mRNA_C-linearis_contig10.654.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE) HSP 1 Score: 638 bits (1646), Expect = 4.680e-226 Identity = 325/481 (67.57%), Postives = 359/481 (74.64%), Query Frame = 1
Query: 1 CSGELETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCQPADGDESGRVLLDVHLSVAVLYAVAYIGWKHMPWCADEITALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEW-------------------------------------------------EPYIRTMPHSEYPS--GSSCVC-----EESVPAGVELCGGDEMAVSIAASIDALTAGDESAAVFDRDIGELMLRPL 1275
CSGELETPIG+RL T LD FSLGSMFE NGVALDIFGDK+TSDARRRCQPADGDE G VL ++HL VA LY AY+G +HMPWC D ++ALME G ++++DVAD STDTPWGLAKAY+DE M FL++NDGWNADGG+GGKEFNRIPFTGDFSY DS GNEW+GYTP NTPY+F RTKKWQPLLESDGLGYIT QEHVTPHIG+TARFFGFDTAE+EEAW SR+LD PPY NRHDE+AREVLE SK+AADDPAKQFAISFFDNK TSL+PL YF R DTLS L+F K+ +K QL IYNGVVL+WREK+RHDAPRPPSVVR EIGDEIVEAYAG +G+QNMTASEW +P + SE G S V EESVPAGVELCGGDEMA+SIAASID LTAGDES AVF RDIGELMLRPL
Sbjct: 58 CSGELETPIGMRLFTALDAAQFSLGSMFESNGVALDIFGDKETSDARRRCQPADGDEDGAVLFNMHLGVAGLYMAAYVGSEHMPWCTDTVSALMEAYGAPLSMLDVADA----STDTPWGLAKAYVDEVMSFLMENDGWNADGGLGGKEFNRIPFTGDFSYTDSGGNEWNGYTPKNTPYKFARTKKWQPLLESDGLGYITAQEHVTPHIGVTARFFGFDTAENEEAWGSRKLDAPPYRNRHDEIAREVLEASKLAADDPAKQFAISFFDNKATSLLPLMTDYFAQRRDTLSRLEFFKVNLKLQLGIYNGVVLSWREKIRHDAPRPPSVVRNEIGDEIVEAYAGPDSGVQNMTASEWVDRSVRIFQGTDTERKQERFHMQQEYHKKTGRVWAGTDTINPPLEQPEEDPLVSFASWSEISEMCGDSRVWGGLHFEESVPAGVELCGGDEMAISIAASIDGLTAGDESVAVFKRDIGELMLRPL 534
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE) HSP 1 Score: 570 bits (1468), Expect = 8.890e-200 Identity = 291/487 (59.75%), Postives = 340/487 (69.82%), Query Frame = 1
Query: 79 MFEPNGVALDIFGDKQTSDARRRCQPADGDESGRVLLDVHLSVAVLYAVAYIGWKHMPWCADEITALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPY---------------------------------EFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCE-------------------------------------------------------ESVPAGVELCGGDEMAVSIAASIDALTAGDESAAVFDRDIGELMLRPL 1275
MFEPNGVALDIFGDK+TSDARRRCQPA E RV+ D+HLSV+VLYA++YIGWK+MP+C+++I A E LG ++LVDV +G PEP TDTPWGLAKAYIDE FL++NDGWNADG +GG+E N PFTGDF ++DSAGN WDGY P N+PY +F TK+WQPL+ES+GLGY+ +Q HVTPHIG+T RFFGF+T+EDEEAW +R LD PPY NR+DE AREVLE S VAA DPAK FAIS FDNKF SL PLKI YF R D LS++DFL++++KSQL IYN V+LAWREKVRHDAPRP SV+R E+GDE+V+AYAG GIQ + ASEWEPYIRTMPHSEYPSGSSC+CE E+VPAG ELCGGDE+AVSIAASIDALTAGDESAAVF RD+GEL+LRPL
Sbjct: 1 MFEPNGVALDIFGDKETSDARRRCQPAT--EEDRVIFDLHLSVSVLYAISYIGWKYMPYCSEQIAAEAEALGGPMSLVDVGEGHPEPGTDTPWGLAKAYIDEVWAFLMENDGWNADGRLGGREVNLTPFTGDFVFSDSAGNTWDGYEPKNSPYKTGRELAFFAHDLAILSAVRCAPCSFPKNCRRSQFSSTKRWQPLMESNGLGYLNSQVHVTPHIGVTGRFFGFNTSEDEEAWGARTLDRPPYQNRYDEAAREVLEASTVAAYDPAKLFAISLFDNKFNSLPPLKIVYFFDRGD-LSLMDFLELSVKSQLAIYNSVLLAWREKVRHDAPRPTSVIRNELGDELVDAYAGPDIGIQTIKASEWEPYIRTMPHSEYPSGSSCICEGFASALRLWAGNDIIDPPIGFPPPEFGGPILEFSSWTEISQMCGDSRVWAGLHFEEAVPAGAELCGGDEIAVSIAASIDALTAGDESAAVFKRDVGELVLRPL 484
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI) HSP 1 Score: 471 bits (1212), Expect = 7.110e-161 Identity = 232/426 (54.46%), Postives = 304/426 (71.36%), Query Frame = 1
Query: 1 CSGELETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCQPADGDESGRVLLDVHLSVAVLYAVAYIGWKHMPWCADEITALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTL--SMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEESVPAGVELCGGDEMAVSIAASIDALTAGDESAAVFDRDIGELMLRP 1272
CS LET + +R L + ++ +S+ S F+P V L+IFGD+QTSD RRRC P D E+ L +H VA LY +A+ K MP+C EI LM L ++ ++ + T TPWGLA+AY+DE D+L NDGWNADG MGG+EFNR+PF+GDFS DS GN W Y P N+P EF TKKWQPL ESDGLGYITTQEHVTPHIG T R+FGF + EDEEA+SSR +D P Y+NR+ +V +VL+ S + AD KQ AISFFD+K SL+PL + YFL + + +FL+++++ QL +YNGV+L W+EK+ HD PRP ++++ ++GDE+VEAYAG G G+Q M ASEWE ++RT P SEYPS S+C+CE +VPAG ELCGG +MA+SI S++ L AGDESAA+F D+GELM+RP
Sbjct: 66 CSSGLETSVAMRTLLAIQSSSWSVASAFQPPPV-LNIFGDRQTSDERRRCYP-DTPETIE-LFSLHYKVAALYVLAHAALKAMPFCHAEIDPLMLGLDHPMSFMEEGEDA-SIDTSTPWGLAQAYVDEGWDYLTANDGWNADGSMGGREFNRVPFSGDFSMTDSEGNSWTPYVPRNSPNEFTDTKKWQPLEESDGLGYITTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRTIDRPDYLNRYKDVVHDVLDESAMTADSLYKQVAISFFDDKVNSLIPLSVDYFLRNTTQAEYTTTEFLQLSLEIQLALYNGVLLTWKEKIHHDRPRPSTMIKHKLGDELVEAYAGPGEGVQTMKASEWESFMRTNPTSEYPSASACLCEGAVPAGAELCGGMDMAMSIHDSLERLKAGDESAAIFKTDVGELMVRP 487
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: D8LSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP1_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 5.050e-140 Identity = 210/403 (52.11%), Postives = 261/403 (64.76%), Query Frame = 1
Query: 247 MPWCADEITALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDT---LSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEE----------------------------------------------------------SVPAGVELCGGDEMAVSIAASIDALTAGDESAAVFDRDIGELMLRP 1272
MP+C EI LM G ++ ++ D T TPWGL +AY +E D+L NDGWNADG MGG+EFNR+PFTGDFS DSAGN W YTP N+PYEF KKWQPL ESDGLGY++TQEHVTPHIG T R+FGF + EDEEA+SSR++D P Y+NR+D+ R+VL+ S + AD P KQFA+SFFDNKFTSL+PLKI +F R T + DF ++T++ QL IYNG++LAW+EK+ HD PRPPS++R +GDE+VEAYAG G+Q M ASEWEP+IRTMPHSEYPS S+C+CE +V AG ELCGG++MA SI S + L AGDESAA+F D+GELM+RP
Sbjct: 1 MPFCRAEIEPLMIARGHPLSFLEEGDDD-SIDTSTPWGLGRAYANEIWDYLGANDGWNADGSMGGREFNRVPFTGDFSMTDSAGNSWTPYTPRNSPYEFTNFKKWQPLEESDGLGYVSTQEHVTPHIGSTGRYFGFSSKEDEEAFSSRKIDGPDYLNRYDQAVRDVLDESAITADSPYKQFAVSFFDNKFTSLIPLKIAFF-NRGTTKEDYTETDFYQVTVEVQLAIYNGILLAWKEKINHDRPRPPSMIRHLLGDELVEAYAGPDQGVQTMKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGDDKIEPALEFPPGPPPAGLNASLEFASWSEISQVCGDSRIWGGMHFAGAVLAGAELCGGEDMAKSIHDSFERLKAGDESAAIFKSDVGELMVRP 401
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A6H5K7C3_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C3_9PHAE) HSP 1 Score: 410 bits (1054), Expect = 6.970e-138 Identity = 207/418 (49.52%), Postives = 266/418 (63.64%), Query Frame = 1
Query: 205 VAVLYAVAYIGWKHMPWCADEITALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDT---LSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEE-----------------------------------------------------------SVPAGVELCGGDEMAVSIAASIDALTAGDESAAVFDRDIGELMLRP 1272
VA +YAV + K MP+C EI LM G ++ ++ D T TPWGL +AY +E ++L NDGWNADG MGG+EFNR+PFTG+FS DS G+ W Y P N+PYE + K+WQPL+ESDG+GY++ QEHVTPHIG T R+ GF + EDEEA+SSR +D P Y+NR++EV +VL + A+ P KQFAISFFDNKF SL+PLKI +FL RS T + DF ++T++ QL IYNG++LAW+EK+RHD PRPP++V+ ++GD +VEAYAG G G+Q + ASEWEP+IRTMPHSEYPSGSSC+CE +VPAG ELCG +MA SI S++ L GDESAA+F DIGELM+RP
Sbjct: 8 VAEIYAVTHAALKAMPFCRAEIEPLMIARGHPLSFLEEGDDD-SVDTSTPWGLGRAYANEGWNYLTANDGWNADGSMGGREFNRVPFTGEFSMTDSEGHSWTPYVPRNSPYELTKIKRWQPLMESDGVGYVSIQEHVTPHIGSTGRYLGFSSKEDEEAFSSRTIDAPDYLNRYNEVVHDVLNETATTAESPYKQFAISFFDNKFNSLIPLKIAFFL-RSTTQEDYTATDFYQVTLEVQLAIYNGILLAWKEKIRHDRPRPPTMVKHKLGDALVEAYAGPGQGVQTIKASEWEPFIRTMPHSEYPSGSSCLCEAFAKQIENFLGDDTIEPALQFPPGPPPPGFDAPPLEFASWSEISQVCGDSRAWGGMHFAGAVPAGAELCGSTDMAKSIHDSLERLKVGDESAAIFTTDIGELMVRP 423
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A8J5X3W0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3W0_DIALT) HSP 1 Score: 232 bits (592), Expect = 3.230e-67 Identity = 146/404 (36.14%), Postives = 215/404 (53.22%), Query Frame = 1
Query: 16 ETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCQPADGDESGRVLLDVHLSVAVLYAVAYIGWKHMPWCADEI-TALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEW--DGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEESVPAGVELCGGDEMAVSIAASIDALTAG 1218
ETPI RL + + ++ + + P+ ALD F + S ARRRC +G L VH VA+ Y +A+ P + ++++ G +++ D A+ TPWGLA+ +DE DF K+DG+NADG + ++FNR+P+ +W + Y+P N+ +KR + WQPL E DG GYI Q+HVTPHIG TAR F ++E +R L P Y+ A +L S+ A + K+ + FFDNKFTSL+PL + Y F+ + + + IY+ ++ W+EKVRHD RPPSV++ + DE V +Y G ++ S+WE YIR MPH+EYPSGSSC+C V A V G ++ AA + + AG
Sbjct: 67 ETPIQGRLALRVTLPLATMAAAYHPS--ALDAFARESMSAARRRCGSTVDYAAGDALF-VHRQVALAYTLAFTVDTVFPEANKGLLSSILTSWGLDMSICDTANCS---DVSTPWGLARTAVDELEDFF-KHDGFNADGSLS-RDFNRVPY-----------EDWRAESYSPVNSADRYKRKRLWQPLPEHDGRGYIANQQHVTPHIGWTARPF---VLTNDEVCDAR-LAPPQYVLN----AEALLVLSRTGALNSTKKMEVEFFDNKFTSLIPLLVQYTARLGVNADSFHFIWLDVATAAAIYDATIVGWKEKVRHDLVRPPSVIQSQFRDETVMSYRGPSEEPGDIKGSDWEAYIRIMPHAEYPSGSSCLCRAFVEALVTFEG-----ITAAAPVPPMGAG 438
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: R7QSC8_CHOCR (PAP2/haloperoxidase-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC8_CHOCR) HSP 1 Score: 210 bits (535), Expect = 5.410e-59 Identity = 133/374 (35.56%), Postives = 193/374 (51.60%), Query Frame = 1
Query: 16 ETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCQPADGDESGRVLLDVHLSVAVLYAVAYIGWKHMPWCADEITALMEDLGCSITL-VDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEW--DGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVC 1128
E PI + + +T+++ FE +ALD +G+ Q R C D S L + SVA+ Y P E +L+ G + L D + +TPWGLA + +D+ + DGWN DG + +E+NRIPF +W D Y P+NTP+E K+ + WQPL+E + +G++ QEHVT HIG +G D+E + S E +P Y ++DE RE++ S A D + + FDNKF+SLV L+I F++ S +Y V+L W+EK+ HDA RPPS + +++ + + AYAG G + M A +WEPYIRTMPHSEYPSGS+C C
Sbjct: 64 EPPIQFYYVQNIVSTLYNTMGSFEE--LALDAWGNDQPV---RFCN----DSSNFAL---YRSVALAYITHMCFSNSFPELRAEFDSLVTPWGINPKLCTDSSKPNACGDINTPWGLAFLRYRQFLDWTSR-DGWNRDGAIS-REYNRIPF-----------QDWTQDPYVPENTPWELKKKENWQPLMEDNNIGFLFYQEHVTAHIGQ----YGRSLYVDDEDYCSAEAPKPKY--KYDEELRELIRRSAAMAQDDVAKAKVQIFDNKFSSLVFLQIDLLFANGFHADSWKFIEADTISAAALYESVMLVWKEKIAHDACRPPSRMVRDLAGQKIFAYAGANQGKKQMRAEDWEPYIRTMPHSEYPSGSACFC 406
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A448Z7Y0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7Y0_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.150e-58 Identity = 137/405 (33.83%), Postives = 206/405 (50.86%), Query Frame = 1
Query: 16 ETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCQPADGDESGRVLLDVHLSVAVLYAVAYIGWKHMPWCADEITALMEDLGCSITLVDVADGGPEPSTDTPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRTK----------------KWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEESVPAGVELCGGDEMAV 1182
ETPI R+ V+++ +MF P ALDI+G +A+ YA AY +P + +T +M+++ ++ + ++ D P P TPWGLA+A +D+ ++ K+DGWNADG + +FN++PF GDF Y E+ Y ++ T W+PLLE+D GY + QEHVTP G T R +G T E+ E+++ PP N E + ET + A DD K+ + +D+KFTSL+P++I + + +S +F + + +Y+ +L WREKV HDA RP +VV GDE V YAG G + + AS+W+P+IRTMPH+EYPSGSSC+C L G D+ +
Sbjct: 89 ETPIQFRVALYQGNAVYNVAAMFHP--FALDIWG-----------------------------LAITYAFAYSAMVLIPSITEPLTFIMDNV-LNLPMSNLLDESP-PDIGTPWGLARATVDDMTEYS-KSDGWNADGSLA-NDFNKMPF-GDFDYM-----EYSRYKAKDSLGSLNATALKEKVCGQDGGERTTWNWEPLLETDYRGYFSKQEHVTPFAGFTGRLYGL-TVEEYESFAIA----PPEYNYCQEADFVLSETREAATDDQ-KKAEVEAYDSKFTSLLPMQINWSIATG--VSSFEFWYMDMALVTAMYDATMLVWREKVVHDAVRPTTVVHALKGDEEVTTYAGPYEGSKTIRASDWQPFIRTMPHAEYPSGSSCICTAYAETLQALTGSDDTGI 444
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A7S3Z7G8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7G8_9EUKA) HSP 1 Score: 153 bits (386), Expect = 1.740e-37 Identity = 128/408 (31.37%), Postives = 197/408 (48.28%), Query Frame = 1
Query: 16 ETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCQPADGDESGRV--LLDVHLSVAVLYAVAYIGWKHMPWCADEITALMEDLGC----SITLVDVADGGPEPSTD--TPWGLAKAYIDESMDFLVKNDGWNADGGMGGKEFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRTKKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPA----KQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPIYNGVVLAWREKVRHDAPRPPSVVRKEIGDEIVEAYAGTG---------NGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEESVPAGVELCGGDEM 1176
ETPI R+ +D V++ S F+P ALD+FG R C DG +G + L ++A Y+ + + P D+++A E LG + T+ D T + LA+ DE + + +NDGWN++GG+ FNR P+ DF + D +G + Y+P E KR W PLLESD +G+ Q+HV P IG T + + + + + +P Y + E + + ET+++ A++ + A+ FD+KFTS++P I Y + F +Y+GV+L WREKV DA RP ++ + IG YAG +G + + +E+EP IRTMPHSEYPS S+CVC+ A + G D +
Sbjct: 47 ETPIQFRIAEIVDLAVWNAISGFQP--AALDVFGRDV-----RYC--VDGIPAGEIDRLTGYTATLAFTYSASLL-IDAFP--IDDVSATYEALGLGGLWNETIAPDFDSSQCSGTCAVSVAVLARCATDEMVSYF-ENDGWNSNGGLT-STFNRNPYE-DFGFTDKSGERYTPYSP-QVNSEAKRA--WTPLLESDSIGFFFEQQHVVPFIGFTGKNVLTKDRDRCQYYKDNQAPKPKYD--YPEELQTLFETTRITAENNTEGDRRLAAVEIFDSKFTSILPAWIDYAVANG--FDNWGFWSTQTLLSTALYDGVILVWREKVIFDAIRPTTLAQT-IGRGTAFTYAGPYGSNFGGPFVDGPEVIKQTEFEPVIRTMPHSEYPSASACVCQAFFDALADKLGSDSI 431
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Match: A0A7S2GXC0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXC0_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.000e-36 Identity = 98/265 (36.98%), Postives = 148/265 (55.85%), Query Frame = 1
Query: 370 AYIDESMDFLVKNDGWNADGGMGGK-EFNRIPFTGDFSYADSAGNEWDGYTPDNTPYEFKRT--KKWQPLLESDGLGYITTQEHVTPHIGITARFFGFDTAEDEEAWSSRELDEPPYMNRHDEVAREVLETSKVAADDPAKQFAISFFDNKFTSLVPLKITYFLGRSDTLSMLDFLKITIKSQLPI---YNGVVLAWREKVRHDAPRPPSVV--RKEIGDEIVEAYAGTGNGIQNMTASEWEPYIRTMPHSEYPSGSSCVCEESV 1140
+ I + M DGWNADG G+ + N +PF+ + GY P N Y+ K+ +KWQPL+ESDG G+ QEHVTPHIG+ A + +SR++++P Y N E L T ++++ D K+ AI FDNK +++ L L R LS F ++ + S + + Y+ V+LAW+EKVRHD RP +V+ R+ E + +AG G++ +A E++PYIR MPH+EYPSGS C+C+ ++
Sbjct: 222 SIIAQDMLMYSSGDGWNADGMDNGRCKNNCLPFS-----------DTIGYEPKNV-YQRKKAFKRKWQPLMESDGRGFFYRQEHVTPHIGLKA----VPRVLSRKEVNSRKVEKPLY-NLEKEAG---LVTERLSSLDDEKKMAIELFDNK-VNVINLLSRGLLFRY--LSDFTFERVILFSTVYMASEYDAVILAWKEKVRHDLVRPTTVIQQRRYNTPENITTWAGPYKGVETFSAKEFQPYIRVMPHAEYPSGSGCICQSNI 463 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.654.1 >prot_C-linearis_contig10.654.1 ID=prot_C-linearis_contig10.654.1|Name=mRNA_C-linearis_contig10.654.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=426bp CSGELETPIGLRLLTGLDTTVFSLGSMFEPNGVALDIFGDKQTSDARRRCback to top mRNA from alignment at C-linearis_contig10:3327533..3332203- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.654.1 ID=mRNA_C-linearis_contig10.654.1|Name=mRNA_C-linearis_contig10.654.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4671bp|location=Sequence derived from alignment at C-linearis_contig10:3327533..3332203- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:3327533..3332203- >mRNA_C-linearis_contig10.654.1 ID=mRNA_C-linearis_contig10.654.1|Name=mRNA_C-linearis_contig10.654.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at C-linearis_contig10:3327533..3332203- (Chordaria linearis ClinC8C monoicous)back to top |