+H CG N + PC +KK CSK +P+ TN+ D+R +K+ + + + + +I++R++VPYN LL+KYDCH+ V++ TA AVV Y++KY KGAD +R V+ D N EIE Y + RY+ S EA WRI FD+ R PN+ L VHLE +Q V T T +QR L A L+ A NG N +S+ H Q +DR ID +LR+HG GLP V TE R ++R ++ ++ +P+L+ EQ +F+ V V ES++ F ID PGG+GKT + I A +R +VLCTAS+GIAA G TAHS F+ P D L T+G F +VK+ ++ + F LV S R R D +S + +G S T ++ T L + + +LI+FVYP+++ P R ILS N S EIN ++L+LLP S + ++ N + V+ L + G+P H L LKVGC+ M IRN+NF +VNG K IV SPR++ V + +PRI F+ V + R+QFPL+VCYAMTI+KSQGQT+ RVG+
Sbjct: 1 MYVHDDNETRERQAQNLNLDMQVIRSITNFMHNVNPYIECFKRLNRETS------ENAHIIFEQTSRSSHGNILGDLP--LGREVAAII-RTEVEQFTPHCIAIWK-----EGHRSPHTVDILHPCYESFQYPLLYPYGNPGWYPN-----------KLDNKGSKLTQL-KYIRCLLLSESRFSEFNRLSEEWIIDMFNRISDERLRYISNMQTKN---SDSALRSAPLHEIEALNNDETIQGEGGVVPGKIYLPYSFTGSPRYMKLKYLDSIALVNRLGQPSYFITITCNPNWVEIKQSVPSGQKA--NPLICARVFNLKLAQLIKDIRSGKWFGNFVYLMHVIEFQKRGLPHAHICFRVEGGGPVHNTDIDKFVRADIPNPSEAEGRLRKAVLDHMIHGPCGPSNRTDLPCWNDEKKK----CSKFFPK-----CETNTTF-------CDDRGFINLKRNSKNEAEITYRGRKIKINDRWVVPYNAALLLKYDCHLNVEVSTATAVVKYLFKYITKGADHSRVAVVLDENRNDEIENYVTKRYLGSCEATWRILEFDLVCREPNIKQLAVHLEGQQYVYFKPGTETEAANRTTSDLITYFNRPAGLNFDNLTYQDFYEKYIIHATRPRTKNVEILETSNNRFVTRRQRGELVARLFFVAPNRGEQFYLRLLLASYPCRSYRDLLNLGGPDCMTFQEAAKTVGLANDEAEYEKAMTEACAFFTGPRLRNFFVLLAVNGIPVASLWSKFRNQISEDFIHR-QPDDIDRAYHSCLVIIDRLLRRHGTCLIEQGLPDVADETTELGREQTEYNRNVLKNFVNDWLPKLSPEQNEIFEYVNKLVTNQNFRESHNSAIF-IDGPGGTGKTLLLNVITAHVRGNLNGIVLCTASSGIAAQNHENGTTAHSMFRFPLNLVDDLGYWNITNGSQRAELILNANLIIFDEAPMAHKWLIHLLERSLRDLTKIDKIFGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQKLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVENLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYSIDEVVSDNADQI--FLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVRKPGLSDDYL-IPRIIFKAPVEPGSPIEMCRRQFPLQVCYAMTIHKSQGQTICRVGV 1193
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: A0A3L6E1U2_MAIZE (ATP-dependent DNA helicase n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6E1U2_MAIZE) HSP 1 Score: 386 bits (992), Expect = 3.430e-109 Identity = 355/1245 (28.51%), Postives = 551/1245 (44.26%), Query Frame = 1
Query: 1 CQYCHAWKWHEESLN-CCSSGKYVAEPLIPLPPDVELLYRT-----RHFLDNQRRYNGLFSFTAMGAA--PTPTWSQPSYPSMLQLHGRAYHRVMDAFRSTYSENVPAVNKARLYMYDSEML----------QHADKQKALNRSVVESLSASLYANNSWIRTYRSVLLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYK------ETPPY--TSRTMSTN-----SDKHVKIWT---FCRQRLLCEKAFKIL---SVVAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSA-----VGTASTGKK--LPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDITN-GLFGKATYFLSVIEFQKRGMPHAHIIV----KYPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQ-KNGDRKYVET--EIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMAR------ARVLYDGNEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVV-HDEDTTEQ-------QRRTLAATL----------------------WDAHNGNLMSDHLCHMSQSSALDRT------LRDIDLMLRKHGKTTESVGLPRVEHPDTEYHRLLAAFDRADMRAEADNLIPQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAERFR-------------------------------------------------------------LVQSMRDRLDLPYSRTVRAVGEGHE----DSPTSISDTTTCTLNGA-TDFQELINFVYPDILTAAPAS--FADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSPLVK---VPRITFEVKVGKQ-GMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
C YC A K+ E+ CC GK PL PP ++ L+ + RHF DN R +NG FSFT++ T + S + G YH + R +E+ LY YD + +H K K + R +V+ L + Y+ + +RT V D+ + + Q Q P E+AA ++ + E R + F + G + I ++ Y +L YPL G+ GW K E Y T R + N S H+ + +C + + F + + Q++A D Y + E S LD+I N+ + R Y+ L + + GK+ L TSF P + ++R +D MA+V + G+P + +T+TCN W EI++ L+PGQ DRP+L RVF KL+ + +T + GK ++ V+EFQKRG+PHAH ++ KY EQ D I +P + +LR+ V+K M+H CG NPN PC +K C HYP PF D+ L +D I + ++ DRK E+DNR++VPYNPYLL ++CHI V+ ++ V Y++KY YKG D A ++ D +EI+ YR R+++ EA+WRI+GF++ +P V+ L +HL + +V H+ E+ R L A W + G D + Q + ++T L DI ML+ GK ++ LP + + A+D A A +R+ +D + + V+++ GG F +D PGG+GKT+ + A LR +GK+ + TA++G+AA ++P G TAHS FKIP T+ G C+ ++ AE R LV +MR + D ++ + VG G + DS + D +G+ D LI+F +P++ S R ILS N D IN +++D + V S +S + D EFL + G+PPH L LK+GC V+ +RN++ G+ NG + +VR +D E++ G + K +PRI + F RKQFP+R+ +AMT+NK+QGQT+ VG+
Sbjct: 320 CSYCTAKKFEYETPGFCCRGGKVELAPL-ETPPQLKRLWDSADSDARHFRDNIRFFNGHFSFTSLYCCLDSMTTNVRDSGIYTFRAQGMMYHNIKSFGREGGAEH----KHLELYFYDDDPTLEHQYRKCREEHQQKDKEVIRQIVDILCGNPYSEH--LRTMGHV------DNLDDYRIALNLDQTLNQKTYNT------PLTSEVAA-VWIEGSEGRGQ-FSKSVMLHGKDSSSH---CIRSYHGCYDALSYPLFFPRGELGWHANILKVGVSMDEVDAYRATHRASNANDEDAESPSHLCVSVRDYYCYKFQIRPGVFNPILHGKRLFQQFAVDTYIKIESSRLDYIRRNQDRLRADLYQGLVDSMLDGDIRAEKVGKRTVLSTSFIGGPRDMRRRYMDAMALVRKFGKPDIFLTITCNPNWDEIRRELLPGQTPQDRPNLVVRVFHAKLQELKHRLTKQDILGKVRAYVYVVEFQKRGLPHAHFLLIMQRKYKLTCPEQ---YDLLISAEIPSNKYP--ELRKMVIKHMMHGPCGSLNPNCPCTK-----GRKSCKNHYPWPFSDTT-------------LQGKDLYPIYRCRDDDRKEKVRGCELDNRWVVPYNPYLLRLFNCHINVEACGSIKAVKYLFKYIYKGHDRASVVMRDASKADDDVDEIKQYRDARWVTPPEALWRIYGFELSQISPPVMQLQLHLPNMHMVAFHERQMVERVVNRPGADRLMLTAYFEANRLHEEARGILYRDFPEWYTWQSGKGKKHKDSMSEDYQHRSQNKTHVEQMVLIDIRNMLQSMGKDIKTFPLPPI----------IDAYDDAIGTAR-----------ERAAYDKIMSVVDTDQGGLFFVDGPGGTGKTYLYRVLLAMLRNQGKIAVATATSGVAASIMPRGRTAHSRFKIPL--TIDDGAVCSFTKQSGTAELLRKASLIIWDEASMTKRQVVEALDNSMRDIMGRPALPFGGSRAQVVASLLWMSYLWESMSHLKLVSNMRAKNDPWFAEFLLRVGGGTKETNIDSDIRLPDNVCVPYSGSDNDLDNLIDFAFPNLNENMSDSTYITSRAILSTWNDWVDMINVKMIDRFQGEHMVYHSFDSAMD----DPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVVRGFQRNSIDAEIVL-GQHVEKRIFLPRIPLCPSDEEMFPFQFKRKQFPVRLSFAMTVNKAQGQTIPNVGV 1489
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: A0A3L6FVV8_MAIZE (ATP-dependent DNA helicase n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6FVV8_MAIZE) HSP 1 Score: 383 bits (984), Expect = 6.080e-109 Identity = 333/1124 (29.63%), Postives = 515/1124 (45.82%), Query Frame = 1
Query: 1 CQYCHAWKWHEESLN-CCSSGKYVAEPLIPLPPDVELLYRT----RHFLDNQRRYNGLFSFTAMGAA--PTPTWSQPSYPSMLQLHGRAYHRVMDAFRSTYSENVPAVNKARLYMYDSEM-LQHADKQ-----KALNRSVVESLSASLYANNSWIRTYRSV-LLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKETPPYTSRTMSTNSDKHVKIWTFCRQRLLCEKAFKILSVVAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSA-----VGTASTGKK--LPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDIT-NGLFGKATYFLSVIEFQKRGMPHAHIIV----KYPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYVET-EIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMAR------ARVLYDGNEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVV-HDEDTTEQ---QRRTLAATLWDAHNGNLMSDHLCHMSQSSALDRTLRDIDLMLRKHGKTTESVGLPRV-EHPDTEYHRLLAAFDRADMRAEADN--LIPQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAERFRLVQSMRDRLDLPYSRTVRAVGEGHEDSPTSISDTTTCTLNGATDFQELINFVYPDILTAAPAS--FADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIAR--GSPLVKVPRITFEVKVGKQ-GMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
C YC A K+ E CC GK PL P L T RHF DN R +NG FSFT++ T + S + G YH + R +E+ LY YD + L+H ++ + ++ V++ L L N + RS+ +E D+ T N+ Q T + P E+AA+ + R +F + G + I ++ Y +L YPL G+ GW K P + + H K RL Q++A D Y + E S LDFI N+ + R Y+ L + + GK+ L SF P + ++R +D MA+V + G+P + +T+TCN W EI+ L+PGQ DR DL RVF KL+ + +T + + GK ++ V+EFQKRG+PHAH ++ KY EQ D I +PD++ +LR+ V+K M+H CG NP PC + C HYP+PF D+ T YRR D+ G ++ V E+DNR++VPYNPYLL ++CHI V+ ++ V Y++KY YKG D A ++ D +EI+ YR R+++ EA+WRI+GF++ +P V+ L +HL + +V H+ E+ + + A HN +++ ML+ GK ++ LP + + D ++ + A + L LN EQR +D + ++V+++ G F +D PGG+GKT+ + A LR++GK+ + TA++G+AA ++PGG TAHS FKIP T+ G ++ R + D + +PYS D LI+FV+P++ S R ILS N D IN +++D + V S +S + D EFL + G+PPH L LK+GC V+ +RN++ G+ NG + +VR +D E++ + +PRI + F RKQFP+R+ +AMT+NK+ GQT+ VG+
Sbjct: 389 CGYCTAKKFEYEPPGFCCRGGKVELAPLETHPQLRRLWDSTDSDARHFRDNIRFFNGHFSFTSLYCCLDSMTTNVRDSGIYTFRAQGMMYHNIKSFGREGGAEH----KHLELYFYDDDPNLEHRYRKCREECQQKDKDVIKQLIGIL-RENPYSEHLRSMGHVENLDDYRITLNLDQTLNQKTYNT----------PLTSEVAAVWIEGS--ERRGQFSKSVMLHGKDRSSHG---IRSYHGCYDALSYPLFFPRGELGWHTNIPKIRPGIFNPIL------HGK-------RLF------------QQFAVDTYVKIESSRLDFIRKNQDRLRADLYQGLVDSMFDGDIRAEKVGKRTVLSPSFIGGPRDMRRRYMDAMALVWKFGKPDIFLTMTCNPNWDEIRTELLPGQTPQDRSDLVVRVFHAKLQELKHRLTKHDILGKVRAYVYVVEFQKRGLPHAHFLLIMQRKYKLTCPEQ---YDLLISAEIPDKKYP--ELRKMVIKHMMHGPCGSLNPICPCTK-----GRASCKNHYPRPFCDT-TLQGKDSYPVYRRRDD----------GRKEKVRGFELDNRWVVPYNPYLLRLFNCHINVEACGSIKAVKYMFKYIYKGHDRASVVMRDASKADDDVDEIKQYRDARWVTPPEALWRIYGFELSQNSPPVMQLQLHLPNMHMVAFHERQMVERVVNRPDAIGAATTFCHNIGVLN---------------------MLQSMGKDIKTFLLPPIIDTYDDAIGTAREVYEEESIEAAVGDVALKDSLNEEQRVAYDKILSAVDTDQHGLFFVDGPGGTGKTYLYRVLLATLRSQGKIAVATATSGVAASIMPGGRTAHSRFKIPL--TIDDGGGGTEVTNSDGDIR------LPDEVCVPYS-------------------------GSDNDLDNLIDFVFPNLNENMSDSTYITSRAILSTRNDWVDMINAKMIDRFQGEHMVYHSFDSAMD----DPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVVRGFQRNSIDAEIVLGQYAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTVNKAPGQTIPNVGV 1388
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: A0A2N9IBN4_FAGSY (ATP-dependent DNA helicase n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IBN4_FAGSY) HSP 1 Score: 377 bits (969), Expect = 2.380e-107 Identity = 401/1369 (29.29%), Postives = 590/1369 (43.10%), Query Frame = 1
Query: 46 CCSSGKYVAEPLIPLPPDV-ELLYRTRHFLDNQRRYNGLFSFTAMGAAPTPTWSQPSYPSMLQLHGRAYHRVMDAFRSTYSENVPAVNK----ARLYMYDS-----EMLQHADKQKA---LNRSVVESLSASLYANNSWIRTYRSVLLEISRDH-SSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKE----TPPYTSRTMSTNSDKHVKIWTFCRQRLLCEKAFKILSVVAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSAV-----GTASTGKK--LPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQ--NLVPGQCAMDRPDLCNRVFKIKLKAIMKDITNGL-FGKATYFLSVIEFQKRGMPHAHIIVK-YPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYVETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMARARVLYDG---------------NEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQI-------------------------------------------------------------------------------------------------------VVHD------------------EDTTEQ--------QRRTLAATL------------WDAHNGNLMSDHLCH------------MSQSSALDRTLRDIDLMLRKHGKTT---ESVGLPRVEHPDTEYHRLLAA---FDRADMRAEADNLIPQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAERFRLV--------------------QSMRDRL--------DLPYS-RTVRAVGEGHEDSPT-------SISDTT-------------TCTLN--------GATDFQELI---------------NFVYP-DILTAAP---------ASFAD-------------RGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNP----TDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSPL---VKVPRITFEVKVGKQGMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
CC GK L P PP++ ELL + H+ N R++N +F+ T+MG +Q P + +L+G+ +HR+ +P V A+LY++D+ L +K+K+ L+ +VV+ L L NN+ ++T+R ++RD +D + ++ +S + P S E+AA+I D E R + RSG QR I P + ++QYPLL G+ G+ G K P T ++ ++ +QR + + + Q++ DAY+ E+ L +I +N+ Q R Y L AV +S GK+ LP+SF SP + D MA+ G P L IT TCN WPEI+ +L+PGQ DRPD+ RVFKIKL ++ D+ +G FGK +E+QKRG+PHAHI++ YP E+D I LPD+ G E V ++M+H CG NP +PCM +K C KH+P+ + T G YRR RD + +KNG +DNR++VPYN LL+KY HI V+ + Y++KY KG+D A VLY+ +EI+ Y RYIS+SEA WR+F FD+Q R P V L HLE EQI VVH +D +Q Q R L ATL W A N L+SD + + ++ + L +I+ +L K G++ + + P + +RLL FDR D+ A+ +L+ LN EQR ++D V V +NSGG + + GG+GKT+ + + LR++G++VL AS+GIAALLLPGG TAHS +IP +T C +K T AE V +S+RD L + P+ +TV G+ + P I D + T T N +F E I N V P D+L A A++ D R IL+PTN +EIN+ ++DLL + S++SI KS+ DV + VEFL ++ PG+P H+L L VG +M +RN+N G+ NG + +V +S +++ ++I GS + V +PRI K R+QFP+ VC+AMTINKSQGQ+L VGL
Sbjct: 7 CCHEGKVKLPYLKPPPPELQELLQHSVHYKANIRKFNSIFAMTSMGGNIDLRVNQGRGPYIFRLNGQNHHRI--------GSLLPVVGDKPRFAQLYIHDTANEIANRLSALNKEKSHCDLDPAVVQILLKMLDENNALVKTFR-----MARDRFKESDMHSVRLQLISSRSTDGREQNMPTCS--EVAAIIVGDISEENMHRDIIIENRSG---LLQR---INEVHPKFMAMQYPLLFPYGEDGFRNGILKRGLGGNAPLTEDFVTMQEYYAYRL----QQRQNEGQTLILARRLRQQFQVDAYTCVEEYRLIWIRNNQLQLRSEVYYGLKDAVFKGDTTPSSVGKRIVLPSSFTGSPRYMIQNYQDAMAICRWAGYPDLFITFTCNPKWPEIETFLSLIPGQRPEDRPDIIARVFKIKLDQLLHDLKHGKHFGKVIAVNYTVEWQKRGLPHAHILLYLYPDDKHPTPAEIDNIISAELPDKLTDPGDY-EAVKQYMIHGPCGAANPRSPCMVDNK------CMKHFPKKVYND-TVIDEDGYPIYRR---RDDGKMVEKNG------VLLDNRFVVPYNIDLLVKYQAHINVEWCNRSKSIKYLFKYVNKGSDRATF-VLYENVHTDTASESHHITNIDEIKTYLDCRYISASEACWRLFEFDIQYREPAVERLSFHLEDEQIITFKDSDYLDNVLQRPDITKTKFTEWMKTNEISNTARSLTYCDFPTKWVWHRKDKEWRPRKSGRCIGRIFHAHPTSGERFYLRMLLNVVKGARSFKEIRTVDGVVHPNYRTACYAHGLLDGDKEWDDAIKQASNWASGRQLRELFATLLMFCEVSDPHGLWVA-NWELLSDDILYRQKRILMYEHIQLTDEQLQNHALFEIEQILAKSGRSLKEFDGMRYPNMSAIRENRNRLLEEELDFDRVDLVAKHLSLLNGLNVEQRKIYDIVIEDVATNSGGLYFVYGHGGTGKTYLWKTLISCLRSQGQIVLAMASSGIAALLLPGGRTAHSRLQIPI--IVTEESTCGIKQGTHAAELMTKVSLIIWDEAPMAHRYCFEAVDRSLRDILRFTNTNSVNKPFGGKTVVLGGDFRQILPVVPKGQREDIVDASINRSYLWKFCKVFTLTQNMRLQQCNEDCKEFAEWILTLGNGEVDEVDNHSNVVIPSDLLIDAGDHPIHSIVIATYPDLHNKYIDGKYLEERSILAPTNDIVNEINDFMIDLLSPETETYFSADSICKSSSYIQNEDV--LYPVEFLNSLKFPGIPNHKLRLAVGLPIMLLRNLNQSNGLCNGTRLVVSQLSKWVIEAKIIT-GSHVGQKVFIPRIVLSPSETKWPFVLKRRQFPVCVCFAMTINKSQGQSLKHVGL 1326
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: A0A1D6QUZ2_MAIZE (ATP-dependent DNA helicase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6QUZ2_MAIZE) HSP 1 Score: 374 bits (961), Expect = 1.630e-106 Identity = 354/1289 (27.46%), Postives = 555/1289 (43.06%), Query Frame = 1
Query: 1 CQYCHAWKWHEESLN-CCSSGKYVAEPLIPLPPDVELLYRT-----RHFLDNQRRYNGLFSFTAMGAA--PTPTWSQPSYPSMLQLHGRAYHRVMDAFRSTYSENVPAVNKARLYMYDSEM-LQHADKQ-----KALNRSVVESLSASLYANNSWIRTYRSV-LLEISRDHSSTDNVGIEFAQVTKQSHGPIVGDAPPPSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYK------ETPPY--TSRTMSTN-----SDKHVKIWT---FCRQRLLCEKAFKILSV---VAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSA-----VGTASTGKK--LPTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVPGQCAMDRPDLCNRVFKIKLKAIMKDIT-NGLFGKATYFLSVIEFQKRGMPHAHIIV----KYPGASAEQRHEVDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYVETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMAR------ARVLYDGNEIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVV-HDEDTTEQ-----------------------QRRTL--------------------------------------AATLWDAHNGNLMSDHLCHMSQSSALDR-TLRDIDLMLRKHGKTTESVGLPRV-EHPDTEYHRLLAAFDRADMRAEADNLI--PQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAERFR--------------------------------------------------------------------------------LVQSMRDRLDLPYSRTVRAVGEGHE----DSPTSISDTTTCTLNGA-TDFQELINFVYPDILTAAPAS--FADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSIIKSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVI-----ARGSPLVKVPRITFEVKVGKQGMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
C YC A K+ E CC GK PL PP + L+ + RHF D+ R +NG FSFT++ T + S + G YH + R +E+ LY YD + L+H ++ + ++ V++ L + N + RS+ +E D+ T N+ Q T P E+AA+ + R +F + G + I ++ Y +L YPL G+ GW K E Y T R + N S H+ + +C + + F + + Q++A D Y + E S LDFI N+ + R Y+ L + + GK+ L SF + ++R +D MA+V + G+P + +T+TCN W EI+ L+PGQ DRPDL RVF KL+ + +T + + GK ++ V+EFQKRG+PHAH ++ KY EQ D I +PD++ +LR+ V+K M+H CG NPN PC + C HYP+PF + T YRR D+ +K R Y E+DNR++VPYNPYLL ++CHI V+ ++ V Y++KY YKG D A ++ D +EI+ YR R+++ EA+WRI+GF++ +P V+ L +HL + +V H+ E+ +RR L A LW H + D+ + +++ L DI ML+ GK ++ LP + + D ++ + + ++ LN EQ +D + + V +N GG F +D PGG+GKT+ + A LR++GK+ + TA++G+AA ++PGG TAHS FKIP T+ G C+ ++ AE R LV +MR + D ++ + VG G E D + D +G+ D LI+FV+P++ S R ILS N D IN +++D + V S +S + D EFL + G+PPH L LK+GC V+ +RN++ G+ NG + +VR +D E++ + L ++P + ++ F RKQFP+R+ +AMT+NK+QGQT+ VG+
Sbjct: 150 CGYCTAKKFEYEPPGFCCRGGKVELAPL-ETPPQLRRLWDSTDSDARHFRDSIRFFNGHFSFTSLYCCLDSMTTNVRDSGIYTFRAQGMMYHNIKSFGREGGAEH----KHLELYFYDDDPNLEHRYRKCREECQQKDKDVIKQL-VGILRGNPYSEHLRSMGHVENLDDYRITLNLDQTLNQKTYNM----------PLTSEVAAVWIEGS--ERRGQFSKSVMLHGKDRSSHG---IRSYHGCYDALSYPLFFPRGELGWHANIPKVGVSMGEVDAYRATHRASNANDEDAESPNHLCVSVRDYYCYKFQIRPGIFNPILYGKRLFQQFAVDTYIKIESSRLDFIRKNQDRLRADLYQGLVDSMLDGDIRVEKVGKRTVLSPSFIGGTRDMRRRYMDAMALVRKFGKPDIFLTMTCNPNWDEIRTELLPGQTPQDRPDLVVRVFHAKLQELKHRLTKHDILGKVRAYIYVVEFQKRGLPHAHFLLIMQRKYKLTCPEQ---YDLLISAEIPDKKYP--ELRKMVIKHMMHGPCGSLNPNCPCTK-----GRASCKNHYPRPFCGA-TLQGKDSYPIYRRRDDG------RKEKVRGY---ELDNRWVVPYNPYLLRLFNCHINVEACGSIKAVKYLFKYIYKGHDRASVVMRDASKADDDVDEIKQYRDARWVTPPEALWRIYGFELSQNSPPVMQLQLHLPNMHMVAFHERQMVERVVHRPGADRTVDGVMLPTFCEAAERRGLLESDNTLDDCLTERALFQMPSALRRLFATILVYCEPSDVAVLWRKHLDAMSEDYQRRSQSKTHVEQMVLIDIRNMLQSMGKDIQTFPLPPIIDAYDDAIGTAREVYEEESIELASTDMALKDSLNEEQWVAYDKIMSVVNTNQGGLFFVDGPGGTGKTYLYRVLLATLRSQGKIAVATATSGVAASIMPGGRTAHSRFKIPL--TIDDGVVCSFTKQSGTAELLRKSSLIIWDEASMTKRQAVEALDNSMRDIMGRPGLPFGGKTIVFGGDFRQVLPVIRKGSRAQVVASSLRMSYLWESMSHLKLVSNMRAKNDPWFAEYLLRVGGGTEVTNSDGDIRLPDEVCVPYSGSDNDLDNLIDFVFPNLNENMSDSTYITSRAILSTRNNWVDMINTKMIDRFQGEHMVYHSFDSAMD----DPHNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLVVRGFQRNSIDAEIVLGQYAGKRIFLPRIPLCPSDDEIFP--FQFKRKQFPIRLSFAMTVNKAQGQTIPNVGV 1389
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Match: UPI0010FC6558 (uncharacterized protein LOC112734513 n=2 Tax=Arachis TaxID=3817 RepID=UPI0010FC6558) HSP 1 Score: 370 bits (949), Expect = 4.680e-106 Identity = 327/1037 (31.53%), Postives = 483/1037 (46.58%), Query Frame = 1
Query: 550 PSGKEIAALIFKDDPESRSKRFVYTFPRSGPGETCQRPRFIPTWSPMYSSLQYPLLLFSGDAGWSPGFYKETPPYTSRTMSTNSDKHVKIWT------FCRQRLLCEKAFKILSV-VAQEYACDAYSRQEDSVLDFIGSNKTQRRITTYKALSSA-----VGTASTGKKL--PTSFHASPANRKKRQLDGMAVVTRKGRPSLMITVTCNGAWPEIQQNLVP-GQCAMDRPDLCNRVFKIKLKAIMKDITNG-LFGKATYFLSVIEFQKRGMPHAHIIVKYPGASAEQRHE-VDKWIWTNLPDERIANGKLREKVVKFMVHQKCGEFNPNAPCMTTDKKTNKKYCSKHYPQPFRDSFTTNSATGRAEYRRLDNRDTATIKQKNGDRKYVETEIDNRYIVPYNPYLLMKYDCHICVDLVTAMAVVAYIYKYCYKGADMARARVLYDGN---------EIEAYRSIRYISSSEAMWRIFGFDMQSRNPNVILLYVHLESEQIVVHDE-----DTTEQQ-------------------RRTLA-------------ATLWDAHNGNLMSDHLCH------MSQSSALDRTLRDIDLMLRKHGKTTESVG-LPRVEHPDTEY--HRLLAA---FDRADMRAEADNLIPQLNSEQRSVFDAVTTSVESNSGGTFMIDAPGGSGKTFAMTAIAADLRAKGKLVLCTASTGIAALLLPGGLTAHSTFKIPFGDTLTHGFPCNVKAETERAE---RFRLV-----------------QSMRD--------RLDLPYSRTVRAVG-EGHEDSPT----SISDTTTCTLNGA-------------------------TD--FQELINFVYPDILTAAPAS--FADRGILSPTNISTDEINNRVLDLLPNQIHVLSSSNSII--KSNPTDVGGVSSVEFLQAVDVPGVPPHQLNLKVGCIVMFIRNVNFDTGIVNGRKGIVRAISPRIVDVEVIARGSP--LVKVPRITFEVKVGKQGMSFHRKQFPLRVCYAMTINKSQGQTLSRVGL 3237
PS E+AALI D + + +S QR I + P Y +LQYPLL G+ G+ G TS ++S K KI T F Q+ + E + S + Q++ DAY+ E L F + Q R+ YK L + V A GK++ P++F P G PS IT+TCN W EI++ + G A DRPD+ R+FKIKL ++ D+ G +FGK ++ +EFQKRG+PHAHI++ Q + +DK I +PDE KL V +MVH CG +N N+PCM CSK YP+ FR + A +YRR DN I +K E +DN++IVPYNP LL+K+ CHI V+ + + Y++KY +KG D A + G+ EI Y RYIS+ EA+WR+FG+++Q + P VI L HLE EQ VV+ E D E+ R+L ++ W L H MS L DID +L +GKT + +P D R++ F+R D++ A +++ EQR FD + T+V + GG F + GG+GKTF ++A++R++ +VL AS+GIA+LLL G TAHS FKIP +T CN+K + +A + RL+ + + D R DLP+ V +G + + P S D T+N + +D F EL++F YP+IL + F R IL+PT + +E+NN ++ ++P + SS+SI + N + E L +++ G+PPH+L LKVG VM +RN++ +G+ NG + VR + +++ EV+ + + +PR+ + F R+QFP+ V +AMTINKSQGQTLS VGL
Sbjct: 187 PSASEVAALIIGDVEQLSKDMDIIIESQS---RKLQR---IDIFHPSYLALQYPLLFPYGEDGFRLGIA------TSDSISARPTKINKIITLRQFFAFRLQKRMGESPLILRSKRLFQQFLVDAYTMMESERLKFFRCKQPQLRVDKYKCLHESLVNGDVDAARLGKRIIFPSTFTGGPRY--------------AGYPSYFITMTCNPEWDEIKREVTSIGLKAKDRPDILCRLFKIKLDGLIDDLKEGKIFGKILGYVCTVEFQKRGLPHAHILLFMSNEFKPQTPDNIDKHITAEIPDEN-ERPKLHGAVQNYMVHGPCGPYNKNSPCMKNGS------CSKFYPKEFRQRTLIDEAEF-PKYRRTDN---GRIVKKR------ECVLDNKFIVPYNPELLLKFGCHINVEYTCQTSSIKYLFKYVHKGNDRVTATLYNAGDPSEATQAVDEIRNYYDCRYISACEAVWRLFGYEIQEKEPFVIRLPFHLEDEQPVVYGETSNVNDIVERAISHKSMFLGWMAVNMSYPYARSLTYAEFPTKFVWKDDSSKWFPRKKGFAIGRLTHVPAELTMSDDEIKQFCLMDIDKILHSYGKTLKDYPPMPLATEIDNSLLTERVIREELNFNRDDLKKNASDILAIATLEQRYAFDKIVTAVYCDEGGFFFVYGHGGTGKTFLWNLMSAEIRSRSDIVLNVASSGIASLLLSNGRTAHSRFKIPLN--ITEDSVCNIKPGSPQAMLLLKARLIIWDEALMVSRYCYEALDKCLGDIMRCSPTYRKDLPFGGKVVVLGGDFRQILPVIPRGSRQDIVHSTVNSSYLWKFCDNIDGESEICLPGDIVIPSSDHAFDELVHFSYPNILENISSKDFFKARTILAPTLDTIEEVNNHLMAIIPGVEKLYLSSDSICMDEGNMESQLDLYGPELLNSINCSGLPPHKLILKVGVPVMLLRNIDQSSGLCNGTRLQVRKLRNHVIECEVLTGKNVGHIALIPRMNMVPTNKTVPVRFQRRQFPIIVSFAMTINKSQGQTLSHVGL 1178 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.675.1 >prot_C-linearis_contig10.675.1 ID=prot_C-linearis_contig10.675.1|Name=mRNA_C-linearis_contig10.675.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1079bp CQYCHAWKWHEESLNCCSSGKYVAEPLIPLPPDVELLYRTRHFLDNQRRYback to top mRNA from alignment at C-linearis_contig10:3624390..3628463- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.675.1 ID=mRNA_C-linearis_contig10.675.1|Name=mRNA_C-linearis_contig10.675.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4074bp|location=Sequence derived from alignment at C-linearis_contig10:3624390..3628463- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:3624390..3628463- >mRNA_C-linearis_contig10.675.1 ID=mRNA_C-linearis_contig10.675.1|Name=mRNA_C-linearis_contig10.675.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6474bp|location=Sequence derived from alignment at C-linearis_contig10:3624390..3628463- (Chordaria linearis ClinC8C monoicous)back to top |