|
|
Homology
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: A0A6H5K0G0_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G0_9PHAE) HSP 1 Score: 229 bits (583), Expect = 3.120e-59 Identity = 120/262 (45.80%), Postives = 171/262 (65.27%), Query Frame = 1
Query: 694 EGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPN-SERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDD----PEAADLMLQVDS-PGNMCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGPFHQALKTGLRHEEVSKDQFPSGNQFFTHPF-EDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTETTAVFPSCE 1458
+G+V+V SVNCGYLD A+NFL + ++ DVKVL+VA D+ +FDF+D ++PGC +FP + SERH A+ AG +G EIFK +T++RP IL I+ QG+ VLWTD D+VWL +P+PLLPD + A++MLQ+D P N CTCF+++ T + LL W + V++ +Q+QMAF+ P Q + GL E + + P G + F F E+NY Y N+++VHNNWI GH K+ RF + LW+V FPSC+
Sbjct: 1216 QGMVVVTSVNCGYLDMAVNFLLSVRRAGGDVKVLFVAMDEASFDFLDDLSPGCVVLFPQEDGSERHRAVKAGQWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTQKNSTAAKCAEVMLQIDGKPINKCTCFMYLDCTPNAATLLELWKREIVETEVSQNQMAFRAPLAQMEQAGLNLEILPDEVMPPGFKAFDDAFLEENYDR-YRDNLLMVHNNWIIGHDPKRDRFRKSGLWDVEGWE--FPSCQ 1474
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: D8LU02_ECTSI (Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU02_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.490e-56 Identity = 124/322 (38.51%), Postives = 173/322 (53.73%), Query Frame = 1
Query: 616 RSEDG------VVSIGPAPWPPEYVLEYVAT---------------------------------EEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPD--VDDPEAADLMLQVDSPGNMCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGPFHQALKTGLRHEEVSKDQFPSGNQFFTHPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTETTAVFPSCE 1458
R+E+G V +I A WPPEY+L+ V ++G+VIV+SVNCGYLD A NFLQ+ + DVKVL+VA D+VAFDF+D ++PGC FP SER HAI AG +G IFK QT+ RP IL I+ QG+ L+TD D+ WL + + LLP+ V +++LQ D+ CTCF+++ T + LL W + + + QDQ AFQ P Q + GL + + K+ GN+ F + N + ++IVHNNWI GH K+ RF LW V + FP+C+
Sbjct: 212 RAENGPGANASVATIMRALWPPEYILDTVIQPLFTKDEEEERAASSMVGLFDRGSWGASQRERKQQGVVIVSSVNCGYLDMASNFLQSVGQAAGDVKVLFVARDEVAFDFLDALSPGCTVFFPEVGSERAHAIQAGQWGDNIFKQQTVARPDILLPILRQGYKALYTDVDIFWLGNVLSLLPNSRVTQTPPVEVILQADA-KQKCTCFMYLDSTPNAIRLLELWKQEIAEKSSFQDQRAFQSPLAQMQEAGLALQLLPKEAMLPGNRGFDETYVKNNYALLQDKLLIVHNNWIVGHDPKRERFRMAGLWEVDDWE--FPTCQ 530
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: UPI001C52F6CD (UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like isoform X1 n=3 Tax=Proteaceae TaxID=4328 RepID=UPI001C52F6CD) HSP 1 Score: 100 bits (250), Expect = 2.760e-19 Identity = 89/275 (32.36%), Postives = 128/275 (46.55%), Query Frame = 1
Query: 691 EEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFP-SPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVD---------SPGN-----MCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGP-FHQAL-KTGLRHEEVSKDQ--FPSGNQFF---THPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTETTAVFP 1449
+ G VIV +V+ YL F N+L + + KVL +A D ++ PG A + P +P+++ H G+ GF T RP L I+ G+ V++ D DMVWL P P L D D M V SPG +C+C +FM PTS + +L WI+ D ++ + + P F+ AL KT + + Q FPSG +F T E H VIVHNN+ITG K +RF ++ LW V + + P
Sbjct: 88 KNGTVIVCAVSQPYLPFLNNWLISISRQKHQEKVLVIAEDYATLYKVNQKWPGHAVLIPPAPDAQTAHKFGSQGF-----FNFTSRRPRHLLQILELGYNVMYNDVDMVWLADPFPYLAGHHDVYFTDDMAAVKPLNHSYELPSPGKKGRTYICSCMIFMHPTSGAKQVLRKWIEELQDQPWSKTKKSNDQPAFNWALNKTAGQVDLYLLPQVAFPSGGLYFKNQTWVQETKGLH------VIVHNNYITGFVKKIKRFHDFGLWLVDDHSLESP 351
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: A0A0D3B937_BRAOL (Glycosyltransferase n=5 Tax=Brassiceae TaxID=981071 RepID=A0A0D3B937_BRAOL) HSP 1 Score: 99.4 bits (246), Expect = 9.730e-19 Identity = 84/268 (31.34%), Postives = 125/268 (46.64%), Query Frame = 1
Query: 685 ATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSP-NSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVDS---------PGN-----MCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGP-FHQAL-KTGLRHEEVSKDQ--FPSGNQFFTHPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTE 1431
A + G VIV +V+ YL F N+L + + KVL +A D ++ PG A + P +S+ H G+ GF T RP L IV G++V++ D DMVWL+ P L D D M + PG +C+C +F++PTS +LL+ WI+ D ++ + A P F+ AL KT + + Q FP+G +F + T VI+HNN+I G K +RF +Y LW V +
Sbjct: 90 AAKNGTVIVCAVSYAYLPFLNNWLISVSRQKHQDKVLVIAEDYATLYKVNERWPGHAVLIPPAFDSQTAHKFGSQGF-----FNFTARRPQHLLQIVELGYSVMYNDVDMVWLQDPFKYLEGRHDAYFMDDMTAIKPLDHSHDLPPPGKKGRPYICSCMIFLRPTSGAKLLMRKWIEELQDQPWSKAKKANDQPGFNWALLKTAHQVDLYLLPQAAFPTGGLYFKNKTWVKDTK---GKHVIIHNNYIVGFEKKIKRFRDYGLWLVDD 349
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: A0A022RGM6_ERYGU (Glycosyltransferase n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RGM6_ERYGU) HSP 1 Score: 99.0 bits (245), Expect = 1.310e-18 Identity = 84/268 (31.34%), Postives = 125/268 (46.64%), Query Frame = 1
Query: 679 YVATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLML---------QVDSPGN-----MCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGP-FHQALKTGLRHEEV---SKDQFPSGNQFF---THPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLW 1419
YVA +IV +V+ YL F N+L + + + KVL +A D ++ PG A + P P E A A FG + F T RP L I+ G+ V++ D DMVWL P P L D D M ++ PG +C+CF++++PTS +LL+ WI+ D ++ + A P F+ AL +V + FP+G +F T E H V++HNN+I G K +RF++Y LW
Sbjct: 90 YVA-RNNTLIVCAVSEAYLPFLNNWLISISRQKQQEKVLVIAEDYATLYKVNERWPGHAVLVP-PALE---AAAAHKFGSQGFFNFTARRPRHLLQILELGYNVMYNDVDMVWLSDPFPYLKGEHDVYFMDDMAFVKPLDHSHELPPPGKKGRTYICSCFIYLRPTSGAKLLMKKWIEELQDQPWSRAKKANDQPGFNWALNKTAGQVDVYLLPQKAFPTGGLYFKNKTWVQETKGMH------VVIHNNYIIGFEKKTKRFKDYGLW 346
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: UPI001E1E1264 (UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1264) HSP 1 Score: 91.3 bits (225), Expect = 5.220e-17 Identity = 64/240 (26.67%), Postives = 120/240 (50.00%), Query Frame = 1
Query: 703 VIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVDSPGNMCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGPFHQALK-TGLRHEEVSKDQFPSGNQFFTHPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLW 1419
+I+ +VN GY DF N+ +K+ + +++ VA D+ + + + S + A+ +G + F + RP + + G +++ D D VWLK+P P + ++ +Q D P +CT + +K ++ L+ W +++++ DQ AF ++ +K + +R + + FPSG +F F+D+ +VIVHNN+I GH+AK +RF +Y+LW
Sbjct: 4 IILVTVNNGYFDFFQNWYHYYRKLHLNYQLIVVAEDEEVLAKLKQINENLMTIIRSLRNSSSDAVV---YGSQEFSELSSGRPTHILKRIQHGLNIVYADLDAVWLKNPFPYFNG-----SFEMWMQSDGPRTLCTGLMAIKSSNETIKLMQAW-QASLEKNVQIDQRAF----NEVIKYSEVRLKTLDMTLFPSGQLYFRE-FKDDQRR----KVVIVHNNYIRGHSAKLQRFIKYKLW 225
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: A0A0G4GFG5_VITBC (Nucleotid_trans domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GFG5_VITBC) HSP 1 Score: 92.4 bits (228), Expect = 1.290e-16 Identity = 77/277 (27.80%), Postives = 129/277 (46.57%), Query Frame = 1
Query: 619 SEDGVVSIGPAPWPPEYVLEYVATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVK-VLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVDSPG--NMCTCFLFMKPTSSVELLLADWIKSTVDSGANQDQMAFQGPFHQALKTGLRHEEVS---KDQFPSGNQFF----THPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLW 1419
+ D V S + + +L +A G++I+ +VNCG +DFA+N+ ++ Q+ + +K L + DD + + + P A P E+ + A + + F + RP I+ +GF+VL+ D DMVW K+ + L + ++LQ+D+P + C CF + +L+ +W + + Q ++A+K R+ V + FPSG FF HP E T +V VH NWI G KK + E+Y LW
Sbjct: 47 AHDEVPSDASSDFLSRALLSSIADSRGLIILTTVNCGMVDFAVNWARSIQR--QGIKSFLIICYDDKCMEILTQVFPHNVARAPP---EKQISSAATKWLDKNFISLCKERPYFFREILLRGFSVLFNDVDMVWRKNVVNHLGN-----GKRIVLQLDNPHAHHFCGCFQYFPVAPESFMLIQEWERQMQREEMQRKDYGDQEGLNRAVKEMQRNFTVHVLPQKLFPSGRGFFGVARPHPSE-RLTPEERQQVVAVHANWIIGRERKKAQLEKYGLW 312
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: A0A8J1Y7P3_OWEFU (Ofus.G18972 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y7P3_OWEFU) HSP 1 Score: 81.3 bits (199), Expect = 3.340e-12 Identity = 66/258 (25.58%), Postives = 115/258 (44.57%), Query Frame = 1
Query: 673 LEYVATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVDSPGNMCTCFLFMKPTS-SVELLLADWIKSTVDSGANQDQMAFQGPFHQALKTGLRHEEVSKDQFPSGNQFFTHPFE----DNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTE 1431
+E VA I IV+ + G+LD INF + + + + L + D+ D D + F + + FK + ++ I+ I+N G++VL TD+DMV+ +P+ L + D+ +Q D+ + F+++ PT+ S+ L W S Q + + + ++ + FP G ++F H DN PNIV++HNNW+ G+ AK R +E+ LW V +
Sbjct: 171 IENVAVNNSI-IVSVADKGFLDTTINFYRTSIEPYGIINYLVICIDE---DTEDALNSESVQTFFLGQDIAGKDSAESKYDSDDFKRKAKMKTKIVLGILNMGYSVLVTDTDMVYFHNPLEYLGQ----DEFDMEIQDDAEAGYNSGFMYVHPTTNSIALFEKAWKMSERIPSVGQQDVLNMALEQAEMGSRIKVRVLPPQLFPCGKEYFIHGQRMFSGDNED----PNIVVMHNNWLVGNAAKIYRLKEHCLWTVDD 416
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: UPI0018D6593A (UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6593A) HSP 1 Score: 73.2 bits (178), Expect = 3.670e-10 Identity = 67/276 (24.28%), Postives = 113/276 (40.94%), Query Frame = 1
Query: 673 LEYVATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGF--GGEIFKTQTLI-------RPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVDSP-------GNMCTCFLFMKPTSSVELLLADWIKST-----VDSGANQDQMAFQGPFHQALKTGLRHEEVSKDQFPSGNQFFTHPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTETT 1437
L + G+V++ N G+LD +N L + ++V V +A D+ + ++ A G A+ H A+ G GE+ + R G ++ QGF VL+TDSD W + P P D M+ +SP C+ F++MKPT L + +WI+S +D + P H +K + FP G F+ N ++ + V++H I GH K ++F+ +W V ++
Sbjct: 69 LNDILQRPGVVMLTITNLGFLDMTMNMLASVRRVGICVNTTIIAEDEKVYKYLHKKAKGDPAV--------HVAMTNSGLMQPGEVKRKNARTYFDLLKKRQGYFLSLLEQGFEVLFTDSDTFWFRDPFPYFQGDFDMS----MMDTNSPYPTRTSRAQHCSGFIYMKPTDVTLLFVKEWIRSLKGKHIMDQIVMNKLLQADQPVHVNIKP------LDIKLFPPGPTFYEF-LAKNASY----SAVVMHAATIHGHDEKVQKFKSSNMWLVNASS 321
BLAST of mRNA_C-linearis_contig10.674.1 vs. uniprot
Match: A0A8B7ZV89_ACAPL (UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZV89_ACAPL) HSP 1 Score: 70.5 bits (171), Expect = 2.660e-9 Identity = 57/261 (21.84%), Postives = 117/261 (44.83%), Query Frame = 1
Query: 682 VATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFMDTMAPGCAAMFPSPNSERHHAIGAGGF----GGEIFKTQTLIRPGILSHIVNQGFAVLWTDSDMVWLKSPMPLLP---DVDDPEAADLMLQVDSPGNMCTCFLFMKPTSSVELLLADWIKSTVDSG-ANQDQMAFQGPFHQALKTGLRHEEVSKDQFPSGNQFFTHPFED-NYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTETT 1437
+++ G++++ S N +LD +N L++ ++ V +A D+ ++++ A G ++ S + I + + ++ + IL+++ QG+ +L+TD+D W + P P D+ ++A+ + N C F++ KPTS+ + WI+S G DQ G + + + + + FP G +F+ + NY+ V++H I GH AK F+ +W + T+
Sbjct: 75 ISSRPGVMLLTSTNLAFLDMTMNMLESIKRTRVCVNTTIIAEDEKVYEYLWKRAEGDPGVWVVKTSSGY--INSKEILRRNPKQYYEMMNKRQAYILTYL-EQGWEILFTDTDTFWFRDPFPFFEGNFDISLIDSANPFGVRNRQSNFCAGFVYFKPTSATLQFVQTWIQSMKTYGWMRSDQTVMNGLLYWDKPVHIDIKPLDTNIFPWGPKFYNLLAKKANYS------TVVMHAASIRGHAAKVASFKSSNMWLINATS 326
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 220.3 |
| Seed ortholog evalue | 1.4e-54 |
| Seed eggNOG ortholog | 2880.D8LU02 |
| KEGG ko | ko:K11714,ko:K20784 |
| KEGG Pathway | ko00514,map00514 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000271,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005975,GO:0005976,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009664,GO:0009832,GO:0009856,GO:0009987,GO:0010306,GO:0010383,GO:0010393,GO:0010396,GO:0012505,GO:0016043,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0017144,GO:0019538,GO:0022414,GO:0032501,GO:0032502,GO:0033692,GO:0034637,GO:0034645,GO:0035250,GO:0035252,GO:0036211,GO:0042285,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0045229,GO:0045488,GO:0045489,GO:0048856,GO:0048868,GO:0051704,GO:0052325,GO:0052546,GO:0070085,GO:0070589,GO:0070592,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 |
| EggNOG free text desc. | rhamnogalacturonan II biosynthetic process |
| EggNOG OGs | 28KPY@1,2QT5X@2759 |
| COG Functional cat. | M |
| CAZy | GT77 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01003 |
| Exons | 5 |
| Model size | 2278 |
| Cds size | 1083 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927352.3285484-UTR-C-linearis_contig10:3609242..3609623 | 1622927352.3285484-UTR-C-linearis_contig10:3609242..3609623 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 3609243..3609623 + |
| 1690879646.4476347-UTR-C-linearis_contig10:3609242..3609623 | 1690879646.4476347-UTR-C-linearis_contig10:3609242..3609623 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 3609243..3609623 + |
| 1622927352.3965049-UTR-C-linearis_contig10:3621542..3622356 | 1622927352.3965049-UTR-C-linearis_contig10:3621542..3622356 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 3621543..3622356 + |
| 1690879646.5090144-UTR-C-linearis_contig10:3621542..3622356 | 1690879646.5090144-UTR-C-linearis_contig10:3621542..3622356 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 3621543..3622356 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927352.3400266-CDS-C-linearis_contig10:3609623..3610031 | 1622927352.3400266-CDS-C-linearis_contig10:3609623..3610031 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3609624..3610031 + |
| 1690879646.458163-CDS-C-linearis_contig10:3609623..3610031 | 1690879646.458163-CDS-C-linearis_contig10:3609623..3610031 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3609624..3610031 + |
| 1622927352.3515267-CDS-C-linearis_contig10:3610432..3610522 | 1622927352.3515267-CDS-C-linearis_contig10:3610432..3610522 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3610433..3610522 + |
| 1690879646.4661357-CDS-C-linearis_contig10:3610432..3610522 | 1690879646.4661357-CDS-C-linearis_contig10:3610432..3610522 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3610433..3610522 + |
| 1622927352.3604393-CDS-C-linearis_contig10:3611147..3611333 | 1622927352.3604393-CDS-C-linearis_contig10:3611147..3611333 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3611148..3611333 + |
| 1690879646.47464-CDS-C-linearis_contig10:3611147..3611333 | 1690879646.47464-CDS-C-linearis_contig10:3611147..3611333 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3611148..3611333 + |
| 1622927352.3730447-CDS-C-linearis_contig10:3612062..3612200 | 1622927352.3730447-CDS-C-linearis_contig10:3612062..3612200 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3612063..3612200 + |
| 1690879646.4843767-CDS-C-linearis_contig10:3612062..3612200 | 1690879646.4843767-CDS-C-linearis_contig10:3612062..3612200 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3612063..3612200 + |
| 1622927352.38463-CDS-C-linearis_contig10:3621281..3621542 | 1622927352.38463-CDS-C-linearis_contig10:3621281..3621542 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3621282..3621542 + |
| 1690879646.4977465-CDS-C-linearis_contig10:3621281..3621542 | 1690879646.4977465-CDS-C-linearis_contig10:3621281..3621542 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 3621282..3621542 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.674.1 >prot_C-linearis_contig10.674.1 ID=prot_C-linearis_contig10.674.1|Name=mRNA_C-linearis_contig10.674.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=361bp
MALTGLDVRNKTVNKSTLSDFLPTLVNGANQRTGALVLVDGTQMVSSMFD
TRGINGVSNATVADGENIRIGTLELALLRSEDGVVSIGPAPWPPEYVLEY
VATEEGIVIVNSVNCGYLDFAINFLQAAQKVIRDVKVLWVATDDVAFDFM
DTMAPGCAAMFPSPNSERHHAIGAGGFGGEIFKTQTLIRPGILSHIVNQG
FAVLWTDSDMVWLKSPMPLLPDVDDPEAADLMLQVDSPGNMCTCFLFMKP
TSSVELLLADWIKSTVDSGANQDQMAFQGPFHQALKTGLRHEEVSKDQFP
SGNQFFTHPFEDNYTHIYFPNIVIVHNNWITGHTAKKRRFEEYQLWNVTE
TTAVFPSCES* back to topmRNA from alignment at C-linearis_contig10:3609243..3622356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.674.1 ID=mRNA_C-linearis_contig10.674.1|Name=mRNA_C-linearis_contig10.674.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=13114bp|location=Sequence derived from alignment at C-linearis_contig10:3609243..3622356+ (Chordaria linearis ClinC8C monoicous)
TTTAGTGACTGTCTACATAGAAAAGTCGGACGAATAGCTGACGCTCGATG
CTTGTAGCCCATTGCCGCGCCCGACGTACTGCGAGAGAGTCAGTCGCAAG
ATGATAACGCTGCATGTACATACATATAGATCGCTAAACCTCTCGAATGT
TTGTCGGTTTTTGCACAGCAACCAAATGCAACTGTGTTCGGGATCCTGGG
TGAGGGTACTTTGCCGCCGGTCTATTTTGCCCAGTCGATCAAGTTTGTGG
AGCAAGCACTTGCAGGGCATTCATCACCGACGGCAGTGATAACGCGGTCT
CAGGTCAAACGTCAGCATGCTGACAGCAATGCTCCGCAGTGGTTGCCGGA
CACCTTCATCGCCCAGGTCTGGTGCAATGAAATGGCACTAACCGGACTTG
ACGTTCGCAACAAAACGGTGAACAAGTCAACTCTGAGTGACTTCTTGCCG
ACGCTAGTCAACGGTGCCAACCAGCGTACGGGGGCGCTTGTGCTGGTCGA
CGGTACTCAGATGGTGTCATCCATGTTCGACACTAGAGGAATCAACGGCG
TCAGCAATGCAACGGTGGCCGATGGAGAGAATATCAGAATCGGAACACTG
GAGCTTGCTCTTCTTCGCAGCGAGGATGGCGTTGTTTCCATCGGCCCAGC
GCCGTGGCCCCCGGAGTATGTGCTGGAGTACGTGGCTACTGAAGAAGGAA
TCGTTATTGTGAACAGTGTCAACTGCGGGTATCTGGACTTCGCGATAAAC
TTCTTGCAAGCTGCGCAAAAAGTCATTCGTGACGTTAAGGTAGGTCCACG
ACCGACCGCTCATCATATGCATAATATAATACATGCATAGGATCTTTCAG
TATAGGGTTTCTTCTTTCCAGCCATTTTGTATACTACTAGCTGTGCTTTT
TGTTTTGGCTTCACGGTGTGCCGAGATTTTCGGCGGAACGAGACTAAATG
CTGATCGTACCTCTCTCTGTCTTCCTGCTTGCTTGCAACTTTCCTTTTCC
TGCCGCCAAACGCGGTCTACACAGACAGCAGCACCATTATCATCGGCAAG
AGTCATAAACTGCAAAGTACTGTTAGTTGTAGTAGTAGCGTTCTGGCATA
CATACTACTGGTAATTTTCCTTTCCTGTCCTCTACCTTTCACCTCATCAT
GCAGCTTTGACCGCCCGTCTTTCGGGCAACAAACAAGCAGGTTTTATGGG
TGGCCACGGACGACGTTGCGTTCGACTTCATGGACACCATGGCCCCTGGA
TGCGCTGCTATGTTTCCATCGCCGAACTCGGTGGGGTTTATTCGAGCGTT
TTCCCTCGTCAACTGTACACTGCCTTCCGTATTCATTTCTACAAGACATC
ATCGCTAGACCTTTCGAGGCAAAACGTAAGGATTCGTTTGCCATAACAAC
ACCAACAACCCCTCGCAGCTATAAAACGAAGACGGAGTGCAACATGGTTA
GAAGCGTGCCTTGGAAATAATATCCTCTAATTGTTGTCTCCGCTGAGCAT
GGACTACTACTACTGCTACTACTGTAGTCCAGAAAATATTACTCCAGAAA
TAACAAGGGCTGTTCTGCCCTTGGTTGCAGTATGTAATAGTAGGCTATTC
GATTGGACGTTTTCGTGCTAGCCTTAGTCCATCTAGTAGGCCTGAAAGGA
GATGGCGAGCGCAAAACAAAATGAAGGAGTCATGGACGTTGAGTTGGATT
TGATTGCGTCTGCCTTCAATTATGGGAAACGAAATAACAATAATAATTCA
ATGTACCCTGCTTGTTGTGAAGGCGAACTTGTTCAGTTCTTCCAGCGAAC
AGACAAGAATGCTCTGAAAACATAAGAAGCATCATAATATACTTGATGGC
GTGACTCGAAGTGTGACGCACCTACTATTACTTACTATGCTTTCGTCGGG
AACAGGAGCGTCACCACGCAATTGGGGCTGGCGGTTTTGGCGGCGAGATC
TTCAAGACGCAAACGCTCATCCGACCGGGTATTCTGTCGCACATTGTGAA
TCAAGGGTTCGCCGTGCTTTGGACCGACTCCGACATGGTGTGGCTGAAGT
CTCCCATGCCGCTACTACCAGATGTTGATGACCCGGAAGCGGTGAGTGCC
CTCATATGGCACCGCTTTTCGAGATGACACTTCTCCACATGGAAATACCA
GTTGATTGTGCGTATCGTTTACCCCGCCCCACCGGTGGTCGGTGGGGTCA
GAAGGCCATTGACGTCGAGAACGGTTGGTTGCGGCCGATTAGAGGCTTGG
TGCGACCCCGTAAGTTCGTCAAACCAGATCGGGTGTCAATCGCTTCGGCA
AGAAGAGGAGCTTTGAAATGGCCACAAATATCATGAATGACGTACTGCAG
TAAGTAGTTATGGCATGGAATGAAATAATAGCAATACCAAAACGAACCTT
CGAGGAACTACTTGCACCGAAAATAGAACTGGTAGGTACAATGCGCGGGT
AGTCGTTGGTCGGAATTTGACCACTCAAAGGCGAACAAATAACGCAACAA
TCTCGTTCTAGTGAACCAACCCTGCCGAAACGACAAATAAATGACAACGG
CTGGGCAAGAAGCGACCCTGCGGAGATATGCCAGAACCCGCAGTAGTCAC
GGCCTGCCCCTCACGAGCACAACAAGGCACCAGCGGGGTGCTGGTGTGAA
AACTTTTTCTCTCTCTGTGTTTGGCAGGTAGGTGTGTTCGTCTGTCTGTG
CAAAGAAAGGGTGAAGGTGTATGTTCAGTCGACAGCACGTGCTGTAGATC
CTGTGTTTGCAAAAACAGAATGGAGCCTTGTTTGTCTCAGCGTTCTTCGT
TCCCGTGTGTCTTGCAACAGGCGGATCTCATGCTTCAAGTCGACTCTCCG
GGAAATATGTGCACATGCTTTCTTTTCATGAAGCCAACAAGTAGTGTGGA
GCTACTTCTCGCCGACTGGATAAAGTCAACTGTTGACAGCGGGGCCAACC
AAGACCAGGTGAGCGACAAGGATCGATTCCAACTGCTCCGACAAGGAAAA
ATTGTCGTCCCGCCGTTCGTGTCGTCTGTGCCACCACTCGATTCTCTCCA
TGGAAAGGGGGCATAACAAAATTAGGCATGGCGAATAGACGTTGTCCCGA
GGTCATCATGTTAATATACTTCGTAGTACAACAAGGGCTTCGGACGCGGG
GACCCGTCCTCCTGCGTTGGTAGTTTGTGGTGAGTATTTGCTCCCGGAGG
GCGACGACATGAATGGTTGGTTACGGTGCGTATGTATGTTACCCAACATA
CTAAGGGTGGCGATATTTGTGGTCAGGTGGAGGACATTTGAGCAGAGATG
ATGACTTGCGGGTAAGCTTGATGCACAACTCAAGAAAGCTTCGTTTTGGT
TATATGAATCCACCAAAACTCTTGCAACATAAATAAATGCGTTGCCCTTG
TAGCGTAACTTACTGCTGCTCGCTGCGGGCAGTATTTTATTTCCATCACT
TGGGCGATGGAATATGCCAAGCTACGACAGCAGAACACCAACACACACAC
GCACGTCAGTTAGAAATATATCAAGATCCAAGCCAAGTCAGAGTCTGTTG
AAAGTTTGGCAGGGTTGCGATCGTGGAAGATGTTGCACCACTTTGTTGAC
ATGGGTTCCACGGACCTCGCCCGAGCCGAGCGCGTACGATCTAGCCCTTG
CCGGTGACGCGGTCGGGTTGGAAAGACTTTTTTGTCGGTGACGGCGCGAA
GGGGGAAACTAAGCGGTGCGGGCCCGCGCGCGCTAAGACAGTCAACGCTT
AACGTACTGGTTTCAGGGAGGGAGTGGAAGATGACCCGCTGCTCTCACAG
CGCTCGAGAGGACAAGAGTCAAATACGTGTAATATTGGTTACCTCTACAG
ACAGAAGAAATGATCGTCTGTCGGTTCCACTATGAACTTGAAATTTGAAA
AGGATGAAAAGCATTTCATAATACTAGACTACACTATGTACTGATACTAC
ATGTATAAACCTGATAACCTGAAACAATTTGTTCAAACACGTACTACTAC
GAATGCTAAATTACACGTACATTTGAATCAACCAGTATGTTAGTGTGCTA
CTTATCATTCGTAACTGGCTCAAAACCCTGTTTGTCCTAAGATGACGAAT
ACTCTTCCGACTCAAATTGAGACTACGAAACCCTAACGCTTGCAAATGTT
TGGACTCGATGCCCTATTGTGCTCGACACCCCAACCCCAAATCATTGGTG
GTGCCGATCTATTCGATGTCCATCATGTCGTTTTCTGTCCTTCAGCTTCT
TGCCACTCCCTTAGTGAAAGCTTGTACCGGTGTACTCGTCTCGATATGGC
TACCTGGGTAGCCACTGATGATGATACGACCTGAAGAAAGTCGCTCTTTG
TACACGCCCTTAAGGGTCATGGACCCTCCATTCATCCCCCTGCGGCGTGT
GTCGCTAGCTCGTTGATGAACTCGCATCCCTCCTCTCCAAGACGGCCAAA
GCTTTCCACCGCTAAGGCGTTAAGTTTAAGGCTGCGCTCGTCGAAGGACG
CGTGTCCTGGACGAGCGTAGTGCTGACGCTTTCGCGCCTCGGAGGCTTGG
GCTGCGGTTCCATCGCTAGTTGCGCTGCCATTCCTTAAGTGTAGCTGTGC
TTGCGGGTCTGCGTGGATAACGTCCAGGAGTATGCTCTTGTTGCTGTACT
CCGAAGAACACGCGTTTGCGAGTGCTCCTGGTCTGATCACGATGTCCATG
CTCATGTCCCGTTCCCCAGTGAACGGTGCTCCGCTCTCTCTCCACGTCGT
ATCTAACCCCAATGCCGTTGAGTGCCTTCGATAAAGCGAACTTCAACGGC
TCGTGCACCTCAACCTGCGCTCCATCCCGGTGGCAGGTCCGTGCATGCAG
TGTTGTGATGACCTCATTTTCCCTGCCTCTATGGCATGTGGGACATCCTG
ACGCCAATAATTCTCCAACTCCCAGGGCGCGTCGCAATGCGTAGGCGAAT
TCATTGGAGCCGTATTTCTCGAGCTCTGCCGGTGGGAGCCGCTCTCAAAA
AATGCGTGGGCTTCTTTGCCTTGGCTGCTCCTCACTCTTGCATAGGCCAT
TTCTTGAGTCTCTCTCTCCCCAAAAGGGGAAACATCTATTGAACGAGCAG
TGAACGTTAAGTTGGATTTGATTGGATCATCTGTCTGCAATTGTCGGAGG
GCAAACGAAATAATAATATTATTAATGGAAATGGAAAAATTGTTATTGAT
GGCGTTGTTTTTTTTTGCGCGCTTCTGAGCCGGCGCGCGTACATACGCAC
AGCTTGAAGCACAACCCTGCGCACATCACACACCAGCCCGAGAGAAGGAG
AGAAAGATCTTCGGCAACACCCCCCTCATGCTTAGTTATGCTGGTACTTC
GAAGTATGAGCTATTTGTGGGTGTGTGGTGATGAGTAACAGAGCCTGATG
CACGCCGCAAGCAACCAACGGTCGCCTGCCTGTGAGCAGACCTACCTCCT
GTCACTGACTATTCAACCACCCAAAACGAGATCCAGGGGAGACGTTCCAA
CCGCTGTAAACAAGGGCAGGCCGCAGAGACGCGCGCAGAGGTGGTCTGCT
GCCTATGTTTGAGCTCGAGGCCCAACATCAGCAGTGCGCGCGGAGACTTG
TATGTGGACGACACACACGAAGCACGCGGTCGTTGTTAGGAATGGATTCG
GTTGCCCAATGTGTTGTGATCACTTCTTCTCACGCCACCAGAGAAAAAGT
GCGAGGATCCACTGCTGCGGTAGACTAGCCGGCGCCATAAAGACACACTA
CAAAGGGCGTTGGGTACGTTCGTTCCAGCCCGCGCTCTGCTGTCGGCAGC
GCACGAGAGAGAGAGAGAGGTTATGCAGACTACAGACGAAACAACACACA
CACACACGCGGTCAACCTCTGTCAACCCATCCATCCATGCTGTCCACTCG
CCACAGAGTGCGGGCGTCGAAAATGAGGTTTATATTATTATGCTTCCTCC
TGTACCTTGACGGGCGATATCTGTAGAGCACATCATGGAGAGTGGTAGCA
TGCGTGTTGTCATACTTGTATATCTGCGGCTGGAGAGGAGATAGTTGTCG
AGCACCGCAGCAGCAGTAGTAGTAGGTGAAAAACCCGGAATTTTATTCTG
GACAGACAGTAAATATTTTGCACCGCTCGCTGTGCTAGCCGGCAAAGACC
CCAATTATTTTTTCTGAGAATCAAATGGTAACAACAATAATACCAGCCAC
AGCTTTACGATGGGTTCCTCCCCGACACATTTGCTCTTGACCCGGCAGAG
CGTTTCAGGAGATACAAGTAGATGTTTATTTATGACTTTTTTCAAGTATT
AGGTGCTTTTGTTCTCCACCTATCTATCTATCCCATGTTACGTCGCTACT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTATTGAAGAACCGTTA
AAACCCACCGCTTTAATATGGGTTTTATATCGCTTTGAGCGGAGGTTCAT
TCTTCGATGCCGTCCAGATTATTAATATCAATTGTGGGTCCACAGCAGCT
AGCAGTAGGTGGTACACAAATCGGCCACGTATCCCAACAACCAGAAACAG
GGACGGACGTTATTTGGGCGGTGCGATCATGATGTCCAACAAGTATGTAC
ACAACGGGACCTCTCTTCCACAAAAAAAAGAGAACACTGACCCACGGAAG
ATTCTTCGAAAAAAAACGACAGGAAATCGTCGCTGGGACTTCAACCGCAC
ACACACACAAACATACCACAGACTCCACAATGAGCCAACAACAACCGTCA
ACAGCGGCTTTTGTTGTTGCAGGTAATATTATGATCTAGGATGGGCACGT
ACGTGGTGGATTTGATATCTCAGTAGTACTTTTGGTACTTTTTTTGCGGT
TGGTCAATACTTCAGATTTTCGTACAACTTGCCACATCATCTTGTATTGC
ATGCATTATTAATTAAGAGGAAGGGTTTCACATGTAAAGTATCCATCAGT
GCTGCTTGGCGCCGATGTGCTTTCCGAATAATGCCGATTGTGCTGGCCAA
TAAGTTGAAATGGCGGATATATATATTTGAGGGTTGGTTTCGCTCCGATT
TATTGGCGGCGTGTTTTCATCATGATGGAGGAGTTGTACGTCGCCATCGT
TTCGGACGCAATTCCCACACAAACAATTTCGAAATAAGTTGATTTGTACT
TCCAGGTAGTAAGTGTGTGTGTTGTGTGTGTTTTCGTCCCATTTATTTTG
GCGACAGTCTCTTTCCGATCAAGGCGAGACGCGTACTACACGTTGCGGTG
TATTTAGAGTACTACACTAATAACTACTTGTTGTTCAGTATTTTTTTCTG
TACAACTAGAACCAACCAGGGTCACACAGGAAGAGGGGGTAAACAAACAC
TGACTGGGTGTGGGGCTTTTTTCTTCTTGTTCTGTTTATTGTTTGCCACA
CCTCCTTCCTCCTCCTGCGGTGCTTGCCTTGGATTTTATCCCGAGAAGGG
TCCAGCCATCCCTTTCTCTCGTCAACGTGCTAAGTCGAAGTTTGGTACTC
ACGAGCTTTTTCGGCTATCTATTTTGTTGTTATCGCTTTCACCGGCAAAG
TCGCAAAATAAACACCTTTCTTTCCTTGGAATTGAACTCCAGACTTCGCT
GCTAGTTAGTGGGTTCGAGGTTAAACCACCAGTCAGTCCACCGGGGCGAC
CGTCGCCAAGTGTGAGTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGT
ATGTAGTAGTAGTCCCTTCCGATCAAGGCGAGACGTGTACTTCACGTTGC
GGTGTATTTAGAGTACTACTACACTTGTTCAGTTCAGTGTATTTTTCTGT
ACAACAACTAGAACCAACCGGGGTCACACAGGAGGGGGTAAACACTCGGG
ATTTTTTCTTCTTTTTCTGATTTTTTTTTGCCCGACCTTCCTCCTGCAGT
GCTTGCCTTGGATTTTATCGTGACAAGGGTGCAGCCATCCATCCATCCCT
TTCCCTTGTCAACGTGCTAAGTCGAAGTTTGGTACTCACGAGAGCTTTTT
GAGCTATGTTATCGCTTTCGCCTGCAAAGTCGCAAAATAAACACCTTTTT
TTGCTTGGAATTGAACTCCAGACTTTGCTGCTAGTGGGTTCGAGGTTAAA
CCACTACCAGGTAGTAGTTTAGTCCACCGGGGCGGGGCGACCGGCTACCT
AGTACTCCGTAAAAAAAAAATTGTTTTCGCAGTTTTTTTTTAGGTTTTCC
TCCAGGTAGGAATTAATTTTGATCTACCTTCTTCGCACGCCTCGGGCGGC
AAAAACACTCATTATCATGCGCGAGGGCTTTGCACATTTATTTTTATGCA
AGATACCGACTGTACACGTTATTGCTAGGGTTGGTTTTTTGTCGCCCCCC
CCCGCCCCCAGTGGGCGGCGCGGTCAGAAGGTGAAGAAGGAAGGGAGGAT
TGAGAGACGGGAAATTGCAGGTCGATGTTCGTTCGTGGCAGTGGAAGGGT
GTAGGTAGGTGTGTGTACAACCGGAAATAGAGAAAAAAGAAGACGACGAA
ACATTGGAGATGGTGCCATGGGCCGAACGAAATGGAGACCGGTAAACGAG
GCAACATTCATTCACGAAATACTTCCACTCCGAGCTACTCACTTCAGTAG
TAGATAGGTATGAGACACAGTGAATGGTCCCCAACGGAGCGCTATTAATG
TACAATTTGAGTAAGGTGGAAACGGAGCGCCAAAGAAAGGAAGAAAAGTA
CTACGAATTGAAAAGTAGTAGACGTAGTAGTAGGTTTTTCAATCGGAATC
TCAAAGGCGCAGACAGTGATGCTGCGAACGGGCGGGTGTCAATGCACGAC
CAGAAATTAAAGTAGGCAACGGCGACATGAATAATACGAAAAAAGAAATC
GGAAGGGTGGCAACAAAACACGTGGAATAATACCGTCAAGGTACGGCAGG
TCAAATATGGTAAAAAAAAAAGAATGAAGGATTCCCGCGAATGGTATGTA
ATCTATATCGACGTAATATGTATGGGACAAACGCCGAGAAAAGAAGCCAG
AACGCAAGACGACGTCACAAGAAATACCGACGGGGACGAAGAACATTAAT
GAACGATATTCGGATGTCCGGTATGTAGGTTAACGAAGACCGACTCATGG
TACTGTACGAAAGGAAGTTCCGAGAGTCGAAAGGAAGAGATAATGAGGAA
GAAGGCCATTAATACGGCAATAACCAGCAACGTTTAGCGTATTAGTCTAG
TTGTACAATCGAGCACTCATTCATGGGTCCTGGGTGCTTCCCCTCGCTGC
CTTGGCAAGGCTTTTGCTTAGGCATGGCCCATAGCGAGGGGGGGGGTATT
TCTAGCGAGAAAGGCTAGATTCACCCTCAAGCGGACCGATACCTTCTTGC
TGCTGAACACCCGCCGCGAGGCGTGCGCAGCGGTGGAGTTGGGTCGGCAC
TGGTGCGTGAGGCACAAAAGTTCAGATGCACGGGCCTTTATGGCCGTCGG
TGTAGGCAGCTATGCCCATCTCATTTTTGTGCGGAGAGGCAGACGCCACC
AGAAAGGTGAACGGACAATACGTACACGGCCCTAGGTTTGCTAGAGGGAG
CTGCACTGTCTCAGTAACCTGGCTTCGCTTCGCCATCAAAGGAGAGGGGT
GGGCGGCGACGAGCTGAAGACTGGGCTGGTTGACCCCTTCGGCGCGAGAA
ATTTTAAGACCAACCACCCTAAGTGCAACGAGGGAGAGGACCGGCTGGGA
AGGACAGCAACGAGGGCGTGAACGGACGGAGCGGGCCAAGTGTGGCTGCG
CTAGGACTGGCCACAGCGGCACCGGAGCAGCGGCACCGGAGCATGCAGAT
GACATCGAGCCGTGGCGCACGGACAAACATCATGTGTTGGCAAATTATTT
CGTATTTTGTTTTTTCCCTGAAAGTTGGTGTCGGTTTTCGTGACGACGTC
ACTGGTTTTGTAGAGAGGCGCGGTAGAGATGGCGCGGATACCCCGGCGGG
TGCCTTAATGTGTGTAACTGCTGTTAGTTGTTAGATGTACAACTTATCCA
CTGAACTGATAGTCAGCCGCTGACTTTTAGTTCAGTGGATAAGTTGTACA
TCTAACATGGTAAACATCTGTTGAACGAGCAGTGGATGTTGAGTTGGATT
TGATTGGATCTGTCTGCAATTGTCGGAGGGCAAACGAAATAACAATAATA
ATAATTAATTGTGGTTGGTTTCGGTTTTAGATTCATTCGCGAACGAACCC
CCGAACTTTTGACTGTCTGCTGCGGTTGGTTGTCGACAACTCAGCCTCAA
CAGCAGGCCTGCTCATACCAACACACATCACACCCTTCTCCATGATGACC
TCTATTGATATCGAGATGTGGTTCCACCTCTGACTCTGTCGTGTACGTAC
CGCACGCCCGGAAATACATGCCAAGGAGTGTTGGTGACGAGTTGGTGATC
GATCGTAGTGAAGAAAAAAAAACGTGGCCAGCCAAGTTTAGCGACGAAAC
GAGGGAACAGACAATTTCAGCTGATGATCCCATCCTGCAATCGTATTAAC
TTCATTTCCACGAACACCACCACCACGCTTCAGCGACTACGCCTTGCCCG
CAACCCTGCCGTCACAACCTTGCTTCATATCACAGGCCTTCTGACTCCAC
CGCCCAGTGGGGGCGGGGTGCCAATCACAGTCTATGAATTACACTACCTA
GTCTTACGAGATCTTTCATGAGATCTCGGGAAATTTCGTGAGATTTCCGA
CCAAACTGCTTGAATCACCGTAACATCTCCTTACAAAATCTTACAAGGAG
TATTATGCCGAGAGTGTCAGCGAACGTTACAAGAAATCACGAGTTTTCAA
AGCCCGAGTATGTAGTGTGAGACGTGTCGCGAGACCGTTTTACAAAATTT
CGACGAGACGTCTCGTGTACAGGTTTCGCGAAAATCTTGCGAGATCCGCC
GAAACTTGGTCAGATCTCATGACTCCAGCTACAGAACTAGAGTTTGTTGC
ACGATGAGCCTTGCAAAGTCCCGCGAAGTGCAGTATTATTCGCTAGGCCT
AACGTAACCCTAACGCTGATCCAAACCCAAGCCATCAAGGGCATTGTTTG
GCTAAGTTCTACGTTACTGGGCTTTGGTTGGGCGGCAGGAGGTAAGTAAG
GCTAGGCCAGCCGCGGCTTTAGCCGAGACATGTTTGTAAAGGAAGTCACT
AGCATGTTTGGTGGGAGCAATTAGAAACAAGGACAAATTTGCCGAGAAAT
CTCGGGGCATCTCGTGCGGTCTTGCCATAGTTTGAAGTATAAGACCTTGC
AAAACCGGTAGCTCACGAGATCTCTCTCGTGGAGACCGCAATAATAATAG
ATCTGGTTACACCTTACGAGATATCGTAAGGTCTCCTGGAGCCTGACGAA
AAATTCGTTGAGGTCTCATCGGCTCTGGGGAGACTTCACGAGATCTTCCA
AGATCCACGAAATCTTATGGAAATGCGTGACAACCCGACGAGATGCGAGA
TCTCGTGATACTACGCCCAACTACGTAGATCCTTGGTTGTTTTCGGTCTT
GCAAAAAAAGGGAAAATGCCGAACACCAGCTTGACGAATTTGGGTGCTGA
AACTCGCTGTCGAGAAGCAGCAAATAAAATGTTAGGGTATTATGCCCGCC
TCATAGAATAAATTACCTTTGGCTTTGTTTGTCGGCGAATGGTGGTATTG
CTGTGGGAATTTCTCTTCAACCGTAGTATTGCCTCTTGGAGTGGGCTTTG
ATAAAGAAAGTCAAAAACGCTTTTTTGGGTTAGGGAACAACAATCAATGT
ACTCCGTAGGTTTTTGCTTTTTTTGTCGGGCTGGCACCGAACAGAGCGTC
AATCTTTTCTGCCTGGGAAAGGCGCACCGTAGAAGAAGCGTTGACATAGA
GATACCGAGCCCCGCGTCCCACGCCTCGCCCGAGAAATCGTTTGGCGTCG
ATGGCTACATGGTTATTATGATGCAAACGTGCTGCAAACGCACGTACGCG
AAGAAGGCGACCCGTCTGTATGTGAGATACGAACGACTCAGCCCCCTTTT
TTTGTCCGTCGTCGCTTTTCATTCTTCAACGTGATCCAGATGGCGTTCCA
AGGACCGTTTCATCAGGCGTTAAAGACGGGGCTTCGACATGAAGAAGTCT
CGAAGGATCAATTCCCATCCGGGAATCAATTCTTCACGCACCCTTTTGAG
GACAATTACACGCATATTTACTTTCCAAATATTGTGATTGTGCACAACAA
CTGGATAACCGGACACACGGCGAAGAAGAGAAGGTTCGAAGAGTACCAAC
TATGGAATGTTACGGAAACAACAGCAGTGTTTCCATCGTGTGAATCTTAA
CTTTTTGGATGTCTGGTAGAGTAGCGGCGTTTGGGATTGTCATCGTTTTG
GTTCATAGTTGCTCGAGTGGGTGTCTCGTTGAGGGACAGCGGCGTCGATC
TCTCCGTCGTTTCGAATGGTCGCGGTGACAGCAAGGTTACTCGAAGGTCC
GCCTCTGAGAGACGCCCTTTCGGCGTCGTGATACCGGTCGTGTCTCTCTG
TCGTGGAGCAAAGCGTGGTTTGTTGAGTATTATGCCTGTCTCTTCGGTCA
CTCTGTTCCTCCTACTACTGCTGTTCTCAATTGATTTTTTGGTGTATCCA
CGGAGGAGCAAGTCGTTTATTTCTGCACCACCGGCCAGTATGCAAGATTG
TTATCACCGCTGCATACATCATTGCAGGCGGGTGTGGGAAGCCTTTTCGG
CTTGTCTTAGTCGTCTCTCCTCCACTAGCGTGGTACCTGATTTTTCTGGT
GTTTTCCAACACTTACCTTATATTTCTCTTCCGAGGAGTGGCATATACCC
TGTTTTTGAGATTTAGCGCCAGCGAGGCGCGAGATCCGTCGCGGTCCAGT
TTATTTAGTGTCGCGCGGCACGTGTGTACCATATGACCTGCTTAGTTTCT
TTGCGGCGTCGAGTGCGCCCAGTTTTGTGACCACGGGCTCCCATGGATGC
TTTGGAATAGAGAGCTACTAATAATGTGAGAAACAATCAAAAAACAAAAA
AACATCAACAACGCAGAGAGACCGCGAACGGGTTAGTTACGATTGGATGT
GCCCGACCCCATATTGGGTGGTGGATGGAGTAAATTGTAGCGTCTCATTT
GGAACTACTTGGTC back to topCoding sequence (CDS) from alignment at C-linearis_contig10:3609243..3622356+ >mRNA_C-linearis_contig10.674.1 ID=mRNA_C-linearis_contig10.674.1|Name=mRNA_C-linearis_contig10.674.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at C-linearis_contig10:3609243..3622356+ (Chordaria linearis ClinC8C monoicous)
ATGGCACTAACCGGACTTGACGTTCGCAACAAAACGGTGAACAAGTCAAC
TCTGAGTGACTTCTTGCCGACGCTAGTCAACGGTGCCAACCAGCGTACGG
GGGCGCTTGTGCTGGTCGACGGTACTCAGATGGTGTCATCCATGTTCGAC
ACTAGAGGAATCAACGGCGTCAGCAATGCAACGGTGGCCGATGGAGAGAA
TATCAGAATCGGAACACTGGAGCTTGCTCTTCTTCGCAGCGAGGATGGCG
TTGTTTCCATCGGCCCAGCGCCGTGGCCCCCGGAGTATGTGCTGGAGTAC
GTGGCTACTGAAGAAGGAATCGTTATTGTGAACAGTGTCAACTGCGGGTA
TCTGGACTTCGCGATAAACTTCTTGCAAGCTGCGCAAAAAGTCATTCGTG
ACGTTAAGATGGCACTAACCGGACTTGACGTTCGCAACAAAACGGTGAAC
AAGTCAACTCTGAGTGACTTCTTGCCGACGCTAGTCAACGGTGCCAACCA
GCGTACGGGGGCGCTTGTGCTGGTCGACGGTACTCAGATGGTGTCATCCA
TGTTCGACACTAGAGGAATCAACGGCGTCAGCAATGCAACGGTGGCCGAT
GGAGAGAATATCAGAATCGGAACACTGGAGCTTGCTCTTCTTCGCAGCGA
GGATGGCGTTGTTTCCATCGGCCCAGCGCCGTGGCCCCCGGAGTATGTGC
TGGAGTACGTGGCTACTGAAGAAGGAATCGTTATTGTGAACAGTGTCAAC
TGCGGGTATCTGGACTTCGCGATAAACTTCTTGCAAGCTGCGCAAAAAGT
CATTCGTGACGTTAAGGTTTTATGGGTGGCCACGGACGACGTTGCGTTCG
ACTTCATGGACACCATGGCCCCTGGATGCGCTGCTATGTTTCCATCGCCG
AACTCGGTTTTATGGGTGGCCACGGACGACGTTGCGTTCGACTTCATGGA
CACCATGGCCCCTGGATGCGCTGCTATGTTTCCATCGCCGAACTCGGAGC
GTCACCACGCAATTGGGGCTGGCGGTTTTGGCGGCGAGATCTTCAAGACG
CAAACGCTCATCCGACCGGGTATTCTGTCGCACATTGTGAATCAAGGGTT
CGCCGTGCTTTGGACCGACTCCGACATGGTGTGGCTGAAGTCTCCCATGC
CGCTACTACCAGATGTTGATGACCCGGAAGCGGAGCGTCACCACGCAATT
GGGGCTGGCGGTTTTGGCGGCGAGATCTTCAAGACGCAAACGCTCATCCG
ACCGGGTATTCTGTCGCACATTGTGAATCAAGGGTTCGCCGTGCTTTGGA
CCGACTCCGACATGGTGTGGCTGAAGTCTCCCATGCCGCTACTACCAGAT
GTTGATGACCCGGAAGCGGCGGATCTCATGCTTCAAGTCGACTCTCCGGG
AAATATGTGCACATGCTTTCTTTTCATGAAGCCAACAAGTAGTGTGGAGC
TACTTCTCGCCGACTGGATAAAGTCAACTGTTGACAGCGGGGCCAACCAA
GACCAGGCGGATCTCATGCTTCAAGTCGACTCTCCGGGAAATATGTGCAC
ATGCTTTCTTTTCATGAAGCCAACAAGTAGTGTGGAGCTACTTCTCGCCG
ACTGGATAAAGTCAACTGTTGACAGCGGGGCCAACCAAGACCAGATGGCG
TTCCAAGGACCGTTTCATCAGGCGTTAAAGACGGGGCTTCGACATGAAGA
AGTCTCGAAGGATCAATTCCCATCCGGGAATCAATTCTTCACGCACCCTT
TTGAGGACAATTACACGCATATTTACTTTCCAAATATTGTGATTGTGCAC
AACAACTGGATAACCGGACACACGGCGAAGAAGAGAAGGTTCGAAGAGTA
CCAACTATGGAATGTTACGGAAACAACAGCAGTGTTTCCATCGTGTGAAT
CTTAAATGGCGTTCCAAGGACCGTTTCATCAGGCGTTAAAGACGGGGCTT
CGACATGAAGAAGTCTCGAAGGATCAATTCCCATCCGGGAATCAATTCTT
CACGCACCCTTTTGAGGACAATTACACGCATATTTACTTTCCAAATATTG
TGATTGTGCACAACAACTGGATAACCGGACACACGGCGAAGAAGAGAAGG
TTCGAAGAGTACCAACTATGGAATGTTACGGAAACAACAGCAGTGTTTCC
ATCGTGTGAATCTTAA back to top
|