mRNA_C-linearis_contig10.645.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: A0A6H5KT26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT26_9PHAE) HSP 1 Score: 1410 bits (3649), Expect = 0.000e+0 Identity = 1012/1919 (52.74%), Postives = 1127/1919 (58.73%), Query Frame = 2
Query: 482 MLPLEVVLTPPSGGRSAAAGGGRGEGVSRVTQGRGGGGRRGRGVPVGAREKAFGCMAEAVRGSGARFVEGYGIKPTIHVLIRLIFTLSECSPMAGGLLGQQPQSESSSGSAAPTAARRGEGD---SGLTAGTDALRLACLECLEV----------------------------------------------VLRAPFATEGYSNNCSSS-----SQSAWSEVRDGLKDAVGGGMLAQLVQELXXXXXXXXXXXXXXXXXXXTETGKRALANGGGDATPKTAEAGEGGRPRMWGGAEEARAAAGCLDALCSFAPGTTVWRRLLPGTFSGLFRAIRGIEVGSGLAGCGGDGAGGIGSDLALGGSPGGSRSITSGGVRDGRRGGGGSKSALAETCLGVLGKVLLMCAGGXXXXXXXXXXXS--GQSFGMD------SGSGRXXXXXXGMA---ETSNSNDADNPLIALQRLAVSSNASSRTAG-VAQDHTAGAAATASTASPTGRGQSEASLPKTAXXXXXXXXXXXXXXXX--------------VAVEDPEWDARTSDRLRLLLPPLLAFCCLHPGWRVRRATANLAADLLGAGCGGXXXXXXXXXAGGPVAESKSGGQSGLLKPLTALLVEALVGLLLDGMPQVYGAARRGLDGFRATLTPFRWLELRGVLLERLSTIAEGLPVLAKSADEKRLRAAFDLMAGYLALLRFDAQAALDGRLSTVLSCLCEALEFDEDFNVQVLEGSSASSXXXXXSTVDASSTHGRPQPTFPKYYRQVLANVREDSTLSSARRAARLLGKFCDISSLADVAISSLETRPPRXXXXXAPWRAPXXXSGT-----GSPAPMVAAASEGTSEPAFSRGGGSSGSSRNDAVYRRRCLKWLRLRLPLAWVLNQALLGRVPGLGSGGGVGDASVDAAAEAKAGPAAGFERQRQNGGGETAAAGAAEV------LFLGRGLAVSLLERLLASHAFALPVSRAEAVAAGYIGNYGNGEGAEV--------GAAG----GGATGSPPRALEYTRKGTVLGGXXXXXXARSRTSGVSGQVVLDANATLVSTVVEALGSLAEASGPDCGEAFLRRALYPLVEKAASTHPVVSQAALATLSRVRSACGDFDDMSQLLEANMDYVVDDVVRRVSXXXXXXXXXXNGSMSVSXXXXXXXXXXXXXXXXXXXVLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQARRSLGVLRAVASCVTLPPLSPAEHSEXXXXXXXXXXXXXXXXXXXXXXXKYRRNEGESEA--QGGGISAFAESPWFRQLFVEFADAPDIRRVEEASSAAGEGEGAPTLALLQAVKDHREAMGFDVLDGVREN----------ETDWNRARWRETEEEARKAAGQREIEXXXXXXXXXXXQGGQLPEPDAEGRRMAGSEEVKTLSEVLARSCHFLATPSLETQATALACMRDCVVKLASAGADAALLPHVHRAWRPLMASLREHLTPLPPAVVTGND--GSLVAATSLSSRRAVLLHALDTVDALVDVCGDFLSSKVAEDLWPLFKLLLLQYAASITVGGSNDTTLTSTARSKRQATHSTLFSS----PSSSXXXXXXXXXXEASPKGLFLVGSKLNGSANAFGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGESAAGWLGGSGRGXXXXXXSQGTLGEKVVARALESLARLCGSDECGRFMTPLAREVALTALPCLSSASPEPIRSRAEALFRRLSFLDGDGVWLLLMQTMDTAAHQP----------------NEQLQXXXXXXXXXLGAGTPTMAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVSDSGAWWGLPSVPA--PSIVLGTTSVGGVSSRRPAVLLEGRAVFGGSAGRVAGECAPAASRLLGVLSVDGVMAEHM 5821
MLPLE+ L PP G AGG + G G R VPVGAREKAF C+ EAVR SG+RFVEGYG+KPTIHV+IRL+FTLSECSP GG+L SSSGSA P A G G SGLTAGTDALRL+CL+CLEV VLRAPFA E + + + S WSEVR+ LKDA+GGG+LAQLVQELXXXXXXXXXXXXXXXXXXX R R+WGGAEEARAAAGCL+ALCSF PG++VWRRLLPGTFSGLFR IRGI+ G +AG + L S+ G DGRR G GSKSALAE CLG L KVLLMCAGG + G D +G G G ETSNS + NPL+ALQRLAV+SNAS+R G +AQ AG A+ A ASP G +S+ P XXXXXXXX +AVE+PEW+ARTSDRLRLLLPPLLAFCCLHPGWRVRRATA LA+DLL AG G +GG G+ GLL+PLT LL+EALVGLLLD MPQV ARRGLD FRATL+PFRWLELRG+LLERLSTI EGLP +AKSADEKRLR AFDL+AGYL+LLRFDA+ ALDGRLS VLSCLCE LEFDEDFNVQV ANVREDSTLSSARRA RLLGKFCD+ SLAD +ISSLETRPPR XXXX XXX +P VA AF GG S S ND +YRRRCLKWLRLRLPLAWVLNQALLGR GSG G+ + ++GGGE A AG + V +FL RGLA+S+LERLLASHAF +PVSRAEA AAGY G+YGN A+ GAAG GG R +EYTR G VLG RS + GVSGQV LDANATLVST+VEALGSLAEASGP CGEAFLRRALYPL+EKAASTHPVVSQ+ALATL+RVR ACGDF+D SQLLEANMDYVVDDVVRRVS GS ++ VLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQ R SLGVLRAVASCVTLPPL E + EG+S+ + G SA ESPWFRQLFVEFADA DI R EE SS AG+ + T L++AVK+HREAMG+DV D E E + +A+WRE EEEARKAAGQ E E +LPEPDAEGR+MA SEEVKTLSEVLARSCHFLATPSLETQA ALACMRDCV+KLASAGADAALLPHVHRAWRPLMASLREHLTPLP +V +G D A+ LSSRRAV+LH+LDTVDALVDVCGDFLSSKV+EDLWPL KLLLLQYAA T GG+ PS S ++P LFLVGSK +G N G G G G + SG+G + T+GEKVVAR LESL RLC S +C RFMTPLAREVA+ ALPCLSSA I SRAEALFRRL+FLDGDGVWLLLMQTMDTA Q N + GR S G LP P +++ ++VG + RRPA LLE R+VF G AGRVA ECAPAASRLLG+L G + EHM
Sbjct: 1 MLPLELALAPPDRGN---AGGSKTSGP---------GWRHSPEVPVGAREKAFLCVTEAVRASGSRFVEGYGVKPTIHVMIRLVFTLSECSPANGGVLAG-----SSSGSAVPGAVCNGTGGVRGSGLTAGTDALRLSCLKCLEVRVEGLLWCWRAVSPPPCYSSVLSSHQGCSFPFALLRVAIGGGSKWAVLRAPFACEWHHSXXXXXXXXXXNDSRWSEVRNDLKDAMGGGILAQLVQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------RSRVWGGAEEARAAAGCLEALCSFTPGSSVWRRLLPGTFSGLFRTIRGIDSGRDVAG-----------GMVL------PSSVAQRGG-DGRRRGSGSKSALAEVCLGTLAKVLLMCAGGDAAAVAAATRAATAGTCAARDPARVVKAGEGIDAAVQGGTGGEPETSNSTSS-NPLLALQRLAVTSNASARNPGNLAQP--AGTASAA--ASPEGHHRSDNLSPTPPCQPGAFAAXXXXXXXXXXXXXXXXXXXATVIAVENPEWEARTSDRLRLLLPPLLAFCCLHPGWRVRRATAKLASDLLRAGGDGNEAA-----SGGEAGRGSGEGKMGLLEPLTPLLMEALVGLLLDSMPQVSAEARRGLDSFRATLSPFRWLELRGILLERLSTIVEGLPAMAKSADEKRLRGAFDLLAGYLSLLRFDARTALDGRLSLVLSCLCETLEFDEDFNVQVF------------------------------------ANVREDSTLSSARRAVRLLGKFCDLPSLADASISSLETRPPRPXXXXXXXXXXXXXXXXXXXXXATPEIAVAIGPWSDRSSAFREDGGISSS--NDTIYRRRCLKWLRLRLPLAWVLNQALLGR----GSGSAAGEGAA------------------KDGGGEAAEAGKSNVTGEDEGIFLRRGLAISMLERLLASHAFNVPVSRAEAAAAGYSGSYGNDSAADFERESLLTSGAAGEGENGGVAALSRRPVEYTRSGQVLGAGGDGG-TRSPSRGVSGQV-LDANATLVSTIVEALGSLAEASGPGCGEAFLRRALYPLLEKAASTHPVVSQSALATLARVRVACGDFEDTSQLLEANMDYVVDDVVRRVSSSSRRSRNVDVGSTMITHGGRGGTSAGSGIPGVVEAVLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQTRCSLGVLRAVASCVTLPPLPAPGVDEKDTDG---------------------KEEGDSQGATERNGNSALVESPWFRQLFVEFADASDILRAEENSSGAGDRAQSATSGLVKAVKEHREAMGYDVPDDDSEEGRVESDTANPEYEKTKAKWREIEEEARKAAGQAEEESEGQQ---------ELPEPDAEGRKMAESEEVKTLSEVLARSCHFLATPSLETQALALACMRDCVLKLASAGADAALLPHVHRAWRPLMASLREHLTPLPSSVGSGGDHGDGHFEASPLSSRRAVVLHSLDTVDALVDVCGDFLSSKVSEDLWPLLKLLLLQYAAFKTPGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXPSQSI----------SAPGELFLVGSKTSGRTNDTGNGIHVDGDGSGLNSLLAVPPGGPVGGVHGGGGTNGPMTGSVASSGKGGRR---GRDTMGEKVVARTLESLERLCSSQQCERFMTPLAREVAIAALPCLSSAGATSILSRAEALFRRLAFLDGDGVWLLLMQTMDTATQQRCPQQXXXXXXXXYSRRNHHQHLQHCASVDGQRGDVTSDGGRGASGWVASPPTVAARLRSDAGGSSAGTGDAGCSSSQGGSGDGTSSRLPGCPTLEDTVLSELSAVGATTGRRPAALLERRSVFSGGAGRVAVECAPAASRLLGMLGDHGGVVEHM 1759
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: D7FND3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND3_ECTSI) HSP 1 Score: 1187 bits (3072), Expect = 0.000e+0 Identity = 831/1405 (59.15%), Postives = 926/1405 (65.91%), Query Frame = 2
Query: 482 MLPLEVVLTPPSGGRSAAAGGGRGEGVSRVTQGRGGGGRRGRGVPVGAREKAFGCMAEAVRGSGARFVEGYGIKPTIHVLIRLIFTLSECSPMAGGLLGQQPQSESSSGSAAPTAARRGEGD---SGLTAGTDALRLACLECLEVVLRAPFATEGYSNNCSSSSQSAWSEVRDGLKDAVGGGMLAQLVQELXXXXXXXXXXXXXXXXXXXTETGKRALANGGGDATPKTAEAGEGGRPRMWGGAEEARAAAGCLDALCSFAPGTTVWRRLLPGTFSGLFRAIRGIEVGSGLAGCGGDGAGGI---GSDLALGGSPGGSRSITSGGVRDGRRGGGGSKSALAETCLGVLGKVLLMCAGGXXXXXXXXXXXSGQSFGMDSGSGRXXXXXXGMAETSNSNDADNPLIALQRLAVSSNASSRTAGVAQDHTAGAAATASTASPTGRGQSEAS------------LPKTAXXXXXXXXXXXXXXXXVAVEDPEWDARTSDRLRLLLPPLLAFCCLHPGWRVRRATANLAADLLGAGCGGXXXXXXXXXAGGPVAESKSGGQSGLLKPLTALLVEALVGLLLDGMPQVYGAARRGLDGFRATLTPFRWLELRGVLLERLSTIAEGLPVLAKSADEKRLRAAFDLMAGYLALLRFDAQAALDGRLSTVLSCLCEALEFDEDFNVQVLEGSSASSXXXXXS-TVDASST--HGRPQ---PTFPKYYRQVLANVREDSTLSSARRAARLLGKFCDISSLADVAISSLETRPPRXXXXXAPWRAPXXXSGTGSPA---PMVAAASEGTSE--PAFSRGGGSSGSSRNDAVYRRRCLKWLRLRLPLAWVLNQALLGRVPGLGSGGGVGDASVDAAAEAKAGPAAGFERQRQNGGGETAAAGAAEVLFLGRGLAVSLLERLLASHAFALPVSRAEAVAAGYIGNYGNGEGAEV--------GA-AGGGATGSPP----RALEYTRKGTVLGGXXXXXXARSRTSGVSGQVVLDANATLVSTVVEALGSLAEASGPDCGEAFLRRALYPLVEKAASTHPVVSQAALATLSRVRSACGDFDDMSQLLEANMDYVVDDVVRRVSXXXXXXXXXXNGSMSVSXXXXXXXXXXXXXXXXXXXVLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQARRSLGVLRAVASCVTLPPLSPAEHSEXXXXXXXXXXXXXXXXXXXXXXXKYRRNEGESEAQG----GGISAFAESPWFRQLFVEFADAPDIRRVEEASSAAGEGEGAPTLALLQAVKDHREAMGFDVLDGVREN----------ETDWNRARWRETEEEARKAAGQREIEXXXXXXXXXXXQGGQLPEPDAEGRRMAGSEEVKTLSEVLARSCHFLATPSLETQATALACMRDCVVKLASAGADA 4528
MLPLE+ L PP R A G R T G GGG + VP GAREKAF C+AEAVR SG+RFVEGYG+KPTIHV+IRL+FTLS CSP +GG+ + SSSGSA P A R G G SGLTAGTDALRL+CL+CLE VLRAPFA + + ++ S S+ S WSEVR+ LKDA+GGG+LAQLVQELXXXXXXXXXXXXXXXXXXX A + G G + GR R+WGGAEEARAAAGCL+ALCSF PG+ VWRRLLPGTFSGLFR IRGI G D AGG+ S LGG DGRR G GSKSALAE G+ + SG+G G ++ +S D+D PL+ALQRLAV+SNAS+R G A+A AS GR XXXXXXXXXXXXXX +AVE+PEW+ARTSDRLRLLLPPLLAFCCLHPGWRVRRATA LA+DLL AG GG +GG G+ GLL+PLT LL+EALVGLLLD MPQV ARRGLD FRATL+PFRWLELRG+LLERL TIAEGLP +AKSADEKRLR AFDL+AGYL+LLRFDA+AALDGRLS VLSCLCE LEFDEDFNVQ LEGSSASS S + S T G P+ P PKYYRQV ANVREDSTLSSARRA RLLGKFCD+ SLAD +ISSLETR PR XXX XXX PA P A A S+ AF GG+S S NDA+YRRRCLKWLRLRLPLAWVLNQALLGR G G A+ + A G G E ++ N GE E +FLGRGLA+S+LERLLASH F LPVSRAEA AAGY G+YGN A+ GA AG G G R++EYTR G VLG ARSR+ GVSGQV LDANATLVSTVVEALGSLAEASGP CGEAFLRRALYPL+EKAASTHPVVSQ+ALATL+RVR ACGDF+D SQLLEANMDYVVDDVVRRVS GS ++ VLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQ RRSLGVLRAVASCVTLPPL P E+SE + ++ E + QG G SA AESPWFRQLFVEFADA D+ RVEE SS G+ A T L++AVK+HREAMG+DV D E E + +A+WRE EEEARKAAGQ E E +LPEPDAEGR++A SEEVKTLSEVLARSCH+LATPSLETQA ALACMRDCV+KLASAGADA
Sbjct: 1 MLPLELALAPPD--RRNAGG--------RKTSGLGGG--QSPEVPAGAREKAFLCVAEAVRASGSRFVEGYGVKPTIHVMIRLVFTLSGCSPASGGV-----PAGSSSGSAVPGAVRNGTGGVGGSGLTAGTDALRLSCLKCLEAVLRAPFACDWHHSSSSGSNDSLWSEVRNDLKDAMGGGILAQLVQELXXXXXXXXXXXXXXXXXXXXXXRAVAASPGSGGS----------GRDRVWGGAEEARAAAGCLEALCSFTPGSAVWRRLLPGTFSGLFRTIRGIHSGR-------DVAGGMVLPSSAAQLGG--------------DGRRRGSGSKSALAEAGDGI-------------------------DEAVQSGTG-------GQPQSRSSTDSD-PLLALQRLAVTSNASARNPGNPAQPAGTASAAASPEGHHGRASPSPDPXXXXGAFAXXXXXXXXXXXXXXXXXXXXXXTVIAVENPEWEARTSDRLRLLLPPLLAFCCLHPGWRVRRATAKLASDLLRAGGGGHEAA-----SGGEAGRGSGEGKGGLLEPLTPLLMEALVGLLLDSMPQVSAEARRGLDSFRATLSPFRWLELRGILLERLCTIAEGLPAMAKSADEKRLRGAFDLLAGYLSLLRFDARAALDGRLSLVLSCLCETLEFDEDFNVQALEGSSASSSGNLSSENISPSDTAQDGGPEACRPNRPKYYRQVFANVREDSTLSSARRAVRLLGKFCDLPSLADASISSLETRSPRPPXXXXXXXXXXXXXXXXXPAAATPETAVAIGPWSDRSSAFREDGGNSSS--NDAIYRRRCLKWLRLRLPLAWVLNQALLGR--------GSGSAAGEEAXXXXGGE--GAEARKSNVTGED------EGMFLGRGLAISMLERLLASHTFNLPVSRAEAAAAGYSGSYGNVGAADFERESLLTSGANAGEGERGDVAALARRSVEYTRSGQVLG-VGGDGGARSRSRGVSGQV-LDANATLVSTVVEALGSLAEASGPGCGEAFLRRALYPLLEKAASTHPVVSQSALATLARVRVACGDFEDTSQLLEANMDYVVDDVVRRVSSSSRRSRNMDGGSTMITGGGRGGTSAGSGIPGVVEAVLRIGGSAMGPALVRDLAGVTLREVDACAWDPRQTRRSLGVLRAVASCVTLPPLPPPENSEKFPNSGVDQHD--------------KDDKEEEDLQGTTERNGESALAESPWFRQLFVEFADASDVLRVEENSSGVGDKAKAATNGLVKAVKEHREAMGYDVTDDDSEEGRVESDTANTEYERTKAKWREIEEEARKAAGQAEEESDGQQ---------ELPEPDAEGRKIAESEEVKTLSEVLARSCHYLATPSLETQALALACMRDCVLKLASAGADA 1276
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: A0A835Z555_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z555_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.160e-27 Identity = 114/335 (34.03%), Postives = 156/335 (46.57%), Query Frame = 2
Query: 4388 SEEVKTLSEVLARSCHFLATPSLETQATALACMRDCVVKLASAGADAALLPHVHRAWRPLMASLREHLTPLPPAVVTGNDGSLVAAT--SLSSRRAVLLHALDTVDALVDVCGDFLSSKVAEDLWPLFKLLLLQYAASITVGGSNDTTLTSTARSKRQATHSTLFSSPSSSXXXXXXXXXXEASPKGLF-LVGSKLNGSANAFGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGESAAGWLGGSGRGXXXXXXSQGTLGEKVVARALESLARLCGSDECGRFMTPLAREVALTALPCLSSASPEPIRSRAEALFRRLSFLDGDGVWLLLMQ 5383
S EV L E+L R+ +F ATP L QA A A + DC+ KLA+ D LLP VHRAW LMA RE A+ +G G++ AA ++ RRA LL V AL D+CGDFLS KV E+LWP+ + LL + + L + +++XXXXXXXXXX + F L+GS+ GS G +A + ++ KV LE L L + +C R+M PLA++VA LP LS+ +P +R+ LFR L LDGDG+W++L+Q
Sbjct: 928 SAEVAVLREILERAQYFAATPRLRCQALAAAAVGDCLAKLAATRVDTVLLPAVHRAWPSLMARFREQARAAGAALGSGGKGAVEAAEMEGVAQRRAALLSVARAVAALTDLCGDFLSLKVTEELWPVLRALLARRLPVL------------------------LKAPAAAAXXXXXXXXXXXXXXRDAFGLLGSQYGGSG-----------------VLSVTDIAGAARALELGASAGTAALIASNTDAHDRERRAAADQSMDVKVAVALLECLTALARTRDCRRYMAPLAQDVAAVTLPGLSARAPVTLRAATIELFRALMALDGDGLWVILLQ 1221
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: A0A4D9D7J6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7J6_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.180e-17 Identity = 139/503 (27.63%), Postives = 193/503 (38.37%), Query Frame = 2
Query: 3434 EAFLRRALYPLVEKAASTHPVVSQAALATLSRVRSAC-----------------------------GDFDDMSQLLEANMDYVVDDV---VRRVSXXXXXXXXXXNGSMSVSXXXXXXXXXXXXXXXXXXXVLRIGGSAMGPALVRDLAGVTLREVD--ACAWDPRQARRSLGVLRAVASCVTLPPLSPAEHSEXXXXXXXXXXXXXXXXXXXXXXXKYRRNEGESEAQGGGISAFAESPWFRQLFVEFADAPDIRRVEEASSAAGEGEGAPTLALLQAVKDHREAMGFDVLDGVRENETDWNRARWRETEE-------------EARKAAGQREIEXXXXXXXXXXXQGGQLPEPDAEGRRMAGSEEVKTLSEVLARSCHFLATPSLETQATALACMRDCVVKLASAGADAALLPHVHRAWRPLMASLREHLTPL--PPAVVTGNDGSLVAATSLSSRRAVLLHALDTVDALVDVCGDFLSSKVAEDLWPLFKLLLLQYAAS 4795
E FL L+PLVEK HPVV QAAL TL R+ A G+ + +LL AN+DY+V+ + VR+ G +S V GG A AL+R+LA V L VD R A + VLRA+ V LP P R N + + A A W ++ EF SS G+G G P Q + F V+ E +A+ ETEE EA K A ++E +G ++ E D + E + E++ R C+FLA PSL Q +LA +R+ + +L+S LLP VHR W +MA LR + + P + G D + LS+ +++ ALD V L +CGD+LS K E+LWP+ K+LLL A S
Sbjct: 988 ERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQEALVGQSAKERKRKEADTNVSRAGSRLQEGEVGVVGRLLAANLDYLVEALCAHVRKSQGRTSRIGSQGGGRLSFPLAPSVLEAL----------VAYAGGQA-SLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSQDGEGAGVALEGGEGGR-----------RENRARKAPKVSRVPAAAY--WKAKILAEFE-----------SSKEGDG-GNPEGESAQHASETNPEAYFKAYHQVQAAE---RKAQRHETEEPMEEKLEIEKLFPEAAKGAKEKET---WEGGSGEEEEGEEMDEDDKP------TSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSR--RLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDM---DLSAAYLLVVEALDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASATS 1437
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: W7TRQ1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRQ1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.800e-14 Identity = 183/752 (24.34%), Postives = 254/752 (33.78%), Query Frame = 2
Query: 3350 VLDANATLVSTVVEALGSLAEA---------------------SGPDCG---------EAFLRRALYPLVEKAASTHPVVSQAALATLSRVRSAC-----------------------------GDFDDMSQLLEANMDYVVDDVVRRVSXXXXXXXXXXNGSMSVSXXXXXXXXXXXXXXXXXXXVLRIGGSAMGPALVRDLAGVTLREVD--ACAWDPRQARRSLGVLRAVASCVTLPPLSPAEHSEXXXXXXXXXXXXXXXXXXXXXXXKYRRNEGESEAQGGGISAFAESPWFRQLFVEFADAPDIRRVEEASSAAGEGEGAPTLALLQAVKDHREAM------GFDVLDGVRENETDWNRARWRETEE---EARKAAGQREIEXXXXXXXXXXXQGGQLPEPDAEGRRMAGSEEVKTLSEVLARSCHFLATPSLETQATALACMRDCVVKLASAGADAALLPHVHRAWRPLMASLREHLTPL--PPAVVTGNDGSLVAATSLSSRRAVLLHALDTVDALVDVCGDFLSSKVAEDLWPLFKLLLLQYAASI---TVGGSNDTTLTSTARSKRQATHSTLFSSPSSSXXXXXXXXXXEASPKGLFLVGSKLNGSANAFGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGESAAGWLGGSGRGXXXXXXSQGTLGEKVVARALESLARLCGSDECGRFMTPLAREVALTALPCLSSASPEPIRSRAEALFRRLSFLDGDGVWLLLM 5380
VL+ NA LV+ +VE +G EA SG G E FL L+PLVEK HPVV QAAL TL R+ A G+ + +LL AN+DY+V+ + V G S S ++ G AL+R+LA V L VD R A + VLRA+ V LP P R N + + + A A W ++ EF SS G+G + A + + EA E E+ EA K A ++E XXX +P + E + E++ R C+FLA PSL Q +LA +R+ + +L+S LLP VHR W +MA LR + + P + G D + LS+ +++ LD V L +CGD+LS K E+LWP+ K+LLL A S GG R R A ++ SS + P L + N GG G E + TL + A + L S++ R+ PL E+ + L L A P A LFR L+ LDG +W LLM
Sbjct: 153 VLELNARLVALLVEGVGDCGEALYAQLVFLQERRRRTQGAGENSGTGAGTGGRWMRAWERFLMLCLFPLVEKLGDPHPVVQQAALTTLYRLARAQETLVGQSAKERKGKEADTNVSRAGSRPQEGEEGVVGRLLAANLDYLVEALCAHVRKS--------QGRTSRSGSQEGGRLSFPLAPSVLEALVAYAGGQASLALIRELARVVLEVVDMEGLRCGHRYAYEMMRVLRAMGQAVPLPGDGPRSKDGEGAGVALEGGEGGR-----------RENRAKKVPKVSRVPAAAY--WKAKILAEFE-----------SSEEGDGGNPGGESAQHASETNPEAYFXXXXXXXXXXXXXXXXXXXXXXXXXLEIEKLFPEATKGAKEKETWEGGSGEEEXXXXXXXXXKP---------TSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSR--RLVLLPTVHRVWPAVMARLRACASSIGGPRSRRPGQDEKDM---DLSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPR------AIRVSRMAGDASTASSSHVPALGQKGLVLPKQCPDQTALAETD-NDRRGQLGG-------------------EPLWDGLNLHQGYRER-----------------ERQTLQHRAEAALVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLGCAPNSPSAGDALILFRALASLDGAALWPLLM 815
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: W4GHP7_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHP7_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.820e-6 Identity = 60/170 (35.29%), Postives = 80/170 (47.06%), Query Frame = 2
Query: 3374 VSTVVEALGSLAEASGPDCGEAFLRRALYPLVEKAASTHPVVSQAALATLSRVRSACGDFDDMSQLLEANMDYVVDDVVRRVSXXXXXXXXXXNGSMSVSXXXXXXXXXXXXXXXXXXXVLRIGGSAMG----PALVRDLAGVTLREVDACAWDPRQARRSLGVLRAVAS 3871
+S V+E +GS+A+A G L LYPLVE+ PVV QAALATL R+ C D +S LL+ANMDYVVD +V R++ +LR GGS++ P L +AGV +R VD P+ A L V++ V S
Sbjct: 574 LSVVLEIVGSIAQALGV-AFRPLLMHVLYPLVEQLGRPSPVVQQAALATLERIAFFC-DSQSVSALLQANMDYVVDMLVSRLTQLDEYPHTPF----------------------VVQGLLRHGGSSVTSPPLPLLEEAVAGV-IRSVDFHVATPQHALGLLRVMKVVVS 718
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Match: A0A3R7DAR9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DAR9_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.100e-6 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 2
Query: 3374 VSTVVEALGSLAEASGPDCGEAFLRRALYPLVEKAASTHPVVSQAALATLSRVRSACGDFDDMSQLLEANMDYVVDDVVRRVS 3622
+S V+E +GS+A+A G L LYPLVE+ PVV QAALATL R+ C D +S LL+ANMDYVVD +V R++
Sbjct: 512 LSVVLEIVGSIAQALGV-AFRPLLMHVLYPLVEQLGRPSPVVQQAALATLERIAFFC-DSQSVSALLQANMDYVVDMLVSRLT 592 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.645.1 >prot_C-linearis_contig10.645.1 ID=prot_C-linearis_contig10.645.1|Name=mRNA_C-linearis_contig10.645.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1914bp MELGRAPFPGVAPRPGVSPESEALLNVLRPHCMAAVMAMEDLLSSAGNPAback to top mRNA from alignment at C-linearis_contig10:3253037..3268264+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.645.1 ID=mRNA_C-linearis_contig10.645.1|Name=mRNA_C-linearis_contig10.645.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15228bp|location=Sequence derived from alignment at C-linearis_contig10:3253037..3268264+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:3253037..3268264+ >mRNA_C-linearis_contig10.645.1 ID=mRNA_C-linearis_contig10.645.1|Name=mRNA_C-linearis_contig10.645.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=11484bp|location=Sequence derived from alignment at C-linearis_contig10:3253037..3268264+ (Chordaria linearis ClinC8C monoicous)back to top |