mRNA_C-linearis_contig10.650.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE) HSP 1 Score: 664 bits (1714), Expect = 1.470e-229 Identity = 326/401 (81.30%), Postives = 348/401 (86.78%), Query Frame = 3
Query: 792 KKASELWHIHGKHFDLTPFLGQHPGGSSILEAMRGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPEDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAYLRGLREGNLWHVSITAASGDTRWYEYLTYVAAVGLHVLGGSVVVSFCYFMGISMAYHLCVAPDHDTFESSIVNSIETKRDKERRRA 1994
KK SELWHIHG+HFDLTPFL HPGGSSILEAM+GAEDITPVFESYHALAHSAAIRQSLEKFEW GKLVDDVSEREAALVGG KEP+RYRWDEGGFYAVLTARVK +FL+KHG G DPR ASVNRFVKAP +WY+KELLIL VY+PLF MLGY + G G++L P PL W RA AAVLAG LLQSFSFCTLHDASHYGLLFKRPRVQEV+SR+CNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAP +QYDPFLV+WQRFFAP FMM+ PGA+LGQTQAYLRGLREGNLWHVSITAASG TRWYEY+TY A VGLHV+GGSV VSFCYFMGIS+AYHLCVAPDHDT ESSIVNSIE KR+ ER+RA
Sbjct: 87 KKTSELWHIHGRHFDLTPFLDHHPGGSSILEAMKGAEDITPVFESYHALAHSAAIRQSLEKFEWTGKLVDDVSEREAALVGGTR-KEPVRYRWDEGGFYAVLTARVKSYFLQKHGRAGVDPRNASVNRFVKAPPAWYLKELLILVVYLPLFACMLGY-NVCGTGLGEAL--SPPPL--------------WVRATAAVLAGGLLQSFSFCTLHDASHYGLLFKRPRVQEVVSRLCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPAEQYDPFLVKWQRFFAPAFMMVMPGASLGQTQAYLRGLREGNLWHVSITAASGGTRWYEYMTYAAVVGLHVVGGSVWVSFCYFMGISVAYHLCVAPDHDTLESSIVNSIEAKREGERQRA 469
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: D7G7E3_ECTSI (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E3_ECTSI) HSP 1 Score: 528 bits (1359), Expect = 1.670e-181 Identity = 262/330 (79.39%), Postives = 283/330 (85.76%), Query Frame = 3
Query: 888 MRGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVK-APRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPEDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAYLRGLREGNLWHVSITAASGDTRWYEYLTYVAAVGLHVLGGSVVVSF 1874
M+GAEDITPVFESYHALAHSAAIRQ+LEKFEW GKL+DDVSEREAALVGG KEP+RYRWDEGGFYAVL ARVK +FL+KHG G DPR+ASVNRFVK AP +WY KELLIL VY+PLF MLGY +F G G++L P PL W RA AAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQE +SR+CNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAP +QYDPFLV+WQRFFAP FMM+ PGA+LGQTQAYLRGLREGNLWHVSITAASG TRWYEY+TY AAVGLHV+GGSV +SF
Sbjct: 1 MKGAEDITPVFESYHALAHSAAIRQNLEKFEWTGKLMDDVSEREAALVGGTR-KEPVRYRWDEGGFYAVLIARVKAYFLQKHGRAGVDPRKASVNRFVKEAPPAWYFKELLILVVYLPLFTCMLGY-NVFATGLGEAL--PPPPL--------------WVRATAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEAVSRLCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPAEQYDPFLVKWQRFFAPAFMMVMPGASLGQTQAYLRGLREGNLWHVSITAASGGTRWYEYVTYAAAVGLHVVGGSVWISF 312
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A835YLX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX3_9STRA) HSP 1 Score: 341 bits (875), Expect = 9.970e-108 Identity = 175/378 (46.30%), Postives = 231/378 (61.11%), Query Frame = 3
Query: 891 RGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYN--------------GADP----RQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPEDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAYLRGLREGNLWHVSITAASGDTRWYEYLTYVAAVGLHVLGGSVVVSFCYFMGISMAYHLCVAPDHDTFESSIVNSIETK 1970
RG ED+T +FESYHAL++ AIR L+ + GK+ DD+ +EAA++ G + PL Y ++ GGFY VL ARVK HFL H A P ++ R+VKA +WY K +LAVY+PL+L+MLG + RG+G + AR AAA AGALLQ SFC LHDASHY L + QE LSR CNAWTLW+H +W++HHVYGHHSFTGDP RDPDL+HARP++RKS+L+P +Y + V WQ AP FM + PG +LGQT +Y RG +G++W V G RWYE+ Y +VG H+ G ++ VS+ Y MGI+ YHL +APDHDT+ES+++N+ K
Sbjct: 3 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVD-RNPLAYTYEPGGFYDVLKARVKAHFLGCHTRTPPASPLPWEEAPKAAAPPLTPGESVTITRYVKATPAWYAKMAALLAVYIPLYLAMLG-VDVLGRGAGLGV---------------------GARLAAAFAAGALLQCISFCALHDASHYALWRRAGAAQEALSRCCNAWTLWNHAMWMLHHVYGHHSFTGDPTRDPDLIHARPFIRKSLLSPLHEYFRWFVDWQHVVAPGFMCVIPGQSLGQTISYARGAAQGHVWRVPARDVRGGIRWYEWCVYALSVGSHLWGMNIFVSYAYLMGINTLYHLTIAPDHDTYESAVLNARHPK 357
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A0V0QTF1_PSEPJ (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QTF1_PSEPJ) HSP 1 Score: 195 bits (496), Expect = 8.140e-52 Identity = 118/382 (30.89%), Postives = 187/382 (48.95%), Query Frame = 3
Query: 792 KKASELWHIHGKHFDLTPFLGQHPGGSSILEAMRGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPEDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAYLRGLR-EGNLWHVSITAASGDTRWYEYLTYVAAVGLHVLGGSVVVSFCYFMGISMAYHLCVAPDHDT 1934
K++ +LWH++G +DL+ F+ +HPGG IL+ RG DITP+FESYHA A ++Q L ++ VGK + P +Y +++G FY V+ RV+ +F + +VN VK W+ K +I +Y+ A L+F + +L +S S G LL + C HDASH+ L + +V +R+ A+ L+ LW+ HH + HH++TGD DPD+++ +P++RK P +Y + + + M L PG +GQ Y R +G +W +S + R YE L +A V +H+ ++ V+ CYF+G +MAY L + PDHDT
Sbjct: 14 KQSKDLWHLYGNTYDLSSFMEKHPGGKQILQVTRGHLDITPMFESYHAFADLDKLKQDLATYQ-VGK-----------------SEYPQKYTFNKGEFYDVVRERVRKYF----------GTEKNVNHKVKINAFWFTKVSIITILYL---------ASLYFSFFTNYSTKLTCLISFIS--------------------GWLLIAVGMCVYHDASHFALFQRNFEKNDVFTRIVGAFLLFRPELWMTHHSFRHHAYTGDENLDPDIINYQPFIRKVDRVPAKKYMKYTNKILGLVTCITMWLLPGQGVGQALIYEFTWRIQGRIWRMSYPKEILNRRIYERLILIALVFMHLYKFNIFVTICYFIGYNMAYSLAIVPDHDT 338
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A5K0U7T4_9VIRU (Cytochrome b5-like heme/steroid binding domain n=1 Tax=Yasminevirus sp. GU-2018 TaxID=2420051 RepID=A0A5K0U7T4_9VIRU) HSP 1 Score: 191 bits (484), Expect = 6.330e-50 Identity = 118/386 (30.57%), Postives = 184/386 (47.67%), Query Frame = 3
Query: 786 ESKKASELWHIHGKHFDLTPFLGQHPGGSSILEAMRGAEDITPVFESYHALAHSAAIRQSLEKFEW-VGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEK-HGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPEDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAY-LRGLREGNLWHVSITAASGDTRWYEYLTYVAAVGLHVLGGSVVVSFCYFMGISMAYHLCVAPDHDT 1934
++ + LW IHGK++DLT F+ +HPGG ++LEA +G D TP+FESYH++ I+ + K+E V V + + G +Y ++ GFY+V+T RV+ HF + H YN W VK ++ + +YV F + + L F R +AV+AG ++ F +HDASH+ + + ++ +LSR N LW H LW+MHHV HHSFTGD DPD++H RP+++K+ Y + + RF + ++FPG +GQ Y L G +W + + + L V V V GGS+ V Y + +++ Y + + PDHDT
Sbjct: 2 QNPETKRLWKIHGKYYDLTDFMDKHPGGRTVLEACKGLIDSTPLFESYHSVCDMDKIKAIMPKYEVSVSTSVPTIFSMSDVISKSNQGP---KYTFNRDGFYSVVTNRVREHFNKNSHHYNSF----------------WLVKSIVQILMYVVAFTTAFWFTDLNFH----------------------------VRCISAVVAGLMVVGAGFGVMHDASHFAVA-RSDKINTLLSRTWNGIALWDHQLWLMHHVVRHHSFTGDDNWDPDVLHLRPFVQKTPYDKRSGYISTALNFPRFMTLLVSVVFPGLFVGQCVMYHLMWPLRGRIWRMEFPKYYRRSLYETLLNLVTCVSF-VYGGSLTVFLAYIVPLNILYFVGIFPDHDT 338
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A0G4FKE0_9ALVE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FKE0_9ALVE) HSP 1 Score: 164 bits (414), Expect = 1.240e-39 Identity = 139/450 (30.89%), Postives = 190/450 (42.22%), Query Frame = 3
Query: 807 LWHIHGKHFDLTPFLGQHPGGSSILEAMRGAEDITPVFESYHAL-----------------------------------------------AHSAA--IRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEP----------LRYRWD-EGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSF----SFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAPEDQYDPFL---VRWQRFFAPVFMMLFPGATLGQTQAYLRGLREGNLWHVSITAASGDTRWYEYLTYVAAVGLHVLGGSVVVSFCYFMGISMAYHLCVAPDHDTFESSIVN 1955
+W IHG+ FDLTPFL HPGG +L ED + +FESYHAL AHS+A R S + E + D E + A +E LR + + G Y L RV+ HF+++ G D R + KA W K +++Y LFL+ G R G L LP PL VL G F FC +HDASHY + K P V E+LSR+CNA W H +W HHVYGHHSFTGD +DPD + RP+ RK P+D FL + Q A + + +FPG GQ YL+ L + + + + D +E + + A + V S Y+ +++ Y +C+APDHDT+ES +N
Sbjct: 22 VWRIHGELFDLTPFLDHHPGGRDVLMTACNMEDASALFESYHALSNRRDVIWTQLQKFRLSSTYISQPPTQAVKRQPPITTAVDQSTTPSTAHSSARNSRSSADTAEHPTWMCDASDTTETKTILSASPQEEVSIPHSDTAKLREAFSPDSGLYRTLQTRVRAHFIDRAKAKGIDVRDSW-----KATSWWTFK----VSIYACLFLAAC-VTGFRQRWLG---LGLPFPL--------------------LVLIGFFQAVFHIACGFCVMHDASHYAVSSK-PWVNELLSRLCNASQSWFHHVWARHHVYGHHSFTGDVAKDPDTRYGRPFFRKH---PDDAEKKFLAVGLENQPASALIALAVFPGQFFGQGLLYLQALFKHRYIGIPVDVLN-DLFTFEVVVILLAQLQWWVFQPWVQSLAYWGSLNILYWMCIAPDHDTWESLSLN 433
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: L8H5B9_ACACA (Fatty acid desaturase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5B9_ACACA) HSP 1 Score: 157 bits (396), Expect = 9.190e-38 Identity = 117/397 (29.47%), Postives = 180/397 (45.34%), Query Frame = 3
Query: 798 ASELWHIHGKHFDLTPFLGQHPGGSSILEAMRGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKSILAP-EDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAYLRGLREGNLWHVSITAASGDTRWYEYLTYVAAVGLHVL--------GGSVVVSFCYFMGISMAYHLCVAPDHDTFESSIVNSI 1961
AS+LW IHG+++DL F+ HPGGS +L RG D T +FES HAL+ + L K++ GAP + W GFY+VL+ RV+ HF + G KA +++ K + A +V +L+++ YA S+ SL A +LAG ++ F +HD SHYG+ K P V VL + + W LW H LW+ HH YGHHS+TG RDPDLV+ + + RK +P + Q+ Q + V + P +GQ+ YLR ++ V + S YV ++ H++ ++ + Y+ G + Y L + P+HDT+E+ + S+
Sbjct: 26 ASKLWAIHGQYYDLASFIDSHPGGSEMLLLGRG-RDCTEMFESVHALS-KRNVHALLAKYK-------------VETPEGAPPPPVELFAWQPDGFYSVLSQRVRKHFEQTDGN-------------YKATTAYWFK---VTAFFVS-WLALISYA-----------------YSIGSLY-------------AGLLAGFVMNMIGFTVMHDGSHYGIS-KNPLVNRVLHTLWSDWNLWSHFLWLRHHTYGHHSYTGVYRRDPDLVNGQVFFRKHSESPFQAQHTQ-----QWWVTYVLLWFLPNQHVGQSLLYLRAWIVKTVFGVPLERISAIDLLASTAIYVPSLYFHLVLPFQLLPTSAALTMMALYWSGQGLGYALNIIPNHDTYETHSLVSV 354
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A6C0KGR0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KGR0_9ZZZZ) HSP 1 Score: 129 bits (324), Expect = 1.890e-28 Identity = 97/370 (26.22%), Postives = 166/370 (44.86%), Query Frame = 3
Query: 855 QHPGGSSILEAMRGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPDLVHARPYLRKS--ILAPEDQYDPFLVRWQRFFAPVFMMLFPGATLGQTQAY-LRGLREGNLWHVSITAASGDTRW--YEYLTYVAAVGLHVLGGSVVVSFCYFMGISMAYHLCVAPDHDTFESSI 1949
+HPGG+ IL+ D T +FESYHA + I+ +++K+E +R++ K ++ D GFY RV F K + +KA WY L + +++ M + LFF+ +++ M + +G L S + LHD SHYG+ + + +LSR+ LW+H LW HH HH +TGD E+DPD++++RP+LRKS I + ++ L+ F +F ++PG LGQT Y + + LW + + G W ++Y+ V + G ++ + + +G+++ Y + APDHD + + +
Sbjct: 16 KHPGGNEILKLCENENDCTALFESYHAFSDMKKIKMTMKKYE----------KRDSHT------KNEFSFKPD--GFYYTCKKRVNKLFTNK--------------KSIKANIEWYKTVLCSIFLFI-----MFQFFVLFFQ---TGIIKCIMSIG----------------------SGITLVSIGYNILHDGSHYGIS-QYVFINNILSRIIQGMCLWNHTLWSYHHCIRHHQYTGDIEKDPDMINSRPFLRKSKQIRPRKSEFTKILLS---FKTVLFNTIYPGTALGQTIMYHVYWINYRKLWKMDLPKHFGGL-WDIFQYIISFCFVIFELCYGGLLYFYLHLVGMNIGYFIGSAPDHDMYPNHL 318
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: D7FNC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNC9_ECTSI) HSP 1 Score: 101 bits (251), Expect = 1.590e-22 Identity = 49/57 (85.96%), Postives = 56/57 (98.25%), Query Frame = 3
Query: 69 MGQKIMRRRPRRESSPLLPKVMAVAKPILQWCIMPAVLLLGMRSEPNPTLLEVLYPL 239
MG+KIMRRRPRR+S+PLLPKV+AVAKPI++W IMPAVLL+GMRSEPNPTLLEVLYPL
Sbjct: 1 MGEKIMRRRPRRKSAPLLPKVLAVAKPIMRWGIMPAVLLMGMRSEPNPTLLEVLYPL 57
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Match: A0A6C0D075_9ZZZZ (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0D075_9ZZZZ) HSP 1 Score: 102 bits (254), Expect = 1.510e-19 Identity = 76/261 (29.12%), Postives = 111/261 (42.53%), Query Frame = 3
Query: 807 LWHIHGKHFDLTPFLGQHPGGSSILEAMRGAEDITPVFESYHALAHSAAIRQSLEKFEWVGKLVDDVSEREAALVGGAPGKEPLRYRWDEGGFYAVLTARVKIHFLEKHGYNGADPRQASVNRFVKAPRSWYVKELLILAVYVPLFLSMLGYAGLFFRGSGDSLLQLPMPLSLSSLPDSISVSSRWARAAAAVLAGALLQSFSFCTLHDASHYGLLFKRPRVQEVLSRVCNAWTLWHHGLWVMHHVYGHHSFTGDPERDPD 1589
+W I+G +DLT F+ HPGG ILE R D T +FESYHA + IRQSLEK+ K+ + ++E GK+ + + Y L R+K+ F ++ +K WY + YV + +L Y F W + + G L + F +HD+SHY F + V S + N+W LW+H +W HH++ HHSFTG+ DPD
Sbjct: 1 MWSIYGNTYDLTSFIPHHPGGKEILENTRNMGDCTALFESYHAFSDFPQIRQSLEKY----KIQNHLTE----------GKKDYCHDFTT---YHELVDRIKLVFPDRPS--------------IKPSSFWYTLVSGLGIAYVFILYHLLSYELYGF----------------------------WTTLYLSGVMGLLESTILFNIVHDSSHYAF-FLDSKKNNVASTLSNSWILWNHTVWFFHHIFYHHSFTGN-FIDPD 200 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.650.1 >prot_C-linearis_contig10.650.1 ID=prot_C-linearis_contig10.650.1|Name=mRNA_C-linearis_contig10.650.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=540bp MGSGQRRAPPQAPPQPCKAADPPCSKVVGGSSSSGTTTTNARGSGGNGRRback to top mRNA from alignment at C-linearis_contig10:3281609..3296217+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.650.1 ID=mRNA_C-linearis_contig10.650.1|Name=mRNA_C-linearis_contig10.650.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=14609bp|location=Sequence derived from alignment at C-linearis_contig10:3281609..3296217+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:3281609..3296217+ >mRNA_C-linearis_contig10.650.1 ID=mRNA_C-linearis_contig10.650.1|Name=mRNA_C-linearis_contig10.650.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3240bp|location=Sequence derived from alignment at C-linearis_contig10:3281609..3296217+ (Chordaria linearis ClinC8C monoicous)back to top |