mRNA_C-linearis_contig10.625.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: D7G8S8_ECTSI (Acetyl-CoA acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S8_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 2.210e-171 Identity = 262/309 (84.79%), Postives = 279/309 (90.29%), Query Frame = 2 Query: 779 DAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
DAVIVS ART +G G +SAL GP+LGAI REAVAR GL+ VEEVFMGNVVSAGAGQAPARQAA++AGLPESVPCTTINKVCASGMKSVMLAAQS+SL HRGVMVAGGFESMSNVPYYLP+AR GLRLGNGT+VDGI+HDGLWDVYNDHHMGICAEKCS YGI REAQD+HATESY+RAALAW+KG+FDEET PVEI SRRGSPT I+KDEEYTNIDLGKL LRPAF+RE GTVTAANASSLNDGAAALVLMS ARAEELG KPLARI GYGDAARAPVEFT+APSDAVPVALKNA ISL D
Sbjct: 33 DAVIVSMARTPIGNLGGGISALWGPKLGAIPFREAVARAEGLQPALVEEVFMGNVVSAGAGQAPARQAAIYAGLPESVPCTTINKVCASGMKSVMLAAQSLSLGHRGVMVAGGFESMSNVPYYLPQARGGLRLGNGTVVDGIIHDGLWDVYNDHHMGICAEKCSSAYGISREAQDEHATESYQRAALAWEKGRFDEETTPVEISSRRGSPTTITKDEEYTNIDLGKLKGLRPAFEREEGTVTAANASSLNDGAAALVLMSTARAEELGVKPLARILGYGDAARAPVEFTIAPSDAVPVALKNAAISLGD 341
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A485LQ82_9STRA (Aste57867_24360 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LQ82_9STRA) HSP 1 Score: 380 bits (977), Expect = 3.550e-121 Identity = 193/312 (61.86%), Postives = 246/312 (78.85%), Query Frame = 2 Query: 770 SCKDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
S +D VIVS ART + FNG+ ++L+GP+LGAIA + A+ R G+ + ++E ++GNVVSA GQAPARQA L AG+P++VPCTTINKVCASGMK+V LAAQS+ + +++AGGFESMSN+PYYLPKAR+G RLG+G LVDG++HDGLWD YN+ HMG C EKC+ +G RE QDK+A ESY RAA A G+F E VPV IPSR+G PTI+S+D+E N+ L K+ SLRPAF+++G TVTAANAS LNDGAAALV+M+ +A+ LG KPLARIRG+GDAA PV+FT AP+ AVP+A K+A +SL D
Sbjct: 17 SPRDVVIVSYARTPIATFNGAFASLTGPELGAIANKAAIERA-GISVNDIQEAYLGNVVSAAIGQAPARQAVLKAGIPDTVPCTTINKVCASGMKAVALAAQSIMAGSQDIILAGGFESMSNIPYYLPKARSGYRLGDGKLVDGVIHDGLWDPYNNQHMGNCGEKCADEFGFTREDQDKYAIESYTRAANAAKAGRFAAEIVPVSIPSRKGDPTIVSQDDEVYNVKLDKIPSLRPAFKKDG-TVTAANASPLNDGAAALVVMAYEKAQALGLKPLARIRGFGDAAHKPVDFTTAPAKAVPIAAKHAKLSLTD 326
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A067BWM4_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BWM4_SAPPC) HSP 1 Score: 379 bits (974), Expect = 9.910e-121 Identity = 188/315 (59.68%), Postives = 242/315 (76.83%), Query Frame = 2 Query: 761 HFCSCKDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
H S +D VIVS ART + FNG++S+L+GP+LGAI + A+ R G+ + ++E ++GNVVSAG GQAPARQ+ L AG+P+SVPCTT+NKVCASGMK++ +A+Q++ + +M+AGGFESMSN+PYYLPKAR+G RLG+G LVDG++HDGLWD YN+ HMG+C EKC+ +G RE QD A SY RAA A GKF+ E VPV I ++G P I+S D+E N+ L K+ +LRPAF+++G TVTAANAS LNDGAAALV+MS RA LG KPLARIRG+GDAA PV+FT APS AVP+A K+AG+ L D
Sbjct: 14 HAASPRDVVIVSYARTPIATFNGALSSLTGPELGAIVNKAAIERA-GISVNDIQEAYLGNVVSAGIGQAPARQSVLKAGIPDSVPCTTVNKVCASGMKAIAMASQAIMAGSQDIMLAGGFESMSNIPYYLPKARSGYRLGDGKLVDGVIHDGLWDPYNNQHMGMCGEKCATDFGFSREDQDNFAIASYTRAAAAAKAGKFEAEIVPVSIKQKKGDPKIVSADDEIYNVKLDKIPTLRPAFKKDG-TVTAANASPLNDGAAALVVMSRERANALGLKPLARIRGFGDAAHKPVDFTTAPSKAVPIAAKHAGLQLSD 326
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A7Z9GG93_9FLAO (Acetyl-CoA C-acyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7Z9GG93_9FLAO) HSP 1 Score: 375 bits (963), Expect = 2.430e-119 Identity = 194/310 (62.58%), Postives = 237/310 (76.45%), Query Frame = 2 Query: 776 KDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
K+ VIVS RT +G F G +S LS QLGA AI+ A+A+ G++ V+EVFMGNV+ AG GQAPARQA+++AGL + VPCTT+NKVCASGMKS+ML AQS++L V+VAGG ESMSNVPYYL KARTG RLG+G + DG+VHDGL DVYN++HMG AE C+ I RE QD A ESYER+A AW +GKF++E VPVE+P RRG P +S+DEEY N DL K+ L+P FQ+EG TVTAANAS+LNDGAAALVLMS +AE LG LA IRGY D A+AP FT APSDA+P A++ AGI++ D
Sbjct: 2 KEVVIVSAVRTPIGSFGGVLSPLSATQLGATAIKGALAKA-GMDASEVQEVFMGNVLQAGIGQAPARQASIYAGLGDQVPCTTVNKVCASGMKSIMLGAQSIALGQNAVVVAGGMESMSNVPYYLSKARTGYRLGDGKIQDGLVHDGLTDVYNEYHMGNAAELCAKECNISREEQDAFAIESYERSARAWSEGKFNDEIVPVEVPQRRGDPVTVSEDEEYKNSDLKKIPQLKPVFQKEG-TVTAANASTLNDGAAALVLMSREKAEALGCTVLATIRGYADTAKAPEWFTTAPSDALPKAVERAGIAMND 309
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A2D4CFX5_PYTIN (Acetyl-CoA acetyltransferase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFX5_PYTIN) HSP 1 Score: 376 bits (965), Expect = 2.630e-119 Identity = 198/310 (63.87%), Postives = 237/310 (76.45%), Query Frame = 2 Query: 776 KDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
+DAVIVS ART + FNGS + LSGP+LGAIA + AV R GLE ++EV+MGNVVSAG GQAPARQ+ L AG P +PCTT+NKVCASGMKSV +AAQS+ + +M+AGGFESMSNVPYYLPKARTG RLG+G LVDG+VHDGLWD YN+ HMG+C E C+ + G RE QD A ESY RA A ++G F +E PV I RRG P +KDEE K+ SLRPAF+++G TVTAANAS LNDGAAALV+MS ARA+ LG KPLA+IRG+GDAA+ PVEFT+APS AVP+AL +AG+ L D
Sbjct: 24 RDAVIVSYARTPIATFNGSFAGLSGPELGAIANKAAVERA-GLEPGQIQEVYMGNVVSAGIGQAPARQSILKAGFPNHIPCTTVNKVCASGMKSVAMAAQSIMAGSQDIMLAGGFESMSNVPYYLPKARTGYRLGDGKLVDGVVHDGLWDPYNNQHMGMCGEHCADSLGFTREDQDAFAIESYNRALKANERGFFAKEITPVTIKPRRGDPVTYAKDEEPFQTKPEKIPSLRPAFKKDG-TVTAANASPLNDGAAALVIMSGARAQALGLKPLAKIRGFGDAAQDPVEFTIAPSKAVPIALHHAGLQLSD 331
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A024U0R7_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U0R7_9STRA) HSP 1 Score: 375 bits (962), Expect = 9.520e-119 Identity = 190/312 (60.90%), Postives = 243/312 (77.88%), Query Frame = 2 Query: 770 SCKDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
S +D VIVS ART + FNG+ ++L+ P+LGAIA + A+ R G+ ++ ++E ++GNVVSA GQAPARQ+ L AG+P+SVPCTTINKVCASGMKSV +AAQS+ + M+AGGFESMSN+PYYLPKARTG RLG+G LVDG++HDGLWD YN+ HMG+C EKC+ YGI RE QDK+A ESY RAA A GKF E PV I R+G P +++ DEE N+ + K+ SLR AF+++G TVTAANASSLNDGAA+LVLMSA +A+ LG KPLARI G+GDAA PV+FT AP+ AVP+A K+A ++++D
Sbjct: 31 SPRDVVIVSYARTPIATFNGAFASLTAPELGAIANKAAIERA-GISVDEIQEAYLGNVVSAAIGQAPARQSVLKAGIPDSVPCTTINKVCASGMKSVAMAAQSILAGSQDAMLAGGFESMSNIPYYLPKARTGYRLGDGKLVDGVIHDGLWDPYNNQHMGLCGEKCAEEYGITREDQDKYAIESYTRAANAAKAGKFAAEITPVTIAQRKGDPKVVTDDEEIYNVKVDKIPSLRAAFKKDG-TVTAANASSLNDGAASLVLMSAEKAKSLGLKPLARILGFGDAAHKPVDFTTAPAKAVPIAAKHAKLNVKD 340
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A7S1CPK7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPK7_9STRA) HSP 1 Score: 371 bits (953), Expect = 6.300e-118 Identity = 193/306 (63.07%), Postives = 236/306 (77.12%), Query Frame = 2 Query: 806 TAVGKFNGSMSALSGPQLGAIAIREAVARVPGL------ELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
T +G GS+S+L+ PQLG+ AIR A+ R GL + VEEVF GNVVSAG GQAPARQA L AGLP SVPCTTINKVCASGMK++M+AAQ++S HR VMVAGG ESMSN+PYYLP R G R G+G ++DGIVHDGLWDVYND HMG+CAEKC+ YGI REAQD +A +SY+RAA AW+ G F +E V +P RRG ++ +DEE+ I+ K+ L PAF++ GG+VTAANASSLNDGAAA+VLMSAARA ELGA PLARI G+GDAA+AP +FT AP+ A+P+AL +AG++ D
Sbjct: 1 TPIGSIGGSLSSLTAPQLGSAAIRAALERA-GLPNDADKDANKVEEVFFGNVVSAGIGQAPARQATLGAGLPLSVPCTTINKVCASGMKAIMMAAQAISTGHRDVMVAGGMESMSNIPYYLPGGRNGHRYGHGKVLDGIVHDGLWDVYNDQHMGMCAEKCAADYGISREAQDAYAIDSYKRAAAAWEAGLFADEVCAVSVPQRRGDALVVDRDEEFARINYDKVGKLAPAFKK-GGSVTAANASSLNDGAAAMVLMSAARAAELGATPLARIVGFGDAAQAPEDFTTAPALALPLALADAGMAAGD 304
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A7S4VFA4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VFA4_9STRA) HSP 1 Score: 370 bits (950), Expect = 2.620e-117 Identity = 195/309 (63.11%), Postives = 239/309 (77.35%), Query Frame = 2 Query: 782 AVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRG-VMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
AVIVS ART V KF GS+S+LS PQLGA AIR A++R+ +++ + E +MGNVVSAG GQAP RQA L AGLP++ CTTINKVCASGMKSV+LA+Q++ L G ++AGG ESMSN+P+YLP +RTG LG+ L+DG++HDGLWDVYND HMG+CAEKC+ Y I RE QD +A ESY R+ A + G F+ E V++P RRG PTIIS DEE ++ L K+++LRPAFQRE GTVTAANASSLNDGAAA+VLMS A + KPLARIRGYGDA + PV+FT APS AVPVAL+NAG+ L D
Sbjct: 8 AVIVSYARTPVAKFCGSLSSLSAPQLGATAIRGALSRLGNGDIQ-ISEAYMGNVVSAGIGQAPCRQAVLGAGLPQNTVCTTINKVCASGMKSVVLASQTIQLGGGGGALLAGGMESMSNIPHYLPSSRTGTTLGHTKLLDGVIHDGLWDVYNDQHMGMCAEKCASDYSISREEQDNYAIESYRRSQEAIEAGAFESEIESVQVPQRRGDPTIISTDEEPFSVKLDKVSTLRPAFQRENGTVTAANASSLNDGAAAMVLMSEQDALDRNLKPLARIRGYGDAEQDPVDFTTAPSLAVPVALRNAGMDLSD 315
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: K3WL71_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL71_GLOUD) HSP 1 Score: 370 bits (951), Expect = 2.950e-117 Identity = 195/336 (58.04%), Postives = 246/336 (73.21%), Query Frame = 2 Query: 704 HINLFLSSL--SFSPLGLPRIHFCSCKDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
H + S+L SFS PR D VIVS ART + FNGS ++LSGP+LGAIA + AV R GL+ ++E ++GNVVSAG GQAPARQ+ L AG P +PCTT+NKVCASGMK++ +A+QS+ + +M+AGGFESMSNVPYYLPKARTG RLG+G LVDG++HDGLWD YN+ HMG+C EKC+ +G RE QD + ESY RA A ++G F+ E PV + RRG P + +KDEE N K+ SLRPAF+++G TVTAANA+ LNDGAAALV+MS +A+ELG PLARIRG+ DAA+ PVEFT+APS AVP+AL +AG+ L D
Sbjct: 3 HASALKSALKRSFSTKVAPR-------DVVIVSYARTPIMPFNGSFASLSGPELGAIANKAAVERA-GLQPNQIQEAYLGNVVSAGIGQAPARQSILKAGFPNFIPCTTVNKVCASGMKAIAMASQSILAGSQDIMLAGGFESMSNVPYYLPKARTGYRLGDGKLVDGVIHDGLWDPYNNQHMGLCGEKCAEDFGFSREDQDAYTIESYNRAIQANERGFFESEITPVSVKQRRGDPLVFTKDEEPFNTKPEKIPSLRPAFKKDG-TVTAANATPLNDGAAALVIMSGEKAQELGLTPLARIRGFADAAQDPVEFTIAPSKAVPLALNHAGLQLSD 329
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Match: A0A7C7CWB0_9FLAO (Acetyl-CoA C-acyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7CWB0_9FLAO) HSP 1 Score: 366 bits (940), Expect = 6.330e-116 Identity = 186/310 (60.00%), Postives = 236/310 (76.13%), Query Frame = 2 Query: 776 KDAVIVSTARTAVGKFNGSMSALSGPQLGAIAIREAVARVPGLELEHVEEVFMGNVVSAGAGQAPARQAALFAGLPESVPCTTINKVCASGMKSVMLAAQSVSLAHRGVMVAGGFESMSNVPYYLPKARTGLRLGNGTLVDGIVHDGLWDVYNDHHMGICAEKCSVTYGIDREAQDKHATESYERAALAWDKGKFDEETVPVEIPSRRGSPTIISKDEEYTNIDLGKLTSLRPAFQREGGTVTAANASSLNDGAAALVLMSAARAEELGAKPLARIRGYGDAARAPVEFTVAPSDAVPVALKNAGISLED 1705
++ VI+S RT +G F G +++LS QLGA AI+EAV+R G+ E V+EVFMGNV+ AG GQAPARQAA+FAGL +VPCTT+NKVCASGMKS+ LAAQ++ +++AGG ESMSNVPYYLPKARTG RLG+G ++D L DVYN +HMG AE C+ I RE QDK A +SYER+A +W+ GKF EE VPVE+P RRG P ++ +DEEYTN+ + K+ L+P FQ++G TVTAANAS++NDGAAALVLMS +A ELG KPLA I+GY DAA+AP FT APS+A+P A++ AG+SL D
Sbjct: 2 REVVIISAVRTPMGSFGGCLASLSATQLGAAAIKEAVSRA-GISAESVQEVFMGNVLQAGEGQAPARQAAIFAGLSNNVPCTTVNKVCASGMKSITLAAQTIQCGDNDIVIAGGMESMSNVPYYLPKARTGYRLGDGLVLDXXXXXXLTDVYNKYHMGNAAELCASECNISREDQDKFAIQSYERSANSWENGKFKEEVVPVEVPQRRGDPILVDEDEEYTNVKIDKIPQLKPVFQKDG-TVTAANASTINDGAAALVLMSREKATELGLKPLASIKGYADAAKAPEWFTTAPSEALPKAVEKAGLSLND 309 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.625.1 >prot_C-linearis_contig10.625.1 ID=prot_C-linearis_contig10.625.1|Name=mRNA_C-linearis_contig10.625.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=512bp MVRQRGKAQQLVWLQDYGWLMLAVTHSHINLFLSSLSFSPLGLPRIHFCSback to top mRNA from alignment at C-linearis_contig10:2962207..2968636+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.625.1 ID=mRNA_C-linearis_contig10.625.1|Name=mRNA_C-linearis_contig10.625.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6430bp|location=Sequence derived from alignment at C-linearis_contig10:2962207..2968636+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2962207..2968636+ >mRNA_C-linearis_contig10.625.1 ID=mRNA_C-linearis_contig10.625.1|Name=mRNA_C-linearis_contig10.625.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3072bp|location=Sequence derived from alignment at C-linearis_contig10:2962207..2968636+ (Chordaria linearis ClinC8C monoicous)back to top |